AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030288.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030288.01.T01 MTR_6g004020 99.018 509 5 0 1 509 1 509 0.0 1038
MsG0680030288.01.T01 MTR_4g083340 77.959 490 108 0 20 509 7 496 0.0 811
MsG0680030288.01.T01 MTR_7g100760 77.551 490 110 0 20 509 10 499 0.0 803
MsG0680030288.01.T01 MTR_4g083330 74.898 490 96 2 20 509 10 472 0.0 739
MsG0680030288.01.T01 MTR_6g004030 78.261 276 18 4 544 784 33 301 6.73e-138 409
MsG0680030288.01.T01 MTR_7g103420 43.952 496 264 9 22 506 30 522 7.27e-128 392
MsG0680030288.01.T01 MTR_1g091040 42.828 495 270 7 22 506 30 521 5.08e-126 387
MsG0680030288.01.T01 MTR_7g103420 43.053 511 262 11 22 506 30 537 2.64e-125 386
MsG0680030288.01.T01 MTR_6g004030 90.909 209 12 2 544 752 33 234 1.11e-124 373
MsG0680030288.01.T01 MTR_1g061630 43.260 497 268 6 22 506 30 524 5.21e-123 379
MsG0680030288.01.T01 MTR_1g061630 43.058 497 253 7 22 506 30 508 4.81e-121 374
MsG0680030288.01.T01 MTR_7g103420 41.055 436 243 9 82 506 1 433 2.32e-99 315
MsG0680030288.01.T01 MTR_1g091040 42.975 363 201 5 148 506 28 388 5.57e-93 296
MsG0680030288.01.T01 MTR_1g099360 37.083 480 259 12 21 492 104 548 1.09e-82 275
MsG0680030288.01.T01 MTR_5g014140 37.421 473 267 11 21 492 78 522 2.49e-82 273
MsG0680030288.01.T01 MTR_6g034195 36.383 481 261 12 21 492 106 550 1.57e-81 272
MsG0680030288.01.T01 MTR_5g014140 41.846 325 179 6 21 341 78 396 2.95e-72 243
MsG0680030288.01.T01 MTR_1g076540 30.661 499 291 11 21 495 90 557 3.01e-70 241
MsG0680030288.01.T01 MTR_1g105965 31.911 492 297 11 21 499 91 557 4.29e-70 241
MsG0680030288.01.T01 MTR_1g105965 34.295 312 191 6 21 323 91 397 4.15e-53 190
MsG0680030288.01.T01 MTR_8g046180 28.777 278 154 5 551 784 41 318 4.42e-30 122
MsG0680030288.01.T01 MTR_8g046180 31.754 211 135 2 551 752 41 251 2.92e-29 119
MsG0680030288.01.T01 MTR_1g105965 30.093 216 138 5 21 228 91 301 2.40e-25 107
MsG0680030288.01.T01 MTR_8g046180 30.899 178 114 2 553 721 43 220 2.55e-22 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030288.01.T01 AT5G08570 88.016 509 61 0 1 509 1 509 0.0 942
MsG0680030288.01.T01 AT5G08570 88.016 509 61 0 1 509 1 509 0.0 942
MsG0680030288.01.T01 AT5G08570 88.016 509 61 0 1 509 1 509 0.0 942
MsG0680030288.01.T01 AT5G63680 86.837 509 67 0 1 509 1 509 0.0 928
MsG0680030288.01.T01 AT5G63680 86.837 509 67 0 1 509 1 509 0.0 928
MsG0680030288.01.T01 AT5G63680 86.837 509 67 0 1 509 1 509 0.0 928
MsG0680030288.01.T01 AT5G56350 79.388 490 101 0 20 509 8 497 0.0 812
MsG0680030288.01.T01 AT4G26390 77.755 490 109 0 20 509 7 496 0.0 795
MsG0680030288.01.T01 AT3G04050 69.565 506 149 4 6 506 1 506 0.0 721
MsG0680030288.01.T01 AT3G55650 68.127 502 156 3 12 509 8 509 0.0 698
MsG0680030288.01.T01 AT3G25960 69.400 500 140 4 12 509 8 496 0.0 697
MsG0680030288.01.T01 AT3G55810 66.327 490 143 4 21 506 17 488 0.0 650
MsG0680030288.01.T01 AT2G36580 44.646 495 262 8 22 506 30 522 3.31e-129 395
MsG0680030288.01.T01 AT3G52990 44.444 495 263 8 22 506 30 522 4.92e-129 395
MsG0680030288.01.T01 AT3G52990 43.100 471 256 8 46 506 1 469 1.00e-118 367
MsG0680030288.01.T01 AT5G08400 61.328 256 63 3 565 784 45 300 2.38e-108 333
MsG0680030288.01.T01 AT5G08400 54.325 289 63 4 565 784 45 333 1.60e-101 317
MsG0680030288.01.T01 AT1G32440 39.085 481 258 13 15 492 95 543 8.76e-85 281
MsG0680030288.01.T01 AT5G52920 35.560 509 285 12 21 528 111 577 2.01e-81 272
MsG0680030288.01.T01 AT3G22960 30.769 494 295 11 21 495 118 583 4.77e-69 239
MsG0680030288.01.T01 AT4G29400 32.474 194 96 2 626 784 109 302 7.55e-31 123
MsG0680030288.01.T01 AT3G49160 34.300 207 123 6 135 332 477 679 9.51e-20 94.7
MsG0680030288.01.T01 AT3G49160 34.300 207 123 6 135 332 389 591 9.68e-20 94.7

Find 238 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAAATTGTTTGTACTTT+GGG 0.213355 6:+83314 MsG0680030288.01.T01:CDS
GAGTTTCGCTCTGGCCTTAT+TGG 0.243879 6:-85426 None:intergenic
TTAGTATGTTTGTTATATTC+TGG 0.244376 6:+92342 MsG0680030288.01.T01:three_prime_UTR
TTTCAAATCTGATATTAAAA+TGG 0.254041 6:+92239 MsG0680030288.01.T01:three_prime_UTR
ATCCACTTGATTCATATATC+TGG 0.260074 6:+89048 MsG0680030288.01.T01:CDS
ACCCAAAGTACAAACAATTT+TGG 0.262629 6:-83315 None:intergenic
CAGAGGCTTGATTCCTATAT+TGG 0.264607 6:+85604 MsG0680030288.01.T01:CDS
CTTCAAGTTGGATTTGGATT+TGG 0.277771 6:-88179 None:intergenic
ATTATCCTTCAAGTTGGATT+TGG 0.279913 6:-88185 None:intergenic
TGTCCTTCTTTGAGTTGAAT+AGG 0.285375 6:-84254 None:intergenic
GTTGGATTTGGATTTGGATT+TGG 0.289278 6:-88173 None:intergenic
TATATTAAGCTGTGCCTTGC+TGG 0.290018 6:-85581 None:intergenic
GAAATTGATAAATCGATAAA+AGG 0.292161 6:+88214 MsG0680030288.01.T01:CDS
GACTTTCGTCGCTCCAAAAC+TGG 0.293871 6:+88629 MsG0680030288.01.T01:CDS
TATATCTGGTTTGAATTGTA+TGG 0.296023 6:+89062 MsG0680030288.01.T01:CDS
TCATTTCAAGGTTGAGAATC+AGG 0.297800 6:+84968 MsG0680030288.01.T01:intron
TGGATTAAATTATGTTATCT+TGG 0.304052 6:+92362 MsG0680030288.01.T01:three_prime_UTR
CATTAATTAGTTTGATGCTT+TGG 0.315044 6:+92286 MsG0680030288.01.T01:three_prime_UTR
GTGGTCGGTCCATGGGTGAT+TGG 0.323410 6:+91888 MsG0680030288.01.T01:CDS
GATCGCGACGTTAATCTAAT+TGG 0.338744 6:+89095 MsG0680030288.01.T01:CDS
GACCAAAATTGTTTGTACTT+TGG 0.339741 6:+83313 MsG0680030288.01.T01:CDS
CTACAATTCTTCAAACTTGC+AGG 0.343980 6:+89245 MsG0680030288.01.T01:CDS
GCAGAATCATCCCTTGATTA+TGG 0.346101 6:+85320 MsG0680030288.01.T01:CDS
TGCTGTACGCACAGCCAATA+AGG 0.350511 6:+85412 MsG0680030288.01.T01:CDS
GCCAGGAAAATCTTCTCAAC+TGG 0.350809 6:-85071 None:intergenic
GCAGTTGATCTCAAGGCTTC+TGG 0.352154 6:-92139 None:intergenic
GTTAATGTCCGCAAGGTTCT+CGG 0.353104 6:+84620 MsG0680030288.01.T01:CDS
GCAATCATATCAATATTGTT+AGG 0.355092 6:-84566 None:intergenic
CTGCAAGTTTGAAGAATTGT+AGG 0.357092 6:-89244 None:intergenic
TGCTCTTTCATTTGTTCGTA+AGG 0.360649 6:+84586 MsG0680030288.01.T01:CDS
ATTTATAAGTGTAATCTTGT+TGG 0.364853 6:+85107 MsG0680030288.01.T01:CDS
GTTGTTGCTCTTCATCGTAT+TGG 0.368033 6:+85731 MsG0680030288.01.T01:CDS
TTCATCCCTTCCACTCGATT+TGG 0.369684 6:+91979 MsG0680030288.01.T01:three_prime_UTR
TGGTATCCAACAAATTGTTT+TGG 0.371698 6:+91866 MsG0680030288.01.T01:CDS
TCTCTGAATGGCAGATATCT+TGG 0.380849 6:+91846 MsG0680030288.01.T01:intron
TGACCACAGACTCATTTGAT+TGG 0.381256 6:+85540 MsG0680030288.01.T01:CDS
GCAGATCCTTCTGCCAATAT+AGG 0.382735 6:-85617 None:intergenic
GGCAACAACAGATCCAGTTT+TGG 0.385284 6:-88642 None:intergenic
GGATTAAATTATGTTATCTT+GGG 0.388407 6:+92363 MsG0680030288.01.T01:three_prime_UTR
GAGCATAGAATGGTATTTCC+AGG 0.388661 6:-84365 None:intergenic
GCGGGTAATGGGTGCGAGTA+CGG 0.390447 6:+86641 MsG0680030288.01.T01:CDS
AGGAGGCATATTGCAATTAT+CGG 0.393039 6:-92419 None:intergenic
ACTTATTGCTCACGAGGGTA+TGG 0.394186 6:+86702 MsG0680030288.01.T01:CDS
TGATCATGGATTCAAGCATC+TGG 0.395013 6:-85151 None:intergenic
CTACATCAGTTGCTTCGGCT+CGG 0.397785 6:-85190 None:intergenic
GCCTTCACAATTACCCTGCT+TGG 0.401282 6:+88308 MsG0680030288.01.T01:CDS
AGGCTTTCCAATGGACTCAT+AGG 0.405256 6:-85380 None:intergenic
CTCGTTCCTTCATGAGTTGA+GGG 0.406081 6:-88486 None:intergenic
TTTAGTGATGAGAATAGAAT+AGG 0.407194 6:+92193 MsG0680030288.01.T01:three_prime_UTR
TGCTGGTGCCTCATCACTGC+AGG 0.408792 6:-85564 None:intergenic
GCGTGAGACTGATGCGTTCA+TGG 0.409117 6:+85019 MsG0680030288.01.T01:CDS
AAAATGGTGCATCAAAATAT+AGG 0.410603 6:+92255 MsG0680030288.01.T01:three_prime_UTR
AAGTACTTCAAGATATGAAC+AGG 0.410954 6:+91944 MsG0680030288.01.T01:exon
TCGGTACACCACATTTAGTA+TGG 0.415189 6:-92400 None:intergenic
CGGACTGGCTTTCTGAAAGA+TGG 0.416803 6:+84227 MsG0680030288.01.T01:CDS
ATGGTGGCCCGTGGTGATCT+TGG 0.421038 6:+85038 MsG0680030288.01.T01:CDS
TAACTCATTGATATCATCTC+TGG 0.422361 6:-84317 None:intergenic
AGAATCTACAGATGCAATTC+TGG 0.426172 6:+85655 MsG0680030288.01.T01:CDS
TAAGGAAGATATTCTTGAAT+GGG 0.428016 6:+84538 MsG0680030288.01.T01:CDS
TACATCAGTTGCTTCGGCTC+GGG 0.429321 6:-85189 None:intergenic
GATTTCATAATCAGTAGTTA+TGG 0.432621 6:-84285 None:intergenic
CTTAAGTCAGCAACACAAAA+GGG 0.437722 6:+85686 MsG0680030288.01.T01:CDS
AATCTTGTCTGTGGTAGTTC+CGG 0.438220 6:+85514 MsG0680030288.01.T01:CDS
TGGTCGGTCCATGGGTGATT+GGG 0.440212 6:+91889 MsG0680030288.01.T01:CDS
CCTTCACAATTACCCTGCTT+GGG 0.441292 6:+88309 MsG0680030288.01.T01:CDS
CGACCACCAAAACAATTTGT+TGG 0.441732 6:-91872 None:intergenic
CTGCCTGTCCACTTGAAGCC+TGG 0.442454 6:+84347 MsG0680030288.01.T01:CDS
TGTTGTGAAAGTGCGGGTAA+TGG 0.449950 6:+86629 MsG0680030288.01.T01:intron
AACTACTGATTATGAAATCA+AGG 0.451183 6:+84289 MsG0680030288.01.T01:CDS
CCTCTCTATGACTCAGATAA+GGG 0.452501 6:+90425 MsG0680030288.01.T01:CDS
GCTCACGAGGGTATGGGCTC+AGG 0.453498 6:+86709 MsG0680030288.01.T01:CDS
AGAAAGCCAGTCCGAATCTC+AGG 0.453908 6:-84218 None:intergenic
CAAATCCAAATCCAACTTGA+AGG 0.455598 6:+88180 MsG0680030288.01.T01:CDS
TAACCCTCTTAAGTTGTGCT+TGG 0.456619 6:+92078 MsG0680030288.01.T01:three_prime_UTR
AACTCACATCACTGATATCA+TGG 0.458380 6:-90472 None:intergenic
GTTGTGAAAGTGCGGGTAAT+GGG 0.458781 6:+86630 MsG0680030288.01.T01:intron
GGGATGACAAACCATGAGTA+TGG 0.459976 6:+91917 MsG0680030288.01.T01:CDS
GTAGCCAATGCAGTTCTTGA+TGG 0.460232 6:+85209 MsG0680030288.01.T01:CDS
AACACAGAACGAGTAGTAGA+AGG 0.460648 6:-88130 None:intergenic
TAATTAGTTTGATGCTTTGG+TGG 0.461567 6:+92289 MsG0680030288.01.T01:three_prime_UTR
TGAATATAGCACCATAATCA+AGG 0.462445 6:-85331 None:intergenic
AATGAGTCTGTGGTCAAAAC+CGG 0.463086 6:-85533 None:intergenic
CGGGTAATGGGTGCGAGTAC+GGG 0.465141 6:+86642 MsG0680030288.01.T01:CDS
CTGTCAAAACTCTGCAATGT+TGG 0.465660 6:+84451 MsG0680030288.01.T01:CDS
TCTTAAGTCAGCAACACAAA+AGG 0.468356 6:+85685 MsG0680030288.01.T01:CDS
ATTGGCTACATCAGTTGCTT+CGG 0.471027 6:-85195 None:intergenic
GGTATGTCATGGGTCGACTT+GGG 0.471237 6:+89220 MsG0680030288.01.T01:CDS
TCCTCTCTATGACTCAGATA+AGG 0.474063 6:+90424 MsG0680030288.01.T01:CDS
ATACTCTCTAAAGGTGACTT+TGG 0.475046 6:-88666 None:intergenic
CCAAGTTAGTTGCTAAGTAT+AGG 0.476764 6:+85480 MsG0680030288.01.T01:CDS
ACCCTCGTGAGCAATAAGTT+TGG 0.479018 6:-86698 None:intergenic
AATAGTTACTTAGCCCAAGC+AGG 0.479217 6:-88322 None:intergenic
TGGTATGTCATGGGTCGACT+TGG 0.479500 6:+89219 MsG0680030288.01.T01:CDS
GCAACCAAGCACAACTTAAG+AGG 0.484585 6:-92082 None:intergenic
CAAAAGGGGCTTTGTAAACC+TGG 0.486157 6:+85701 MsG0680030288.01.T01:CDS
TCCATTGCCTATGAGTCCAT+TGG 0.486716 6:+85373 MsG0680030288.01.T01:CDS
CAGGGGCCTGAGATTCGGAC+TGG 0.487007 6:+84212 MsG0680030288.01.T01:intron
TTAATGTCCGCAAGGTTCTC+GGG 0.488664 6:+84621 MsG0680030288.01.T01:CDS
ATCGTCATTATCCTTCAAGT+TGG 0.489640 6:-88191 None:intergenic
GGAACTACCACAGACAAGAT+TGG 0.490094 6:-85512 None:intergenic
ATGTTATCTTGGGCCACAAA+AGG 0.490904 6:+92373 MsG0680030288.01.T01:three_prime_UTR
GATAAATCGATAAAAGGATC+AGG 0.491583 6:+88220 MsG0680030288.01.T01:CDS
GCTTCGGCTCGGGTTGGCCG+AGG 0.492369 6:-85179 None:intergenic
TTGGTTGCCACTTGCCCGAT+AGG 0.493315 6:+92097 MsG0680030288.01.T01:three_prime_UTR
TGTCAAAACTCTGCAATGTT+GGG 0.494616 6:+84452 MsG0680030288.01.T01:CDS
ATAAGGAAGATATTCTTGAA+TGG 0.496374 6:+84537 MsG0680030288.01.T01:CDS
CACTCTTACTGACAAGGATA+AGG 0.497352 6:+84520 MsG0680030288.01.T01:CDS
TTTAAACCAAATCGAGTGGA+AGG 0.497369 6:-91985 None:intergenic
CTTATCCTTGTCAGTAAGAG+TGG 0.498847 6:-84519 None:intergenic
ACCGACTGTGTCATGCTTAG+TGG 0.500132 6:+85233 MsG0680030288.01.T01:CDS
CTATATTCAAAGAGATGATA+AGG 0.502593 6:+85345 MsG0680030288.01.T01:CDS
GGAAGATCCACCACAACACC+AGG 0.502856 6:-84497 None:intergenic
TCCATGGGTGATTGGGAAGA+GGG 0.507364 6:+91896 MsG0680030288.01.T01:CDS
TTTCCAGGCTTCAAGTGGAC+AGG 0.509567 6:-84350 None:intergenic
GTGCCCGTCTCCATACCCTA+TGG 0.510103 6:-86676 None:intergenic
TACCCATAGGGTATGGAGAC+GGG 0.510469 6:+86673 MsG0680030288.01.T01:CDS
AGATTAACGTCGCGATCAGA+TGG 0.511089 6:-89089 None:intergenic
GTCCATGGGTGATTGGGAAG+AGG 0.512718 6:+91895 MsG0680030288.01.T01:CDS
TGATAATACATACTCTCTAA+AGG 0.512928 6:-88675 None:intergenic
CTTAGTGGTGAAAGTGCTGC+TGG 0.513325 6:+85248 MsG0680030288.01.T01:CDS
AAATATGCCCTTGGATGAGA+TGG 0.513436 6:+92049 MsG0680030288.01.T01:three_prime_UTR
CAATCATATCAATATTGTTA+GGG 0.517496 6:-84565 None:intergenic
ACTGAACTACGTGCTGTACT+TGG 0.518691 6:+88448 MsG0680030288.01.T01:CDS
GCTCTTTCATTTGTTCGTAA+GGG 0.518972 6:+84587 MsG0680030288.01.T01:CDS
TGGTACTCATGAATATCATC+AGG 0.520603 6:+83415 MsG0680030288.01.T01:CDS
TGAACTTGCTGTCAAAATCA+TGG 0.526619 6:+85280 MsG0680030288.01.T01:CDS
CACGACAATGAGTTTCGCTC+TGG 0.526714 6:-85435 None:intergenic
AAGTCTGCTATGCATTCTAC+TGG 0.527158 6:+83455 MsG0680030288.01.T01:CDS
AATACCATTCTATGCTCTGA+TGG 0.528435 6:+84371 MsG0680030288.01.T01:CDS
TTCCATTCCAAGATCACCAC+GGG 0.528799 6:-85045 None:intergenic
TTCAAGATATGAACAGGGAC+TGG 0.529542 6:+91950 MsG0680030288.01.T01:exon
CTCTCTAAAGGTGACTTTGG+AGG 0.530558 6:-88663 None:intergenic
ACTCGTTCCTTCATGAGTTG+AGG 0.531698 6:-88487 None:intergenic
ATGTCGAACATAGACATTGA+AGG 0.535384 6:+83251 MsG0680030288.01.T01:CDS
CTTATTGCTCACGAGGGTAT+GGG 0.535751 6:+86703 MsG0680030288.01.T01:CDS
ATCTCAACAGATCTCGAAGC+AGG 0.538705 6:-83338 None:intergenic
ACAGACAAGATTGGAACTGC+TGG 0.538859 6:-85503 None:intergenic
CCAGGAAAATCTTCTCAACT+GGG 0.540531 6:-85070 None:intergenic
TTAGGAACACGACCATCGTT+AGG 0.541925 6:-83290 None:intergenic
CCTATACTTAGCAACTAACT+TGG 0.544461 6:-85480 None:intergenic
AAACCTATTCAACTCAAAGA+AGG 0.544786 6:+84251 MsG0680030288.01.T01:CDS
TGGCCGAGGAGACTTGATCA+TGG 0.546979 6:-85165 None:intergenic
TATTCAAGCATGGTATGTCA+TGG 0.547139 6:+89209 MsG0680030288.01.T01:CDS
TCAGTTGCTTCGGCTCGGGT+TGG 0.547204 6:-85185 None:intergenic
ATCTGGGTAGCAGTCACCAC+AGG 0.548128 6:-85134 None:intergenic
CAATCTCCCTGGTGTTGTGG+TGG 0.549734 6:+84490 MsG0680030288.01.T01:CDS
GCAGATGTCAAATTCGTCAA+TGG 0.550855 6:+90394 MsG0680030288.01.T01:intron
TTGTCCTGTGATCAAGAAGC+CGG 0.554022 6:+84413 MsG0680030288.01.T01:CDS
TAACTACTGAAGCGGTGGGT+GGG 0.554952 6:+83192 MsG0680030288.01.T01:five_prime_UTR
TGGTATTTCCAGGCTTCAAG+TGG 0.557830 6:-84355 None:intergenic
CACCAAACTTATTGCTCACG+AGG 0.559912 6:+86696 MsG0680030288.01.T01:CDS
TGCCCGTCTCCATACCCTAT+GGG 0.560068 6:-86675 None:intergenic
ACTCTGCAATGTTGGGTGAG+AGG 0.560793 6:+84459 MsG0680030288.01.T01:CDS
AGTACTTGTAACCATACTCA+TGG 0.562310 6:-91928 None:intergenic
CCCCTCTTCCCAATCACCCA+TGG 0.562425 6:-91897 None:intergenic
GTATGTCATGGGTCGACTTG+GGG 0.564827 6:+89221 MsG0680030288.01.T01:CDS
AACCAGATATATGAATCAAG+TGG 0.567513 6:-89050 None:intergenic
TGCGTACAGCAGATGATGCA+AGG 0.569708 6:-85400 None:intergenic
TTATACAGGTTATTCAAGCA+TGG 0.570039 6:+89199 MsG0680030288.01.T01:intron
AGAGCAACAACGGCTTCACC+AGG 0.570541 6:-85719 None:intergenic
TCCAATGGACTCATAGGCAA+TGG 0.571271 6:-85374 None:intergenic
GGTTCCATCAAGAACTGCAT+TGG 0.573593 6:-85213 None:intergenic
ATACGGTACGAGAATCCTAT+CGG 0.574355 6:-92112 None:intergenic
ACAGCGACATCTAACAGTAC+CGG 0.574440 6:-84432 None:intergenic
TTAAACCAAATCGAGTGGAA+GGG 0.575801 6:-91984 None:intergenic
GCATATTCAGTTGATGTCAA+AGG 0.575993 6:+84655 MsG0680030288.01.T01:CDS
TAAACAAACCATCTCATCCA+AGG 0.576487 6:-92057 None:intergenic
TGTTCCATCAGAGCATAGAA+TGG 0.578771 6:-84375 None:intergenic
ACTTAGATACCCATAGGGTA+TGG 0.578870 6:+86666 MsG0680030288.01.T01:CDS
TTGATTCCTATATTGGCAGA+AGG 0.579355 6:+85611 MsG0680030288.01.T01:CDS
AGCAGACTTGAGATTATCGA+GGG 0.582018 6:-83441 None:intergenic
GATAGGATTCTCGTACCGTA+TGG 0.582400 6:+92114 MsG0680030288.01.T01:three_prime_UTR
CGAGAATCCTATCGGGCAAG+TGG 0.583551 6:-92104 None:intergenic
TGTCAATCTCCCTGGTGTTG+TGG 0.583872 6:+84487 MsG0680030288.01.T01:CDS
ACGGGCACTTAGATACCCAT+AGG 0.584228 6:+86660 MsG0680030288.01.T01:CDS
CCCAAGCAGGGTAATTGTGA+AGG 0.584375 6:-88309 None:intergenic
TCAAGGCTTCTGGCTCCATA+CGG 0.586344 6:-92129 None:intergenic
TACGGTACGAGAATCCTATC+GGG 0.587080 6:-92111 None:intergenic
TGTCGAACATAGACATTGAA+GGG 0.588964 6:+83252 MsG0680030288.01.T01:CDS
TAGCTAACTACTGAAGCGGT+GGG 0.588983 6:+83188 MsG0680030288.01.T01:five_prime_UTR
GATCATGGATTCAAGCATCT+GGG 0.589960 6:-85150 None:intergenic
AACAAACGCAGTTGATCTCA+AGG 0.590469 6:-92146 None:intergenic
CTCATTGTCGTGCTGACACG+AGG 0.591073 6:+85446 MsG0680030288.01.T01:CDS
GGATCAGGAACCACTGCTAG+AGG 0.592027 6:+88235 MsG0680030288.01.T01:CDS
CTAGCTAACTACTGAAGCGG+TGG 0.592863 6:+83187 MsG0680030288.01.T01:five_prime_UTR
TTATCCTTGTCAGTAAGAGT+GGG 0.593774 6:-84518 None:intergenic
ATTCAAGCATGGTATGTCAT+GGG 0.596058 6:+89210 MsG0680030288.01.T01:CDS
AATCCATGATCAAGTCTCCT+CGG 0.597161 6:+85162 MsG0680030288.01.T01:CDS
TGGCAACCCTCAACTCATGA+AGG 0.599388 6:+88480 MsG0680030288.01.T01:CDS
TGATCTTGTTAATGTCCGCA+AGG 0.600121 6:+84613 MsG0680030288.01.T01:CDS
CTGATATCATGGAAAGATGA+CGG 0.600764 6:-90461 None:intergenic
CTAACTACTGAAGCGGTGGG+TGG 0.603474 6:+83191 MsG0680030288.01.T01:five_prime_UTR
TGATGAGAATAGAATAGGAG+TGG 0.604379 6:+92198 MsG0680030288.01.T01:three_prime_UTR
GGCCCGTGGTGATCTTGGAA+TGG 0.607650 6:+85043 MsG0680030288.01.T01:CDS
AGCAGTTCCAATCTTGTCTG+TGG 0.608373 6:+85505 MsG0680030288.01.T01:CDS
ACTACTGATTATGAAATCAA+GGG 0.609026 6:+84290 MsG0680030288.01.T01:CDS
TGCCGTCATGCTCGACACCA+AGG 0.609600 6:+83487 MsG0680030288.01.T01:CDS
CCCTTATCTGAGTCATAGAG+AGG 0.610008 6:-90425 None:intergenic
GATGATGCAAGGCTTTCCAA+TGG 0.615392 6:-85389 None:intergenic
GAATATAGCACCATAATCAA+GGG 0.615983 6:-85330 None:intergenic
GCTGTACTTGGTGATAGTAT+TGG 0.617009 6:+88460 MsG0680030288.01.T01:CDS
TATCTAGCTAACTACTGAAG+CGG 0.621098 6:+83184 MsG0680030288.01.T01:five_prime_UTR
AAGGAAGATATTCTTGAATG+GGG 0.623075 6:+84539 MsG0680030288.01.T01:CDS
TTGTCGTGCTGACACGAGGT+GGG 0.624494 6:+85450 MsG0680030288.01.T01:CDS
ACCACTAAGCATGACACAGT+CGG 0.629348 6:-85234 None:intergenic
CAACCAAGCACAACTTAAGA+GGG 0.631505 6:-92081 None:intergenic
TTCAAGGTTGAGAATCAGGA+GGG 0.631704 6:+84972 MsG0680030288.01.T01:intron
CCATGGGTGATTGGGAAGAG+GGG 0.632965 6:+91897 MsG0680030288.01.T01:CDS
AGTACCGGCTTCTTGATCAC+AGG 0.634918 6:-84417 None:intergenic
TTTCAAGGTTGAGAATCAGG+AGG 0.635083 6:+84971 MsG0680030288.01.T01:intron
TTAAGTCAGCAACACAAAAG+GGG 0.635960 6:+85687 MsG0680030288.01.T01:CDS
GATGCGTTCATGGTGGCCCG+TGG 0.637855 6:+85029 MsG0680030288.01.T01:CDS
AACTGAATATGCTTAGCATG+TGG 0.639472 6:-84644 None:intergenic
ATTGTCGTGCTGACACGAGG+TGG 0.639978 6:+85449 MsG0680030288.01.T01:CDS
GGTCCAATCAAATGAGTCTG+TGG 0.640580 6:-85543 None:intergenic
AAGGTGCACCATACTAAATG+TGG 0.640594 6:+92392 MsG0680030288.01.T01:three_prime_UTR
AAACAAACCATCTCATCCAA+GGG 0.641221 6:-92056 None:intergenic
ATTGATAAGAAATATGCCCT+TGG 0.644143 6:+92040 MsG0680030288.01.T01:three_prime_UTR
ATAGTTACTTAGCCCAAGCA+GGG 0.645735 6:-88321 None:intergenic
CGGGCACTTAGATACCCATA+GGG 0.646373 6:+86661 MsG0680030288.01.T01:CDS
TAGCAGACTTGAGATTATCG+AGG 0.648969 6:-83442 None:intergenic
TAATCTTCGACCTCTAGCAG+TGG 0.651203 6:-88245 None:intergenic
AACCTTGGTGTCGAGCATGA+CGG 0.653974 6:-83489 None:intergenic
ATACCCATAGGGTATGGAGA+CGG 0.655696 6:+86672 MsG0680030288.01.T01:CDS
TGATTGGACCTGCAGTGATG+AGG 0.656525 6:+85556 MsG0680030288.01.T01:CDS
TCTTCCCACTCTTACTGACA+AGG 0.660905 6:+84514 MsG0680030288.01.T01:CDS
AATACGATGAAGAGCAACAA+CGG 0.663617 6:-85729 None:intergenic
GCAGTGATGAGGCACCAGCA+AGG 0.676635 6:+85567 MsG0680030288.01.T01:CDS
TTGAATCAACTACCTAACGA+TGG 0.687429 6:+83278 MsG0680030288.01.T01:CDS
TAATCTTGTTGGCAAGCCTG+TGG 0.690354 6:+85118 MsG0680030288.01.T01:CDS
AGGCACAGCTTAATATACAG+AGG 0.690557 6:+85587 MsG0680030288.01.T01:CDS
TTTCCATTCCAAGATCACCA+CGG 0.695446 6:-85046 None:intergenic
ACCAAACTTATTGCTCACGA+GGG 0.704282 6:+86697 MsG0680030288.01.T01:CDS
TGAACGCATCAGTCTCACGC+AGG 0.710992 6:-85016 None:intergenic
AGTACTTCAAGATATGAACA+GGG 0.718298 6:+91945 MsG0680030288.01.T01:exon
TGAGACTGATGCGTTCATGG+TGG 0.741662 6:+85022 MsG0680030288.01.T01:CDS
GAAGATCCACCACAACACCA+GGG 0.757023 6:-84496 None:intergenic
CATGTGGCCCGAGAACCTTG+CGG 0.783590 6:-84628 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATATAAATAAAATTAT+TGG - Chr6:86434-86453 None:intergenic 0.0%
!! AAAAAAGATGTATATTTAAA+TGG + Chr6:91314-91333 MsG0680030288.01.T01:intron 10.0%
!! AAAAAGATGTATATTTAAAT+GGG + Chr6:91315-91334 MsG0680030288.01.T01:intron 10.0%
!! TAATATATCATGTATAAATA+GGG + Chr6:86224-86243 MsG0680030288.01.T01:intron 10.0%
!! TTTAATTAGAATTGAAAATA+AGG - Chr6:88551-88570 None:intergenic 10.0%
!!! ATCAAATTTTAAAAATAGAA+TGG - Chr6:87955-87974 None:intergenic 10.0%
!!! CAATTTTAATAATGATATAA+AGG + Chr6:84702-84721 MsG0680030288.01.T01:intron 10.0%
!!! GTTTAATTAATTTTACTTTT+TGG + Chr6:90259-90278 MsG0680030288.01.T01:intron 10.0%
!!! TAACATTTAAACTTTTTTTA+AGG + Chr6:87489-87508 MsG0680030288.01.T01:intron 10.0%
!!! TGTGTTTTTTTTTTTATTAT+TGG + Chr6:86818-86837 MsG0680030288.01.T01:intron 10.0%
!!! TTATTATTTCAATTTTTGTA+AGG + Chr6:83770-83789 MsG0680030288.01.T01:intron 10.0%
!! AAAAAAACACATTTATACAT+AGG - Chr6:86809-86828 None:intergenic 15.0%
!! AAAAAACACATTTATACATA+GGG - Chr6:86808-86827 None:intergenic 15.0%
!! AACAAAATAAAGCAAAAATA+AGG + Chr6:86068-86087 MsG0680030288.01.T01:intron 15.0%
!! ATTATATTGAAAAGTGAAAT+GGG - Chr6:87641-87660 None:intergenic 15.0%
!! GTAATATATCATGTATAAAT+AGG + Chr6:86223-86242 MsG0680030288.01.T01:intron 15.0%
!! GTTTAAAAAATGATATAAAG+AGG + Chr6:92001-92020 MsG0680030288.01.T01:three_prime_UTR 15.0%
!! TAGATAAATTGATCATATTT+CGG + Chr6:87029-87048 MsG0680030288.01.T01:intron 15.0%
!! TATTATATTGAAAAGTGAAA+TGG - Chr6:87642-87661 None:intergenic 15.0%
!! TCATTCATTAATTATTATAC+AGG + Chr6:89185-89204 MsG0680030288.01.T01:intron 15.0%
!! TGCATTATTGTATATATATA+TGG + Chr6:88372-88391 MsG0680030288.01.T01:intron 15.0%
!! TTTCAAATCTGATATTAAAA+TGG + Chr6:92239-92258 MsG0680030288.01.T01:three_prime_UTR 15.0%
!! TTTGAATTAAATACCAAAAT+TGG - Chr6:89433-89452 None:intergenic 15.0%
!!! AAAATTTCCTTACAAATTTT+AGG + Chr6:89968-89987 MsG0680030288.01.T01:intron 15.0%
!!! GTTTTTAAATAATGATTTTG+TGG + Chr6:84941-84960 MsG0680030288.01.T01:intron 15.0%
!!! TATTTTAGATGCTTTTTATT+TGG + Chr6:86510-86529 MsG0680030288.01.T01:intron 15.0%
!!! TTTGTTTTACAACAATTATT+TGG - Chr6:87549-87568 None:intergenic 15.0%
!!! TTTTAATATCAGATTTGAAA+TGG - Chr6:92239-92258 None:intergenic 15.0%
!! AAAAATGATATAAAGAGGTT+CGG + Chr6:92006-92025 MsG0680030288.01.T01:three_prime_UTR 20.0%
!! AAAGTCAATAAAAGCTATAA+AGG - Chr6:90947-90966 None:intergenic 20.0%
!! AAGAATTATAATATTCCAAG+AGG - Chr6:89575-89594 None:intergenic 20.0%
!! ACAAAATGATCACTTATTAT+GGG - Chr6:87591-87610 None:intergenic 20.0%
!! ACAATAAATATCAAAGACTT+AGG - Chr6:86471-86490 None:intergenic 20.0%
!! ACTCTAATTATTATTTGTCA+TGG + Chr6:89002-89021 MsG0680030288.01.T01:intron 20.0%
!! ACTTCAATTCTTTGTTAAAA+GGG - Chr6:90358-90377 None:intergenic 20.0%
!! ATATTATCCAAACAAAAATG+AGG + Chr6:88006-88025 MsG0680030288.01.T01:intron 20.0%
!! ATCTCTTTGTTAATATTTGT+TGG + Chr6:86955-86974 MsG0680030288.01.T01:intron 20.0%
!! ATTTATAAGTGTAATCTTGT+TGG + Chr6:85107-85126 MsG0680030288.01.T01:CDS 20.0%
!! CAATCATATCAATATTGTTA+GGG - Chr6:84568-84587 None:intergenic 20.0%
!! CATTTCACAAAAATGTATAA+AGG - Chr6:87806-87825 None:intergenic 20.0%
!! CTCTAATTATTATTTGTCAT+GGG + Chr6:89003-89022 MsG0680030288.01.T01:intron 20.0%
!! GAAATTGATAAATCGATAAA+AGG + Chr6:88214-88233 MsG0680030288.01.T01:CDS 20.0%
!! GGATTAAATTATGTTATCTT+GGG + Chr6:92363-92382 MsG0680030288.01.T01:three_prime_UTR 20.0%
!! TAAAGGAAAGAAAAAGAAAA+TGG - Chr6:87789-87808 None:intergenic 20.0%
!! TACAAAATGATCACTTATTA+TGG - Chr6:87592-87611 None:intergenic 20.0%
!! TACTTCAATTCTTTGTTAAA+AGG - Chr6:90359-90378 None:intergenic 20.0%
!! TATTAGTTGTTATACCTTAT+TGG + Chr6:89806-89825 MsG0680030288.01.T01:intron 20.0%
!! TCTCTTTGTTAATATTTGTT+GGG + Chr6:86956-86975 MsG0680030288.01.T01:intron 20.0%
!! TGGATTAAATTATGTTATCT+TGG + Chr6:92362-92381 MsG0680030288.01.T01:three_prime_UTR 20.0%
!! TTAAACTCATCTTAAAAGTT+AGG - Chr6:87461-87480 None:intergenic 20.0%
!! TTAGAAGATATATATCAACA+AGG - Chr6:84790-84809 None:intergenic 20.0%
!! TTGAAAAGTTGTTAATTGAA+GGG - Chr6:83720-83739 None:intergenic 20.0%
!! TTTAAGAAAAACATGCAAAT+AGG - Chr6:89900-89919 None:intergenic 20.0%
!! TTTGAAAAGTTGTTAATTGA+AGG - Chr6:83721-83740 None:intergenic 20.0%
!!! AATCAATTTTGTGTTTAATC+AGG + Chr6:83688-83707 MsG0680030288.01.T01:intron 20.0%
!!! ATATGACCAATAATTTTTCT+GGG - Chr6:91290-91309 None:intergenic 20.0%
!!! ATTATTAACGTTTTCATGTA+CGG + Chr6:84158-84177 MsG0680030288.01.T01:intron 20.0%
!!! ATTCTTGTTTATTGATAACT+AGG + Chr6:89724-89743 MsG0680030288.01.T01:intron 20.0%
!!! ATTGCTATATTTTGATGATA+TGG - Chr6:88728-88747 None:intergenic 20.0%
!!! CATTTTAAATGACATTTTTG+TGG + Chr6:86017-86036 MsG0680030288.01.T01:intron 20.0%
!!! CTTACTTGAACTAATTATTT+TGG - Chr6:89677-89696 None:intergenic 20.0%
!!! GCTTTTTATGAAATAGATTT+TGG + Chr6:87102-87121 MsG0680030288.01.T01:intron 20.0%
!!! TAAACTAGTAAAAAGGTTTT+AGG - Chr6:90721-90740 None:intergenic 20.0%
!!! TAAAGAGAACTTTTACATTA+TGG + Chr6:89916-89935 MsG0680030288.01.T01:intron 20.0%
!!! TAGATTTGATGATTTCATTA+AGG - Chr6:89366-89385 None:intergenic 20.0%
!!! TATTTTGTAAACATTCTGAT+AGG - Chr6:90206-90225 None:intergenic 20.0%
!!! TCATCAAATCTACTTTATTT+TGG + Chr6:89374-89393 MsG0680030288.01.T01:intron 20.0%
!!! TGAAGTATCTTTTTAATTGA+TGG + Chr6:90372-90391 MsG0680030288.01.T01:intron 20.0%
!!! TTAGTATGTTTGTTATATTC+TGG + Chr6:92342-92361 MsG0680030288.01.T01:three_prime_UTR 20.0%
!!! TTTTGACAAAAATTTGAACT+TGG + Chr6:87174-87193 MsG0680030288.01.T01:intron 20.0%
! AAAATGGTGCATCAAAATAT+AGG + Chr6:92255-92274 MsG0680030288.01.T01:three_prime_UTR 25.0%
! AAATTGATCATATTTCGGTA+AGG + Chr6:87034-87053 MsG0680030288.01.T01:intron 25.0%
! AACAATTAAATCGAATCACT+TGG + Chr6:87242-87261 MsG0680030288.01.T01:intron 25.0%
! AATTGATCATATTTCGGTAA+GGG + Chr6:87035-87054 MsG0680030288.01.T01:intron 25.0%
! ACCAAAATTGTTTGTACTTT+GGG + Chr6:83314-83333 MsG0680030288.01.T01:CDS 25.0%
! AGAAACCAAAGAGAAAAAAT+AGG + Chr6:91134-91153 MsG0680030288.01.T01:intron 25.0%
! ATAAAACTCATAAGCCAATT+GGG - Chr6:89515-89534 None:intergenic 25.0%
! ATAAGGAAGATATTCTTGAA+TGG + Chr6:84537-84556 MsG0680030288.01.T01:CDS 25.0%
! ATGGAATACTTAATTTAGGA+CGG + Chr6:87831-87850 MsG0680030288.01.T01:intron 25.0%
! ATTCAAAAACTTCTTAAAGC+TGG + Chr6:83362-83381 MsG0680030288.01.T01:CDS 25.0%
! CTATATTCAAAGAGATGATA+AGG + Chr6:85345-85364 MsG0680030288.01.T01:CDS 25.0%
! GAAACCAAAGAGAAAAAATA+GGG + Chr6:91135-91154 MsG0680030288.01.T01:intron 25.0%
! GAAGATAGAATTCGAAAAAA+GGG + Chr6:88602-88621 MsG0680030288.01.T01:CDS 25.0%
! GATTTCATAATCAGTAGTTA+TGG - Chr6:84288-84307 None:intergenic 25.0%
! GCAAATGGAATACTTAATTT+AGG + Chr6:87827-87846 MsG0680030288.01.T01:intron 25.0%
! GCAATCATATCAATATTGTT+AGG - Chr6:84569-84588 None:intergenic 25.0%
! GTTAACTTCTATTTCAACTT+CGG - Chr6:87133-87152 None:intergenic 25.0%
! TAAGCATGTAATGAATGAAT+GGG - Chr6:89278-89297 None:intergenic 25.0%
! TAAGGAAGATATTCTTGAAT+GGG + Chr6:84538-84557 MsG0680030288.01.T01:CDS 25.0%
! TACTCTGAGCTTAATTATTA+AGG - Chr6:91715-91734 None:intergenic 25.0%
! TAGCAATAAAATAGTCTGTA+AGG - Chr6:84079-84098 None:intergenic 25.0%
! TAGTAGATAGTAGTTTCAAT+GGG + Chr6:89616-89635 MsG0680030288.01.T01:intron 25.0%
! TATAAAACTCATAAGCCAAT+TGG - Chr6:89516-89535 None:intergenic 25.0%
! TATAGGCTAAACTAGTAAAA+AGG - Chr6:90728-90747 None:intergenic 25.0%
! TCAATTATGAGTATACCATT+CGG + Chr6:90967-90986 MsG0680030288.01.T01:intron 25.0%
! TCATATTAAACAGACAATCA+TGG - Chr6:84863-84882 None:intergenic 25.0%
! TGAATATTTCATAAAACTCC+CGG + Chr6:88797-88816 MsG0680030288.01.T01:intron 25.0%
! TGATAATACATACTCTCTAA+AGG - Chr6:88678-88697 None:intergenic 25.0%
! TGTTGAATCACATTTCTTTA+TGG - Chr6:87427-87446 None:intergenic 25.0%
! TTAAAAGTTAGGTCAAAGAA+TGG - Chr6:87450-87469 None:intergenic 25.0%
! TTAAGCATTTACTATGTATG+TGG - Chr6:88873-88892 None:intergenic 25.0%
! TTAGATGAACTCATTTAACA+TGG + Chr6:87295-87314 MsG0680030288.01.T01:intron 25.0%
! TTAGTAGATAGTAGTTTCAA+TGG + Chr6:89615-89634 MsG0680030288.01.T01:intron 25.0%
! TTTAGTGATGAGAATAGAAT+AGG + Chr6:92193-92212 MsG0680030288.01.T01:three_prime_UTR 25.0%
!! AACTACTGATTATGAAATCA+AGG + Chr6:84289-84308 MsG0680030288.01.T01:CDS 25.0%
!! ACTACTGATTATGAAATCAA+GGG + Chr6:84290-84309 MsG0680030288.01.T01:CDS 25.0%
!! ATTTAAAATGCAAGAAATGC+AGG - Chr6:86007-86026 None:intergenic 25.0%
!! ATTTTTGTGAAATGAGCAAA+TGG + Chr6:87812-87831 MsG0680030288.01.T01:intron 25.0%
!! CATTAATTAGTTTGATGCTT+TGG + Chr6:92286-92305 MsG0680030288.01.T01:three_prime_UTR 25.0%
!! GATATGACCAATAATTTTTC+TGG - Chr6:91291-91310 None:intergenic 25.0%
!! TATATCTGGTTTGAATTGTA+TGG + Chr6:89062-89081 MsG0680030288.01.T01:CDS 25.0%
!! TTGATGATTTCATTAAGGTA+AGG - Chr6:89361-89380 None:intergenic 25.0%
!! TTTTGTGGAATTTCATTTCA+AGG + Chr6:84956-84975 MsG0680030288.01.T01:intron 25.0%
!!! ATTTTTTAAACCAAATCGAG+TGG - Chr6:91992-92011 None:intergenic 25.0%
!!! CTGTTAGTCTTTTTAATAAG+TGG + Chr6:90536-90555 MsG0680030288.01.T01:intron 25.0%
!!! TAAATAGGTATTGAAAAGGA+GGG + Chr6:91440-91459 MsG0680030288.01.T01:intron 25.0%
!!! TTTAGCCTATAGTTTTTTTG+TGG + Chr6:90737-90756 MsG0680030288.01.T01:intron 25.0%
!!! TTTAGTTTTTTATTGCTGCA+AGG + Chr6:86106-86125 MsG0680030288.01.T01:intron 25.0%
AAACCTATTCAACTCAAAGA+AGG + Chr6:84251-84270 MsG0680030288.01.T01:CDS 30.0%
AAAGGAGAAACTAAATGATC+AGG - Chr6:90929-90948 None:intergenic 30.0%
AAATATGTTCAATGCAAGCA+GGG - Chr6:83557-83576 None:intergenic 30.0%
AACACATTTATACATAGGGA+TGG - Chr6:86804-86823 None:intergenic 30.0%
AACACCACAAACAAATGAAA+TGG - Chr6:84732-84751 None:intergenic 30.0%
AACCAGATATATGAATCAAG+TGG - Chr6:89053-89072 None:intergenic 30.0%
AAGAGAATCATAACTGTACA+AGG - Chr6:84106-84125 None:intergenic 30.0%
AAGCATGTAATGAATGAATG+GGG - Chr6:89277-89296 None:intergenic 30.0%
AAGGAAGATATTCTTGAATG+GGG + Chr6:84539-84558 MsG0680030288.01.T01:CDS 30.0%
AAGGACATGCAATTCATTAA+TGG - Chr6:84771-84790 None:intergenic 30.0%
AAGTACTTCAAGATATGAAC+AGG + Chr6:91944-91963 MsG0680030288.01.T01:exon 30.0%
AATAGAAGTTAACCATGGTA+TGG + Chr6:87140-87159 MsG0680030288.01.T01:intron 30.0%
ACTAAATAGCAAATACCTCT+TGG + Chr6:89557-89576 MsG0680030288.01.T01:intron 30.0%
ACTTGAAATTCCTCAAATTC+TGG + Chr6:89405-89424 MsG0680030288.01.T01:intron 30.0%
AGTACTTCAAGATATGAACA+GGG + Chr6:91945-91964 MsG0680030288.01.T01:exon 30.0%
ATAGAAACAACAACAAACCT+TGG - Chr6:83507-83526 None:intergenic 30.0%
ATAGCTACACTTCAAAAAGA+GGG - Chr6:89851-89870 None:intergenic 30.0%
ATATAATCAACTTCACCTAG+TGG + Chr6:91385-91404 MsG0680030288.01.T01:intron 30.0%
ATCACCATTTCATTTGTTTG+TGG + Chr6:84725-84744 MsG0680030288.01.T01:intron 30.0%
ATCCACTTGATTCATATATC+TGG + Chr6:89048-89067 MsG0680030288.01.T01:CDS 30.0%
ATGCAATTCATTAATGGTGA+AGG - Chr6:84765-84784 None:intergenic 30.0%
ATTGATAAGAAATATGCCCT+TGG + Chr6:92040-92059 MsG0680030288.01.T01:three_prime_UTR 30.0%
CCTACTATCAAATTTAGTTG+TGG - Chr6:88843-88862 None:intergenic 30.0%
CTTCACTCCTAAAATTTGTA+AGG - Chr6:89978-89997 None:intergenic 30.0%
GAATATAGCACCATAATCAA+GGG - Chr6:85333-85352 None:intergenic 30.0%
GACCAAAATTGTTTGTACTT+TGG + Chr6:83313-83332 MsG0680030288.01.T01:CDS 30.0%
GATAAATCGATAAAAGGATC+AGG + Chr6:88220-88239 MsG0680030288.01.T01:CDS 30.0%
GATTCGATTTAATTGTTCAG+TGG - Chr6:87239-87258 None:intergenic 30.0%
GCAGTAGAATATGAAAAACA+CGG + Chr6:91585-91604 MsG0680030288.01.T01:intron 30.0%
GCTAAGAAGAGTAAATCAAA+TGG - Chr6:90794-90813 None:intergenic 30.0%
GGAAGATAGAATTCGAAAAA+AGG + Chr6:88601-88620 MsG0680030288.01.T01:CDS 30.0%
GGTATAGTCTATATAATGTG+CGG - Chr6:86413-86432 None:intergenic 30.0%
GTAAGCATGTAATGAATGAA+TGG - Chr6:89279-89298 None:intergenic 30.0%
GTATAAATAGGGATGACAAT+TGG + Chr6:86235-86254 MsG0680030288.01.T01:intron 30.0%
GTATAGTCTATATAATGTGC+GGG - Chr6:86412-86431 None:intergenic 30.0%
GTTGAAATAGAAGTTAACCA+TGG + Chr6:87135-87154 MsG0680030288.01.T01:intron 30.0%
TAAATATGTTCAATGCAAGC+AGG - Chr6:83558-83577 None:intergenic 30.0%
TAACTCATTGATATCATCTC+TGG - Chr6:84320-84339 None:intergenic 30.0%
TAGAATATGAAAAACACGGT+AGG + Chr6:91589-91608 MsG0680030288.01.T01:intron 30.0%
TATAGCTACACTTCAAAAAG+AGG - Chr6:89852-89871 None:intergenic 30.0%
TATTGAAAAGTGAAATGGGT+CGG - Chr6:87637-87656 None:intergenic 30.0%
TCTTGTATTGTTTAGAGAGA+GGG + Chr6:91191-91210 MsG0680030288.01.T01:intron 30.0%
TGAATATAGCACCATAATCA+AGG - Chr6:85334-85353 None:intergenic 30.0%
TGAGACCACAAAAAAACTAT+AGG - Chr6:90745-90764 None:intergenic 30.0%
TGCAATTCATTAATGGTGAA+GGG - Chr6:84764-84783 None:intergenic 30.0%
TTATACAGGTTATTCAAGCA+TGG + Chr6:89199-89218 MsG0680030288.01.T01:intron 30.0%
TTATCCAAACAAAAATGAGG+AGG + Chr6:88009-88028 MsG0680030288.01.T01:intron 30.0%
TTCTCTTACTAAAACAACAC+AGG - Chr6:87978-87997 None:intergenic 30.0%
TTGAATTCAATCATCTTGCT+AGG + Chr6:87352-87371 MsG0680030288.01.T01:intron 30.0%
TTTAAACAAATCGTACTTGC+AGG + Chr6:91640-91659 MsG0680030288.01.T01:intron 30.0%
TTTCATGCTTCATATAGACA+GGG + Chr6:89763-89782 MsG0680030288.01.T01:intron 30.0%
! AATACTTAATTTAGGACGGA+GGG + Chr6:87835-87854 MsG0680030288.01.T01:intron 30.0%
! ACCCAAAGTACAAACAATTT+TGG - Chr6:83318-83337 None:intergenic 30.0%
! ATAAAATGCCTTTTCACTCT+AGG + Chr6:90634-90653 MsG0680030288.01.T01:intron 30.0%
! CAACTAGCTCGAAAATATTT+TGG + Chr6:90112-90131 MsG0680030288.01.T01:intron 30.0%
! CCACAACTAAATTTGATAGT+AGG + Chr6:88840-88859 MsG0680030288.01.T01:intron 30.0%
! CTTTTCAATACCTATTTAGC+TGG - Chr6:91438-91457 None:intergenic 30.0%
! GTATTGATCAGAGTTATAAG+TGG - Chr6:87679-87698 None:intergenic 30.0%
! GTTACTTTGAAGAGAAAGTT+GGG - Chr6:90902-90921 None:intergenic 30.0%
! TAATTAGTTTGATGCTTTGG+TGG + Chr6:92289-92308 MsG0680030288.01.T01:three_prime_UTR 30.0%
! TGGTATCCAACAAATTGTTT+TGG + Chr6:91866-91885 MsG0680030288.01.T01:CDS 30.0%
! TTACTTTGAAGAGAAAGTTG+GGG - Chr6:90901-90920 None:intergenic 30.0%
! TTGAACAAGTGATTTGTGTT+TGG + Chr6:83619-83638 MsG0680030288.01.T01:intron 30.0%
! TTTGACCATCTTTTCTGAAT+AGG + Chr6:90869-90888 MsG0680030288.01.T01:intron 30.0%
! TTTGAGGAATTTCAAGTCAA+CGG - Chr6:89402-89421 None:intergenic 30.0%
!! ATCTTTTTGTTGTGAAAGTG+CGG + Chr6:86622-86641 MsG0680030288.01.T01:intron 30.0%
!! ATTATCCTTCAAGTTGGATT+TGG - Chr6:88188-88207 None:intergenic 30.0%
!! CAGCTAAATAGGTATTGAAA+AGG + Chr6:91436-91455 MsG0680030288.01.T01:intron 30.0%
!! CTAAATAGGTATTGAAAAGG+AGG + Chr6:91439-91458 MsG0680030288.01.T01:intron 30.0%
!! CTCATTTTTCCTCTAACTAA+TGG + Chr6:90761-90780 MsG0680030288.01.T01:intron 30.0%
!! GTACAAACAATTTTGGTCTT+AGG - Chr6:83311-83330 None:intergenic 30.0%
!! TATTTTGCTCTGAATGAACT+CGG + Chr6:85926-85945 MsG0680030288.01.T01:intron 30.0%
!!! AGTGAAAAGGCATTTTATTG+TGG - Chr6:90632-90651 None:intergenic 30.0%
!!! TATCCAACAAATTGTTTTGG+TGG + Chr6:91869-91888 MsG0680030288.01.T01:CDS 30.0%
!!! TTTTTTGTCTGTAGACAAAG+TGG + Chr6:83976-83995 MsG0680030288.01.T01:intron 30.0%
AAAAACAATAAATGCGCGCT+TGG - Chr6:91800-91819 None:intergenic 35.0%
AAACAAACCATCTCATCCAA+GGG - Chr6:92059-92078 None:intergenic 35.0%
AACAATCTTTAGCCATACCA+TGG - Chr6:87155-87174 None:intergenic 35.0%
AACTCACATCACTGATATCA+TGG - Chr6:90475-90494 None:intergenic 35.0%
AACTGAATATGCTTAGCATG+TGG - Chr6:84647-84666 None:intergenic 35.0%
AACTTGTATCAGAAGAGACA+TGG - Chr6:90165-90184 None:intergenic 35.0%
AAGTAGCAAATGAAAGTGAG+GGG - Chr6:89318-89337 None:intergenic 35.0%
AATACCATTCTATGCTCTGA+TGG + Chr6:84371-84390 MsG0680030288.01.T01:CDS 35.0%
AATACGATGAAGAGCAACAA+CGG - Chr6:85732-85751 None:intergenic 35.0%
AATAGCAAGAACAGCAACAA+TGG + Chr6:90222-90241 MsG0680030288.01.T01:intron 35.0%
ACAATTGACTATTCTCCATC+TGG - Chr6:91251-91270 None:intergenic 35.0%
AGAAACTAAATGATCAGGAG+TGG - Chr6:90924-90943 None:intergenic 35.0%
AGAAGTAGCAAATGAAAGTG+AGG - Chr6:89320-89339 None:intergenic 35.0%
AGAATCTACAGATGCAATTC+TGG + Chr6:85655-85674 MsG0680030288.01.T01:CDS 35.0%
AGTACTTGTAACCATACTCA+TGG - Chr6:91931-91950 None:intergenic 35.0%
ATCGTCATTATCCTTCAAGT+TGG - Chr6:88194-88213 None:intergenic 35.0%
ATGAAAAGCTCAGTCCAATA+AGG - Chr6:89823-89842 None:intergenic 35.0%
ATGTCGAACATAGACATTGA+AGG + Chr6:83251-83270 MsG0680030288.01.T01:CDS 35.0%
ATGTGAGTTCCAGGATAATT+GGG + Chr6:90486-90505 MsG0680030288.01.T01:intron 35.0%
ATTAAGCACGACTTCAGAAT+TGG - Chr6:84920-84939 None:intergenic 35.0%
ATTCAAGCATGGTATGTCAT+GGG + Chr6:89210-89229 MsG0680030288.01.T01:CDS 35.0%
ATTTAGACATGTGTGTACTG+AGG - Chr6:90836-90855 None:intergenic 35.0%
CAAATCCAAATCCAACTTGA+AGG + Chr6:88180-88199 MsG0680030288.01.T01:CDS 35.0%
CAATTCATTAATGGTGAAGG+GGG - Chr6:84762-84781 None:intergenic 35.0%
CACACATGTCTAAATTACCT+AGG + Chr6:90841-90860 MsG0680030288.01.T01:intron 35.0%
CAGCTAAATCCTCCATTATA+TGG - Chr6:85890-85909 None:intergenic 35.0%
CCAAGTTAGTTGCTAAGTAT+AGG + Chr6:85480-85499 MsG0680030288.01.T01:CDS 35.0%
CCTATACTTAGCAACTAACT+TGG - Chr6:85483-85502 None:intergenic 35.0%
CTAAATCCTCCATTATATGG+TGG - Chr6:85887-85906 None:intergenic 35.0%
CTACAATTCTTCAAACTTGC+AGG + Chr6:89245-89264 MsG0680030288.01.T01:CDS 35.0%
CTGATATCATGGAAAGATGA+CGG - Chr6:90464-90483 None:intergenic 35.0%
CTGCAAGTTTGAAGAATTGT+AGG - Chr6:89247-89266 None:intergenic 35.0%
CTTAAGTCAGCAACACAAAA+GGG + Chr6:85686-85705 MsG0680030288.01.T01:CDS 35.0%
CTTGTATTGTTTAGAGAGAG+GGG + Chr6:91192-91211 MsG0680030288.01.T01:intron 35.0%
CTTTCATGCTTCATATAGAC+AGG + Chr6:89762-89781 MsG0680030288.01.T01:intron 35.0%
GAAGTAGCAAATGAAAGTGA+GGG - Chr6:89319-89338 None:intergenic 35.0%
GCAATTCATTAATGGTGAAG+GGG - Chr6:84763-84782 None:intergenic 35.0%
GCTCTTTCATTTGTTCGTAA+GGG + Chr6:84587-84606 MsG0680030288.01.T01:CDS 35.0%
GGAGAAAATCCATTAGTTAG+AGG - Chr6:90773-90792 None:intergenic 35.0%
GGAGAATAGTCAATTGTTAG+AGG + Chr6:91254-91273 MsG0680030288.01.T01:intron 35.0%
GGGATATCATTAGACTTGAT+TGG + Chr6:91335-91354 MsG0680030288.01.T01:intron 35.0%
GTCTTGTATTGTTTAGAGAG+AGG + Chr6:91190-91209 MsG0680030288.01.T01:intron 35.0%
GTTGGATTTGGATTTGGATT+TGG - Chr6:88176-88195 None:intergenic 35.0%
TAAACAAACCATCTCATCCA+AGG - Chr6:92060-92079 None:intergenic 35.0%
TAATTGCCCGCAAATTTGAA+CGG + Chr6:86341-86360 MsG0680030288.01.T01:intron 35.0%
TATCTAGCTAACTACTGAAG+CGG + Chr6:83184-83203 MsG0680030288.01.T01:five_prime_UTR 35.0%
TATTCAAGCATGGTATGTCA+TGG + Chr6:89209-89228 MsG0680030288.01.T01:CDS 35.0%
TCACCTAGTGGAAAAAACAA+AGG + Chr6:91397-91416 MsG0680030288.01.T01:intron 35.0%
TCATTCGTCTATGACTTTGT+GGG + Chr6:88748-88767 MsG0680030288.01.T01:intron 35.0%
TCATTTCAAGGTTGAGAATC+AGG + Chr6:84968-84987 MsG0680030288.01.T01:intron 35.0%
TCTCTTCTGATACAAGTTCT+AGG + Chr6:90167-90186 MsG0680030288.01.T01:intron 35.0%
TCTTAAGTCAGCAACACAAA+AGG + Chr6:85685-85704 MsG0680030288.01.T01:CDS 35.0%
TGAGTATACCATTCGGAAAA+AGG + Chr6:90974-90993 MsG0680030288.01.T01:intron 35.0%
TGATGAGAATAGAATAGGAG+TGG + Chr6:92198-92217 MsG0680030288.01.T01:three_prime_UTR 35.0%
TGCTCTTTCATTTGTTCGTA+AGG + Chr6:84586-84605 MsG0680030288.01.T01:CDS 35.0%
TGGTACTCATGAATATCATC+AGG + Chr6:83415-83434 MsG0680030288.01.T01:CDS 35.0%
TGTCAAAACTCTGCAATGTT+GGG + Chr6:84452-84471 MsG0680030288.01.T01:CDS 35.0%
TGTCGAACATAGACATTGAA+GGG + Chr6:83252-83271 MsG0680030288.01.T01:CDS 35.0%
TTAAACCAAATCGAGTGGAA+GGG - Chr6:91987-92006 None:intergenic 35.0%
TTAAGTCAGCAACACAAAAG+GGG + Chr6:85687-85706 MsG0680030288.01.T01:CDS 35.0%
TTATACATAGGGATGGCAAT+GGG - Chr6:86797-86816 None:intergenic 35.0%
TTATCCTTGTCAGTAAGAGT+GGG - Chr6:84521-84540 None:intergenic 35.0%
TTCATTCGTCTATGACTTTG+TGG + Chr6:88747-88766 MsG0680030288.01.T01:intron 35.0%
TTCTATACATGCATAGCACA+GGG + Chr6:83521-83540 MsG0680030288.01.T01:intron 35.0%
TTGAATCAACTACCTAACGA+TGG + Chr6:83278-83297 MsG0680030288.01.T01:CDS 35.0%
TTGACATTGACAATTGAGCT+AGG - Chr6:83796-83815 None:intergenic 35.0%
TTGATTCCTATATTGGCAGA+AGG + Chr6:85611-85630 MsG0680030288.01.T01:CDS 35.0%
TTGATTGGCACAAAACATTG+CGG + Chr6:91350-91369 MsG0680030288.01.T01:intron 35.0%
TTGATTTACTCTTCTTAGCG+CGG + Chr6:90795-90814 MsG0680030288.01.T01:intron 35.0%
TTTAAACCAAATCGAGTGGA+AGG - Chr6:91988-92007 None:intergenic 35.0%
TTTAACATGGCATTTGAGCT+AGG + Chr6:87308-87327 MsG0680030288.01.T01:intron 35.0%
TTTATACATAGGGATGGCAA+TGG - Chr6:86798-86817 None:intergenic 35.0%
TTTCTATACATGCATAGCAC+AGG + Chr6:83520-83539 MsG0680030288.01.T01:intron 35.0%
TTTGGATTGTCTGATTGCTT+CGG + Chr6:90277-90296 MsG0680030288.01.T01:intron 35.0%
! AAATCATCATTTTCTGTGCC+AGG - Chr6:85091-85110 None:intergenic 35.0%
! AGTCAATTGTTAGAGGTACA+GGG + Chr6:91261-91280 MsG0680030288.01.T01:intron 35.0%
! ATACTCTCTAAAGGTGACTT+TGG - Chr6:88669-88688 None:intergenic 35.0%
! ATGCACAATGTGTTATTAGC+TGG + Chr6:85790-85809 MsG0680030288.01.T01:intron 35.0%
! ATTTAGCTGTTAGCAGGTTT+TGG + Chr6:85901-85920 MsG0680030288.01.T01:intron 35.0%
! ATTTTCTTAAAACGCGAGTG+TGG + Chr6:86739-86758 MsG0680030288.01.T01:intron 35.0%
! CGTTTTTACAAGCATCTTCA+AGG - Chr6:88426-88445 None:intergenic 35.0%
! CTTTAGCATCCTTTCTCTTT+TGG - Chr6:91166-91185 None:intergenic 35.0%
! GAATACTTAATTTAGGACGG+AGG + Chr6:87834-87853 MsG0680030288.01.T01:intron 35.0%
! GCATATTCAGTTGATGTCAA+AGG + Chr6:84655-84674 MsG0680030288.01.T01:CDS 35.0%
! GCTACTTCTTCAGTTCTTTT+AGG + Chr6:89331-89350 MsG0680030288.01.T01:intron 35.0%
! GCTCGTTTCAATTTTTCACA+TGG + Chr6:83395-83414 MsG0680030288.01.T01:CDS 35.0%
! GGTTACTTTGAAGAGAAAGT+TGG - Chr6:90903-90922 None:intergenic 35.0%
! TAGTCAATTGTTAGAGGTAC+AGG + Chr6:91260-91279 MsG0680030288.01.T01:intron 35.0%
! TCAAATTCTGGCACCAATTT+TGG + Chr6:89417-89436 MsG0680030288.01.T01:intron 35.0%
! TGGGAGACTTTGTTTATTGT+GGG + Chr6:86184-86203 MsG0680030288.01.T01:intron 35.0%
! TTGGGAGACTTTGTTTATTG+TGG + Chr6:86183-86202 MsG0680030288.01.T01:intron 35.0%
! TTTTCTTAAAACGCGAGTGT+GGG + Chr6:86740-86759 MsG0680030288.01.T01:intron 35.0%
!! AAAATTGGTGCCAGAATTTG+AGG - Chr6:89418-89437 None:intergenic 35.0%
!! AATTCTGAAGTCGTGCTTAA+TGG + Chr6:84919-84938 MsG0680030288.01.T01:intron 35.0%
!! AGAGATGAGAGTATTACGAT+AGG + Chr6:91065-91084 MsG0680030288.01.T01:intron 35.0%
!! ATGATTTTGACAGCAAGTTC+AGG - Chr6:85281-85300 None:intergenic 35.0%
!! CTTCAAGTTGGATTTGGATT+TGG - Chr6:88182-88201 None:intergenic 35.0%
!! CTTTCCTCCTCATTTTTGTT+TGG - Chr6:88016-88035 None:intergenic 35.0%
!! TACTGTACTGTGTTTTTGCA+GGG + Chr6:84194-84213 MsG0680030288.01.T01:intron 35.0%
!! TCTTTTTGTTGTGAAAGTGC+GGG + Chr6:86623-86642 MsG0680030288.01.T01:intron 35.0%
!! TGAACTTGCTGTCAAAATCA+TGG + Chr6:85280-85299 MsG0680030288.01.T01:CDS 35.0%
!! TGATTTTGACAGCAAGTTCA+GGG - Chr6:85280-85299 None:intergenic 35.0%
!! TGTCCTTCTTTGAGTTGAAT+AGG - Chr6:84257-84276 None:intergenic 35.0%
!!! AAGCCTTTGTTTTTTCCACT+AGG - Chr6:91403-91422 None:intergenic 35.0%
!!! AGTTTTTTATTGCTGCAAGG+AGG + Chr6:86109-86128 MsG0680030288.01.T01:intron 35.0%
!!! CAACAAATTGTTTTGGTGGT+CGG + Chr6:91873-91892 MsG0680030288.01.T01:CDS 35.0%
!!! GCTACCCTATTTTTTCTCTT+TGG - Chr6:91142-91161 None:intergenic 35.0%
!!! TTTTTAGTTTCCAACCTGTG+TGG + Chr6:90327-90346 MsG0680030288.01.T01:intron 35.0%
!!! TTTTTTGTCTGTAGACAACG+CGG - Chr6:83898-83917 None:intergenic 35.0%
AAACAAATCGTACTTGCAGG+TGG + Chr6:91643-91662 MsG0680030288.01.T01:intron 40.0%
AAATATGCCCTTGGATGAGA+TGG + Chr6:92049-92068 MsG0680030288.01.T01:three_prime_UTR 40.0%
AACAAACGCAGTTGATCTCA+AGG - Chr6:92149-92168 None:intergenic 40.0%
AACACAGAACGAGTAGTAGA+AGG - Chr6:88133-88152 None:intergenic 40.0%
AAGATGGTCAAACTAGTCCT+AGG - Chr6:90861-90880 None:intergenic 40.0%
AAGGTGCACCATACTAAATG+TGG + Chr6:92392-92411 MsG0680030288.01.T01:three_prime_UTR 40.0%
AAGTCACACAAACGACTGTA+AGG + Chr6:84021-84040 MsG0680030288.01.T01:intron 40.0%
AAGTCTGCTATGCATTCTAC+TGG + Chr6:83455-83474 MsG0680030288.01.T01:CDS 40.0%
AATAGTTACTTAGCCCAAGC+AGG - Chr6:88325-88344 None:intergenic 40.0%
AATCCATGATCAAGTCTCCT+CGG + Chr6:85162-85181 MsG0680030288.01.T01:CDS 40.0%
AATCTTGTCTGTGGTAGTTC+CGG + Chr6:85514-85533 MsG0680030288.01.T01:CDS 40.0%
AATGAGTCTGTGGTCAAAAC+CGG - Chr6:85536-85555 None:intergenic 40.0%
AATTCTATCTTCCACCTGGA+AGG - Chr6:88594-88613 None:intergenic 40.0%
AATTGCCCGCAAATTTGAAC+GGG + Chr6:86342-86361 MsG0680030288.01.T01:intron 40.0%
ACAATTGGACCCAAACCAAA+TGG + Chr6:86250-86269 MsG0680030288.01.T01:intron 40.0%
ACCAAACTTATTGCTCACGA+GGG + Chr6:86697-86716 MsG0680030288.01.T01:CDS 40.0%
ACTCATAAGCCAATTGGGTT+CGG - Chr6:89510-89529 None:intergenic 40.0%
ACTTAGATACCCATAGGGTA+TGG + Chr6:86666-86685 MsG0680030288.01.T01:CDS 40.0%
AGAAAGTGAGATGAGTAGCA+TGG + Chr6:88042-88061 MsG0680030288.01.T01:intron 40.0%
AGCAGACTTGAGATTATCGA+GGG - Chr6:83444-83463 None:intergenic 40.0%
AGCCTCCTATTCAGAAAAGA+TGG - Chr6:90877-90896 None:intergenic 40.0%
AGGAAAAATGTCAATCTCCC+TGG + Chr6:84479-84498 MsG0680030288.01.T01:CDS 40.0%
AGGCACAGCTTAATATACAG+AGG + Chr6:85587-85606 MsG0680030288.01.T01:CDS 40.0%
AGTAGCAAATGAAAGTGAGG+GGG - Chr6:89317-89336 None:intergenic 40.0%
ATACGGTACGAGAATCCTAT+CGG - Chr6:92115-92134 None:intergenic 40.0%
ATAGTTACTTAGCCCAAGCA+GGG - Chr6:88324-88343 None:intergenic 40.0%
ATATCAGTGATGTGAGTTCC+AGG + Chr6:90477-90496 MsG0680030288.01.T01:intron 40.0%
ATCTGGTCTATCCTTCATAC+CGG - Chr6:91234-91253 None:intergenic 40.0%
ATGACTGACCTTTCTCTGAA+TGG + Chr6:91834-91853 MsG0680030288.01.T01:intron 40.0%
ATGGTTGTCACCAGCTAAAT+AGG + Chr6:91425-91444 MsG0680030288.01.T01:intron 40.0%
ATGTTATCTTGGGCCACAAA+AGG + Chr6:92373-92392 MsG0680030288.01.T01:three_prime_UTR 40.0%
ATTATCGTGGCATTGTCTCT+TGG + Chr6:90998-91017 MsG0680030288.01.T01:intron 40.0%
ATTGGCTACATCAGTTGCTT+CGG - Chr6:85198-85217 None:intergenic 40.0%
CAACCAAGCACAACTTAAGA+GGG - Chr6:92084-92103 None:intergenic 40.0%
CAATTGGACCCAAACCAAAT+GGG + Chr6:86251-86270 MsG0680030288.01.T01:intron 40.0%
CACTCTTACTGACAAGGATA+AGG + Chr6:84520-84539 MsG0680030288.01.T01:CDS 40.0%
CACTTATTATGGGACAGAGA+GGG - Chr6:87581-87600 None:intergenic 40.0%
CAGAGGCTTGATTCCTATAT+TGG + Chr6:85604-85623 MsG0680030288.01.T01:CDS 40.0%
CCAGGAAAATCTTCTCAACT+GGG - Chr6:85073-85092 None:intergenic 40.0%
CCATCAATATCATGTTGCTG+AGG + Chr6:83926-83945 MsG0680030288.01.T01:intron 40.0%
CCTCAGCAACATGATATTGA+TGG - Chr6:83929-83948 None:intergenic 40.0%
CCTCTCTATGACTCAGATAA+GGG + Chr6:90425-90444 MsG0680030288.01.T01:CDS 40.0%
CGACCACCAAAACAATTTGT+TGG - Chr6:91875-91894 None:intergenic 40.0%
CTCTTAGAATTTGACAGAGC+CGG - Chr6:88819-88838 None:intergenic 40.0%
CTGTCAAAACTCTGCAATGT+TGG + Chr6:84451-84470 MsG0680030288.01.T01:CDS 40.0%
CTTATCCTTGTCAGTAAGAG+TGG - Chr6:84522-84541 None:intergenic 40.0%
GAGCATAGAATGGTATTTCC+AGG - Chr6:84368-84387 None:intergenic 40.0%
GATATCTGCCATTCAGAGAA+AGG - Chr6:91845-91864 None:intergenic 40.0%
GATCATGGATTCAAGCATCT+GGG - Chr6:85153-85172 None:intergenic 40.0%
GATCGCGACGTTAATCTAAT+TGG + Chr6:89095-89114 MsG0680030288.01.T01:CDS 40.0%
GATGTGAGTTCCAGGATAAT+TGG + Chr6:90485-90504 MsG0680030288.01.T01:intron 40.0%
GCAGAATCATCCCTTGATTA+TGG + Chr6:85320-85339 MsG0680030288.01.T01:CDS 40.0%
GCAGATGTCAAATTCGTCAA+TGG + Chr6:90394-90413 MsG0680030288.01.T01:intron 40.0%
GCTGTTTGTCCACCATATAA+TGG + Chr6:85875-85894 MsG0680030288.01.T01:intron 40.0%
GGAAAAAACAAAGGCTTCGA+TGG + Chr6:91406-91425 MsG0680030288.01.T01:intron 40.0%
GGAGTGAAGTTTATGTGTTG+AGG + Chr6:89989-90008 MsG0680030288.01.T01:intron 40.0%
GGGAAAACTAGTTGAAACAC+CGG + Chr6:91212-91231 MsG0680030288.01.T01:intron 40.0%
GGGAGACCCAGAAAAATTAT+TGG + Chr6:91281-91300 MsG0680030288.01.T01:intron 40.0%
GTTGTTGCTCTTCATCGTAT+TGG + Chr6:85731-85750 MsG0680030288.01.T01:CDS 40.0%
GTTTGTCCACCATATAATGG+AGG + Chr6:85878-85897 MsG0680030288.01.T01:intron 40.0%
TAGCAGACTTGAGATTATCG+AGG - Chr6:83445-83464 None:intergenic 40.0%
TAGTTGAAACACCGGTATGA+AGG + Chr6:91220-91239 MsG0680030288.01.T01:intron 40.0%
TATATTAAGCTGTGCCTTGC+TGG - Chr6:85584-85603 None:intergenic 40.0%
TCACTTATTATGGGACAGAG+AGG - Chr6:87582-87601 None:intergenic 40.0%
TCCTCTCTATGACTCAGATA+AGG + Chr6:90424-90443 MsG0680030288.01.T01:CDS 40.0%
TCGGTACACCACATTTAGTA+TGG - Chr6:92403-92422 None:intergenic 40.0%
TCGTTTGTGTGACTTTCAAG+TGG - Chr6:84016-84035 None:intergenic 40.0%
TCTATATAATGTGCGGGCAT+GGG - Chr6:86406-86425 None:intergenic 40.0%
TCTCTACTACAATGCTTGCT+TGG - Chr6:89472-89491 None:intergenic 40.0%
TCTCTGAATGGCAGATATCT+TGG + Chr6:91846-91865 MsG0680030288.01.T01:intron 40.0%
TCTTAGAATTTGACAGAGCC+GGG - Chr6:88818-88837 None:intergenic 40.0%
TGACCACAGACTCATTTGAT+TGG + Chr6:85540-85559 MsG0680030288.01.T01:CDS 40.0%
TGATCATGGATTCAAGCATC+TGG - Chr6:85154-85173 None:intergenic 40.0%
TGATCTTGTTAATGTCCGCA+AGG + Chr6:84613-84632 MsG0680030288.01.T01:CDS 40.0%
TGGCATTTGAGCTAGGTTAA+TGG + Chr6:87315-87334 MsG0680030288.01.T01:intron 40.0%
TGTCCAAGTTGTACTAGGTA+CGG + Chr6:89640-89659 MsG0680030288.01.T01:intron 40.0%
TGTGAGTTCCAGGATAATTG+GGG + Chr6:90487-90506 MsG0680030288.01.T01:intron 40.0%
TGTTCCATCAGAGCATAGAA+TGG - Chr6:84378-84397 None:intergenic 40.0%
TTCAAGATATGAACAGGGAC+TGG + Chr6:91950-91969 MsG0680030288.01.T01:exon 40.0%
TTCAAGGTTGAGAATCAGGA+GGG + Chr6:84972-84991 MsG0680030288.01.T01:intron 40.0%
TTCGAATTCTATCTTCCACC+TGG - Chr6:88598-88617 None:intergenic 40.0%
TTTCAAGGTTGAGAATCAGG+AGG + Chr6:84971-84990 MsG0680030288.01.T01:intron 40.0%
TTTCCATTCCAAGATCACCA+CGG - Chr6:85049-85068 None:intergenic 40.0%
TTTCTTAAAACGCGAGTGTG+GGG + Chr6:86741-86760 MsG0680030288.01.T01:intron 40.0%
! AAATGCCTTTTCACTCTAGG+AGG + Chr6:90637-90656 MsG0680030288.01.T01:intron 40.0%
! CAGTTGAGAAGCACATCAAT+CGG - Chr6:91692-91711 None:intergenic 40.0%
! CGATAATGCCTTTTTCCGAA+TGG - Chr6:90985-91004 None:intergenic 40.0%
! GACCATCTTTTCTGAATAGG+AGG + Chr6:90872-90891 MsG0680030288.01.T01:intron 40.0%
! GCTGTACTTGGTGATAGTAT+TGG + Chr6:88460-88479 MsG0680030288.01.T01:CDS 40.0%
! GTGAAATGGGTCGGTTATTT+TGG - Chr6:87628-87647 None:intergenic 40.0%
! TAACCCTCTTAAGTTGTGCT+TGG + Chr6:92078-92097 MsG0680030288.01.T01:three_prime_UTR 40.0%
! TTAGTATGGTGCACCTTTTG+TGG - Chr6:92389-92408 None:intergenic 40.0%
!! ACTGTACTGTGTTTTTGCAG+GGG + Chr6:84195-84214 MsG0680030288.01.T01:intron 40.0%
!! CTACTGTACTGTGTTTTTGC+AGG + Chr6:84193-84212 MsG0680030288.01.T01:intron 40.0%
!! TTCGGAAAAAGGCATTATCG+TGG + Chr6:90985-91004 MsG0680030288.01.T01:intron 40.0%
!!! GTGGTTTTATGACCTTGCAA+TGG + Chr6:90555-90574 MsG0680030288.01.T01:intron 40.0%
!!! TATTTTTTCGGGTGCCCATT+TGG - Chr6:86268-86287 None:intergenic 40.0%
AAAAAATACCCACGATGGGC+GGG + Chr6:86280-86299 MsG0680030288.01.T01:intron 45.0%
AAGGTTTGACACCTTCACCT+GGG - Chr6:84060-84079 None:intergenic 45.0%
AATACCCGCATTGTTGGGTA+TGG + Chr6:86305-86324 MsG0680030288.01.T01:intron 45.0%
AATTTGAACGGGTATGGGTG+CGG + Chr6:86353-86372 MsG0680030288.01.T01:intron 45.0%
ACAAACGACTGTAAGGTCCT+AGG + Chr6:84028-84047 MsG0680030288.01.T01:intron 45.0%
ACAGACAAGATTGGAACTGC+TGG - Chr6:85506-85525 None:intergenic 45.0%
ACAGCGACATCTAACAGTAC+CGG - Chr6:84435-84454 None:intergenic 45.0%
ACCACTAAGCATGACACAGT+CGG - Chr6:85237-85256 None:intergenic 45.0%
ACCCGAAAAAATACCCACGA+TGG + Chr6:86275-86294 MsG0680030288.01.T01:intron 45.0%
ACCCTCGTGAGCAATAAGTT+TGG - Chr6:86701-86720 None:intergenic 45.0%
ACTCGTTCCTTCATGAGTTG+AGG - Chr6:88490-88509 None:intergenic 45.0%
ACTGAACTACGTGCTGTACT+TGG + Chr6:88448-88467 MsG0680030288.01.T01:CDS 45.0%
ACTTATTGCTCACGAGGGTA+TGG + Chr6:86702-86721 MsG0680030288.01.T01:CDS 45.0%
AGAAGAGTAGACCACCAAGT+AGG - Chr6:88965-88984 None:intergenic 45.0%
AGATTAACGTCGCGATCAGA+TGG - Chr6:89092-89111 None:intergenic 45.0%
AGCAGTTCCAATCTTGTCTG+TGG + Chr6:85505-85524 MsG0680030288.01.T01:CDS 45.0%
AGGGTAGCTCCAAAAGAGAA+AGG + Chr6:91154-91173 MsG0680030288.01.T01:intron 45.0%
ATACCCATAGGGTATGGAGA+CGG + Chr6:86672-86691 MsG0680030288.01.T01:CDS 45.0%
ATACCCGCATTGTTGGGTAT+GGG + Chr6:86306-86325 MsG0680030288.01.T01:intron 45.0%
ATCTCAACAGATCTCGAAGC+AGG - Chr6:83341-83360 None:intergenic 45.0%
CACCAAACTTATTGCTCACG+AGG + Chr6:86696-86715 MsG0680030288.01.T01:CDS 45.0%
CAGTTCCTCCTAGAGTGAAA+AGG - Chr6:90645-90664 None:intergenic 45.0%
CATACTCTCAGAGACCTACT+TGG + Chr6:88948-88967 MsG0680030288.01.T01:intron 45.0%
CCATACCCGTTCAAATTTGC+GGG - Chr6:86350-86369 None:intergenic 45.0%
CCCATACCCGTTCAAATTTG+CGG - Chr6:86351-86370 None:intergenic 45.0%
CCCGAAAAAATACCCACGAT+GGG + Chr6:86276-86295 MsG0680030288.01.T01:intron 45.0%
CCCTTATCTGAGTCATAGAG+AGG - Chr6:90428-90447 None:intergenic 45.0%
CCGCAAATTTGAACGGGTAT+GGG + Chr6:86348-86367 MsG0680030288.01.T01:intron 45.0%
CCTTCACAATTACCCTGCTT+GGG + Chr6:88309-88328 MsG0680030288.01.T01:CDS 45.0%
CTATATAATGTGCGGGCATG+GGG - Chr6:86405-86424 None:intergenic 45.0%
CTCATAAGCCAATTGGGTTC+GGG - Chr6:89509-89528 None:intergenic 45.0%
GAAAAAATACCCACGATGGG+CGG + Chr6:86279-86298 MsG0680030288.01.T01:intron 45.0%
GAACCGTACCTAGTACAACT+TGG - Chr6:89646-89665 None:intergenic 45.0%
GATAGGATTCTCGTACCGTA+TGG + Chr6:92114-92133 MsG0680030288.01.T01:three_prime_UTR 45.0%
GATGATGCAAGGCTTTCCAA+TGG - Chr6:85392-85411 None:intergenic 45.0%
GCAAATAATCAGCAGTACCG+AGG - Chr6:91670-91689 None:intergenic 45.0%
GCAACCAAGCACAACTTAAG+AGG - Chr6:92085-92104 None:intergenic 45.0%
GCAGATCCTTCTGCCAATAT+AGG - Chr6:85620-85639 None:intergenic 45.0%
GCCAGGAAAATCTTCTCAAC+TGG - Chr6:85074-85093 None:intergenic 45.0%
GGAACTACCACAGACAAGAT+TGG - Chr6:85515-85534 None:intergenic 45.0%
GGGATGACAAACCATGAGTA+TGG + Chr6:91917-91936 MsG0680030288.01.T01:CDS 45.0%
GGGTAAATACCCGCATTGTT+GGG + Chr6:86300-86319 MsG0680030288.01.T01:intron 45.0%
GGTATGAAGGATAGACCAGA+TGG + Chr6:91233-91252 MsG0680030288.01.T01:intron 45.0%
GGTCCAATCAAATGAGTCTG+TGG - Chr6:85546-85565 None:intergenic 45.0%
GGTTCCATCAAGAACTGCAT+TGG - Chr6:85216-85235 None:intergenic 45.0%
GTAGCAAATGAAAGTGAGGG+GGG - Chr6:89316-89335 None:intergenic 45.0%
GTAGCCAATGCAGTTCTTGA+TGG + Chr6:85209-85228 MsG0680030288.01.T01:CDS 45.0%
GTCTATATAATGTGCGGGCA+TGG - Chr6:86407-86426 None:intergenic 45.0%
GTCTCTTGGATATGTTTCGC+AGG + Chr6:91012-91031 MsG0680030288.01.T01:intron 45.0%
GTGAGTTCCAGGATAATTGG+GGG + Chr6:90488-90507 MsG0680030288.01.T01:intron 45.0%
GTGTTCCTTTCTTTCCTTCC+AGG + Chr6:88577-88596 MsG0680030288.01.T01:intron 45.0%
GTTAATGTCCGCAAGGTTCT+CGG + Chr6:84620-84639 MsG0680030288.01.T01:CDS 45.0%
TAAGGTTTGACACCTTCACC+TGG - Chr6:84061-84080 None:intergenic 45.0%
TAATCTTCGACCTCTAGCAG+TGG - Chr6:88248-88267 None:intergenic 45.0%
TAATCTTGTTGGCAAGCCTG+TGG + Chr6:85118-85137 MsG0680030288.01.T01:CDS 45.0%
TACGGTACGAGAATCCTATC+GGG - Chr6:92114-92133 None:intergenic 45.0%
TAGACAAGACATCCTCACCT+GGG + Chr6:83822-83841 MsG0680030288.01.T01:intron 45.0%
TAGCTAACTACTGAAGCGGT+GGG + Chr6:83188-83207 MsG0680030288.01.T01:five_prime_UTR 45.0%
TATGACCTTGCAATGGACAG+AGG + Chr6:90562-90581 MsG0680030288.01.T01:intron 45.0%
TCCATTGCCTATGAGTCCAT+TGG + Chr6:85373-85392 MsG0680030288.01.T01:CDS 45.0%
TCTAGGAGGAACTGACAACA+TGG + Chr6:90651-90670 MsG0680030288.01.T01:intron 45.0%
TCTTCCCACTCTTACTGACA+AGG + Chr6:84514-84533 MsG0680030288.01.T01:CDS 45.0%
TGGAGGATTTAGCTGTTAGC+AGG + Chr6:85895-85914 MsG0680030288.01.T01:intron 45.0%
TGGGTTGTCCAAGTTGTACT+AGG + Chr6:89635-89654 MsG0680030288.01.T01:intron 45.0%
TGGTATTTCCAGGCTTCAAG+TGG - Chr6:84358-84377 None:intergenic 45.0%
TGTAAGCATGTGCTGTCAGA+TGG - Chr6:90077-90096 None:intergenic 45.0%
TTAATGTCCGCAAGGTTCTC+GGG + Chr6:84621-84640 MsG0680030288.01.T01:CDS 45.0%
TTAGACAAGACATCCTCACC+TGG + Chr6:83821-83840 MsG0680030288.01.T01:intron 45.0%
TTAGGAACACGACCATCGTT+AGG - Chr6:83293-83312 None:intergenic 45.0%
TTCAACCTCTGTCCATTGCA+AGG - Chr6:90570-90589 None:intergenic 45.0%
TTCATCCCTTCCACTCGATT+TGG + Chr6:91979-91998 MsG0680030288.01.T01:three_prime_UTR 45.0%
TTCCACCTGGAAGGAAAGAA+AGG - Chr6:88585-88604 None:intergenic 45.0%
TTCCATTCCAAGATCACCAC+GGG - Chr6:85048-85067 None:intergenic 45.0%
TTCCTTTCTTTCCTTCCAGG+TGG + Chr6:88580-88599 MsG0680030288.01.T01:intron 45.0%
TTGTCCTGTGATCAAGAAGC+CGG + Chr6:84413-84432 MsG0680030288.01.T01:CDS 45.0%
! AGGCTTTCCAATGGACTCAT+AGG - Chr6:85383-85402 None:intergenic 45.0%
! CAAAAGGGGCTTTGTAAACC+TGG + Chr6:85701-85720 MsG0680030288.01.T01:CDS 45.0%
! CCCAGTTGAGAAGATTTTCC+TGG + Chr6:85070-85089 MsG0680030288.01.T01:CDS 45.0%
! CTCGTTCCTTCATGAGTTGA+GGG - Chr6:88489-88508 None:intergenic 45.0%
! CTCTCTAAAGGTGACTTTGG+AGG - Chr6:88666-88685 None:intergenic 45.0%
! CTTATTGCTCACGAGGGTAT+GGG + Chr6:86703-86722 MsG0680030288.01.T01:CDS 45.0%
! GGCAACAACAGATCCAGTTT+TGG - Chr6:88645-88664 None:intergenic 45.0%
! GTAGCTTTTGTGATGCAACG+AGG + Chr6:86156-86175 MsG0680030288.01.T01:intron 45.0%
! GTGATGCAACGAGGCTTTTT+GGG + Chr6:86165-86184 MsG0680030288.01.T01:intron 45.0%
! GTTGTGAAAGTGCGGGTAAT+GGG + Chr6:86630-86649 MsG0680030288.01.T01:intron 45.0%
! TCCAATGGACTCATAGGCAA+TGG - Chr6:85377-85396 None:intergenic 45.0%
! TGTGATGCAACGAGGCTTTT+TGG + Chr6:86164-86183 MsG0680030288.01.T01:intron 45.0%
! TGTTGTGAAAGTGCGGGTAA+TGG + Chr6:86629-86648 MsG0680030288.01.T01:intron 45.0%
!! GCTCTGAATGAACTCGGTTT+TGG + Chr6:85932-85951 MsG0680030288.01.T01:intron 45.0%
!! TATTAGCTGGCCTTAGATGC+AGG + Chr6:85803-85822 MsG0680030288.01.T01:intron 45.0%
!!! CCCATCGTGGGTATTTTTTC+GGG - Chr6:86279-86298 None:intergenic 45.0%
!!! GCCCATCGTGGGTATTTTTT+CGG - Chr6:86280-86299 None:intergenic 45.0%
!! TATTTAATTCAAATTTATAA+TGG + Chr6:89440-89459 MsG0680030288.01.T01:intron 5.0%
!!! ATTATTTCTTAATAAAATTA+TGG - Chr6:87867-87886 None:intergenic 5.0%
!!! TTATTTCTTAATAAAATTAT+GGG - Chr6:87866-87885 None:intergenic 5.0%
AAACACGCCCCCAATTATCC+TGG - Chr6:90498-90517 None:intergenic 50.0%
ACCATGGTACCCTGCTCAAT+GGG + Chr6:86769-86788 MsG0680030288.01.T01:intron 50.0%
ACCGACTGTGTCATGCTTAG+TGG + Chr6:85233-85252 MsG0680030288.01.T01:CDS 50.0%
ACGCACAACTGCGAGATTGT+GGG - Chr6:83854-83873 None:intergenic 50.0%
ACGGGCACTTAGATACCCAT+AGG + Chr6:86660-86679 MsG0680030288.01.T01:CDS 50.0%
ACTCTCAGAGACCTACTTGG+TGG + Chr6:88951-88970 MsG0680030288.01.T01:intron 50.0%
ACTCTGCAATGTTGGGTGAG+AGG + Chr6:84459-84478 MsG0680030288.01.T01:CDS 50.0%
AGAAAGCCAGTCCGAATCTC+AGG - Chr6:84221-84240 None:intergenic 50.0%
ATTTGAACGGGTATGGGTGC+GGG + Chr6:86354-86373 MsG0680030288.01.T01:intron 50.0%
CAATGGGTACCCATTGAGCA+GGG - Chr6:86781-86800 None:intergenic 50.0%
CACAACCCTTCCTGCATCTA+AGG - Chr6:85816-85835 None:intergenic 50.0%
CACGACAATGAGTTTCGCTC+TGG - Chr6:85438-85457 None:intergenic 50.0%
CATCTCTGCAACACTGAGCT+TGG - Chr6:91052-91071 None:intergenic 50.0%
CCCAAGCAGGGTAATTGTGA+AGG - Chr6:88312-88331 None:intergenic 50.0%
CCCGCAAATTTGAACGGGTA+TGG + Chr6:86347-86366 MsG0680030288.01.T01:intron 50.0%
CGGGCACTTAGATACCCATA+GGG + Chr6:86661-86680 MsG0680030288.01.T01:CDS 50.0%
CGGGTAAATACCCGCATTGT+TGG + Chr6:86299-86318 MsG0680030288.01.T01:intron 50.0%
CTACATCAGTTGCTTCGGCT+CGG - Chr6:85193-85212 None:intergenic 50.0%
CTAGCTAACTACTGAAGCGG+TGG + Chr6:83187-83206 MsG0680030288.01.T01:five_prime_UTR 50.0%
GAAGATCCACCACAACACCA+GGG - Chr6:84499-84518 None:intergenic 50.0%
GACTTTCGTCGCTCCAAAAC+TGG + Chr6:88629-88648 MsG0680030288.01.T01:CDS 50.0%
GAGATTGTGGGTACAAACCC+AGG - Chr6:83842-83861 None:intergenic 50.0%
GCAGTTGATCTCAAGGCTTC+TGG - Chr6:92142-92161 None:intergenic 50.0%
GCCTTCACAATTACCCTGCT+TGG + Chr6:88308-88327 MsG0680030288.01.T01:CDS 50.0%
GGATTGAAGCTGCGAGCAAA+AGG - Chr6:89032-89051 None:intergenic 50.0%
TAACTACTGAAGCGGTGGGT+GGG + Chr6:83192-83211 MsG0680030288.01.T01:five_prime_UTR 50.0%
TACATCAGTTGCTTCGGCTC+GGG - Chr6:85192-85211 None:intergenic 50.0%
TACCCATAGGGTATGGAGAC+GGG + Chr6:86673-86692 MsG0680030288.01.T01:CDS 50.0%
TCCATGGGTGATTGGGAAGA+GGG + Chr6:91896-91915 MsG0680030288.01.T01:CDS 50.0%
TGAGACTGATGCGTTCATGG+TGG + Chr6:85022-85041 MsG0680030288.01.T01:CDS 50.0%
TGATTGGACCTGCAGTGATG+AGG + Chr6:85556-85575 MsG0680030288.01.T01:CDS 50.0%
TGCGTACAGCAGATGATGCA+AGG - Chr6:85403-85422 None:intergenic 50.0%
TGCTGTACGCACAGCCAATA+AGG + Chr6:85412-85431 MsG0680030288.01.T01:CDS 50.0%
TGGCAACCCTCAACTCATGA+AGG + Chr6:88480-88499 MsG0680030288.01.T01:CDS 50.0%
TGGTATGTCATGGGTCGACT+TGG + Chr6:89219-89238 MsG0680030288.01.T01:CDS 50.0%
TTAAAACGCGAGTGTGGGGA+GGG + Chr6:86745-86764 MsG0680030288.01.T01:intron 50.0%
TTAAAAGGGAGCAGCCACAC+AGG - Chr6:90344-90363 None:intergenic 50.0%
TTTCCAGGCTTCAAGTGGAC+AGG - Chr6:84353-84372 None:intergenic 50.0%
! AAGGTCCTAGGTTCTAACCC+AGG + Chr6:84040-84059 MsG0680030288.01.T01:intron 50.0%
! AGGATAATTGGGGGCGTGTT+TGG + Chr6:90497-90516 MsG0680030288.01.T01:intron 50.0%
! CTAGGTTCTAACCCAGGTGA+AGG + Chr6:84046-84065 MsG0680030288.01.T01:intron 50.0%
! CTTCACCTGGGTTAGAACCT+AGG - Chr6:84048-84067 None:intergenic 50.0%
! GGTATGTCATGGGTCGACTT+GGG + Chr6:89220-89239 MsG0680030288.01.T01:CDS 50.0%
! TGTCAATCTCCCTGGTGTTG+TGG + Chr6:84487-84506 MsG0680030288.01.T01:CDS 50.0%
! TTCGGGTGCCCATTTGGTTT+GGG - Chr6:86262-86281 None:intergenic 50.0%
! TTTCGGGTGCCCATTTGGTT+TGG - Chr6:86263-86282 None:intergenic 50.0%
! TTTTGCAGGGGCCTGAGATT+CGG + Chr6:84207-84226 MsG0680030288.01.T01:intron 50.0%
!! AACCTTGGTGTCGAGCATGA+CGG - Chr6:83492-83511 None:intergenic 50.0%
!! AGTACCGGCTTCTTGATCAC+AGG - Chr6:84420-84439 None:intergenic 50.0%
!! CGGACTGGCTTTCTGAAAGA+TGG + Chr6:84227-84246 MsG0680030288.01.T01:CDS 50.0%
!! CTTAGTGGTGAAAGTGCTGC+TGG + Chr6:85248-85267 MsG0680030288.01.T01:CDS 50.0%
!! GAGTTTCGCTCTGGCCTTAT+TGG - Chr6:85429-85448 None:intergenic 50.0%
!! GTATGTCATGGGTCGACTTG+GGG + Chr6:89221-89240 MsG0680030288.01.T01:CDS 50.0%
!! TCAAGGCTTCTGGCTCCATA+CGG - Chr6:92132-92151 None:intergenic 50.0%
!!! TGTTTTGGTGGTCGGTCCAT+GGG + Chr6:91881-91900 MsG0680030288.01.T01:CDS 50.0%
!!! TTGTTTTGGTGGTCGGTCCA+TGG + Chr6:91880-91899 MsG0680030288.01.T01:CDS 50.0%
AGAGCAACAACGGCTTCACC+AGG - Chr6:85722-85741 None:intergenic 55.0%
AGGCCCATACCCAACAATGC+GGG - Chr6:86312-86331 None:intergenic 55.0%
AGGGTATGGGCTCAGGTATG+GGG + Chr6:86716-86735 MsG0680030288.01.T01:intron 55.0%
ATCTGGGTAGCAGTCACCAC+AGG - Chr6:85137-85156 None:intergenic 55.0%
CACCATGGTACCCTGCTCAA+TGG + Chr6:86768-86787 MsG0680030288.01.T01:intron 55.0%
CACGCACAACTGCGAGATTG+TGG - Chr6:83855-83874 None:intergenic 55.0%
CAGGCCCATACCCAACAATG+CGG - Chr6:86313-86332 None:intergenic 55.0%
CCATGGGTGATTGGGAAGAG+GGG + Chr6:91897-91916 MsG0680030288.01.T01:CDS 55.0%
CGAGAATCCTATCGGGCAAG+TGG - Chr6:92107-92126 None:intergenic 55.0%
CTAACTACTGAAGCGGTGGG+TGG + Chr6:83191-83210 MsG0680030288.01.T01:five_prime_UTR 55.0%
CTTAAAACGCGAGTGTGGGG+AGG + Chr6:86744-86763 MsG0680030288.01.T01:intron 55.0%
GAGATGAGTAGCATGGCGTG+TGG + Chr6:88049-88068 MsG0680030288.01.T01:intron 55.0%
GCAAATGAAAGTGAGGGGGG+AGG - Chr6:89313-89332 None:intergenic 55.0%
GCAATGGGTACCCATTGAGC+AGG - Chr6:86782-86801 None:intergenic 55.0%
GCATTGTTGGGTATGGGCCT+GGG + Chr6:86312-86331 MsG0680030288.01.T01:intron 55.0%
GCGTGAGACTGATGCGTTCA+TGG + Chr6:85019-85038 MsG0680030288.01.T01:CDS 55.0%
GGAAGATCCACCACAACACC+AGG - Chr6:84500-84519 None:intergenic 55.0%
GGATCAGGAACCACTGCTAG+AGG + Chr6:88235-88254 MsG0680030288.01.T01:CDS 55.0%
GGGGACAGCAGTAGTTGTAG+AGG - Chr6:88081-88100 None:intergenic 55.0%
GGTATTTACCCGCCCATCGT+GGG - Chr6:86291-86310 None:intergenic 55.0%
GTAGCATGGCGTGTGGATGT+TGG + Chr6:88056-88075 MsG0680030288.01.T01:intron 55.0%
GTCCATGGGTGATTGGGAAG+AGG + Chr6:91895-91914 MsG0680030288.01.T01:CDS 55.0%
TATAATGTGCGGGCATGGGG+CGG - Chr6:86402-86421 None:intergenic 55.0%
TCGTACTTGCAGGTGGACCT+CGG + Chr6:91650-91669 MsG0680030288.01.T01:intron 55.0%
TGAACGCATCAGTCTCACGC+AGG - Chr6:85019-85038 None:intergenic 55.0%
TGCCCGTCTCCATACCCTAT+GGG - Chr6:86678-86697 None:intergenic 55.0%
TGGCCGAGGAGACTTGATCA+TGG - Chr6:85168-85187 None:intergenic 55.0%
TGGTCGGTCCATGGGTGATT+GGG + Chr6:91889-91908 MsG0680030288.01.T01:CDS 55.0%
TGTGGGTACAAACCCAGGTG+AGG - Chr6:83837-83856 None:intergenic 55.0%
TTGAGACGCCCGAACCCAAT+TGG + Chr6:89498-89517 MsG0680030288.01.T01:intron 55.0%
! ACCCATTGAGCAGGGTACCA+TGG - Chr6:86773-86792 None:intergenic 55.0%
! ATTGTCGTGCTGACACGAGG+TGG + Chr6:85449-85468 MsG0680030288.01.T01:CDS 55.0%
! CTCATTGTCGTGCTGACACG+AGG + Chr6:85446-85465 MsG0680030288.01.T01:CDS 55.0%
! GAGGGTATGGGCTCAGGTAT+GGG + Chr6:86715-86734 MsG0680030288.01.T01:intron 55.0%
! TTGGTTGCCACTTGCCCGAT+AGG + Chr6:92097-92116 MsG0680030288.01.T01:three_prime_UTR 55.0%
! TTGTCGTGCTGACACGAGGT+GGG + Chr6:85450-85469 MsG0680030288.01.T01:CDS 55.0%
!! AGCTGGCCTTAGATGCAGGA+AGG + Chr6:85807-85826 MsG0680030288.01.T01:intron 55.0%
!! CAATCTCCCTGGTGTTGTGG+TGG + Chr6:84490-84509 MsG0680030288.01.T01:CDS 55.0%
!! GCTGGCCTTAGATGCAGGAA+GGG + Chr6:85808-85827 MsG0680030288.01.T01:intron 55.0%
!! TCAGCACCGACTGTGACTGT+GGG - Chr6:88102-88121 None:intergenic 55.0%
!! TTCAGCACCGACTGTGACTG+TGG - Chr6:88103-88122 None:intergenic 55.0%
AAGGGAGCAGCCACACAGGT+TGG - Chr6:90340-90359 None:intergenic 60.0%
ATAATGTGCGGGCATGGGGC+GGG - Chr6:86401-86420 None:intergenic 60.0%
ATGGTGGCCCGTGGTGATCT+TGG + Chr6:85038-85057 MsG0680030288.01.T01:CDS 60.0%
CATGTGGCCCGAGAACCTTG+CGG - Chr6:84631-84650 None:intergenic 60.0%
CCCCTCTTCCCAATCACCCA+TGG - Chr6:91900-91919 None:intergenic 60.0%
CGCATTGTTGGGTATGGGCC+TGG + Chr6:86311-86330 MsG0680030288.01.T01:intron 60.0%
CTGCCTGTCCACTTGAAGCC+TGG + Chr6:84347-84366 MsG0680030288.01.T01:CDS 60.0%
CTGTCCCCCACAGTCACAGT+CGG + Chr6:88093-88112 MsG0680030288.01.T01:intron 60.0%
GGCCCGTGGTGATCTTGGAA+TGG + Chr6:85043-85062 MsG0680030288.01.T01:CDS 60.0%
GGGTATTTACCCGCCCATCG+TGG - Chr6:86292-86311 None:intergenic 60.0%
GTGCCCGTCTCCATACCCTA+TGG - Chr6:86679-86698 None:intergenic 60.0%
GTGGTCGGTCCATGGGTGAT+TGG + Chr6:91888-91907 MsG0680030288.01.T01:CDS 60.0%
TGCCGTCATGCTCGACACCA+AGG + Chr6:83487-83506 MsG0680030288.01.T01:CDS 60.0%
TGCTGGTGCCTCATCACTGC+AGG - Chr6:85567-85586 None:intergenic 60.0%
! CGAGGGTATGGGCTCAGGTA+TGG + Chr6:86714-86733 MsG0680030288.01.T01:intron 60.0%
! GCAGTGATGAGGCACCAGCA+AGG + Chr6:85567-85586 MsG0680030288.01.T01:CDS 60.0%
!! AGCACCGACTGTGACTGTGG+GGG - Chr6:88100-88119 None:intergenic 60.0%
!! CAGCACCGACTGTGACTGTG+GGG - Chr6:88101-88120 None:intergenic 60.0%
!! CGGGTAATGGGTGCGAGTAC+GGG + Chr6:86642-86661 MsG0680030288.01.T01:CDS 60.0%
!! GCGGGTAATGGGTGCGAGTA+CGG + Chr6:86641-86660 MsG0680030288.01.T01:CDS 60.0%
!! TCAGTTGCTTCGGCTCGGGT+TGG - Chr6:85188-85207 None:intergenic 60.0%
ACGGGTATGGGTGCGGGTAC+AGG + Chr6:86360-86379 MsG0680030288.01.T01:intron 65.0%
CAGGGGCCTGAGATTCGGAC+TGG + Chr6:84212-84231 MsG0680030288.01.T01:intron 65.0%
GATGCGTTCATGGTGGCCCG+TGG + Chr6:85029-85048 MsG0680030288.01.T01:CDS 65.0%
GTTGGGTATGGGCCTGGGCA+CGG + Chr6:86317-86336 MsG0680030288.01.T01:intron 65.0%
TAATGTGCGGGCATGGGGCG+GGG - Chr6:86400-86419 None:intergenic 65.0%
TTGGGTATGGGCCTGGGCAC+GGG + Chr6:86318-86337 MsG0680030288.01.T01:intron 65.0%
! GCTCACGAGGGTATGGGCTC+AGG + Chr6:86709-86728 MsG0680030288.01.T01:CDS 65.0%
GCGGGCAATTACCCGTGCCC+AGG - Chr6:86332-86351 None:intergenic 70.0%
!! CGAGTGTGGGGAGGGCACCA+TGG + Chr6:86753-86772 MsG0680030288.01.T01:intron 70.0%
!! GCTTCGGCTCGGGTTGGCCG+AGG - Chr6:85182-85201 None:intergenic 75.0%
! GTGCGGGCATGGGGCGGGGT+GGG - Chr6:86396-86415 None:intergenic 80.0%
! TGTGCGGGCATGGGGCGGGG+TGG - Chr6:86397-86416 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 83082 92439 83082 ID=MsG0680030288.01;Name=MsG0680030288.01
Chr6 mRNA 83082 92439 83082 ID=MsG0680030288.01.T01;Parent=MsG0680030288.01;Name=MsG0680030288.01.T01;_AED=0.33;_eAED=0.33;_QI=169|0.7|0.63|0.90|1|1|11|478|784
Chr6 exon 83082 83508 83082 ID=MsG0680030288.01.T01:exon:1879;Parent=MsG0680030288.01.T01
Chr6 exon 84215 84676 84215 ID=MsG0680030288.01.T01:exon:1880;Parent=MsG0680030288.01.T01
Chr6 exon 84978 85786 84978 ID=MsG0680030288.01.T01:exon:1881;Parent=MsG0680030288.01.T01
Chr6 exon 86640 86730 86640 ID=MsG0680030288.01.T01:exon:1882;Parent=MsG0680030288.01.T01
Chr6 exon 88106 88335 88106 ID=MsG0680030288.01.T01:exon:1883;Parent=MsG0680030288.01.T01
Chr6 exon 88420 88507 88420 ID=MsG0680030288.01.T01:exon:1884;Parent=MsG0680030288.01.T01
Chr6 exon 88599 88684 88599 ID=MsG0680030288.01.T01:exon:1885;Parent=MsG0680030288.01.T01
Chr6 exon 89043 89121 89043 ID=MsG0680030288.01.T01:exon:1886;Parent=MsG0680030288.01.T01
Chr6 exon 89207 89266 89207 ID=MsG0680030288.01.T01:exon:1887;Parent=MsG0680030288.01.T01
Chr6 exon 90398 90487 90398 ID=MsG0680030288.01.T01:exon:1888;Parent=MsG0680030288.01.T01
Chr6 exon 91860 92439 91860 ID=MsG0680030288.01.T01:exon:1889;Parent=MsG0680030288.01.T01
Chr6 five_prime_UTR 83082 83250 83082 ID=MsG0680030288.01.T01:five_prime_utr;Parent=MsG0680030288.01.T01
Chr6 CDS 83251 83508 83251 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 84215 84676 84215 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 84978 85786 84978 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 86640 86730 86640 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 88106 88335 88106 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 88420 88507 88420 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 88599 88684 88599 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 89043 89121 89043 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 89207 89266 89207 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 90398 90487 90398 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 CDS 91860 91961 91860 ID=MsG0680030288.01.T01:cds;Parent=MsG0680030288.01.T01
Chr6 three_prime_UTR 91962 92439 91962 ID=MsG0680030288.01.T01:three_prime_utr;Parent=MsG0680030288.01.T01
Gene Sequence

>MsG0680030288.01.T01

ATGTCGAACATAGACATTGAAGGGATCTTGAATCAACTACCTAACGATGGTCGTGTTCCTAAGACCAAAATTGTTTGTACTTTGGGTCCTGCTTCGAGATCTGTTGAGATGATTCAAAAACTTCTTAAAGCTGGCATGAATGTTGCTCGTTTCAATTTTTCACATGGTACTCATGAATATCATCAGGAAACCCTCGATAATCTCAAGTCTGCTATGCATTCTACTGGTATTCTCTGTGCCGTCATGCTCGACACCAAGGGGCCTGAGATTCGGACTGGCTTTCTGAAAGATGGAAAACCTATTCAACTCAAAGAAGGACAAGAAATCACCATAACTACTGATTATGAAATCAAGGGAGATCCAGAGATGATATCAATGAGTTACAAGAAACTGCCTGTCCACTTGAAGCCTGGAAATACCATTCTATGCTCTGATGGAACAATCAGTCTCACTGTTTTGTCCTGTGATCAAGAAGCCGGTACTGTTAGATGTCGCTGTCAAAACTCTGCAATGTTGGGTGAGAGGAAAAATGTCAATCTCCCTGGTGTTGTGGTGGATCTTCCCACTCTTACTGACAAGGATAAGGAAGATATTCTTGAATGGGGTGTCCCTAACAATATTGATATGATTGCTCTTTCATTTGTTCGTAAGGGCTCTGATCTTGTTAATGTCCGCAAGGTTCTCGGGCCACATGCTAAGCATATTCAGTTGATGTCAAAGGTTGAGAATCAGGAGGGAGTCATGAACTTTGATGAGATCCTGCGTGAGACTGATGCGTTCATGGTGGCCCGTGGTGATCTTGGAATGGAAATCCCAGTTGAGAAGATTTTCCTGGCACAGAAAATGATGATTTATAAGTGTAATCTTGTTGGCAAGCCTGTGGTGACTGCTACCCAGATGCTTGAATCCATGATCAAGTCTCCTCGGCCAACCCGAGCCGAAGCAACTGATGTAGCCAATGCAGTTCTTGATGGAACCGACTGTGTCATGCTTAGTGGTGAAAGTGCTGCTGGAGCATACCCTGAACTTGCTGTCAAAATCATGGCTCGCATTTGTGTTGAAGCAGAATCATCCCTTGATTATGGTGCTATATTCAAAGAGATGATAAGGTCTACTCCATTGCCTATGAGTCCATTGGAAAGCCTTGCATCATCTGCTGTACGCACAGCCAATAAGGCCAGAGCGAAACTCATTGTCGTGCTGACACGAGGTGGGAGTACTGCCAAGTTAGTTGCTAAGTATAGGCCAGCAGTTCCAATCTTGTCTGTGGTAGTTCCGGTTTTGACCACAGACTCATTTGATTGGACCTGCAGTGATGAGGCACCAGCAAGGCACAGCTTAATATACAGAGGCTTGATTCCTATATTGGCAGAAGGATCTGCAAGAGCTACTGATGCAGAATCTACAGATGCAATTCTGGAAGCTTCTCTTAAGTCAGCAACACAAAAGGGGCTTTGTAAACCTGGTGAAGCCGTTGTTGCTCTTCATCGTATTGGAGCTGCTTCTGTTATAAAGATCTGCATAGTGAATGCGGGTAATGGGTGCGAGTACGGGCACTTAGATACCCATAGGGTATGGAGACGGGCACCAAACTTATTGCTCACGAGGGTATGGGCTCAGTCACAGTCGGTGCTGAAGCGTAGTCCTTCTACTACTCGTTCTGTGTTTGTTTGTTGTGTCTCTAAATCCAAATCCAAATCCAAATCCAACTTGAAGGATAATGACGATGAAATTGATAAATCGATAAAAGGATCAGGAACCACTGCTAGAGGTCGAAGATTACTAAGAATTCGACAAGATAAACAACAACGCGAACACGAACGCCTTCACAATTACCCTGCTTGGGCTAAAGTCCTTGAAGATGCTTGTAAAAACGACACTGAACTACGTGCTGTACTTGGTGATAGTATTGGCAACCCTCAACTCATGAAGGAACGAGTGGAAGATAGAATTCGAAAAAAGGGTAAAGACTTTCGTCGCTCCAAAACTGGATCTGTTGTTGCCTCCAAAGTCACCTTTAGAGACTTCAATCCACTTGATTCATATATCTGGTTTGAATTGTATGGATCACCATCTGATCGCGACGTTAATCTAATTGGCAGTGTTATTCAAGCATGGTATGTCATGGGTCGACTTGGGGCCTACAATTCTTCAAACTTGCAGATGTCAAATTCGTCAATGGAGTATGATCCTCTCTATGACTCAGATAAGGGTTTCAAAGTGATGCCGTCATCTTTCCATGATATCAGTGATATATCTTGGTATCCAACAAATTGTTTTGGTGGTCGGTCCATGGGTGATTGGGAAGAGGGGATGACAAACCATGAGTATGGTTACAAGTACTTCAAGATATGA
Protein sequence

>MsG0680030288.01.T01

MSNIDIEGILNQLPNDGRVPKTKIVCTLGPASRSVEMIQKLLKAGMNVARFNFSHGTHEYHQETLDNLKSAMHSTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITITTDYEIKGDPEMISMSYKKLPVHLKPGNTILCSDGTISLTVLSCDQEAGTVRCRCQNSAMLGERKNVNLPGVVVDLPTLTDKDKEDILEWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKHIQLMSKVENQEGVMNFDEILRETDAFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPELAVKIMARICVEAESSLDYGAIFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDEAPARHSLIYRGLIPILAEGSARATDAESTDAILEASLKSATQKGLCKPGEAVVALHRIGAASVIKICIVNAGNGCEYGHLDTHRVWRRAPNLLLTRVWAQSQSVLKRSPSTTRSVFVCCVSKSKSKSKSNLKDNDDEIDKSIKGSGTTARGRRLLRIRQDKQQREHERLHNYPAWAKVLEDACKNDTELRAVLGDSIGNPQLMKERVEDRIRKKGKDFRRSKTGSVVASKVTFRDFNPLDSYIWFELYGSPSDRDVNLIGSVIQAWYVMGRLGAYNSSNLQMSNSSMEYDPLYDSDKGFKVMPSSFHDISDISWYPTNCFGGRSMGDWEEGMTNHEYGYKYFKI*