AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008697.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008697.01.T01 MTR_2g048360 88.540 637 32 3 1 598 1 635 0.0 1047
MsG0280008697.01.T01 MTR_5g022530 34.152 448 238 12 199 596 195 635 1.06e-61 216
MsG0280008697.01.T01 MTR_7g081705 31.222 442 244 10 208 596 405 839 3.69e-48 181
MsG0280008697.01.T01 MTR_8g006850 29.530 447 253 9 208 596 277 719 5.99e-42 161
MsG0280008697.01.T01 MTR_3g109450 28.051 467 264 12 188 594 248 702 2.79e-36 144
MsG0280008697.01.T01 MTR_4g012430 28.657 335 218 7 213 539 128 449 4.81e-30 124
MsG0280008697.01.T01 MTR_1g112850 26.667 375 240 9 207 554 273 639 4.68e-29 123
MsG0280008697.01.T01 MTR_2g102050 28.024 339 229 5 213 543 325 656 2.12e-28 121
MsG0280008697.01.T01 MTR_3g088190 27.701 361 225 7 208 542 454 804 2.43e-26 115
MsG0280008697.01.T01 MTR_4g127620 25.071 351 233 8 196 525 323 664 7.63e-26 113
MsG0280008697.01.T01 MTR_3g078830 29.283 321 203 7 293 596 444 757 5.95e-25 110
MsG0280008697.01.T01 MTR_8g091250 30.645 248 154 5 293 529 382 622 1.59e-24 108
MsG0280008697.01.T01 MTR_5g087740 30.833 240 150 4 293 520 428 663 1.88e-24 108
MsG0280008697.01.T01 MTR_5g098980 32.157 255 156 4 297 538 438 688 1.70e-23 105
MsG0280008697.01.T01 MTR_2g036920 27.222 360 214 10 201 524 496 843 2.47e-22 102
MsG0280008697.01.T01 MTR_2g036920 27.222 360 214 10 201 524 467 814 3.39e-22 102
MsG0280008697.01.T01 MTR_3g115120 23.939 330 218 7 296 598 362 685 1.21e-19 93.6
MsG0280008697.01.T01 MTR_3g096950 26.217 267 182 5 298 558 436 693 2.42e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008697.01.T01 AT2G34670 40.673 713 271 18 1 596 1 678 1.04e-135 412
MsG0280008697.01.T01 AT2G34670 43.304 575 216 16 1 500 1 540 7.22e-116 356
MsG0280008697.01.T01 AT3G51290 33.941 439 245 8 199 596 191 625 8.70e-66 227
MsG0280008697.01.T01 AT3G51290 33.941 439 245 8 199 596 191 625 4.83e-65 228
MsG0280008697.01.T01 AT3G51290 33.030 439 243 9 199 596 191 619 2.71e-60 212
MsG0280008697.01.T01 AT1G02110 30.453 486 284 10 158 596 221 699 4.62e-50 184
MsG0280008697.01.T01 AT3G60320 28.571 441 260 7 208 596 355 792 3.31e-40 157
MsG0280008697.01.T01 AT1G52320 27.246 345 230 6 210 543 328 662 1.70e-33 137
MsG0280008697.01.T01 AT1G52320 27.246 345 230 6 210 543 351 685 2.23e-33 136
MsG0280008697.01.T01 AT1G52320 27.246 345 230 6 210 543 351 685 2.23e-33 136
MsG0280008697.01.T01 AT1G52320 27.954 347 225 8 210 543 25 359 2.41e-33 133
MsG0280008697.01.T01 AT1G52320 27.954 347 225 8 210 543 25 359 2.41e-33 133
MsG0280008697.01.T01 AT1G77500 30.612 392 227 10 208 571 449 823 8.73e-33 135
MsG0280008697.01.T01 AT5G25590 29.240 342 221 7 209 539 330 661 3.30e-30 126
MsG0280008697.01.T01 AT4G35240 25.234 428 254 11 208 590 419 825 1.93e-27 118
MsG0280008697.01.T01 AT4G35240 25.234 428 254 11 208 590 419 825 1.93e-27 118
MsG0280008697.01.T01 AT4G35240 25.234 428 254 11 208 590 419 825 2.10e-27 118
MsG0280008697.01.T01 AT4G35240 25.234 428 254 11 208 590 419 825 2.10e-27 118
MsG0280008697.01.T01 AT1G21740 27.595 395 230 9 184 543 473 846 1.01e-26 116
MsG0280008697.01.T01 AT2G27090 30.189 318 183 7 293 592 424 720 3.69e-26 114
MsG0280008697.01.T01 AT2G27090 30.189 318 183 7 293 592 424 720 3.69e-26 114
MsG0280008697.01.T01 AT2G17110 26.761 426 245 15 213 593 314 717 4.21e-24 107
MsG0280008697.01.T01 AT4G39790 27.897 233 152 3 293 513 371 599 4.51e-20 94.7
MsG0280008697.01.T01 AT4G30130 29.435 248 157 4 293 524 397 642 4.05e-18 89.0
MsG0280008697.01.T01 AT4G30130 29.435 248 157 4 293 524 397 642 4.05e-18 89.0
MsG0280008697.01.T01 AT1G20530 26.198 313 201 9 297 592 310 609 3.90e-17 85.5
MsG0280008697.01.T01 AT2G19090 28.016 257 151 4 293 524 478 725 7.42e-17 85.1

Find 168 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTCCACTTGCTTCTTTA+AGG 0.121977 2:+36712688 None:intergenic
TGAAACAACTTCATCCATTT+TGG 0.154541 2:-36713666 MsG0280008697.01.T01:CDS
GCGACTGCCGCTCAACTTTC+TGG 0.157379 2:-36717518 MsG0280008697.01.T01:five_prime_UTR
AAACATCACTACATAAATTT+TGG 0.162424 2:-36717666 MsG0280008697.01.T01:five_prime_UTR
TTATACACGCTGAGGCTTTC+AGG 0.162797 2:+36716748 None:intergenic
TCGATCAAATGTTGAGAAAT+TGG 0.186597 2:-36713723 MsG0280008697.01.T01:CDS
CTCGGCCTGTTGAGCAATTA+TGG 0.187743 2:+36712879 None:intergenic
TAATCAACTCATCTTCAAAA+TGG 0.208562 2:-36717429 MsG0280008697.01.T01:exon
AGAGGTTGAGGTTGTGGTTT+TGG 0.243363 2:+36718577 None:intergenic
CTTCCTCTCAAACTCCAATT+TGG 0.258099 2:+36713805 None:intergenic
CGCTTTCAAATAAGCTAATA+AGG 0.286610 2:+36717301 None:intergenic
AAGACAGCCTCAGAAATTTA+TGG 0.291498 2:+36717549 None:intergenic
GGTGGGGAAGGTGGGGCTTC+AGG 0.300463 2:+36717200 None:intergenic
TTCATCCTCAAATTCAGTTT+TGG 0.303718 2:+36716968 None:intergenic
AGTCGTTTGAGGAGGAGAAT+TGG 0.309003 2:-36716998 MsG0280008697.01.T01:CDS
AAAGTGTGAAAGCAGATTAT+TGG 0.309966 2:-36712670 MsG0280008697.01.T01:CDS
TTGAGAGTGAGGCTTCTTAT+TGG 0.311587 2:-36713332 MsG0280008697.01.T01:CDS
GTCGTTTGAGGAGGAGAATT+GGG 0.314868 2:-36716997 MsG0280008697.01.T01:CDS
TTCATCTATAAGTTCCAAAA+TGG 0.322487 2:+36713652 None:intergenic
ACTCTTCTGCGGCAGAATTC+TGG 0.331983 2:-36716687 MsG0280008697.01.T01:CDS
CAGTGGGAGCTTGGGCTTGA+TGG 0.332230 2:-36713174 MsG0280008697.01.T01:CDS
AAATCAGGCGGTGGGGAAGG+TGG 0.336430 2:+36717191 None:intergenic
TTACATCAGCTTCTGAATCT+TGG 0.353547 2:+36716943 None:intergenic
AGAAAACTCGGCGTCATCTT+TGG 0.357338 2:+36715738 None:intergenic
GAATTAGACTTTGCCTCTAC+TGG 0.357502 2:-36717227 MsG0280008697.01.T01:CDS
GCTAAATACCCTTGCAGAAC+TGG 0.365688 2:+36715801 None:intergenic
AGAGGGTGAGGACATTGATT+TGG 0.376255 2:-36713762 MsG0280008697.01.T01:CDS
CGGCAGTTAATGCAACCAAC+TGG 0.389360 2:+36713618 None:intergenic
AGAAAAGGAGGCAGCGGCGG+AGG 0.389892 2:+36717164 None:intergenic
GAAAGCCTCAGCGTGTATAA+AGG 0.389967 2:-36716745 MsG0280008697.01.T01:CDS
TCAGAAATTTATGGAGCATC+AGG 0.395589 2:+36717558 None:intergenic
ACGTTCCATAATTGCTCAAC+AGG 0.401754 2:-36712884 MsG0280008697.01.T01:CDS
GGGAAGGTGGGGCTTCAGGC+AGG 0.409227 2:+36717204 None:intergenic
GGAGGAGGGAATTACCAAAT+TGG 0.413638 2:-36713819 MsG0280008697.01.T01:CDS
ATCAGGCGGTGGGGAAGGTG+GGG 0.414224 2:+36717193 None:intergenic
CTTAGAACATCAAACTAAGT+TGG 0.415821 2:-36718527 MsG0280008697.01.T01:five_prime_UTR
AGCGGCGGAGGTGGTAAATC+AGG 0.416274 2:+36717176 None:intergenic
CGCGTGCGTGCGTGCGTGCG+TGG 0.417043 2:+36718501 None:intergenic
CACTGAGGTTACTCAGCTGC+TGG 0.417437 2:+36713415 None:intergenic
AGAAGTTGTAGAGTCGTTTG+AGG 0.425062 2:-36717009 MsG0280008697.01.T01:CDS
AATCAGGCGGTGGGGAAGGT+GGG 0.425705 2:+36717192 None:intergenic
ACAGCAAGAGGTTGAGGTTG+TGG 0.427321 2:+36718571 None:intergenic
CGCTTTCATTGCCATTCCTT+AGG 0.430652 2:+36713229 None:intergenic
CATCTGCTGCAAATTGATCA+AGG 0.433756 2:-36717071 MsG0280008697.01.T01:CDS
ATTTGTGAACAGTGGGAGCT+TGG 0.436438 2:-36713183 MsG0280008697.01.T01:CDS
TTTGTGAACAGTGGGAGCTT+GGG 0.438067 2:-36713182 MsG0280008697.01.T01:CDS
AATCAACTCATCTTCAAAAT+GGG 0.454841 2:-36717428 MsG0280008697.01.T01:exon
AGGGTAAGAAGTACCTTATC+TGG 0.459508 2:+36713147 None:intergenic
AATCGCAACAAGAGTATGTA+AGG 0.460182 2:-36713284 MsG0280008697.01.T01:CDS
AACAGTACAGCAAGAGGTTG+AGG 0.462127 2:+36718565 None:intergenic
CAATGAGCTCCCGGCCTGCA+TGG 0.466880 2:+36715703 None:intergenic
TTAGAACATCAAACTAAGTT+GGG 0.467834 2:-36718526 MsG0280008697.01.T01:five_prime_UTR
AAAGCTATTCCCGTGATGAT+TGG 0.468773 2:-36716822 MsG0280008697.01.T01:CDS
ATCACGTAGCGGGAAGCAAC+CGG 0.469892 2:-36716910 MsG0280008697.01.T01:CDS
GGAGGTGGTAAATCAGGCGG+TGG 0.478919 2:+36717182 None:intergenic
TCATCAACTGGTTCTTTGAC+CGG 0.480247 2:+36716891 None:intergenic
CCCGGCCTGCATGGTTCACT+AGG 0.481968 2:+36715712 None:intergenic
GGGTATTTAGCGTACTATCA+TGG 0.482670 2:-36715789 MsG0280008697.01.T01:CDS
TTTCACTGATGCACCGCCGC+AGG 0.485850 2:+36713684 None:intergenic
GCAGAGGAACTATCATCAAC+TGG 0.489604 2:+36716879 None:intergenic
GAAACTTTACAAGGCAGTAA+AGG 0.489711 2:-36715647 MsG0280008697.01.T01:intron
CAGTTGGTTGCATTAACTGC+CGG 0.490052 2:-36713617 MsG0280008697.01.T01:CDS
GGTAAATCAGGCGGTGGGGA+AGG 0.491542 2:+36717188 None:intergenic
AGTTGTAGAGTCGTTTGAGG+AGG 0.494301 2:-36717006 MsG0280008697.01.T01:CDS
ACATCTCTTCGTGTCACTGA+TGG 0.494531 2:-36712592 MsG0280008697.01.T01:CDS
CCTAGTGAACCATGCAGGCC+GGG 0.499393 2:-36715712 MsG0280008697.01.T01:CDS
TCCTAGTGAACCATGCAGGC+CGG 0.503939 2:-36715713 MsG0280008697.01.T01:CDS
TGCTTCCTCTCAAGCAATTG+AGG 0.505979 2:-36712559 MsG0280008697.01.T01:CDS
AATAGCCTCAATTGCTTGAG+AGG 0.509454 2:+36712554 None:intergenic
AGAAACCAAAACTGAATTTG+AGG 0.510649 2:-36716973 MsG0280008697.01.T01:CDS
AAAGTCTAATTCTAATGTAT+CGG 0.518544 2:+36717238 None:intergenic
TACAATTCAGTTTGAGAGTG+AGG 0.520111 2:-36713343 MsG0280008697.01.T01:CDS
TTGAGCAATTATGGAACGTA+TGG 0.520980 2:+36712888 None:intergenic
ATTGATGAGGATGGAAGGGT+TGG 0.521693 2:-36717389 MsG0280008697.01.T01:CDS
AAGCTCCCACTGTTCACAAA+TGG 0.522693 2:+36713185 None:intergenic
ATTGCCATTCCTTAGGCAGT+TGG 0.523231 2:+36713236 None:intergenic
AAAGGAGGCAGCGGCGGAGG+TGG 0.526432 2:+36717167 None:intergenic
AGTTGGTTGCATTAACTGCC+GGG 0.528298 2:-36713616 MsG0280008697.01.T01:intron
ATGCAGTTAGTGAGTATCAA+TGG 0.528715 2:-36717586 MsG0280008697.01.T01:five_prime_UTR
GGTGGAACTAGAAGGAATGA+TGG 0.529715 2:+36718598 None:intergenic
TTCAGCTTACCAACTGCCTA+AGG 0.530755 2:-36713245 MsG0280008697.01.T01:CDS
TGATGGATGTGTGTACTGTC+TGG 0.531090 2:+36718615 None:intergenic
CCGTGATGATTGGTAGAAGC+GGG 0.533019 2:-36716812 MsG0280008697.01.T01:CDS
CATGCAGTTCAGTAAAGTAC+AGG 0.535225 2:+36718476 None:intergenic
ATCGTTGCTATTTCAACCTG+TGG 0.535495 2:-36717039 MsG0280008697.01.T01:CDS
CAGAATTCAGAATTGTATTG+TGG 0.537342 2:+36713388 None:intergenic
GGCAGTTAATGCAACCAACT+GGG 0.539937 2:+36713619 None:intergenic
CAAGTATTGATGAGGATGGA+AGG 0.542254 2:-36717394 MsG0280008697.01.T01:CDS
ACAACTTCTACTTTATCCAC+AGG 0.542390 2:+36717023 None:intergenic
ATGTAAGGACCCTCAGTAAG+TGG 0.544051 2:-36713269 MsG0280008697.01.T01:CDS
GTGTGGGAAGATCACGTAGC+GGG 0.550776 2:-36716920 MsG0280008697.01.T01:CDS
ACAGTTAGTTTGTAATAGAG+AGG 0.552074 2:-36717336 MsG0280008697.01.T01:CDS
GCTTGATGGATTACCAGATA+AGG 0.552790 2:-36713160 MsG0280008697.01.T01:intron
TTCAGAAGCTGATGTAAGTG+TGG 0.554428 2:-36716937 MsG0280008697.01.T01:CDS
GCATGGATGCCATCAGTCGC+AGG 0.557421 2:-36713448 MsG0280008697.01.T01:CDS
CATAATTGCTCAACAGGCCG+AGG 0.562768 2:-36712878 MsG0280008697.01.T01:CDS
CTAGTCCTAGTGAACCATGC+AGG 0.563303 2:-36715717 MsG0280008697.01.T01:CDS
AATGAAATACTAGAGAATGA+TGG 0.563894 2:-36717110 MsG0280008697.01.T01:CDS
GGCGTCATCTTTGGTGAACG+TGG 0.564520 2:+36715747 None:intergenic
AAGTATTGATGAGGATGGAA+GGG 0.564904 2:-36717393 MsG0280008697.01.T01:CDS
GGCTTCAGGCAGGCCAGTAG+AGG 0.565066 2:+36717214 None:intergenic
GCAAGAAAAGGAGGCAGCGG+CGG 0.566054 2:+36717161 None:intergenic
TCAGCAAGAAAAGGAGGCAG+CGG 0.569066 2:+36717158 None:intergenic
TAATTCTAATGTATCGGACT+CGG 0.570082 2:+36717244 None:intergenic
ATCAGTGACACGAAGAGATG+TGG 0.570760 2:+36712594 None:intergenic
TCGCACCATTTGTGAACAGT+GGG 0.573102 2:-36713190 MsG0280008697.01.T01:CDS
AGTGTGGCACAATGAGCTCC+CGG 0.577296 2:+36715694 None:intergenic
TTACCAAATTGGAGTTTGAG+AGG 0.577960 2:-36713808 MsG0280008697.01.T01:CDS
TCTGAGGTTATCAAGAGTCA+TGG 0.581424 2:+36712626 None:intergenic
AGATCAGTGCCTGCGACTGA+TGG 0.582431 2:+36713439 None:intergenic
TTAGCGTACTATCATGGAGT+AGG 0.582628 2:-36715783 MsG0280008697.01.T01:CDS
TTGAAAGCGTTGAGGAACAC+CGG 0.583723 2:-36717287 MsG0280008697.01.T01:CDS
AGAAGCCTTAAAGAAGCAAG+TGG 0.583882 2:-36712693 MsG0280008697.01.T01:CDS
ATATACAAGAGGAGTGAGGT+GGG 0.584281 2:+36718655 None:intergenic
TGGTAGAAGCGGGAGAACAT+TGG 0.584904 2:-36716802 MsG0280008697.01.T01:CDS
GAGGTGGTAAATCAGGCGGT+GGG 0.585878 2:+36717183 None:intergenic
CAAGAGAACCAGTTCTGCAA+GGG 0.586453 2:-36715809 MsG0280008697.01.T01:CDS
CATATGCAAGGAAAGGAAGA+AGG 0.587629 2:-36717366 MsG0280008697.01.T01:CDS
CCCGTGATGATTGGTAGAAG+CGG 0.592602 2:-36716813 MsG0280008697.01.T01:CDS
ACTGAGGTTACTCAGCTGCT+GGG 0.593378 2:+36713416 None:intergenic
TAGAAGCGGGAGAACATTGG+AGG 0.594332 2:-36716799 MsG0280008697.01.T01:CDS
CTTACCAACTGCCTAAGGAA+TGG 0.597362 2:-36713240 MsG0280008697.01.T01:CDS
GTAGGTTGTCACAAATGTGG+AGG 0.597775 2:-36713476 MsG0280008697.01.T01:intron
TTATCAAGTATTGATGAGGA+TGG 0.602269 2:-36717398 MsG0280008697.01.T01:CDS
GCAAGAGAACCAGTTCTGCA+AGG 0.603472 2:-36715810 MsG0280008697.01.T01:CDS
CCGCTTCTACCAATCATCAC+GGG 0.604064 2:+36716813 None:intergenic
TTTGTAGGTTGTCACAAATG+TGG 0.604629 2:-36713479 MsG0280008697.01.T01:intron
GAACTGCCTAAGTGTGGCAC+CGG 0.605074 2:+36717268 None:intergenic
AAGCTGAATCCACTTACTGA+GGG 0.607524 2:+36713260 None:intergenic
CCCGCTTCTACCAATCATCA+CGG 0.607752 2:+36716812 None:intergenic
TCAGAAGCTGATGTAAGTGT+GGG 0.608804 2:-36716936 MsG0280008697.01.T01:CDS
TAGCTTATTTGAAAGCGTTG+AGG 0.611440 2:-36717295 MsG0280008697.01.T01:CDS
TTCGCACCATTTGTGAACAG+TGG 0.620328 2:-36713191 MsG0280008697.01.T01:CDS
AATGCAATGCAATATACAAG+AGG 0.622332 2:+36718644 None:intergenic
TGGAAGGGTTGGCATATGCA+AGG 0.624183 2:-36717378 MsG0280008697.01.T01:CDS
TTCACTAGGACTAGAAAACT+CGG 0.624299 2:+36715726 None:intergenic
CTAAGGAATGGCAATGAAAG+CGG 0.626651 2:-36713228 MsG0280008697.01.T01:CDS
GATGTGGAAGTCTAGTTCTG+AGG 0.627153 2:+36712610 None:intergenic
CTCGGTGAACTGCCTAAGTG+TGG 0.628590 2:+36717262 None:intergenic
TCTAAACAAAGTAATAGCAG+AGG 0.632255 2:+36716863 None:intergenic
AGGTGGTAAATCAGGCGGTG+GGG 0.636641 2:+36717184 None:intergenic
TGATGCTCCATAAATTTCTG+AGG 0.637505 2:-36717556 MsG0280008697.01.T01:five_prime_UTR
GGGTTGGCATATGCAAGGAA+AGG 0.637575 2:-36717373 MsG0280008697.01.T01:CDS
TGTCATATAATGTAGGAGGA+GGG 0.638178 2:-36713833 MsG0280008697.01.T01:intron
CTGATTTGATAAGCCTGCGG+CGG 0.640810 2:-36713697 MsG0280008697.01.T01:CDS
ATACAGAACAGTACAGCAAG+AGG 0.640865 2:+36718559 None:intergenic
AACAACTTGTTACCAACACT+AGG 0.641249 2:-36717484 MsG0280008697.01.T01:five_prime_UTR
TGGAACGTATGGATAACAGA+AGG 0.642185 2:+36712899 None:intergenic
TTGTATTGTGGTTATCACTG+AGG 0.645449 2:+36713400 None:intergenic
GTTCTTATTGATATCAGCAG+CGG 0.646022 2:-36716714 MsG0280008697.01.T01:CDS
GATGTGTGTACTGTCTGGTG+TGG 0.646396 2:+36718620 None:intergenic
AATATACAAGAGGAGTGAGG+TGG 0.649601 2:+36718654 None:intergenic
GGCAGAGAAGAAACTTTACA+AGG 0.650354 2:-36715656 MsG0280008697.01.T01:CDS
GATTTCCTTTATACACGCTG+AGG 0.652486 2:+36716740 None:intergenic
TAAGCTGAATCCACTTACTG+AGG 0.654495 2:+36713259 None:intergenic
GCAGTTAATGCAACCAACTG+GGG 0.660306 2:+36713620 None:intergenic
AACTTGAAAGAAAGTTGCGG+AGG 0.663528 2:-36712828 MsG0280008697.01.T01:intron
AGAAGCGGGAGAACATTGGA+GGG 0.666824 2:-36716798 MsG0280008697.01.T01:CDS
GGAACACCGGTGCCACACTT+AGG 0.668962 2:-36717274 MsG0280008697.01.T01:CDS
TGTGTTATCAAGTATTGATG+AGG 0.669531 2:-36717402 MsG0280008697.01.T01:CDS
TATACAAGAGGAGTGAGGTG+GGG 0.670205 2:+36718656 None:intergenic
GGCGGAGGTGGTAAATCAGG+CGG 0.670962 2:+36717179 None:intergenic
CAAATGTGGAGGATAATGCA+TGG 0.676138 2:-36713465 MsG0280008697.01.T01:CDS
AAATGGTGCGAATAGAAGAG+TGG 0.683375 2:+36713202 None:intergenic
AGTCTGATTTGATAAGCCTG+CGG 0.688684 2:-36713700 MsG0280008697.01.T01:CDS
TGCAATATACAAGAGGAGTG+AGG 0.705065 2:+36718651 None:intergenic
GCAGCGGAGATACTCTTCTG+CGG 0.753633 2:-36716698 MsG0280008697.01.T01:CDS
AGTGTGGGAAGATCACGTAG+CGG 0.767022 2:-36716921 MsG0280008697.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAATATATAGAAAAAAA+TGG + Chr2:36713394-36713413 None:intergenic 10.0%
!!! AGAAATTTCAATAATTTTAA+AGG + Chr2:36714595-36714614 None:intergenic 10.0%
!! AAATTTCTTTATGATAGATT+AGG - Chr2:36714607-36714626 MsG0280008697.01.T01:intron 15.0%
!! ATAAGCTATAAATGTTATTA+TGG + Chr2:36714789-36714808 None:intergenic 15.0%
!! ATTGAAAAGGAAAAAAAAAA+AGG + Chr2:36713186-36713205 None:intergenic 15.0%
!! ATTTAATGCAAAAGATATTT+AGG - Chr2:36715764-36715783 MsG0280008697.01.T01:CDS 15.0%
!! GAAAACAAAAAAAATTACAA+GGG - Chr2:36716946-36716965 MsG0280008697.01.T01:CDS 15.0%
!! TGAAAACAAAAAAAATTACA+AGG - Chr2:36716945-36716964 MsG0280008697.01.T01:CDS 15.0%
!! TTATTTACTTACTTTACATT+TGG - Chr2:36717342-36717361 MsG0280008697.01.T01:CDS 15.0%
!! TTTAATGCAAAAGATATTTA+GGG - Chr2:36715765-36715784 MsG0280008697.01.T01:CDS 15.0%
!! AAAGTCTAATTCTAATGTAT+CGG + Chr2:36713991-36714010 None:intergenic 20.0%
!! AAGTGAAAACAAAATTGAAA+AGG + Chr2:36713199-36713218 None:intergenic 20.0%
!! ATATGTAGAATAAGTTTGAT+AGG + Chr2:36715273-36715292 None:intergenic 20.0%
!! CACACTTAAAAAATTATATG+CGG - Chr2:36715549-36715568 MsG0280008697.01.T01:intron 20.0%
!! TAATGAAAAACATTAGTTGT+TGG + Chr2:36715919-36715938 None:intergenic 20.0%
!! TAGGCTTATTTAAATTCAAA+AGG - Chr2:36717176-36717195 MsG0280008697.01.T01:CDS 20.0%
!! TATTTAGGGAAAAATAAATC+AGG - Chr2:36715779-36715798 MsG0280008697.01.T01:CDS 20.0%
!! TGAAAAAAAGTTATTGAAAC+AGG + Chr2:36715088-36715107 None:intergenic 20.0%
!!! AAACATCACTACATAAATTT+TGG - Chr2:36713560-36713579 MsG0280008697.01.T01:intron 20.0%
!!! CTGTTTATTGGTTTTATTAT+TGG + Chr2:36715609-36715628 None:intergenic 20.0%
!!! GGAATGATAATATTTTTTTC+TGG - Chr2:36718262-36718281 MsG0280008697.01.T01:intron 20.0%
!!! GGTTATAGTCTTATATATTA+TGG - Chr2:36717197-36717216 MsG0280008697.01.T01:CDS 20.0%
!!! TCATTTATTTATCTGGTTTT+TGG - Chr2:36717124-36717143 MsG0280008697.01.T01:CDS 20.0%
!!! TGGAAAAATGTAAATTCTTT+TGG - Chr2:36718130-36718149 MsG0280008697.01.T01:intron 20.0%
!!! TTTGAAGTCATTTATTTATC+TGG - Chr2:36717117-36717136 MsG0280008697.01.T01:CDS 20.0%
!!! TTTTAATACTCTTAAAACTG+AGG - Chr2:36714723-36714742 MsG0280008697.01.T01:intron 20.0%
!!! TTTTACAAATGATTTTTGAG+TGG - Chr2:36712933-36712952 MsG0280008697.01.T01:intron 20.0%
!!! TTTTCAAGCAAATATTAATG+TGG + Chr2:36715054-36715073 None:intergenic 20.0%
!!! TTTTCAATTTTGTTTTCACT+TGG - Chr2:36713198-36713217 MsG0280008697.01.T01:CDS 20.0%
! AAAAAACATAGTACAGAGAA+AGG + Chr2:36712838-36712857 None:intergenic 25.0%
! AAAAACTTGAAAGAAAGTTG+CGG - Chr2:36718395-36718414 MsG0280008697.01.T01:intron 25.0%
! AAAACATAAATGTTATGCTG+TGG + Chr2:36712979-36712998 None:intergenic 25.0%
! AAATCAGGAACAAAATTTCA+AGG - Chr2:36715794-36715813 MsG0280008697.01.T01:CDS 25.0%
! AATCAACTCATCTTCAAAAT+GGG - Chr2:36713798-36713817 MsG0280008697.01.T01:CDS 25.0%
! AATGAAATACTAGAGAATGA+TGG - Chr2:36714116-36714135 MsG0280008697.01.T01:intron 25.0%
! ATAAATGACTTCAAAGACAA+AGG + Chr2:36717112-36717131 None:intergenic 25.0%
! ATATTAGAAAACTGCAAACA+TGG - Chr2:36715703-36715722 MsG0280008697.01.T01:CDS 25.0%
! CTAAGAAAGAATAAAAGCAA+AGG + Chr2:36717159-36717178 None:intergenic 25.0%
! GATATTGCATATTATATGCA+GGG - Chr2:36713304-36713323 MsG0280008697.01.T01:CDS 25.0%
! GTTCAAATGTCATATAATGT+AGG - Chr2:36717386-36717405 MsG0280008697.01.T01:CDS 25.0%
! TAATCAACTCATCTTCAAAA+TGG - Chr2:36713797-36713816 MsG0280008697.01.T01:CDS 25.0%
! TTAGAACATCAAACTAAGTT+GGG - Chr2:36712700-36712719 MsG0280008697.01.T01:intron 25.0%
! TTATATCTGATTCATATCCT+AGG - Chr2:36717698-36717717 MsG0280008697.01.T01:five_prime_UTR 25.0%
! TTCATCTATAAGTTCCAAAA+TGG + Chr2:36717577-36717596 None:intergenic 25.0%
! TTTCGAAATGTTTGAATGTA+TGG - Chr2:36714758-36714777 MsG0280008697.01.T01:intron 25.0%
!! AGACAACATTCTAAAAAAGT+TGG - Chr2:36718372-36718391 MsG0280008697.01.T01:intron 25.0%
!! AGATGTGTAAATTTTATGAG+CGG - Chr2:36718241-36718260 MsG0280008697.01.T01:intron 25.0%
!! ATCACTACATAAATTTTGGA+GGG - Chr2:36713564-36713583 MsG0280008697.01.T01:intron 25.0%
!! ATTTTCAATTTCTCTTGGAT+TGG - Chr2:36713130-36713149 MsG0280008697.01.T01:intron 25.0%
!! TCAACATTTTCAATTTCTCT+TGG - Chr2:36713125-36713144 MsG0280008697.01.T01:intron 25.0%
!! TGTTTCTTTTGTTCTTTTGT+AGG - Chr2:36713481-36713500 MsG0280008697.01.T01:intron 25.0%
!! TTGGCAAAACTTTTATGTAT+GGG - Chr2:36718149-36718168 MsG0280008697.01.T01:intron 25.0%
!! TTTGGCAAAACTTTTATGTA+TGG - Chr2:36718148-36718167 MsG0280008697.01.T01:intron 25.0%
!!! AAAACTGTTGTTTGTTTTGT+AGG - Chr2:36717732-36717751 MsG0280008697.01.T01:intron 25.0%
!!! AGAAACCTTTTTTATGATGT+TGG + Chr2:36716355-36716374 None:intergenic 25.0%
!!! AGTTTTTTAAAGCAAAACCT+AGG + Chr2:36717718-36717737 None:intergenic 25.0%
!!! CGCATATAATTTTTTAAGTG+TGG + Chr2:36715551-36715570 None:intergenic 25.0%
!!! CTTTGCTTTTATTCTTTCTT+AGG - Chr2:36717157-36717176 MsG0280008697.01.T01:CDS 25.0%
!!! TGTTTGTTTCTTTTGATCAA+AGG - Chr2:36717304-36717323 MsG0280008697.01.T01:CDS 25.0%
AAAGGAGAAAGATAGAACAT+AGG + Chr2:36717094-36717113 None:intergenic 30.0%
AAAGTGTGAAAGCAGATTAT+TGG - Chr2:36718556-36718575 MsG0280008697.01.T01:five_prime_UTR 30.0%
AAATCTCATATTCATAGCTC+TGG + Chr2:36715216-36715235 None:intergenic 30.0%
AAATGATAACCACTATCCTT+AGG + Chr2:36714973-36714992 None:intergenic 30.0%
AAGTCTATCATAACGCATAT+AGG + Chr2:36715302-36715321 None:intergenic 30.0%
AATCTTTAATTAGTGCCCTA+AGG - Chr2:36714954-36714973 MsG0280008697.01.T01:intron 30.0%
AATGATAACCACTATCCTTA+GGG + Chr2:36714972-36714991 None:intergenic 30.0%
AATGCAATGCAATATACAAG+AGG + Chr2:36712585-36712604 None:intergenic 30.0%
AATGGAGAAATCTTTCATTG+TGG + Chr2:36713376-36713395 None:intergenic 30.0%
AATTTCAAGGCATATTGTTC+AGG - Chr2:36715807-36715826 MsG0280008697.01.T01:CDS 30.0%
AGAAACCAAAACTGAATTTG+AGG - Chr2:36714253-36714272 MsG0280008697.01.T01:intron 30.0%
AGAAATTCTTCACGGAATTA+TGG - Chr2:36716601-36716620 MsG0280008697.01.T01:intron 30.0%
AGTCTATCATAACGCATATA+GGG + Chr2:36715301-36715320 None:intergenic 30.0%
CAAATGTCATATAATGTAGG+AGG - Chr2:36717389-36717408 MsG0280008697.01.T01:CDS 30.0%
CAAATTCTAGATTCTTCCAT+TGG + Chr2:36716291-36716310 None:intergenic 30.0%
CAGAATTCAGAATTGTATTG+TGG + Chr2:36717841-36717860 None:intergenic 30.0%
CATATTTACTGTCAATCTTG+AGG + Chr2:36715963-36715982 None:intergenic 30.0%
CGCTTTCAAATAAGCTAATA+AGG + Chr2:36713928-36713947 None:intergenic 30.0%
CTCAAGATTGACAGTAAATA+TGG - Chr2:36715961-36715980 MsG0280008697.01.T01:intron 30.0%
CTTAGAACATCAAACTAAGT+TGG - Chr2:36712699-36712718 MsG0280008697.01.T01:intron 30.0%
GACAAATTTACAGTACTCTA+AGG + Chr2:36713447-36713466 None:intergenic 30.0%
GACATTTGAACAATGAGAAA+AGG + Chr2:36717377-36717396 None:intergenic 30.0%
GGATATTGCATATTATATGC+AGG - Chr2:36713303-36713322 MsG0280008697.01.T01:CDS 30.0%
TAATTCTAATGTATCGGACT+CGG + Chr2:36713985-36714004 None:intergenic 30.0%
TATATTATGGCTCAATTGAC+TGG - Chr2:36717210-36717229 MsG0280008697.01.T01:CDS 30.0%
TCGATCAAATGTTGAGAAAT+TGG - Chr2:36717503-36717522 MsG0280008697.01.T01:five_prime_UTR 30.0%
TCTAAACAAAGTAATAGCAG+AGG + Chr2:36714366-36714385 None:intergenic 30.0%
TGTCAAATTGTGTGAACATA+AGG + Chr2:36713057-36713076 None:intergenic 30.0%
TTCTATCTATCCCTTAGTTA+GGG - Chr2:36717260-36717279 MsG0280008697.01.T01:CDS 30.0%
! AAACTCTTTTCAGCAAGAAA+AGG + Chr2:36714080-36714099 None:intergenic 30.0%
! AAGGCTAAGATTTTTGACAT+CGG + Chr2:36716546-36716565 None:intergenic 30.0%
! ACGTTCAAAGATGATTTTTC+CGG - Chr2:36716225-36716244 MsG0280008697.01.T01:intron 30.0%
! CATCACTACATAAATTTTGG+AGG - Chr2:36713563-36713582 MsG0280008697.01.T01:intron 30.0%
! GAACTAAACTTTGAAGATGA+GGG - Chr2:36718456-36718475 MsG0280008697.01.T01:intron 30.0%
! TAATTTTCCAGAAAGTTGAG+CGG + Chr2:36713718-36713737 None:intergenic 30.0%
! TCAGATTTGAAACATCGTAT+AGG + Chr2:36714935-36714954 None:intergenic 30.0%
! TCCGCTATTTCATAAAATAG+CGG - Chr2:36718506-36718525 MsG0280008697.01.T01:five_prime_UTR 30.0%
! TGAAACAACTTCATCCATTT+TGG - Chr2:36717560-36717579 MsG0280008697.01.T01:five_prime_UTR 30.0%
! TGAACTAAACTTTGAAGATG+AGG - Chr2:36718455-36718474 MsG0280008697.01.T01:intron 30.0%
! TTCATCCTCAAATTCAGTTT+TGG + Chr2:36714261-36714280 None:intergenic 30.0%
!! ACAGTTAGTTTGTAATAGAG+AGG - Chr2:36713890-36713909 MsG0280008697.01.T01:intron 30.0%
!! ATAACTTGCTGAGAAAAACT+AGG - Chr2:36716899-36716918 MsG0280008697.01.T01:CDS 30.0%
!! CATAAATTTTGGAGGGTTTT+TGG - Chr2:36713571-36713590 MsG0280008697.01.T01:intron 30.0%
!! CGTTTATTTTCTGTGTGTAT+GGG - Chr2:36715351-36715370 MsG0280008697.01.T01:intron 30.0%
!! GATAGATTAGGTTTTGTCAT+TGG - Chr2:36714619-36714638 MsG0280008697.01.T01:intron 30.0%
!! TAACTTGCTGAGAAAAACTA+GGG - Chr2:36716900-36716919 MsG0280008697.01.T01:CDS 30.0%
!! TCCGCTATTTTATGAAATAG+CGG + Chr2:36718510-36718529 None:intergenic 30.0%
!! TCGTTTATTTTCTGTGTGTA+TGG - Chr2:36715350-36715369 MsG0280008697.01.T01:intron 30.0%
!! TGTGTTATCAAGTATTGATG+AGG - Chr2:36713824-36713843 MsG0280008697.01.T01:intron 30.0%
!! TTATCAAGTATTGATGAGGA+TGG - Chr2:36713828-36713847 MsG0280008697.01.T01:intron 30.0%
!!! ACATTTTTTTTCTTCTGCTC+TGG - Chr2:36715379-36715398 MsG0280008697.01.T01:intron 30.0%
!!! ATGTAGTGATGTTTGTTTTG+TGG + Chr2:36713554-36713573 None:intergenic 30.0%
!!! GATAGGTGTTTTGATATACA+TGG + Chr2:36716078-36716097 None:intergenic 30.0%
!!! GTTGGTTGTTTTTTTAGCAA+GGG + Chr2:36715901-36715920 None:intergenic 30.0%
!!! TACCAACACTAGGTTTTTTT+GGG - Chr2:36713752-36713771 MsG0280008697.01.T01:CDS 30.0%
!!! TCTTTTTCAGTTATGCTTGT+AGG - Chr2:36713616-36713635 MsG0280008697.01.T01:intron 30.0%
!!! TGTTGGTTGTTTTTTTAGCA+AGG + Chr2:36715902-36715921 None:intergenic 30.0%
!!! TTACCAACACTAGGTTTTTT+TGG - Chr2:36713751-36713770 MsG0280008697.01.T01:CDS 30.0%
!!! TTTTAGAATGTTGTCTTCCT+CGG + Chr2:36718368-36718387 None:intergenic 30.0%
AAACATCAAGCAATGGCTTA+GGG + Chr2:36716739-36716758 None:intergenic 35.0%
AACCCAAAAAAACCTAGTGT+TGG + Chr2:36713757-36713776 None:intergenic 35.0%
AACTAGCAAACAAAGTTCAG+AGG + Chr2:36713228-36713247 None:intergenic 35.0%
AAGACAGCCTCAGAAATTTA+TGG + Chr2:36713680-36713699 None:intergenic 35.0%
ACAACTTCTACTTTATCCAC+AGG + Chr2:36714206-36714225 None:intergenic 35.0%
ACAGAAAAGACAGAAGCAAA+AGG + Chr2:36714655-36714674 None:intergenic 35.0%
ACATTTCTCTCTCATCTTCT+TGG - Chr2:36712793-36712812 MsG0280008697.01.T01:intron 35.0%
ACTTTCCACTTGCTTCTTTA+AGG + Chr2:36718541-36718560 None:intergenic 35.0%
ATCGTCATTGAAAAAGCAAG+AGG - Chr2:36717446-36717465 MsG0280008697.01.T01:five_prime_UTR 35.0%
ATGCAGCCCAAAAATATTTG+GGG + Chr2:36715733-36715752 None:intergenic 35.0%
ATGCAGTTAGTGAGTATCAA+TGG - Chr2:36713640-36713659 MsG0280008697.01.T01:CDS 35.0%
ATGTCATATAATGTAGGAGG+AGG - Chr2:36717392-36717411 MsG0280008697.01.T01:CDS 35.0%
ATTCTTCACGGAATTATGGA+TGG - Chr2:36716605-36716624 MsG0280008697.01.T01:intron 35.0%
CAAACGAAAGATGGTGAAAA+GGG + Chr2:36717071-36717090 None:intergenic 35.0%
CAAGGCCAACATCATAAAAA+AGG - Chr2:36716347-36716366 MsG0280008697.01.T01:intron 35.0%
CAATATGCTGGACAGTAATT+AGG - Chr2:36715176-36715195 MsG0280008697.01.T01:intron 35.0%
CAGCATCATAGACTGTTTAT+TGG + Chr2:36715621-36715640 None:intergenic 35.0%
CATGCAGCCCAAAAATATTT+GGG + Chr2:36715734-36715753 None:intergenic 35.0%
CATTTCAGACTACAATATGC+TGG - Chr2:36715164-36715183 MsG0280008697.01.T01:intron 35.0%
CATTTCTCTCTCATCTTCTT+GGG - Chr2:36712794-36712813 MsG0280008697.01.T01:intron 35.0%
CGAAATCTGAGAAATATACC+CGG + Chr2:36717631-36717650 None:intergenic 35.0%
CTTCTATCTATCCCTTAGTT+AGG - Chr2:36717259-36717278 MsG0280008697.01.T01:CDS 35.0%
GAAACTTTACAAGGCAGTAA+AGG - Chr2:36715579-36715598 MsG0280008697.01.T01:intron 35.0%
GACTGTTTGGATAAGATTCA+AGG + Chr2:36716444-36716463 None:intergenic 35.0%
GGAAAAATCATCTTTGAACG+TGG + Chr2:36716226-36716245 None:intergenic 35.0%
GTTCTTATTGATATCAGCAG+CGG - Chr2:36714512-36714531 MsG0280008697.01.T01:intron 35.0%
TAAATGTTATGCTGTGGTAC+TGG + Chr2:36712973-36712992 None:intergenic 35.0%
TACAATTCAGTTTGAGAGTG+AGG - Chr2:36717883-36717902 MsG0280008697.01.T01:intron 35.0%
TCATGCAGCCCAAAAATATT+TGG + Chr2:36715735-36715754 None:intergenic 35.0%
TCCACTCTTAACTAACAAGT+TGG + Chr2:36716790-36716809 None:intergenic 35.0%
TCCATTCGAAAAACAAAGCA+TGG + Chr2:36718114-36718133 None:intergenic 35.0%
TCGTCATTGAAAAAGCAAGA+GGG - Chr2:36717447-36717466 MsG0280008697.01.T01:five_prime_UTR 35.0%
TGATGCTCCATAAATTTCTG+AGG - Chr2:36713670-36713689 MsG0280008697.01.T01:CDS 35.0%
TGTCATATAATGTAGGAGGA+GGG - Chr2:36717393-36717412 MsG0280008697.01.T01:CDS 35.0%
TTACATCAGCTTCTGAATCT+TGG + Chr2:36714286-36714305 None:intergenic 35.0%
TTACCAAATTGGAGTTTGAG+AGG - Chr2:36717418-36717437 MsG0280008697.01.T01:exon 35.0%
TTCACTAGGACTAGAAAACT+CGG + Chr2:36715503-36715522 None:intergenic 35.0%
TTGAGCAATTATGGAACGTA+TGG + Chr2:36718341-36718360 None:intergenic 35.0%
TTGCGCTAAACACTTCTTAT+TGG - Chr2:36718186-36718205 MsG0280008697.01.T01:intron 35.0%
TTGTATTGTGGTTATCACTG+AGG + Chr2:36717829-36717848 None:intergenic 35.0%
TTTGTAGGTTGTCACAAATG+TGG - Chr2:36717747-36717766 MsG0280008697.01.T01:intron 35.0%
! AATCGCAACAAGAGTATGTA+AGG - Chr2:36717942-36717961 MsG0280008697.01.T01:intron 35.0%
! CAATCATTTTCCAGAGAGAA+CGG - Chr2:36716658-36716677 MsG0280008697.01.T01:intron 35.0%
! CTTTGTTTGCTAGTTTGAAG+AGG - Chr2:36713233-36713252 MsG0280008697.01.T01:CDS 35.0%
! GCTCAATTGACTGGTATTTT+TGG - Chr2:36717219-36717238 MsG0280008697.01.T01:CDS 35.0%
! TCAGAAATTTATGGAGCATC+AGG + Chr2:36713671-36713690 None:intergenic 35.0%
! TGCTTCTGTCTTTTCTGTAT+TGG - Chr2:36714657-36714676 MsG0280008697.01.T01:intron 35.0%
! TTTACCCATGGAGTATTCTT+TGG + Chr2:36716322-36716341 None:intergenic 35.0%
! TTTGCTAGTTTGAAGAGGAA+GGG - Chr2:36713238-36713257 MsG0280008697.01.T01:CDS 35.0%
!! AACAACTTGTTACCAACACT+AGG - Chr2:36713742-36713761 MsG0280008697.01.T01:CDS 35.0%
!! AAGTATTGATGAGGATGGAA+GGG - Chr2:36713833-36713852 MsG0280008697.01.T01:intron 35.0%
!! AGTACTCTAAGGCTTTGTTT+GGG + Chr2:36713436-36713455 None:intergenic 35.0%
!! CATAGTTGGTAAAAACCAGA+CGG - Chr2:36716817-36716836 MsG0280008697.01.T01:CDS 35.0%
!! TAGCTTATTTGAAAGCGTTG+AGG - Chr2:36713931-36713950 MsG0280008697.01.T01:intron 35.0%
!! TCCAACTTGTTAGTTAAGAG+TGG - Chr2:36716786-36716805 MsG0280008697.01.T01:CDS 35.0%
!! TTTATGATGTTGGCCTTGTA+TGG + Chr2:36716345-36716364 None:intergenic 35.0%
!!! AAATATTTTTGGGCTGCATG+AGG - Chr2:36715734-36715753 MsG0280008697.01.T01:CDS 35.0%
!!! AATATTTTTGGGCTGCATGA+GGG - Chr2:36715735-36715754 MsG0280008697.01.T01:CDS 35.0%
!!! CAGAAGGTTTTTTATCGCAT+CGG + Chr2:36718314-36718333 None:intergenic 35.0%
!!! GAAAAGAGTTTTGTTCACGT+TGG - Chr2:36714089-36714108 MsG0280008697.01.T01:intron 35.0%
!!! GTGATGTTTGTTTTGTGGTT+TGG + Chr2:36713549-36713568 None:intergenic 35.0%
!!! GTTGTTTTTTTAGCAAGGGT+CGG + Chr2:36715897-36715916 None:intergenic 35.0%
!!! TCTTTGTTTTGTGAAGCATG+AGG - Chr2:36712859-36712878 MsG0280008697.01.T01:CDS 35.0%
!!! TTTTGGGTTATCTTTGTCTG+TGG - Chr2:36713768-36713787 MsG0280008697.01.T01:CDS 35.0%
!!! TTTTTTCTGGCACTTTGATG+TGG - Chr2:36718275-36718294 MsG0280008697.01.T01:intron 35.0%
AAAGCTATTCCCGTGATGAT+TGG - Chr2:36714404-36714423 MsG0280008697.01.T01:intron 40.0%
AAATGGTGCGAATAGAAGAG+TGG + Chr2:36718027-36718046 None:intergenic 40.0%
AACAATTGCCACCCTAACTA+AGG + Chr2:36717274-36717293 None:intergenic 40.0%
AACTTGAAAGAAAGTTGCGG+AGG - Chr2:36718398-36718417 MsG0280008697.01.T01:intron 40.0%
AAGACAGAAGCAAAAGGTCA+TGG + Chr2:36714649-36714668 None:intergenic 40.0%
AAGCTGAATCCACTTACTGA+GGG + Chr2:36717969-36717988 None:intergenic 40.0%
AATAGCCTCAATTGCTTGAG+AGG + Chr2:36718675-36718694 None:intergenic 40.0%
AATATACAAGAGGAGTGAGG+TGG + Chr2:36712575-36712594 None:intergenic 40.0%
AATCGATGTTCTTGGTGAGA+TGG - Chr2:36716697-36716716 MsG0280008697.01.T01:CDS 40.0%
AATGTGATAGAGAGAGAGAG+AGG + Chr2:36713093-36713112 None:intergenic 40.0%
AATTAGTGCCCTAAGGATAG+TGG - Chr2:36714961-36714980 MsG0280008697.01.T01:intron 40.0%
ACAATTGCCACCCTAACTAA+GGG + Chr2:36717273-36717292 None:intergenic 40.0%
ACGAACCAAAGAATACTCCA+TGG - Chr2:36716314-36716333 MsG0280008697.01.T01:intron 40.0%
ACGAGATTTACCATGCTTTC+GGG - Chr2:36716137-36716156 MsG0280008697.01.T01:intron 40.0%
ACGTTCCATAATTGCTCAAC+AGG - Chr2:36718342-36718361 MsG0280008697.01.T01:intron 40.0%
AGAAGCCTTAAAGAAGCAAG+TGG - Chr2:36718533-36718552 MsG0280008697.01.T01:five_prime_UTR 40.0%
AGAAGTTGTAGAGTCGTTTG+AGG - Chr2:36714217-36714236 MsG0280008697.01.T01:intron 40.0%
AGAGTTGAAAGTAGGTCCAA+TGG - Chr2:36716272-36716291 MsG0280008697.01.T01:intron 40.0%
AGGAAAGAATGGGATGACTT+TGG - Chr2:36713263-36713282 MsG0280008697.01.T01:CDS 40.0%
AGGAAGGGAAAGGAAAGAAT+GGG - Chr2:36713253-36713272 MsG0280008697.01.T01:CDS 40.0%
AGGTTTGCCAAAATCTCATG+AGG + Chr2:36716503-36716522 None:intergenic 40.0%
AGTGGCGAAGAAATTCTTCA+CGG - Chr2:36716593-36716612 MsG0280008697.01.T01:intron 40.0%
ATACAGAACAGTACAGCAAG+AGG + Chr2:36712670-36712689 None:intergenic 40.0%
ATATACAAGAGGAGTGAGGT+GGG + Chr2:36712574-36712593 None:intergenic 40.0%
ATCTGATTCAGCCATGAGTT+AGG - Chr2:36716848-36716867 MsG0280008697.01.T01:CDS 40.0%
ATGAAGGTAATATAAGCCCC+AGG - Chr2:36718481-36718500 MsG0280008697.01.T01:five_prime_UTR 40.0%
ATGTGATAGAGAGAGAGAGA+GGG + Chr2:36713092-36713111 None:intergenic 40.0%
ATTGAAAAAGCAAGAGGGTG+AGG - Chr2:36717452-36717471 MsG0280008697.01.T01:five_prime_UTR 40.0%
CAAAACACCTATCGATAGTG+TGG - Chr2:36716085-36716104 MsG0280008697.01.T01:intron 40.0%
CAAAATCTCATGAGGGTTGT+TGG + Chr2:36716495-36716514 None:intergenic 40.0%
CAAACATCAAGCAATGGCTT+AGG + Chr2:36716740-36716759 None:intergenic 40.0%
CAAATGTGGAGGATAATGCA+TGG - Chr2:36717761-36717780 MsG0280008697.01.T01:intron 40.0%
CATATGCAAGGAAAGGAAGA+AGG - Chr2:36713860-36713879 MsG0280008697.01.T01:intron 40.0%
CATCTGCTGCAAATTGATCA+AGG - Chr2:36714155-36714174 MsG0280008697.01.T01:intron 40.0%
CATGCAGTTCAGTAAAGTAC+AGG + Chr2:36712753-36712772 None:intergenic 40.0%
CCATCTACTACTACTCAGAA+TGG + Chr2:36715019-36715038 None:intergenic 40.0%
CCATTCTGAGTAGTAGTAGA+TGG - Chr2:36715016-36715035 MsG0280008697.01.T01:intron 40.0%
CGAACCAAAGAATACTCCAT+GGG - Chr2:36716315-36716334 MsG0280008697.01.T01:intron 40.0%
CTAAGGAATGGCAATGAAAG+CGG - Chr2:36717998-36718017 MsG0280008697.01.T01:intron 40.0%
CTACTCAGAATGGTATTCAG+TGG + Chr2:36715009-36715028 None:intergenic 40.0%
CTTCCTCTCAAACTCCAATT+TGG + Chr2:36717424-36717443 None:intergenic 40.0%
GAACATAGGCAAACGAAAGA+TGG + Chr2:36717080-36717099 None:intergenic 40.0%
GAATTAGACTTTGCCTCTAC+TGG - Chr2:36713999-36714018 MsG0280008697.01.T01:intron 40.0%
GACATTGCAGAGTTGAAAGT+AGG - Chr2:36716264-36716283 MsG0280008697.01.T01:intron 40.0%
GACGAGATTTACCATGCTTT+CGG - Chr2:36716136-36716155 MsG0280008697.01.T01:intron 40.0%
GATTTCCTTTATACACGCTG+AGG + Chr2:36714489-36714508 None:intergenic 40.0%
GCAAACGAAAGATGGTGAAA+AGG + Chr2:36717072-36717091 None:intergenic 40.0%
GGAAAGAATGGGATGACTTT+GGG - Chr2:36713264-36713283 MsG0280008697.01.T01:CDS 40.0%
GGCAGAGAAGAAACTTTACA+AGG - Chr2:36715570-36715589 MsG0280008697.01.T01:intron 40.0%
GGGTATTTAGCGTACTATCA+TGG - Chr2:36715437-36715456 MsG0280008697.01.T01:intron 40.0%
GGTCATCAAACATCAAGCAA+TGG + Chr2:36716746-36716765 None:intergenic 40.0%
GGTTTGCCAAAATCTCATGA+GGG + Chr2:36716502-36716521 None:intergenic 40.0%
GTCTACTTTGTTGCGTATAC+CGG + Chr2:36716247-36716266 None:intergenic 40.0%
TAAGCTGAATCCACTTACTG+AGG + Chr2:36717970-36717989 None:intergenic 40.0%
TAGTTTGAAGAGGAAGGGAA+AGG - Chr2:36713243-36713262 MsG0280008697.01.T01:CDS 40.0%
TATCTATCCCTTAGTTAGGG+TGG - Chr2:36717263-36717282 MsG0280008697.01.T01:CDS 40.0%
TCAGAAGCTGATGTAAGTGT+GGG - Chr2:36714290-36714309 MsG0280008697.01.T01:intron 40.0%
TCTGATTCAGCCATGAGTTA+GGG - Chr2:36716849-36716868 MsG0280008697.01.T01:CDS 40.0%
TGATGACCATGAGTGATAGT+TGG - Chr2:36716758-36716777 MsG0280008697.01.T01:CDS 40.0%
TGCAATATACAAGAGGAGTG+AGG + Chr2:36712578-36712597 None:intergenic 40.0%
TGGAACGTATGGATAACAGA+AGG + Chr2:36718330-36718349 None:intergenic 40.0%
TTAGCGTACTATCATGGAGT+AGG - Chr2:36715443-36715462 MsG0280008697.01.T01:intron 40.0%
TTAGGGAAGAGAGAAATGTC+TGG - Chr2:36716866-36716885 MsG0280008697.01.T01:CDS 40.0%
TTCAGAAGCTGATGTAAGTG+TGG - Chr2:36714289-36714308 MsG0280008697.01.T01:intron 40.0%
TTCTCGCTGTTCATATTCCT+TGG - Chr2:36716371-36716390 MsG0280008697.01.T01:intron 40.0%
TTGAGAGTGAGGCTTCTTAT+TGG - Chr2:36717894-36717913 MsG0280008697.01.T01:intron 40.0%
TTGGCATAACAGTAAGAGCA+AGG - Chr2:36714823-36714842 MsG0280008697.01.T01:intron 40.0%
TTGTGAGACTGTTTGGAAGA+AGG + Chr2:36716565-36716584 None:intergenic 40.0%
TTTCTCTCTTCCCTAACTCA+TGG + Chr2:36716862-36716881 None:intergenic 40.0%
TTTGAAGATGAGGGTGATGA+AGG - Chr2:36718465-36718484 MsG0280008697.01.T01:intron 40.0%
! AGTCTGATTTGATAAGCCTG+CGG - Chr2:36717526-36717545 MsG0280008697.01.T01:five_prime_UTR 40.0%
! CAACAACCCTCATGAGATTT+TGG - Chr2:36716493-36716512 MsG0280008697.01.T01:intron 40.0%
! CTCTTTTCAGCAAGAAAAGG+AGG + Chr2:36714077-36714096 None:intergenic 40.0%
! CTTTCATTGTGGAGTATCTG+AGG + Chr2:36713365-36713384 None:intergenic 40.0%
! GCTTTTCGAAGTGGTGAATA+TGG + Chr2:36716168-36716187 None:intergenic 40.0%
! GGTGTGCCCCAAATATTTTT+GGG - Chr2:36715724-36715743 MsG0280008697.01.T01:CDS 40.0%
! GTTTGCTAGTTTGAAGAGGA+AGG - Chr2:36713237-36713256 MsG0280008697.01.T01:CDS 40.0%
! TCATCAACTGGTTCTTTGAC+CGG + Chr2:36714338-36714357 None:intergenic 40.0%
! TCTGAGGTTATCAAGAGTCA+TGG + Chr2:36718603-36718622 None:intergenic 40.0%
! TGGTGTGCCCCAAATATTTT+TGG - Chr2:36715723-36715742 MsG0280008697.01.T01:CDS 40.0%
! TTGTCACTTGTGAGACTGTT+TGG + Chr2:36716572-36716591 None:intergenic 40.0%
!! AGGGTAAGAAGTACCTTATC+TGG + Chr2:36718082-36718101 None:intergenic 40.0%
!! ATCGTTGCTATTTCAACCTG+TGG - Chr2:36714187-36714206 MsG0280008697.01.T01:intron 40.0%
!! CAAGTATTGATGAGGATGGA+AGG - Chr2:36713832-36713851 MsG0280008697.01.T01:intron 40.0%
!! CAGTACTCTAAGGCTTTGTT+TGG + Chr2:36713437-36713456 None:intergenic 40.0%
!! GCTTGATGGATTACCAGATA+AGG - Chr2:36718066-36718085 MsG0280008697.01.T01:intron 40.0%
!! TCATGAGATTTTGGCAAACC+TGG - Chr2:36716502-36716521 MsG0280008697.01.T01:intron 40.0%
!! TTATGAAATAGCGGATGCCT+GGG + Chr2:36718501-36718520 None:intergenic 40.0%
!! TTGGGTTAGCTCAGTTTGTA+GGG - Chr2:36713282-36713301 MsG0280008697.01.T01:CDS 40.0%
!! TTTATGAAATAGCGGATGCC+TGG + Chr2:36718502-36718521 None:intergenic 40.0%
!! TTTGGGTTAGCTCAGTTTGT+AGG - Chr2:36713281-36713300 MsG0280008697.01.T01:CDS 40.0%
!!! GCCATGCTTTGTTTTTCGAA+TGG - Chr2:36718110-36718129 MsG0280008697.01.T01:intron 40.0%
AACAGTACAGCAAGAGGTTG+AGG + Chr2:36712664-36712683 None:intergenic 45.0%
AAGCCACCAACTATCACTCA+TGG + Chr2:36716767-36716786 None:intergenic 45.0%
AAGCTCCCACTGTTCACAAA+TGG + Chr2:36718044-36718063 None:intergenic 45.0%
AATGAAATCATGCCTCCTGC+TGG + Chr2:36716405-36716424 None:intergenic 45.0%
ACACGACACGAAGTCTTACT+TGG + Chr2:36714572-36714591 None:intergenic 45.0%
AGAAAACTCGGCGTCATCTT+TGG + Chr2:36715491-36715510 None:intergenic 45.0%
AGTCGTTTGAGGAGGAGAAT+TGG - Chr2:36714228-36714247 MsG0280008697.01.T01:intron 45.0%
AGTCTCACAAGTGACAAGAG+TGG - Chr2:36716575-36716594 MsG0280008697.01.T01:intron 45.0%
AGTTGGTTGCATTAACTGCC+GGG - Chr2:36717610-36717629 MsG0280008697.01.T01:five_prime_UTR 45.0%
AGTTGTAGAGTCGTTTGAGG+AGG - Chr2:36714220-36714239 MsG0280008697.01.T01:intron 45.0%
ATATACATGGTCACCCTCCT+CGG + Chr2:36716065-36716084 None:intergenic 45.0%
ATCAGTGACACGAAGAGATG+TGG + Chr2:36718635-36718654 None:intergenic 45.0%
ATGGAACCATCAAGTCGTCT+AGG - Chr2:36716468-36716487 MsG0280008697.01.T01:intron 45.0%
ATGTAAGGACCCTCAGTAAG+TGG - Chr2:36717957-36717976 MsG0280008697.01.T01:intron 45.0%
ATGTGGCAATGGTCACACTT+AGG - Chr2:36716114-36716133 MsG0280008697.01.T01:intron 45.0%
ATTGATGAGGATGGAAGGGT+TGG - Chr2:36713837-36713856 MsG0280008697.01.T01:intron 45.0%
ATTGCCATTCCTTAGGCAGT+TGG + Chr2:36717993-36718012 None:intergenic 45.0%
ATTTGTGAACAGTGGGAGCT+TGG - Chr2:36718043-36718062 MsG0280008697.01.T01:intron 45.0%
CAAGAGAACCAGTTCTGCAA+GGG - Chr2:36715417-36715436 MsG0280008697.01.T01:intron 45.0%
CAATGTAACACAGACTGCAC+AGG + Chr2:36716037-36716056 None:intergenic 45.0%
CACGACACGAAGTCTTACTT+GGG + Chr2:36714571-36714590 None:intergenic 45.0%
CACTTTGATGTGGTTACAGG+AGG - Chr2:36718285-36718304 MsG0280008697.01.T01:intron 45.0%
CAGTTGGTTGCATTAACTGC+CGG - Chr2:36717609-36717628 MsG0280008697.01.T01:five_prime_UTR 45.0%
CATATTATATGCAGGAGCCG+TGG - Chr2:36713333-36713352 MsG0280008697.01.T01:CDS 45.0%
CGCTGTTCATATTCCTTGGT+AGG - Chr2:36716375-36716394 MsG0280008697.01.T01:intron 45.0%
CGCTTTCATTGCCATTCCTT+AGG + Chr2:36718000-36718019 None:intergenic 45.0%
CTCCATGGGTAAACCATACA+AGG - Chr2:36716329-36716348 MsG0280008697.01.T01:intron 45.0%
CTGTGCAGTCTGTGTTACAT+TGG - Chr2:36716035-36716054 MsG0280008697.01.T01:intron 45.0%
CTTACCAACTGCCTAAGGAA+TGG - Chr2:36717986-36718005 MsG0280008697.01.T01:intron 45.0%
CTTATCCAAACAGTCAGCCA+TGG - Chr2:36716449-36716468 MsG0280008697.01.T01:intron 45.0%
GAAAGCCTCAGCGTGTATAA+AGG - Chr2:36714481-36714500 MsG0280008697.01.T01:intron 45.0%
GAGGAAGGGAAAGGAAAGAA+TGG - Chr2:36713252-36713271 MsG0280008697.01.T01:CDS 45.0%
GCAGAGGAACTATCATCAAC+TGG + Chr2:36714350-36714369 None:intergenic 45.0%
GCAGTTAATGCAACCAACTG+GGG + Chr2:36717609-36717628 None:intergenic 45.0%
GCTAAATACCCTTGCAGAAC+TGG + Chr2:36715428-36715447 None:intergenic 45.0%
GGAGGAGGGAATTACCAAAT+TGG - Chr2:36717407-36717426 MsG0280008697.01.T01:CDS 45.0%
GGCAGTTAATGCAACCAACT+GGG + Chr2:36717610-36717629 None:intergenic 45.0%
GGTCACAGAATCGATGTTCT+TGG - Chr2:36716689-36716708 MsG0280008697.01.T01:CDS 45.0%
GGTGGAACTAGAAGGAATGA+TGG + Chr2:36712631-36712650 None:intergenic 45.0%
GTAGGTTGTCACAAATGTGG+AGG - Chr2:36717750-36717769 MsG0280008697.01.T01:intron 45.0%
GTCGTTTGAGGAGGAGAATT+GGG - Chr2:36714229-36714248 MsG0280008697.01.T01:intron 45.0%
TATACAAGAGGAGTGAGGTG+GGG + Chr2:36712573-36712592 None:intergenic 45.0%
TCGCACCATTTGTGAACAGT+GGG - Chr2:36718036-36718055 MsG0280008697.01.T01:intron 45.0%
TGACCATGAGTGATAGTTGG+TGG - Chr2:36716761-36716780 MsG0280008697.01.T01:CDS 45.0%
TGCTCTGGCATGTTCTTTGT+AGG - Chr2:36715394-36715413 MsG0280008697.01.T01:intron 45.0%
TGCTTCCTCTCAAGCAATTG+AGG - Chr2:36718667-36718686 MsG0280008697.01.T01:five_prime_UTR 45.0%
TGGAACCATCAAGTCGTCTA+GGG - Chr2:36716469-36716488 MsG0280008697.01.T01:intron 45.0%
TGGCACTTTGATGTGGTTAC+AGG - Chr2:36718282-36718301 MsG0280008697.01.T01:intron 45.0%
TGTGACCATTGCCACATGAT+CGG + Chr2:36716111-36716130 None:intergenic 45.0%
TTATACACGCTGAGGCTTTC+AGG + Chr2:36714481-36714500 None:intergenic 45.0%
TTCAGCTTACCAACTGCCTA+AGG - Chr2:36717981-36718000 MsG0280008697.01.T01:intron 45.0%
TTCGCACCATTTGTGAACAG+TGG - Chr2:36718035-36718054 MsG0280008697.01.T01:intron 45.0%
TTGGTAAAAACCAGACGGTG+TGG - Chr2:36716822-36716841 MsG0280008697.01.T01:CDS 45.0%
TTTGATGTGGTTACAGGAGG+TGG - Chr2:36718288-36718307 MsG0280008697.01.T01:intron 45.0%
TTTGTGAACAGTGGGAGCTT+GGG - Chr2:36718044-36718063 MsG0280008697.01.T01:intron 45.0%
! ACATCTCTTCGTGTCACTGA+TGG - Chr2:36718634-36718653 MsG0280008697.01.T01:five_prime_UTR 45.0%
! AGAGGGTGAGGACATTGATT+TGG - Chr2:36717464-36717483 MsG0280008697.01.T01:five_prime_UTR 45.0%
! AGAGGTTGAGGTTGTGGTTT+TGG + Chr2:36712652-36712671 None:intergenic 45.0%
! AGTATCTGAGGTTCGAACCA+CGG + Chr2:36713353-36713372 None:intergenic 45.0%
! ATTTTCTCTGCATCTCGTCC+AGG + Chr2:36718435-36718454 None:intergenic 45.0%
! GTTTTGTGAAGCATGAGGTC+AGG - Chr2:36712864-36712883 MsG0280008697.01.T01:CDS 45.0%
! TAGACGACTTGATGGTTCCA+TGG + Chr2:36716469-36716488 None:intergenic 45.0%
! TGAAGAGCTTTTACCCCAGT+TGG - Chr2:36717593-36717612 MsG0280008697.01.T01:five_prime_UTR 45.0%
! TGATGGATGTGTGTACTGTC+TGG + Chr2:36712614-36712633 None:intergenic 45.0%
! TGTGTTACATTGGTTGTCCG+AGG - Chr2:36716045-36716064 MsG0280008697.01.T01:intron 45.0%
! TTACATTGGTTGTCCGAGGA+GGG - Chr2:36716049-36716068 MsG0280008697.01.T01:intron 45.0%
! TTTTCTCTGCATCTCGTCCA+GGG + Chr2:36718434-36718453 None:intergenic 45.0%
!! AAGGCTTTGTTTGGGAGGAT+AGG + Chr2:36713428-36713447 None:intergenic 45.0%
!! ACTCTAAGGCTTTGTTTGGG+AGG + Chr2:36713433-36713452 None:intergenic 45.0%
!! AGGCTTTGTTTGGGAGGATA+GGG + Chr2:36713427-36713446 None:intergenic 45.0%
!! GATGTGGAAGTCTAGTTCTG+AGG + Chr2:36718619-36718638 None:intergenic 45.0%
!! TATGAAATAGCGGATGCCTG+GGG + Chr2:36718500-36718519 None:intergenic 45.0%
!! TCTGAGGCTGTCTTTTCTCT+AGG - Chr2:36713686-36713705 MsG0280008697.01.T01:CDS 45.0%
!! TTGAAAGCGTTGAGGAACAC+CGG - Chr2:36713939-36713958 MsG0280008697.01.T01:intron 45.0%
!!! GTGGTTTTGGTGGAACTAGA+AGG + Chr2:36712639-36712658 None:intergenic 45.0%
!! TACATTAAAAAAAAAAAAAA+AGG + Chr2:36716982-36717001 None:intergenic 5.0%
!!! AAAAATATTTTAATTAATCT+TGG - Chr2:36717032-36717051 MsG0280008697.01.T01:CDS 5.0%
!!! AAGATTAATTAAAATATTTT+TGG + Chr2:36717033-36717052 None:intergenic 5.0%
ACAGCAAGAGGTTGAGGTTG+TGG + Chr2:36712658-36712677 None:intergenic 50.0%
ACTCTTCTGCGGCAGAATTC+TGG - Chr2:36714539-36714558 MsG0280008697.01.T01:intron 50.0%
ACTGAGGTTACTCAGCTGCT+GGG + Chr2:36717813-36717832 None:intergenic 50.0%
AGAAGCGGGAGAACATTGGA+GGG - Chr2:36714428-36714447 MsG0280008697.01.T01:intron 50.0%
AGGTCAGGAGGGAACATCTT+AGG - Chr2:36712879-36712898 MsG0280008697.01.T01:CDS 50.0%
AGTGTGGGAAGATCACGTAG+CGG - Chr2:36714305-36714324 MsG0280008697.01.T01:intron 50.0%
CATAATTGCTCAACAGGCCG+AGG - Chr2:36718348-36718367 MsG0280008697.01.T01:intron 50.0%
CCAGAGAGAACGGTCTGATT+CGG - Chr2:36716668-36716687 MsG0280008697.01.T01:intron 50.0%
CCCGCTTCTACCAATCATCA+CGG + Chr2:36714417-36714436 None:intergenic 50.0%
CCCGTGATGATTGGTAGAAG+CGG - Chr2:36714413-36714432 MsG0280008697.01.T01:intron 50.0%
CCGCTTCTACCAATCATCAC+GGG + Chr2:36714416-36714435 None:intergenic 50.0%
CCGTGATGATTGGTAGAAGC+GGG - Chr2:36714414-36714433 MsG0280008697.01.T01:intron 50.0%
CGGCAGTTAATGCAACCAAC+TGG + Chr2:36717611-36717630 None:intergenic 50.0%
CTAGTCCTAGTGAACCATGC+AGG - Chr2:36715509-36715528 MsG0280008697.01.T01:intron 50.0%
CTCGGCCTGTTGAGCAATTA+TGG + Chr2:36718350-36718369 None:intergenic 50.0%
CTTATGCTGCGAGTGAGCTT+TGG - Chr2:36714804-36714823 MsG0280008697.01.T01:intron 50.0%
GAGTGGAGCAGTGACATAGT+TGG - Chr2:36716803-36716822 MsG0280008697.01.T01:CDS 50.0%
GATGTGTGTACTGTCTGGTG+TGG + Chr2:36712609-36712628 None:intergenic 50.0%
GCAAGAGAACCAGTTCTGCA+AGG - Chr2:36715416-36715435 MsG0280008697.01.T01:intron 50.0%
GTAAAAACCAGACGGTGTGG+AGG - Chr2:36716825-36716844 MsG0280008697.01.T01:CDS 50.0%
TAGAAGCGGGAGAACATTGG+AGG - Chr2:36714427-36714446 MsG0280008697.01.T01:intron 50.0%
TATGGTCGATCCCGAAAGCA+TGG + Chr2:36716150-36716169 None:intergenic 50.0%
TCAGCAAGAAAAGGAGGCAG+CGG + Chr2:36714071-36714090 None:intergenic 50.0%
TGATCGGCCACACTATCGAT+AGG + Chr2:36716095-36716114 None:intergenic 50.0%
TGGTAGAAGCGGGAGAACAT+TGG - Chr2:36714424-36714443 MsG0280008697.01.T01:intron 50.0%
TGGTTCCATGGCTGACTGTT+TGG + Chr2:36716457-36716476 None:intergenic 50.0%
TGTGAAGCATGAGGTCAGGA+GGG - Chr2:36712868-36712887 MsG0280008697.01.T01:CDS 50.0%
TTCACCACTTCGAAAAGCCG+AGG - Chr2:36716170-36716189 MsG0280008697.01.T01:intron 50.0%
TTGTGAAGCATGAGGTCAGG+AGG - Chr2:36712867-36712886 MsG0280008697.01.T01:CDS 50.0%
! CACTGATTAGCAAGACCCTG+GGG + Chr2:36714866-36714885 None:intergenic 50.0%
! CTGATTTGATAAGCCTGCGG+CGG - Chr2:36717529-36717548 MsG0280008697.01.T01:five_prime_UTR 50.0%
! GGCCTTGTATGGTTTACCCA+TGG + Chr2:36716334-36716353 None:intergenic 50.0%
! GGGTTGGCATATGCAAGGAA+AGG - Chr2:36713853-36713872 MsG0280008697.01.T01:intron 50.0%
! GTTACATTGGTTGTCCGAGG+AGG - Chr2:36716048-36716067 MsG0280008697.01.T01:intron 50.0%
! TGGAAGGGTTGGCATATGCA+AGG - Chr2:36713848-36713867 MsG0280008697.01.T01:intron 50.0%
!! AAGTGCCGAAAGTGTGATGG+TGG - Chr2:36715988-36716007 MsG0280008697.01.T01:intron 50.0%
!! CAGAAGTGCCGAAAGTGTGA+TGG - Chr2:36715985-36716004 MsG0280008697.01.T01:intron 50.0%
!! GCACTGATTAGCAAGACCCT+GGG + Chr2:36714867-36714886 None:intergenic 50.0%
!! TGCACTGATTAGCAAGACCC+TGG + Chr2:36714868-36714887 None:intergenic 50.0%
!!! GGTTGAGGTTGTGGTTTTGG+TGG + Chr2:36712649-36712668 None:intergenic 50.0%
ACAAAGCATGGCGCGTTGTG+AGG + Chr2:36718102-36718121 None:intergenic 55.0%
ACATATACTCCCCCTCCCCA+GGG - Chr2:36714848-36714867 MsG0280008697.01.T01:intron 55.0%
ACTTCGAAAAGCCGAGGCAG+AGG - Chr2:36716176-36716195 MsG0280008697.01.T01:intron 55.0%
AGATCAGTGCCTGCGACTGA+TGG + Chr2:36717790-36717809 None:intergenic 55.0%
AGGTAGCTTCCTCTCAGACG+CGG + Chr2:36716017-36716036 None:intergenic 55.0%
AGGTGGTAAATCAGGCGGTG+GGG + Chr2:36714045-36714064 None:intergenic 55.0%
AGTGTGGCACAATGAGCTCC+CGG + Chr2:36715535-36715554 None:intergenic 55.0%
ATCAGATCCTCCACACCGTC+TGG + Chr2:36716835-36716854 None:intergenic 55.0%
ATTAGCAAGACCCTGGGGAG+GGG + Chr2:36714861-36714880 None:intergenic 55.0%
CAAAGCATGGCGCGTTGTGA+GGG + Chr2:36718101-36718120 None:intergenic 55.0%
CACTGAGGTTACTCAGCTGC+TGG + Chr2:36717814-36717833 None:intergenic 55.0%
CCGAATCAGACCGTTCTCTC+TGG + Chr2:36716671-36716690 None:intergenic 55.0%
CGATAGTGTGGCCGATCATG+TGG - Chr2:36716097-36716116 MsG0280008697.01.T01:intron 55.0%
CTCGGTGAACTGCCTAAGTG+TGG + Chr2:36713967-36713986 None:intergenic 55.0%
GAACTGCCTAAGTGTGGCAC+CGG + Chr2:36713961-36713980 None:intergenic 55.0%
GAGGTGGTAAATCAGGCGGT+GGG + Chr2:36714046-36714065 None:intergenic 55.0%
GATTAGCAAGACCCTGGGGA+GGG + Chr2:36714862-36714881 None:intergenic 55.0%
GCAGCGGAGATACTCTTCTG+CGG - Chr2:36714528-36714547 MsG0280008697.01.T01:intron 55.0%
GGCGTCATCTTTGGTGAACG+TGG + Chr2:36715482-36715501 None:intergenic 55.0%
GGCTGCCACCATCACACTTT+CGG + Chr2:36715996-36716015 None:intergenic 55.0%
GTGTGGGAAGATCACGTAGC+GGG - Chr2:36714306-36714325 MsG0280008697.01.T01:intron 55.0%
GTTGGCCCTAGACGACTTGA+TGG + Chr2:36716477-36716496 None:intergenic 55.0%
GTTTGGGAGGATAGGGCTTC+TGG + Chr2:36713420-36713439 None:intergenic 55.0%
TCCTAGTGAACCATGCAGGC+CGG - Chr2:36715513-36715532 MsG0280008697.01.T01:intron 55.0%
TGATTAGCAAGACCCTGGGG+AGG + Chr2:36714863-36714882 None:intergenic 55.0%
TGTGGCCGATCATGTGGCAA+TGG - Chr2:36716103-36716122 MsG0280008697.01.T01:intron 55.0%
! ATCACGTAGCGGGAAGCAAC+CGG - Chr2:36714316-36714335 MsG0280008697.01.T01:intron 55.0%
! TCTGCCTCGGCTTTTCGAAG+TGG + Chr2:36716177-36716196 None:intergenic 55.0%
!! ACCTGTTGACTCCTCTGCCT+CGG + Chr2:36716190-36716209 None:intergenic 55.0%
AAATCAGGCGGTGGGGAAGG+TGG + Chr2:36714038-36714057 None:intergenic 60.0%
AATCAGGCGGTGGGGAAGGT+GGG + Chr2:36714037-36714056 None:intergenic 60.0%
AGCGGCGGAGGTGGTAAATC+AGG + Chr2:36714053-36714072 None:intergenic 60.0%
CACATATACTCCCCCTCCCC+AGG - Chr2:36714847-36714866 MsG0280008697.01.T01:intron 60.0%
CAGTGGGAGCTTGGGCTTGA+TGG - Chr2:36718052-36718071 MsG0280008697.01.T01:intron 60.0%
CCTAGTGAACCATGCAGGCC+GGG - Chr2:36715514-36715533 MsG0280008697.01.T01:intron 60.0%
GCAAGAAAAGGAGGCAGCGG+CGG + Chr2:36714068-36714087 None:intergenic 60.0%
GCATGGATGCCATCAGTCGC+AGG - Chr2:36717778-36717797 MsG0280008697.01.T01:intron 60.0%
GCGACTGCCGCTCAACTTTC+TGG - Chr2:36713708-36713727 MsG0280008697.01.T01:CDS 60.0%
GGAGGTGGTAAATCAGGCGG+TGG + Chr2:36714047-36714066 None:intergenic 60.0%
GGCGGAGGTGGTAAATCAGG+CGG + Chr2:36714050-36714069 None:intergenic 60.0%
GGTAAATCAGGCGGTGGGGA+AGG + Chr2:36714041-36714060 None:intergenic 60.0%
TTAGCAAGACCCTGGGGAGG+GGG + Chr2:36714860-36714879 None:intergenic 60.0%
TTTCACTGATGCACCGCCGC+AGG + Chr2:36717545-36717564 None:intergenic 60.0%
! CTGGGGAGGGGGAGTATATG+TGG + Chr2:36714849-36714868 None:intergenic 60.0%
!! GGAACACCGGTGCCACACTT+AGG - Chr2:36713952-36713971 MsG0280008697.01.T01:intron 60.0%
AGAAAAGGAGGCAGCGGCGG+AGG + Chr2:36714065-36714084 None:intergenic 65.0%
ATCAGGCGGTGGGGAAGGTG+GGG + Chr2:36714036-36714055 None:intergenic 65.0%
CAATGAGCTCCCGGCCTGCA+TGG + Chr2:36715526-36715545 None:intergenic 65.0%
CCCGGCCTGCATGGTTCACT+AGG + Chr2:36715517-36715536 None:intergenic 65.0%
GCCGAGGCAGAGGAGTCAAC+AGG - Chr2:36716186-36716205 MsG0280008697.01.T01:intron 65.0%
GGCTTCAGGCAGGCCAGTAG+AGG + Chr2:36714015-36714034 None:intergenic 65.0%
TCCTTGGTAGGCGCTCCAGC+AGG - Chr2:36716387-36716406 MsG0280008697.01.T01:intron 65.0%
TTGGTAGGCGCTCCAGCAGG+AGG - Chr2:36716390-36716409 MsG0280008697.01.T01:intron 65.0%
! TCCTGCTGGAGCGCCTACCA+AGG + Chr2:36716391-36716410 None:intergenic 65.0%
AAAGGAGGCAGCGGCGGAGG+TGG + Chr2:36714062-36714081 None:intergenic 70.0%
GGGAAGGTGGGGCTTCAGGC+AGG + Chr2:36714025-36714044 None:intergenic 70.0%
GGTGGGGAAGGTGGGGCTTC+AGG + Chr2:36714029-36714048 None:intergenic 70.0%
TGGTGGCAGCCGCGTCTGAG+AGG - Chr2:36716005-36716024 MsG0280008697.01.T01:intron 70.0%
!! GCGGAGGTGCTCGAAGTCCC+TGG - Chr2:36718414-36718433 MsG0280008697.01.T01:intron 70.0%
! CGCGTGCGTGCGTGCGTGCG+TGG + Chr2:36712728-36712747 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 36712533 36718715 36712533 ID=MsG0280008697.01;Name=MsG0280008697.01
Chr2 mRNA 36712533 36718715 36712533 ID=MsG0280008697.01.T01;Parent=MsG0280008697.01;Name=MsG0280008697.01.T01;_AED=0.42;_eAED=0.42;_QI=563|0.83|0.57|1|0.5|0.42|7|0|598
Chr2 exon 36712533 36712713 36712533 ID=MsG0280008697.01.T01:exon:4607;Parent=MsG0280008697.01.T01
Chr2 exon 36712829 36712944 36712829 ID=MsG0280008697.01.T01:exon:4606;Parent=MsG0280008697.01.T01
Chr2 exon 36713161 36713494 36713161 ID=MsG0280008697.01.T01:exon:4605;Parent=MsG0280008697.01.T01
Chr2 exon 36713617 36713840 36713617 ID=MsG0280008697.01.T01:exon:4604;Parent=MsG0280008697.01.T01
Chr2 exon 36715648 36715832 36715648 ID=MsG0280008697.01.T01:exon:4603;Parent=MsG0280008697.01.T01
Chr2 exon 36716676 36717745 36716676 ID=MsG0280008697.01.T01:exon:4602;Parent=MsG0280008697.01.T01
Chr2 exon 36718466 36718715 36718466 ID=MsG0280008697.01.T01:exon:4601;Parent=MsG0280008697.01.T01
Chr2 five_prime_UTR 36718466 36718715 36718466 ID=MsG0280008697.01.T01:five_prime_utr;Parent=MsG0280008697.01.T01
Chr2 five_prime_UTR 36717433 36717745 36717433 ID=MsG0280008697.01.T01:five_prime_utr;Parent=MsG0280008697.01.T01
Chr2 CDS 36716676 36717432 36716676 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Chr2 CDS 36715648 36715832 36715648 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Chr2 CDS 36713617 36713840 36713617 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Chr2 CDS 36713161 36713494 36713161 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Chr2 CDS 36712829 36712944 36712829 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Chr2 CDS 36712533 36712713 36712533 ID=MsG0280008697.01.T01:cds;Parent=MsG0280008697.01.T01
Gene Sequence

>MsG0280008697.01.T01

ATGGGCTGTGTGTTATCAAGTATTGATGAGGATGGAAGGGTTGGCATATGCAAGGAAAGGAAGAAGGTAATCAAACAGTTAGTTTGTAATAGAGAGGAGTTTTCTGATGCCTTATTAGCTTATTTGAAAGCGTTGAGGAACACCGGTGCCACACTTAGGCAGTTCACCGAGTCCGATACATTAGAATTAGACTTTGCCTCTACTGGCCTGCCTGAAGCCCCACCTTCCCCACCGCCTGATTTACCACCTCCGCCGCTGCCTCCTTTTCTTGCTGAAAAGAGTTTTGTTCACGTTGGCGAAAATGAAATACTAGAGAATGATGGCACTGATAACTTTGTTCATCTGCTGCAAATTGATCAAGGTTTGAGCTCATCGTTGCTATTTCAACCTGTGGATAAAGTAGAAGTTGTAGAGTCGTTTGAGGAGGAGAATTGGGAAGAAACCAAAACTGAATTTGAGGATGAAGTCCAAGATTCAGAAGCTGATGTAAGTGTGGGAAGATCACGTAGCGGGAAGCAACCGGTCAAAGAACCAGTTGATGATAGTTCCTCTGCTATTACTTTGTTTAGAAAAGAAACTCATGTTACTAAAGCTATTCCCGTGATGATTGGTAGAAGCGGGAGAACATTGGAGGGTATAGTTAAAGAGTTAGACGATCATTTCCTGAAAGCCTCAGCGTGTATAAAGGAAATCGCTGTTCTTATTGATATCAGCAGCGGAGATACTCTTCTGCGGCAGAATTCTGGTCGTCACCCAAGCAAGAGAACCAGTTCTGCAAGGGTATTTAGCGTACTATCATGGAGTAGGCATGCTAAGTCATCCACGTTCACCAAAGATGACGCCGAGTTTTCTAGTCCTAGTGAACCATGCAGGCCGGGAGCTCATTGTGCCACACTTAAAAAATTATATGCGGCAGAGAAGAAACTTTACAAGGCAGTAAAGGAGGAGGGAATTACCAAATTGGAGTTTGAGAGGAAGTCATCGTCATTGAAAAAGCAAGAGGGTGAGGACATTGATTTGGTTAAAATTGACAAAATTCGATCAAATGTTGAGAAATTGGAGTCTGATTTGATAAGCCTGCGGCGGTGCATCAGTGAAACAACTTCATCCATTTTGGAACTTATAGATGAAGAGCTTTTACCCCAGTTGGTTGCATTAACTGCCGGGTTGTCACAAATGTGGAGGATAATGCATGGATGCCATCAGTCGCAGGCACTGATCTCCCAGCAGCTGAGTAACCTCAGTGATAACCACAATACAATTCTGAATTCTGAATCTGAATATCATCATCAAGCTACAATTCAGTTTGAGAGTGAGGCTTCTTATTGGTATAATAGCTTCTGTAAACTTGTAAAATCGCAACAAGAGTATGTAAGGACCCTCAGTAAGTGGATTCAGCTTACCAACTGCCTAAGGAATGGCAATGAAAGCGGCAACCACTCTTCTATTCGCACCATTTGTGAACAGTGGGAGCTTGGGCTTGATGGATTACCAGATAAGGAGGTGGCCGATGCGATAAAAAACCTTCTGTTATCCATACGTTCCATAATTGCTCAACAGGCCGAGGAAGACAACATTCTAAAAAAGTTGGAAAAACTTGAAAGAAAGTTGCGGAGAAGCCTTAAAGAAGCAAGTGGAAAGTGTGAAAGCAGATTATTGGATTCTGTTCAGTATAGTAGAACCATGACTCTTGATAACCTCAGAACTAGACTTCCACATCTCTTCGTGTCACTGATGGAATTTTCAAGTGCTTCCTCTCAAGCAATTGAGGCTATTCATTCTCAGTCAAGCCAATAG
Protein sequence

>MsG0280008697.01.T01

MGCVLSSIDEDGRVGICKERKKVIKQLVCNREEFSDALLAYLKALRNTGATLRQFTESDTLELDFASTGLPEAPPSPPPDLPPPPLPPFLAEKSFVHVGENEILENDGTDNFVHLLQIDQGLSSSLLFQPVDKVEVVESFEEENWEETKTEFEDEVQDSEADVSVGRSRSGKQPVKEPVDDSSSAITLFRKETHVTKAIPVMIGRSGRTLEGIVKELDDHFLKASACIKEIAVLIDISSGDTLLRQNSGRHPSKRTSSARVFSVLSWSRHAKSSTFTKDDAEFSSPSEPCRPGAHCATLKKLYAAEKKLYKAVKEEGITKLEFERKSSSLKKQEGEDIDLVKIDKIRSNVEKLESDLISLRRCISETTSSILELIDEELLPQLVALTAGLSQMWRIMHGCHQSQALISQQLSNLSDNHNTILNSESEYHHQATIQFESEASYWYNSFCKLVKSQQEYVRTLSKWIQLTNCLRNGNESGNHSSIRTICEQWELGLDGLPDKEVADAIKNLLLSIRSIIAQQAEEDNILKKLEKLERKLRRSLKEASGKCESRLLDSVQYSRTMTLDNLRTRLPHLFVSLMEFSSASSQAIEAIHSQSSQ*