Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005633.01.T01 | XP_003592422.1 | 96.757 | 185 | 6 | 0 | 1 | 185 | 1 | 185 | 5.85E-114 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005633.01.T01 | P80728 | 54.455 | 101 | 46 | 0 | 22 | 122 | 1 | 101 | 1.70E-38 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005633.01.T01 | G7ID83 | 96.757 | 185 | 6 | 0 | 1 | 185 | 1 | 185 | 2.80e-114 | 332 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048889.01 | MsG0180005633.01 | 0.807703 | 4.439547e-50 | 2.489833e-47 |
| MsG0180001143.01 | MsG0180005633.01 | 0.828368 | 9.345223e-55 | 9.269784e-52 |
| MsG0180002808.01 | MsG0180005633.01 | 0.801410 | 9.125699e-49 | 4.354905e-46 |
| MsG0180003620.01 | MsG0180005633.01 | 0.821671 | 3.566381e-53 | 2.920564e-50 |
| MsG0180004102.01 | MsG0180005633.01 | 0.814513 | 1.482861e-51 | 9.970545e-49 |
| MsG0180005369.01 | MsG0180005633.01 | -0.803525 | 3.344826e-49 | 1.684681e-46 |
| MsG0180005633.01 | MsG0180005819.01 | 0.801900 | 7.239749e-49 | 3.498176e-46 |
| MsG0180005633.01 | MsG0280006909.01 | 0.803154 | 3.992144e-49 | 1.991582e-46 |
| MsG0180005633.01 | MsG0280006924.01 | 0.814760 | 1.307235e-51 | 8.847683e-49 |
| MsG0180005633.01 | MsG0280008697.01 | 0.806718 | 7.177938e-50 | 3.924027e-47 |
| MsG0180005633.01 | MsG0280008740.01 | 0.808303 | 3.308797e-50 | 1.885221e-47 |
| MsG0180005633.01 | MsG0280010617.01 | 0.829404 | 5.245945e-55 | 5.364188e-52 |
| MsG0180005633.01 | MsG0280010825.01 | 0.802742 | 4.856575e-49 | 2.397547e-46 |
| MsG0180005633.01 | MsG0380016096.01 | -0.828429 | 9.035687e-55 | 8.979190e-52 |
| MsG0180005633.01 | MsG0380016819.01 | 0.801599 | 8.345383e-49 | 4.001425e-46 |
| MsG0180005633.01 | MsG0380016845.01 | 0.801120 | 1.045971e-48 | 4.955397e-46 |
| MsG0180005633.01 | MsG0480020366.01 | 0.827208 | 1.775673e-54 | 1.702863e-51 |
| MsG0180005633.01 | MsG0480021175.01 | 0.834752 | 2.498774e-56 | 2.992986e-53 |
| MsG0180005633.01 | MsG0480023067.01 | 0.800979 | 1.117826e-48 | 5.277193e-46 |
| MsG0180005633.01 | MsG0480023575.01 | 0.814287 | 1.664005e-51 | 1.111964e-48 |
| MsG0180005633.01 | MsG0480023626.01 | 0.827305 | 1.683927e-54 | 1.619451e-51 |
| MsG0180005633.01 | MsG0580028916.01 | 0.803362 | 3.614939e-49 | 1.812928e-46 |
| MsG0180005633.01 | MsG0680030288.01 | 0.806557 | 7.763178e-50 | 4.226534e-47 |
| MsG0180005633.01 | MsG0680031062.01 | 0.806709 | 7.210246e-50 | 3.940710e-47 |
| MsG0180005633.01 | MsG0680031356.01 | 0.808942 | 2.416485e-50 | 1.400061e-47 |
| MsG0180005633.01 | MsG0680034139.01 | 0.810909 | 9.116296e-51 | 5.565032e-48 |
| MsG0180005633.01 | MsG0780036890.01 | 0.817659 | 2.939840e-52 | 2.153969e-49 |
| MsG0180005633.01 | MsG0780037371.01 | 0.823655 | 1.232429e-53 | 1.067800e-50 |
| MsG0180005633.01 | MsG0780037751.01 | 0.801134 | 1.039204e-48 | 4.925154e-46 |
| MsG0180005633.01 | MsG0780038305.01 | 0.813838 | 2.089926e-51 | 1.379667e-48 |
| MsG0180005633.01 | MsG0780038952.01 | 0.823150 | 1.616712e-53 | 1.380841e-50 |
| MsG0180005633.01 | MsG0780039536.01 | 0.816016 | 6.872426e-52 | 4.813926e-49 |
| MsG0180005633.01 | MsG0780040266.01 | 0.800264 | 1.563447e-48 | 7.247975e-46 |
| MsG0180005633.01 | MsG0780040460.01 | 0.814170 | 1.765408e-51 | 1.175990e-48 |
| MsG0180005633.01 | MsG0780041100.01 | 0.811742 | 6.012949e-51 | 3.752025e-48 |
| MsG0180005633.01 | MsG0780041531.01 | -0.823294 | 1.496491e-53 | 1.283281e-50 |
| MsG0180005633.01 | MsG0880043261.01 | 0.803937 | 2.746452e-49 | 1.398075e-46 |
| MsG0180005633.01 | MsG0880044989.01 | 0.831883 | 1.296374e-55 | 1.425704e-52 |
| MsG0180005633.01 | MsG0880045482.01 | 0.808600 | 2.859913e-50 | 1.642123e-47 |
| MsG0180005633.01 | MsG0880046174.01 | -0.805049 | 1.610476e-49 | 8.435540e-47 |
| MsG0180005633.01 | MsG0880047228.01 | 0.823309 | 1.484311e-53 | 1.273345e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005633.01.T01 | MTR_1g104800 | 96.757 | 185 | 6 | 0 | 1 | 185 | 1 | 185 | 7.09e-118 | 332 |
| MsG0180005633.01.T01 | MTR_5g006040 | 71.515 | 165 | 40 | 3 | 1 | 164 | 1 | 159 | 8.78e-86 | 250 |
| MsG0180005633.01.T01 | MTR_4g114870 | 39.264 | 163 | 89 | 3 | 1 | 157 | 1 | 159 | 3.64e-27 | 105 |
| MsG0180005633.01.T01 | MTR_4g114870 | 46.000 | 100 | 52 | 1 | 25 | 122 | 191 | 290 | 1.60e-26 | 103 |
| MsG0180005633.01.T01 | MTR_8g007020 | 33.125 | 160 | 88 | 6 | 12 | 161 | 11 | 161 | 1.42e-26 | 100 |
| MsG0180005633.01.T01 | MTR_2g088990 | 37.013 | 154 | 81 | 6 | 8 | 148 | 6 | 156 | 4.85e-24 | 94.7 |
| MsG0180005633.01.T01 | MTR_7g086280 | 36.571 | 175 | 104 | 4 | 1 | 173 | 1 | 170 | 3.67e-23 | 91.3 |
| MsG0180005633.01.T01 | MTR_1g105130 | 38.017 | 121 | 71 | 3 | 6 | 124 | 5 | 123 | 4.19e-23 | 90.5 |
| MsG0180005633.01.T01 | MTR_1g105120 | 38.017 | 121 | 71 | 3 | 6 | 124 | 5 | 123 | 4.19e-23 | 90.5 |
| MsG0180005633.01.T01 | MTR_7g086230 | 38.636 | 176 | 99 | 5 | 1 | 173 | 1 | 170 | 6.81e-23 | 90.5 |
| MsG0180005633.01.T01 | MTR_7g086160 | 38.095 | 126 | 73 | 4 | 1 | 123 | 1 | 124 | 1.55e-22 | 89.0 |
| MsG0180005633.01.T01 | MTR_6g083240 | 33.333 | 183 | 108 | 6 | 1 | 176 | 1 | 176 | 2.06e-22 | 89.0 |
| MsG0180005633.01.T01 | MTR_2g101300 | 34.266 | 143 | 84 | 4 | 19 | 158 | 21 | 156 | 2.83e-22 | 89.0 |
| MsG0180005633.01.T01 | MTR_7g086140 | 36.800 | 125 | 75 | 3 | 1 | 123 | 1 | 123 | 3.17e-22 | 88.2 |
| MsG0180005633.01.T01 | MTR_7g086190 | 36.800 | 125 | 75 | 3 | 1 | 123 | 1 | 123 | 3.17e-22 | 88.2 |
| MsG0180005633.01.T01 | MTR_4g078410 | 30.380 | 158 | 106 | 1 | 22 | 175 | 22 | 179 | 5.21e-22 | 88.2 |
| MsG0180005633.01.T01 | MTR_8g007035 | 36.842 | 114 | 67 | 4 | 12 | 123 | 11 | 121 | 6.67e-22 | 88.6 |
| MsG0180005633.01.T01 | MTR_1g090420 | 31.013 | 158 | 107 | 2 | 7 | 162 | 9 | 166 | 9.51e-22 | 88.6 |
| MsG0180005633.01.T01 | MTR_3g099570 | 35.664 | 143 | 85 | 5 | 5 | 145 | 4 | 141 | 1.14e-21 | 87.4 |
| MsG0180005633.01.T01 | MTR_2g043730 | 37.168 | 113 | 66 | 2 | 9 | 121 | 16 | 123 | 1.40e-21 | 85.5 |
| MsG0180005633.01.T01 | MTR_3g099580 | 41.584 | 101 | 56 | 3 | 22 | 122 | 23 | 120 | 1.88e-21 | 87.0 |
| MsG0180005633.01.T01 | MTR_1g090190 | 34.091 | 132 | 80 | 4 | 22 | 151 | 20 | 146 | 1.03e-20 | 84.7 |
| MsG0180005633.01.T01 | MTR_3g089005 | 38.393 | 112 | 64 | 2 | 10 | 121 | 18 | 124 | 1.07e-20 | 83.2 |
| MsG0180005633.01.T01 | MTR_7g086220 | 35.043 | 117 | 72 | 3 | 1 | 116 | 1 | 114 | 1.45e-20 | 84.0 |
| MsG0180005633.01.T01 | MTR_7g086100 | 40.299 | 134 | 71 | 4 | 7 | 140 | 14 | 138 | 9.78e-20 | 83.6 |
| MsG0180005633.01.T01 | MTR_8g089110 | 32.456 | 114 | 72 | 2 | 8 | 121 | 11 | 119 | 1.15e-19 | 80.5 |
| MsG0180005633.01.T01 | MTR_1g077790 | 35.976 | 164 | 99 | 4 | 25 | 183 | 29 | 191 | 1.87e-19 | 81.6 |
| MsG0180005633.01.T01 | MTR_1g014120 | 35.922 | 103 | 64 | 1 | 43 | 145 | 46 | 146 | 2.24e-19 | 81.3 |
| MsG0180005633.01.T01 | MTR_6g023760 | 36.275 | 102 | 61 | 3 | 22 | 122 | 23 | 121 | 4.39e-19 | 80.5 |
| MsG0180005633.01.T01 | MTR_8g086360 | 28.333 | 180 | 115 | 4 | 8 | 173 | 7 | 186 | 4.68e-19 | 80.9 |
| MsG0180005633.01.T01 | MTR_3g099680 | 35.833 | 120 | 72 | 4 | 6 | 122 | 5 | 122 | 4.74e-19 | 81.3 |
| MsG0180005633.01.T01 | MTR_3g089035 | 39.394 | 99 | 55 | 3 | 22 | 120 | 30 | 123 | 5.65e-19 | 79.0 |
| MsG0180005633.01.T01 | MTR_1g112700 | 33.065 | 124 | 76 | 3 | 8 | 126 | 12 | 133 | 6.22e-19 | 80.1 |
| MsG0180005633.01.T01 | MTR_3g099980 | 35.833 | 120 | 72 | 4 | 6 | 122 | 5 | 122 | 8.29e-19 | 80.9 |
| MsG0180005633.01.T01 | MTR_2g079030 | 28.144 | 167 | 114 | 2 | 1 | 163 | 1 | 165 | 2.31e-18 | 82.4 |
| MsG0180005633.01.T01 | MTR_3g105930 | 30.935 | 139 | 81 | 3 | 43 | 178 | 48 | 174 | 3.23e-18 | 78.2 |
| MsG0180005633.01.T01 | MTR_2g090580 | 30.899 | 178 | 106 | 4 | 1 | 161 | 1 | 178 | 3.36e-18 | 78.6 |
| MsG0180005633.01.T01 | MTR_8g088830 | 35.514 | 107 | 59 | 4 | 18 | 121 | 21 | 120 | 3.38e-18 | 76.6 |
| MsG0180005633.01.T01 | MTR_8g463180 | 29.851 | 134 | 91 | 2 | 4 | 134 | 1 | 134 | 3.39e-18 | 80.5 |
| MsG0180005633.01.T01 | MTR_3g099540 | 33.871 | 124 | 77 | 4 | 1 | 122 | 1 | 121 | 5.31e-18 | 76.6 |
| MsG0180005633.01.T01 | MTR_4g111640 | 31.210 | 157 | 97 | 4 | 25 | 177 | 32 | 181 | 8.34e-18 | 77.4 |
| MsG0180005633.01.T01 | MTR_4g077787 | 35.338 | 133 | 76 | 4 | 25 | 149 | 32 | 162 | 1.26e-17 | 76.6 |
| MsG0180005633.01.T01 | MTR_1g072180 | 38.614 | 101 | 40 | 1 | 22 | 122 | 21 | 99 | 1.34e-17 | 74.7 |
| MsG0180005633.01.T01 | MTR_4g081100 | 33.628 | 113 | 73 | 1 | 13 | 123 | 20 | 132 | 2.59e-17 | 76.6 |
| MsG0180005633.01.T01 | MTR_6g022170 | 38.235 | 102 | 58 | 2 | 25 | 123 | 34 | 133 | 3.30e-17 | 75.1 |
| MsG0180005633.01.T01 | MTR_6g080660 | 34.694 | 98 | 61 | 2 | 25 | 122 | 28 | 122 | 1.03e-16 | 75.1 |
| MsG0180005633.01.T01 | MTR_7g086090 | 38.636 | 132 | 71 | 4 | 7 | 138 | 14 | 135 | 1.35e-16 | 75.1 |
| MsG0180005633.01.T01 | MTR_2g043790 | 35.922 | 103 | 61 | 2 | 19 | 121 | 1 | 98 | 2.77e-16 | 71.2 |
| MsG0180005633.01.T01 | MTR_4g112310 | 32.117 | 137 | 86 | 3 | 41 | 177 | 2 | 131 | 6.36e-16 | 70.9 |
| MsG0180005633.01.T01 | MTR_4g114830 | 34.615 | 130 | 77 | 4 | 15 | 139 | 18 | 144 | 1.42e-15 | 70.9 |
| MsG0180005633.01.T01 | MTR_8g099220 | 30.709 | 127 | 76 | 3 | 6 | 122 | 3 | 127 | 1.98e-15 | 69.7 |
| MsG0180005633.01.T01 | MTR_4g124280 | 30.625 | 160 | 94 | 4 | 21 | 164 | 21 | 179 | 8.39e-15 | 70.5 |
| MsG0180005633.01.T01 | MTR_6g013420 | 30.303 | 132 | 83 | 4 | 13 | 142 | 26 | 150 | 9.08e-15 | 69.3 |
| MsG0180005633.01.T01 | MTR_0334s0010 | 29.310 | 116 | 80 | 2 | 8 | 122 | 11 | 125 | 1.96e-14 | 68.6 |
| MsG0180005633.01.T01 | MTR_8g094990 | 28.947 | 114 | 80 | 1 | 8 | 120 | 8 | 121 | 2.92e-14 | 69.3 |
| MsG0180005633.01.T01 | MTR_2g090575 | 29.801 | 151 | 105 | 1 | 8 | 157 | 8 | 158 | 4.55e-14 | 69.3 |
| MsG0180005633.01.T01 | MTR_5g088180 | 35.043 | 117 | 70 | 4 | 28 | 142 | 33 | 145 | 7.30e-14 | 66.6 |
| MsG0180005633.01.T01 | MTR_5g088170 | 35.043 | 117 | 70 | 4 | 28 | 142 | 20 | 132 | 9.69e-14 | 65.9 |
| MsG0180005633.01.T01 | MTR_4g067200 | 29.078 | 141 | 89 | 4 | 1 | 134 | 1 | 137 | 1.24e-13 | 65.9 |
| MsG0180005633.01.T01 | MTR_4g066110 | 29.078 | 141 | 89 | 4 | 1 | 134 | 1 | 137 | 1.24e-13 | 65.9 |
| MsG0180005633.01.T01 | MTR_6g013200 | 30.769 | 117 | 76 | 3 | 8 | 122 | 18 | 131 | 1.90e-13 | 65.5 |
| MsG0180005633.01.T01 | MTR_6g013170 | 30.233 | 129 | 82 | 5 | 24 | 150 | 30 | 152 | 4.07e-13 | 64.7 |
| MsG0180005633.01.T01 | MTR_2g025580 | 30.769 | 117 | 77 | 3 | 8 | 122 | 9 | 123 | 6.23e-13 | 63.9 |
| MsG0180005633.01.T01 | MTR_8g095013 | 29.940 | 167 | 103 | 3 | 8 | 161 | 8 | 173 | 2.85e-12 | 63.9 |
| MsG0180005633.01.T01 | MTR_2g083250 | 26.400 | 125 | 88 | 2 | 3 | 123 | 4 | 128 | 4.40e-12 | 63.2 |
| MsG0180005633.01.T01 | MTR_3g117110 | 27.333 | 150 | 92 | 6 | 4 | 146 | 3 | 142 | 1.41e-11 | 60.5 |
| MsG0180005633.01.T01 | MTR_8g095020 | 30.464 | 151 | 84 | 5 | 24 | 157 | 24 | 170 | 3.28e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005633.01.T01 | AT5G26330 | 58.182 | 165 | 68 | 1 | 10 | 174 | 9 | 172 | 6.47e-65 | 198 |
| MsG0180005633.01.T01 | AT2G31050 | 43.411 | 129 | 71 | 2 | 10 | 137 | 13 | 140 | 2.17e-34 | 120 |
| MsG0180005633.01.T01 | AT2G26720 | 38.298 | 141 | 82 | 2 | 1 | 137 | 1 | 140 | 2.46e-34 | 120 |
| MsG0180005633.01.T01 | AT2G32300 | 34.337 | 166 | 94 | 5 | 1 | 165 | 1 | 152 | 1.23e-30 | 112 |
| MsG0180005633.01.T01 | AT2G32300 | 34.337 | 166 | 94 | 5 | 1 | 165 | 31 | 182 | 3.91e-30 | 112 |
| MsG0180005633.01.T01 | AT3G27200 | 32.432 | 111 | 71 | 3 | 14 | 123 | 15 | 122 | 2.74e-23 | 91.3 |
| MsG0180005633.01.T01 | AT5G07475 | 34.839 | 155 | 87 | 5 | 14 | 168 | 19 | 159 | 2.43e-22 | 89.4 |
| MsG0180005633.01.T01 | AT3G17675 | 41.667 | 96 | 54 | 1 | 27 | 122 | 34 | 127 | 3.10e-22 | 87.4 |
| MsG0180005633.01.T01 | AT4G28365 | 30.508 | 177 | 107 | 4 | 1 | 161 | 1 | 177 | 1.07e-21 | 87.8 |
| MsG0180005633.01.T01 | AT4G31840 | 32.051 | 156 | 94 | 4 | 28 | 180 | 31 | 177 | 1.28e-21 | 87.0 |
| MsG0180005633.01.T01 | AT3G60270 | 37.864 | 103 | 61 | 2 | 21 | 123 | 22 | 121 | 3.72e-20 | 83.6 |
| MsG0180005633.01.T01 | AT3G53330 | 35.238 | 105 | 67 | 1 | 19 | 122 | 182 | 286 | 1.00e-19 | 84.7 |
| MsG0180005633.01.T01 | AT3G53330 | 39.080 | 87 | 47 | 3 | 7 | 92 | 8 | 89 | 2.37e-13 | 67.4 |
| MsG0180005633.01.T01 | AT1G45063 | 40.000 | 100 | 59 | 1 | 24 | 122 | 148 | 247 | 1.08e-19 | 84.0 |
| MsG0180005633.01.T01 | AT1G45063 | 32.031 | 128 | 81 | 3 | 1 | 123 | 1 | 127 | 1.53e-17 | 78.2 |
| MsG0180005633.01.T01 | AT1G45063 | 40.000 | 100 | 59 | 1 | 24 | 122 | 148 | 247 | 1.53e-19 | 85.1 |
| MsG0180005633.01.T01 | AT1G45063 | 32.031 | 128 | 81 | 3 | 1 | 123 | 1 | 127 | 2.30e-17 | 79.0 |
| MsG0180005633.01.T01 | AT5G53870 | 30.114 | 176 | 109 | 4 | 1 | 165 | 1 | 173 | 2.36e-19 | 84.3 |
| MsG0180005633.01.T01 | AT2G02850 | 31.858 | 113 | 72 | 2 | 8 | 120 | 19 | 126 | 3.44e-19 | 79.3 |
| MsG0180005633.01.T01 | AT3G20570 | 29.091 | 165 | 106 | 3 | 9 | 163 | 15 | 178 | 4.07e-19 | 81.3 |
| MsG0180005633.01.T01 | AT5G53870 | 30.114 | 176 | 109 | 4 | 1 | 165 | 1 | 173 | 4.39e-19 | 83.6 |
| MsG0180005633.01.T01 | AT2G25060 | 33.588 | 131 | 81 | 3 | 10 | 134 | 14 | 144 | 7.32e-19 | 80.1 |
| MsG0180005633.01.T01 | AT5G20230 | 33.858 | 127 | 79 | 2 | 25 | 150 | 25 | 147 | 1.71e-18 | 79.3 |
| MsG0180005633.01.T01 | AT3G60280 | 39.806 | 103 | 59 | 2 | 21 | 123 | 20 | 119 | 1.98e-18 | 79.7 |
| MsG0180005633.01.T01 | AT1G64640 | 29.341 | 167 | 92 | 4 | 4 | 161 | 6 | 155 | 3.67e-18 | 78.6 |
| MsG0180005633.01.T01 | AT1G72230 | 30.714 | 140 | 92 | 2 | 40 | 175 | 36 | 174 | 9.91e-18 | 77.0 |
| MsG0180005633.01.T01 | AT4G30590 | 31.538 | 130 | 81 | 4 | 1 | 123 | 1 | 129 | 1.14e-17 | 77.0 |
| MsG0180005633.01.T01 | AT4G27520 | 31.034 | 145 | 93 | 3 | 9 | 146 | 15 | 159 | 1.13e-16 | 77.0 |
| MsG0180005633.01.T01 | AT5G57920 | 31.579 | 95 | 61 | 1 | 43 | 133 | 44 | 138 | 2.34e-16 | 73.6 |
| MsG0180005633.01.T01 | AT5G15350 | 33.835 | 133 | 80 | 4 | 7 | 137 | 10 | 136 | 2.62e-16 | 73.2 |
| MsG0180005633.01.T01 | AT1G79800 | 30.882 | 136 | 85 | 3 | 9 | 137 | 18 | 151 | 4.01e-16 | 73.2 |
| MsG0180005633.01.T01 | AT5G57920 | 31.579 | 95 | 61 | 1 | 43 | 133 | 43 | 137 | 4.68e-16 | 72.8 |
| MsG0180005633.01.T01 | AT5G57920 | 30.357 | 112 | 72 | 2 | 28 | 133 | 59 | 170 | 9.73e-16 | 72.4 |
| MsG0180005633.01.T01 | AT2G44790 | 37.634 | 93 | 53 | 3 | 33 | 123 | 36 | 125 | 1.38e-15 | 72.0 |
| MsG0180005633.01.T01 | AT3G18590 | 34.286 | 105 | 59 | 5 | 25 | 123 | 27 | 127 | 4.36e-15 | 70.1 |
| MsG0180005633.01.T01 | AT4G32490 | 28.402 | 169 | 98 | 4 | 8 | 158 | 12 | 175 | 5.50e-15 | 70.5 |
| MsG0180005633.01.T01 | AT5G25090 | 33.333 | 81 | 54 | 0 | 43 | 123 | 47 | 127 | 5.80e-15 | 69.7 |
| MsG0180005633.01.T01 | AT2G23990 | 36.250 | 80 | 50 | 1 | 44 | 122 | 49 | 128 | 9.66e-15 | 69.7 |
| MsG0180005633.01.T01 | AT1G22480 | 31.217 | 189 | 106 | 7 | 1 | 183 | 1 | 171 | 1.18e-14 | 68.9 |
| MsG0180005633.01.T01 | AT5G14345 | 37.255 | 102 | 58 | 3 | 41 | 141 | 35 | 131 | 3.71e-14 | 66.6 |
| MsG0180005633.01.T01 | AT1G48940 | 31.538 | 130 | 77 | 6 | 5 | 126 | 4 | 129 | 1.11e-13 | 66.2 |
| MsG0180005633.01.T01 | AT4G01380 | 28.402 | 169 | 82 | 7 | 23 | 180 | 64 | 204 | 1.75e-13 | 66.2 |
| MsG0180005633.01.T01 | AT4G12880 | 33.010 | 103 | 64 | 3 | 22 | 122 | 26 | 125 | 1.09e-12 | 62.8 |
| MsG0180005633.01.T01 | AT2G27035 | 25.161 | 155 | 104 | 5 | 2 | 155 | 8 | 151 | 1.77e-11 | 60.1 |
| MsG0180005633.01.T01 | AT1G17800 | 29.167 | 120 | 78 | 4 | 8 | 123 | 21 | 137 | 5.87e-11 | 58.2 |
Find 41 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATGATTTGTTATCTTTA+TGG | 0.100250 | 1:-94301250 | None:intergenic |
| AAATGTGATCATATTATTAT+AGG | 0.226490 | 1:-94301697 | None:intergenic |
| TTGTAATTTGTTTACTAGTT+TGG | 0.295248 | 1:+94301555 | MsG0180005633.01.T01:three_prime_UTR |
| CTAGCTATATATGCTAAATA+AGG | 0.322395 | 1:+94301527 | MsG0180005633.01.T01:exon |
| TGTTTACTAGTTTGGTTTGT+GGG | 0.329596 | 1:+94301563 | MsG0180005633.01.T01:three_prime_UTR |
| TCTGTAATTCCTTTACTTGC+TGG | 0.332337 | 1:+94301618 | MsG0180005633.01.T01:three_prime_UTR |
| GTCACCAAGTTGGAAGTTCT+TGG | 0.351314 | 1:-94300335 | None:intergenic |
| ATCATCTTCACCTTCAGCAT+TGG | 0.417122 | 1:+94301371 | MsG0180005633.01.T01:CDS |
| TTGTTTACTAGTTTGGTTTG+TGG | 0.424475 | 1:+94301562 | MsG0180005633.01.T01:three_prime_UTR |
| TCATATTATTATAGGACAAC+TGG | 0.437115 | 1:-94301689 | None:intergenic |
| AGAGTCTATAGCCATGGCTT+TGG | 0.467228 | 1:+94300183 | MsG0180005633.01.T01:exon |
| CCAATTGCAACATTCACTAC+TGG | 0.482441 | 1:+94301219 | MsG0180005633.01.T01:CDS |
| TTCAGTGGTGTAGCATTACT+AGG | 0.484549 | 1:-94301444 | None:intergenic |
| TTCATATGCAGCTGTATACA+AGG | 0.487437 | 1:+94300252 | MsG0180005633.01.T01:CDS |
| CCAGTAGTGAATGTTGCAAT+TGG | 0.487702 | 1:-94301219 | None:intergenic |
| AGGTTGGTGATTCTGCTGGC+TGG | 0.497516 | 1:+94300272 | MsG0180005633.01.T01:CDS |
| TACAAGGTTGGTGATTCTGC+TGG | 0.511253 | 1:+94300268 | MsG0180005633.01.T01:CDS |
| ACCATAAAGATAACAAATCA+TGG | 0.515142 | 1:+94301249 | MsG0180005633.01.T01:CDS |
| TGTCCTGCTTGACAGTGTCC+AGG | 0.520727 | 1:-94301297 | None:intergenic |
| AGGAGAAGGTGCAGGTACAT+TGG | 0.525671 | 1:-94301424 | None:intergenic |
| GCTGGAACTGTAGCTTCAGC+AGG | 0.528803 | 1:-94301399 | None:intergenic |
| GGCTTTGGTAGAAAGAGCTA+TGG | 0.533866 | 1:+94300198 | MsG0180005633.01.T01:CDS |
| TAATTCTATCCAGCAAGTAA+AGG | 0.554771 | 1:-94301627 | None:intergenic |
| GCAGGAGAAGCCAATGCTGA+AGG | 0.557674 | 1:-94301381 | None:intergenic |
| GTACCTGGACACTGTCAAGC+AGG | 0.560336 | 1:+94301294 | MsG0180005633.01.T01:CDS |
| TATGCAGCTGTATACAAGGT+TGG | 0.562762 | 1:+94300256 | MsG0180005633.01.T01:CDS |
| TACTAATAGTGTCACCAAGT+TGG | 0.563363 | 1:-94300345 | None:intergenic |
| GCTACCAAGAACTTCCAACT+TGG | 0.573625 | 1:+94300331 | MsG0180005633.01.T01:CDS |
| GGTGCAGGTACATTGGAAGC+TGG | 0.574590 | 1:-94301417 | None:intergenic |
| AATGCTGAAGGTGAAGATGA+TGG | 0.589576 | 1:-94301369 | None:intergenic |
| TTTAAAGCAATACATTTCAG+TGG | 0.593570 | 1:-94301459 | None:intergenic |
| GGTGTAGCATTACTAGGAGA+AGG | 0.597398 | 1:-94301438 | None:intergenic |
| ATTAACAGCAAGAAATTGCA+TGG | 0.600755 | 1:-94301502 | None:intergenic |
| AGCTCTTTCTACCAAAGCCA+TGG | 0.608921 | 1:-94300194 | None:intergenic |
| ACACTGTCAAGCAGGACAGA+AGG | 0.613934 | 1:+94301302 | MsG0180005633.01.T01:CDS |
| TCTGCTGGCTGGACTACACT+TGG | 0.619967 | 1:+94300283 | MsG0180005633.01.T01:CDS |
| TCTTGCAGAGTCTATAGCCA+TGG | 0.624438 | 1:+94300177 | MsG0180005633.01.T01:exon |
| GAAGGTGAAGATGATGGAGC+AGG | 0.628782 | 1:-94301363 | None:intergenic |
| TGCATTGCATGACTTGTACA+TGG | 0.629046 | 1:-94301190 | None:intergenic |
| GTGTCACTCGCATCACATTG+TGG | 0.630592 | 1:-94301164 | None:intergenic |
| GCATTACTAGGAGAAGGTGC+AGG | 0.651848 | 1:-94301432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTAAGCATTTTTTTAA+GGG | + | Chr1:94300693-94300712 | MsG0180005633.01.T01:intron | 10.0% |
| !!! | TTAAATTAAGCATTTTTTTA+AGG | + | Chr1:94300692-94300711 | MsG0180005633.01.T01:intron | 10.0% |
| !!! | TTGTAAAATAATGTTAATTT+TGG | - | Chr1:94300490-94300509 | None:intergenic | 10.0% |
| !! | AAATGTGATCATATTATTAT+AGG | - | Chr1:94301700-94301719 | None:intergenic | 15.0% |
| !!! | AACATTATTTTACAATTCTA+TGG | + | Chr1:94300495-94300514 | MsG0180005633.01.T01:intron | 15.0% |
| !! | TAACTCAAAAAAAAATTGAG+AGG | + | Chr1:94301069-94301088 | MsG0180005633.01.T01:intron | 20.0% |
| !! | TATTTCTTCAACAAATTAGA+CGG | - | Chr1:94300774-94300793 | None:intergenic | 20.0% |
| !!! | TAACATTGACTACAAAAAAT+GGG | + | Chr1:94300306-94300325 | MsG0180005633.01.T01:CDS | 20.0% |
| !!! | TTGTAATTTGTTTACTAGTT+TGG | + | Chr1:94301555-94301574 | MsG0180005633.01.T01:three_prime_UTR | 20.0% |
| ! | ACCATAAAGATAACAAATCA+TGG | + | Chr1:94301249-94301268 | MsG0180005633.01.T01:CDS | 25.0% |
| ! | AGAAGAAGTAAAAACCAAAA+AGG | - | Chr1:94301589-94301608 | None:intergenic | 25.0% |
| ! | ATGAAAACAAAAAGTTGTGT+AGG | - | Chr1:94300656-94300675 | None:intergenic | 25.0% |
| ! | CTAGCTATATATGCTAAATA+AGG | + | Chr1:94301527-94301546 | MsG0180005633.01.T01:exon | 25.0% |
| ! | GAACAAATTAAACATGCAAT+TGG | - | Chr1:94300381-94300400 | None:intergenic | 25.0% |
| ! | TCATATTATTATAGGACAAC+TGG | - | Chr1:94301692-94301711 | None:intergenic | 25.0% |
| !! | ATCATGAAATTGATTTATCC+GGG | - | Chr1:94300878-94300897 | None:intergenic | 25.0% |
| !! | CATCATGAAATTGATTTATC+CGG | - | Chr1:94300879-94300898 | None:intergenic | 25.0% |
| !! | GTAACATTGACTACAAAAAA+TGG | + | Chr1:94300305-94300324 | MsG0180005633.01.T01:CDS | 25.0% |
| !! | TGTTGAAGAAATAGATCTTT+TGG | + | Chr1:94300781-94300800 | MsG0180005633.01.T01:intron | 25.0% |
| !! | TTTAAAGCAATACATTTCAG+TGG | - | Chr1:94301462-94301481 | None:intergenic | 25.0% |
| !! | TTTTCTAACATTGTCCAATT+TGG | + | Chr1:94300524-94300543 | MsG0180005633.01.T01:intron | 25.0% |
| !!! | ACCATGATTTGTTATCTTTA+TGG | - | Chr1:94301253-94301272 | None:intergenic | 25.0% |
| !!! | TATGGTTTTGTCTATAATGA+TGG | + | Chr1:94300216-94300235 | MsG0180005633.01.T01:CDS | 25.0% |
| !!! | TATTGCTTTAAAAATGATGC+TGG | + | Chr1:94301470-94301489 | MsG0180005633.01.T01:CDS | 25.0% |
| !!! | TTGGTTTTTACTTCTTCTAT+TGG | + | Chr1:94301591-94301610 | MsG0180005633.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTTTAAGGGAAACGTTAA+CGG | + | Chr1:94300705-94300724 | MsG0180005633.01.T01:intron | 25.0% |
| ATTAACAGCAAGAAATTGCA+TGG | - | Chr1:94301505-94301524 | None:intergenic | 30.0% | |
| ATTGGACAATGTTAGAAAAG+AGG | - | Chr1:94300523-94300542 | None:intergenic | 30.0% | |
| TAATTCTATCCAGCAAGTAA+AGG | - | Chr1:94301630-94301649 | None:intergenic | 30.0% | |
| TTAAACATGCAATTGGAGAA+AGG | - | Chr1:94300374-94300393 | None:intergenic | 30.0% | |
| ! | TGAGTTTTTCTGTACCAAAT+TGG | - | Chr1:94300541-94300560 | None:intergenic | 30.0% |
| !! | TGTAGGTCTTAATTAGTCTT+GGG | - | Chr1:94300639-94300658 | None:intergenic | 30.0% |
| !! | TGTTTACTAGTTTGGTTTGT+GGG | + | Chr1:94301563-94301582 | MsG0180005633.01.T01:three_prime_UTR | 30.0% |
| !! | TTGTTTACTAGTTTGGTTTG+TGG | + | Chr1:94301562-94301581 | MsG0180005633.01.T01:three_prime_UTR | 30.0% |
| !! | TTTTTAAGGGAAACGTTAAC+GGG | + | Chr1:94300706-94300725 | MsG0180005633.01.T01:intron | 30.0% |
| !!! | AAAAATGATGCTGGCTTTTT+GGG | + | Chr1:94301479-94301498 | MsG0180005633.01.T01:CDS | 30.0% |
| !!! | TAAAAATGATGCTGGCTTTT+TGG | + | Chr1:94301478-94301497 | MsG0180005633.01.T01:CDS | 30.0% |
| CACTATTGCACTATCTTTCA+TGG | + | Chr1:94300598-94300617 | MsG0180005633.01.T01:intron | 35.0% | |
| CATGAAAGATAGTGCAATAG+TGG | - | Chr1:94300600-94300619 | None:intergenic | 35.0% | |
| CTTGAAGCAAAAACATGGAA+AGG | - | Chr1:94300571-94300590 | None:intergenic | 35.0% | |
| GATCTGAATTCGAATTATCC+CGG | + | Chr1:94300857-94300876 | MsG0180005633.01.T01:intron | 35.0% | |
| TAAGGTAATGCAAGTGAAAG+TGG | - | Chr1:94300926-94300945 | None:intergenic | 35.0% | |
| TACTAATAGTGTCACCAAGT+TGG | - | Chr1:94300348-94300367 | None:intergenic | 35.0% | |
| TCTGTAATTCCTTTACTTGC+TGG | + | Chr1:94301618-94301637 | MsG0180005633.01.T01:three_prime_UTR | 35.0% | |
| TGCATTACCTTATTGTTCTG+TGG | + | Chr1:94300934-94300953 | MsG0180005633.01.T01:intron | 35.0% | |
| TTCATATGCAGCTGTATACA+AGG | + | Chr1:94300252-94300271 | MsG0180005633.01.T01:CDS | 35.0% | |
| ! | GTGTAGGTCTTAATTAGTCT+TGG | - | Chr1:94300640-94300659 | None:intergenic | 35.0% |
| !! | CTTTCCATGTTTTTGCTTCA+AGG | + | Chr1:94300569-94300588 | MsG0180005633.01.T01:intron | 35.0% |
| !!! | CACATTTTCTGAAGTTGGAA+AGG | + | Chr1:94300443-94300462 | MsG0180005633.01.T01:intron | 35.0% |
| !!! | GTGTTCACATTTTCTGAAGT+TGG | + | Chr1:94300438-94300457 | MsG0180005633.01.T01:intron | 35.0% |
| AACCATGCTCTCGATGATTT+AGG | - | Chr1:94301011-94301030 | None:intergenic | 40.0% | |
| AAGTTGGAAAGGTCCTTTCA+AGG | + | Chr1:94300454-94300473 | MsG0180005633.01.T01:intron | 40.0% | |
| AATGCTGAAGGTGAAGATGA+TGG | - | Chr1:94301372-94301391 | None:intergenic | 40.0% | |
| AGTTGGAAAGGTCCTTTCAA+GGG | + | Chr1:94300455-94300474 | MsG0180005633.01.T01:intron | 40.0% | |
| ATCATCTTCACCTTCAGCAT+TGG | + | Chr1:94301371-94301390 | MsG0180005633.01.T01:CDS | 40.0% | |
| CAACATGCAATGACTTTGTC+AGG | + | Chr1:94300981-94301000 | MsG0180005633.01.T01:intron | 40.0% | |
| CCAATTGCAACATTCACTAC+TGG | + | Chr1:94301219-94301238 | MsG0180005633.01.T01:CDS | 40.0% | |
| CCAGTAGTGAATGTTGCAAT+TGG | - | Chr1:94301222-94301241 | None:intergenic | 40.0% | |
| GAAGCAAAAACATGGAAAGG+AGG | - | Chr1:94300568-94300587 | None:intergenic | 40.0% | |
| GTAATGCAAGTGAAAGTGGT+GGG | - | Chr1:94300922-94300941 | None:intergenic | 40.0% | |
| TATGCAGCTGTATACAAGGT+TGG | + | Chr1:94300256-94300275 | MsG0180005633.01.T01:CDS | 40.0% | |
| TTCAGTGGTGTAGCATTACT+AGG | - | Chr1:94301447-94301466 | None:intergenic | 40.0% | |
| TTGCACTATCTTTCATGGCA+TGG | + | Chr1:94300603-94300622 | MsG0180005633.01.T01:intron | 40.0% | |
| ! | CAAAGCACCACAGAACAATA+AGG | - | Chr1:94300944-94300963 | None:intergenic | 40.0% |
| ! | GGTCATCACTTCTTCTTTTG+TGG | + | Chr1:94301270-94301289 | MsG0180005633.01.T01:CDS | 40.0% |
| ! | GTAGCCTTGAAGCAAAAACA+TGG | - | Chr1:94300576-94300595 | None:intergenic | 40.0% |
| ! | TGCATTGCATGACTTGTACA+TGG | - | Chr1:94301193-94301212 | None:intergenic | 40.0% |
| ! | TTCTTCTTTTGTGGTGTACC+TGG | + | Chr1:94301279-94301298 | MsG0180005633.01.T01:CDS | 40.0% |
| AGAGTCTATAGCCATGGCTT+TGG | + | Chr1:94300183-94300202 | MsG0180005633.01.T01:exon | 45.0% | |
| AGCTCTTTCTACCAAAGCCA+TGG | - | Chr1:94300197-94300216 | None:intergenic | 45.0% | |
| CATGCAATGACTTTGTCAGG+TGG | + | Chr1:94300984-94301003 | MsG0180005633.01.T01:intron | 45.0% | |
| GCTACCAAGAACTTCCAACT+TGG | + | Chr1:94300331-94300350 | MsG0180005633.01.T01:CDS | 45.0% | |
| GGTAATGCAAGTGAAAGTGG+TGG | - | Chr1:94300923-94300942 | None:intergenic | 45.0% | |
| GGTGTAGCATTACTAGGAGA+AGG | - | Chr1:94301441-94301460 | None:intergenic | 45.0% | |
| GTCCTAAATCATCGAGAGCA+TGG | + | Chr1:94301006-94301025 | MsG0180005633.01.T01:intron | 45.0% | |
| TCTTGCAGAGTCTATAGCCA+TGG | + | Chr1:94300177-94300196 | MsG0180005633.01.T01:exon | 45.0% | |
| TGGTTGTCTTCTCCCTTGAA+AGG | - | Chr1:94300470-94300489 | None:intergenic | 45.0% | |
| ! | GGCTTTGGTAGAAAGAGCTA+TGG | + | Chr1:94300198-94300217 | MsG0180005633.01.T01:CDS | 45.0% |
| ! | GTCACCAAGTTGGAAGTTCT+TGG | - | Chr1:94300338-94300357 | None:intergenic | 45.0% |
| !! | TACAAGGTTGGTGATTCTGC+TGG | + | Chr1:94300268-94300287 | MsG0180005633.01.T01:CDS | 45.0% |
| !!! | GTTTGGTTTGTGGGCCTTTT+TGG | + | Chr1:94301572-94301591 | MsG0180005633.01.T01:three_prime_UTR | 45.0% |
| ACACTGTCAAGCAGGACAGA+AGG | + | Chr1:94301302-94301321 | MsG0180005633.01.T01:CDS | 50.0% | |
| TGGTCTCGAGCTCGATTGAA+AGG | + | Chr1:94300801-94300820 | MsG0180005633.01.T01:intron | 50.0% | |
| ! | AGGAGAAGGTGCAGGTACAT+TGG | - | Chr1:94301427-94301446 | None:intergenic | 50.0% |
| ! | GCATTACTAGGAGAAGGTGC+AGG | - | Chr1:94301435-94301454 | None:intergenic | 50.0% |
| ! | GTGTCACTCGCATCACATTG+TGG | - | Chr1:94301167-94301186 | None:intergenic | 50.0% |
| !! | GAAGGTGAAGATGATGGAGC+AGG | - | Chr1:94301366-94301385 | None:intergenic | 50.0% |
| GCAGGAGAAGCCAATGCTGA+AGG | - | Chr1:94301384-94301403 | None:intergenic | 55.0% | |
| GCTGGAACTGTAGCTTCAGC+AGG | - | Chr1:94301402-94301421 | None:intergenic | 55.0% | |
| GGTGCAGGTACATTGGAAGC+TGG | - | Chr1:94301420-94301439 | None:intergenic | 55.0% | |
| GTACCTGGACACTGTCAAGC+AGG | + | Chr1:94301294-94301313 | MsG0180005633.01.T01:CDS | 55.0% | |
| TGTCCTGCTTGACAGTGTCC+AGG | - | Chr1:94301300-94301319 | None:intergenic | 55.0% | |
| ! | TCTGCTGGCTGGACTACACT+TGG | + | Chr1:94300283-94300302 | MsG0180005633.01.T01:CDS | 55.0% |
| !! | AGGTTGGTGATTCTGCTGGC+TGG | + | Chr1:94300272-94300291 | MsG0180005633.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 94300153 | 94301719 | 94300153 | ID=MsG0180005633.01;Name=MsG0180005633.01 |
| Chr1 | mRNA | 94300153 | 94301719 | 94300153 | ID=MsG0180005633.01.T01;Parent=MsG0180005633.01;Name=MsG0180005633.01.T01;_AED=0.29;_eAED=0.29;_QI=43|1|1|1|1|1|2|189|185 |
| Chr1 | exon | 94300153 | 94300364 | 94300153 | ID=MsG0180005633.01.T01:exon:10138;Parent=MsG0180005633.01.T01 |
| Chr1 | exon | 94301142 | 94301719 | 94301142 | ID=MsG0180005633.01.T01:exon:10139;Parent=MsG0180005633.01.T01 |
| Chr1 | five_prime_UTR | 94300153 | 94300195 | 94300153 | ID=MsG0180005633.01.T01:five_prime_utr;Parent=MsG0180005633.01.T01 |
| Chr1 | CDS | 94300196 | 94300364 | 94300196 | ID=MsG0180005633.01.T01:cds;Parent=MsG0180005633.01.T01 |
| Chr1 | CDS | 94301142 | 94301530 | 94301142 | ID=MsG0180005633.01.T01:cds;Parent=MsG0180005633.01.T01 |
| Chr1 | three_prime_UTR | 94301531 | 94301719 | 94301531 | ID=MsG0180005633.01.T01:three_prime_utr;Parent=MsG0180005633.01.T01 |
| Gene Sequence |
| Protein sequence |
