Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041800.01.T01 | XP_003626601.1 | 98.315 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041800.01.T01 | Q9MAM3 | 73.194 | 526 | 136 | 4 | 4 | 528 | 5 | 526 | 0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041800.01.T01 | Q2HTC9 | 98.315 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004458.01 | MsG0780041800.01 | 0.801028 | 1.092037e-48 | 5.161930e-46 |
| MsG0180004852.01 | MsG0780041800.01 | 0.818743 | 1.671734e-52 | 1.261895e-49 |
| MsG0180005226.01 | MsG0780041800.01 | 0.800560 | 1.361050e-48 | 6.356973e-46 |
| MsG0280006451.01 | MsG0780041800.01 | 0.810464 | 1.137665e-50 | 6.862426e-48 |
| MsG0780040437.01 | MsG0780041800.01 | 0.820432 | 6.882017e-53 | 5.444602e-50 |
| MsG0780041640.01 | MsG0780041800.01 | 0.812133 | 4.942006e-51 | 3.116436e-48 |
| MsG0780041800.01 | MsG0880043148.01 | 0.808037 | 3.770627e-50 | 2.133242e-47 |
| MsG0780041800.01 | MsG0880045374.01 | 0.812398 | 4.326572e-51 | 2.748086e-48 |
| MsG0780041800.01 | MsG0880045772.01 | 0.801500 | 8.746394e-49 | 4.183536e-46 |
| MsG0380014711.01 | MsG0780041800.01 | 0.812469 | 4.173103e-51 | 2.655696e-48 |
| MsG0680030879.01 | MsG0780041800.01 | 0.811492 | 6.814217e-51 | 4.224187e-48 |
| MsG0480018888.01 | MsG0780041800.01 | 0.818612 | 1.790163e-52 | 1.346363e-49 |
| MsG0480022581.01 | MsG0780041800.01 | 0.818167 | 2.257400e-52 | 1.677123e-49 |
| MsG0480023371.01 | MsG0780041800.01 | 0.804313 | 2.293525e-49 | 1.178751e-46 |
| MsG0380015697.01 | MsG0780041800.01 | 0.800216 | 1.599178e-48 | 7.404390e-46 |
| MsG0380017647.01 | MsG0780041800.01 | 0.804429 | 2.169507e-49 | 1.118303e-46 |
| MsG0380017727.01 | MsG0780041800.01 | 0.812354 | 4.423557e-51 | 2.806315e-48 |
| MsG0380017775.01 | MsG0780041800.01 | 0.837933 | 3.879421e-57 | 5.116791e-54 |
| MsG0380017870.01 | MsG0780041800.01 | 0.827289 | 1.698160e-54 | 1.632402e-51 |
| MsG0280007902.01 | MsG0780041800.01 | 0.806897 | 6.579618e-50 | 3.613548e-47 |
| MsG0280008588.01 | MsG0780041800.01 | 0.803009 | 4.277546e-49 | 2.125905e-46 |
| MsG0280010522.01 | MsG0780041800.01 | 0.832031 | 1.192112e-55 | 1.316566e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180001685.01 | MsG0780041800.01 | PPI |
| MsG0180004283.01 | MsG0780041800.01 | PPI |
| MsG0180004283.01 | MsG0780041800.01 | PPI |
| MsG0780041800.01 | MsG0180004168.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041800.01.T01 | MTR_7g118170 | 98.315 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1090 |
| MsG0780041800.01.T01 | MTR_1g076430 | 65.000 | 500 | 166 | 5 | 30 | 529 | 17 | 507 | 0.0 | 673 |
| MsG0780041800.01.T01 | MTR_1g041085 | 65.400 | 500 | 164 | 5 | 30 | 529 | 23 | 513 | 0.0 | 665 |
| MsG0780041800.01.T01 | MTR_2g054940 | 65.531 | 499 | 163 | 4 | 31 | 529 | 17 | 506 | 0.0 | 664 |
| MsG0780041800.01.T01 | MTR_4g113280 | 63.126 | 499 | 164 | 4 | 31 | 529 | 6 | 484 | 0.0 | 639 |
| MsG0780041800.01.T01 | MTR_4g070270 | 60.835 | 503 | 185 | 5 | 27 | 528 | 11 | 502 | 0.0 | 632 |
| MsG0780041800.01.T01 | MTR_7g081695 | 63.052 | 498 | 157 | 7 | 31 | 525 | 17 | 490 | 0.0 | 620 |
| MsG0780041800.01.T01 | MTR_3g105550 | 55.664 | 512 | 210 | 7 | 27 | 528 | 32 | 536 | 0.0 | 598 |
| MsG0780041800.01.T01 | MTR_1g110930 | 58.000 | 500 | 194 | 7 | 33 | 529 | 5 | 491 | 0.0 | 592 |
| MsG0780041800.01.T01 | MTR_5g056510 | 56.886 | 501 | 198 | 6 | 33 | 529 | 5 | 491 | 0.0 | 575 |
| MsG0780041800.01.T01 | MTR_7g118160 | 62.092 | 459 | 128 | 4 | 70 | 526 | 3 | 417 | 0.0 | 570 |
| MsG0780041800.01.T01 | MTR_4g054630 | 54.409 | 465 | 206 | 4 | 67 | 530 | 9 | 468 | 0.0 | 522 |
| MsG0780041800.01.T01 | MTR_4g054415 | 57.920 | 423 | 174 | 3 | 109 | 530 | 8 | 427 | 0.0 | 520 |
| MsG0780041800.01.T01 | MTR_6g074880 | 56.744 | 430 | 177 | 4 | 100 | 528 | 47 | 468 | 8.23e-180 | 514 |
| MsG0780041800.01.T01 | MTR_2g013740 | 49.696 | 493 | 227 | 5 | 27 | 517 | 27 | 500 | 1.04e-166 | 482 |
| MsG0780041800.01.T01 | MTR_6g032965 | 58.056 | 391 | 154 | 4 | 146 | 531 | 2 | 387 | 1.36e-165 | 475 |
| MsG0780041800.01.T01 | MTR_2g007020 | 52.174 | 414 | 192 | 3 | 118 | 530 | 45 | 453 | 5.33e-157 | 456 |
| MsG0780041800.01.T01 | MTR_2g436480 | 48.718 | 429 | 208 | 5 | 105 | 528 | 30 | 451 | 1.56e-147 | 431 |
| MsG0780041800.01.T01 | MTR_1g102290 | 46.472 | 411 | 214 | 3 | 118 | 526 | 78 | 484 | 5.15e-132 | 393 |
| MsG0780041800.01.T01 | MTR_3g072980 | 45.694 | 418 | 218 | 4 | 114 | 528 | 74 | 485 | 3.13e-129 | 386 |
| MsG0780041800.01.T01 | MTR_3g072940 | 45.694 | 418 | 218 | 4 | 114 | 528 | 74 | 485 | 3.52e-129 | 385 |
| MsG0780041800.01.T01 | MTR_2g096210 | 42.257 | 452 | 234 | 6 | 105 | 534 | 4 | 450 | 5.55e-123 | 370 |
| MsG0780041800.01.T01 | MTR_4g062270 | 43.458 | 428 | 225 | 7 | 106 | 525 | 15 | 433 | 1.06e-122 | 368 |
| MsG0780041800.01.T01 | MTR_6g051440 | 45.854 | 410 | 213 | 4 | 121 | 527 | 80 | 483 | 2.24e-120 | 363 |
| MsG0780041800.01.T01 | MTR_4g062170 | 42.759 | 435 | 226 | 6 | 106 | 525 | 15 | 441 | 5.69e-120 | 362 |
| MsG0780041800.01.T01 | MTR_4g062190 | 41.972 | 436 | 229 | 5 | 106 | 525 | 15 | 442 | 3.24e-119 | 360 |
| MsG0780041800.01.T01 | MTR_1g115560 | 40.000 | 440 | 238 | 4 | 107 | 525 | 17 | 451 | 2.57e-118 | 358 |
| MsG0780041800.01.T01 | MTR_4g054260 | 54.023 | 261 | 99 | 4 | 271 | 530 | 87 | 327 | 5.10e-93 | 287 |
| MsG0780041800.01.T01 | MTR_4g053905 | 58.537 | 164 | 65 | 2 | 367 | 530 | 1 | 161 | 1.03e-63 | 205 |
| MsG0780041800.01.T01 | MTR_4g054265 | 40.708 | 113 | 67 | 0 | 107 | 219 | 6 | 118 | 1.22e-24 | 99.4 |
| MsG0780041800.01.T01 | MTR_4g078730 | 25.939 | 293 | 179 | 11 | 206 | 493 | 120 | 379 | 3.66e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041800.01.T01 | AT1G01120 | 73.194 | 526 | 136 | 4 | 4 | 528 | 5 | 526 | 0.0 | 801 |
| MsG0780041800.01.T01 | AT2G26640 | 64.940 | 502 | 161 | 5 | 31 | 529 | 15 | 504 | 0.0 | 674 |
| MsG0780041800.01.T01 | AT1G04220 | 64.158 | 505 | 167 | 6 | 31 | 529 | 20 | 516 | 0.0 | 665 |
| MsG0780041800.01.T01 | AT1G19440 | 60.636 | 503 | 186 | 5 | 27 | 528 | 23 | 514 | 0.0 | 630 |
| MsG0780041800.01.T01 | AT5G43760 | 63.636 | 495 | 169 | 4 | 39 | 529 | 34 | 521 | 0.0 | 628 |
| MsG0780041800.01.T01 | AT2G16280 | 60.594 | 505 | 177 | 9 | 30 | 528 | 22 | 510 | 0.0 | 617 |
| MsG0780041800.01.T01 | AT2G26250 | 54.563 | 526 | 203 | 7 | 27 | 526 | 33 | 548 | 0.0 | 585 |
| MsG0780041800.01.T01 | AT4G34510 | 58.182 | 495 | 187 | 7 | 37 | 528 | 8 | 485 | 0.0 | 582 |
| MsG0780041800.01.T01 | AT1G68530 | 56.225 | 498 | 206 | 5 | 33 | 529 | 6 | 492 | 0.0 | 580 |
| MsG0780041800.01.T01 | AT2G46720 | 62.529 | 427 | 159 | 1 | 102 | 528 | 40 | 465 | 0.0 | 577 |
| MsG0780041800.01.T01 | AT1G25450 | 56.137 | 497 | 208 | 5 | 33 | 529 | 1 | 487 | 0.0 | 570 |
| MsG0780041800.01.T01 | AT3G10280 | 61.358 | 427 | 157 | 2 | 102 | 528 | 40 | 458 | 0.0 | 558 |
| MsG0780041800.01.T01 | AT2G15090 | 52.083 | 480 | 218 | 3 | 59 | 530 | 6 | 481 | 0.0 | 524 |
| MsG0780041800.01.T01 | AT4G34520 | 57.045 | 440 | 171 | 4 | 104 | 528 | 54 | 490 | 0.0 | 519 |
| MsG0780041800.01.T01 | AT4G34250 | 56.818 | 440 | 175 | 5 | 104 | 532 | 56 | 491 | 0.0 | 519 |
| MsG0780041800.01.T01 | AT1G71160 | 50.350 | 429 | 206 | 3 | 106 | 533 | 31 | 453 | 4.89e-156 | 453 |
| MsG0780041800.01.T01 | AT5G49070 | 46.827 | 457 | 233 | 5 | 82 | 531 | 5 | 458 | 2.92e-147 | 431 |
| MsG0780041800.01.T01 | AT3G52160 | 46.229 | 411 | 187 | 3 | 108 | 518 | 74 | 450 | 1.08e-132 | 394 |
| MsG0780041800.01.T01 | AT3G52160 | 48.509 | 369 | 156 | 3 | 150 | 518 | 3 | 337 | 1.18e-123 | 366 |
| MsG0780041800.01.T01 | AT1G68530 | 48.118 | 372 | 177 | 5 | 33 | 399 | 6 | 366 | 4.93e-122 | 363 |
| MsG0780041800.01.T01 | AT2G28630 | 42.191 | 429 | 234 | 5 | 110 | 525 | 19 | 446 | 1.28e-120 | 363 |
| MsG0780041800.01.T01 | AT2G28630 | 42.191 | 429 | 234 | 5 | 110 | 525 | 19 | 446 | 1.28e-120 | 363 |
| MsG0780041800.01.T01 | AT1G07720 | 42.991 | 428 | 221 | 6 | 116 | 525 | 25 | 447 | 1.82e-116 | 353 |
| MsG0780041800.01.T01 | AT1G07720 | 42.991 | 428 | 221 | 6 | 116 | 525 | 68 | 490 | 3.63e-116 | 353 |
| MsG0780041800.01.T01 | AT5G04530 | 41.355 | 428 | 235 | 7 | 107 | 525 | 17 | 437 | 9.07e-116 | 350 |
| MsG0780041800.01.T01 | AT5G49070 | 42.071 | 309 | 173 | 3 | 82 | 384 | 5 | 313 | 1.43e-82 | 260 |
Find 133 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTGTCTCGTCTTCTTTC+TGG | 0.110532 | 7:+95300294 | None:intergenic |
| TCTTGTCATCAGCTCCTTTA+TGG | 0.143442 | 7:+95300333 | None:intergenic |
| TGTATGAACCAGCTTGTATT+TGG | 0.221689 | 7:+95300364 | None:intergenic |
| AAGACCACCGCGTAGGAATT+TGG | 0.226830 | 7:+95300515 | None:intergenic |
| TTCATTGGCTAGAGAATTAA+TGG | 0.254813 | 7:-95300261 | MsG0780041800.01.T01:CDS |
| AACATGAACTGTTCAGAAAA+TGG | 0.259600 | 7:+95300182 | None:intergenic |
| CAAAATCCGACGACGTTTAC+CGG | 0.274993 | 7:-95301260 | MsG0780041800.01.T01:CDS |
| GGTTCGATCAGAGGACTTAT+TGG | 0.284693 | 7:+95300391 | None:intergenic |
| CTTGTCATCAGCTCCTTTAT+GGG | 0.289862 | 7:+95300334 | None:intergenic |
| AATTTGAAATCTGGTATATA+AGG | 0.292144 | 7:+95300110 | None:intergenic |
| ATTTGCTTTCAAAAGATCTT+TGG | 0.295644 | 7:+95300538 | None:intergenic |
| GCAAAATCCACCAGGTAAAT+TGG | 0.298744 | 7:+95300980 | None:intergenic |
| GGGATTGGCGGGGCAACCCC+TGG | 0.302657 | 7:-95299812 | MsG0780041800.01.T01:CDS |
| GAAGCAGAAGCTGTAATGTT+TGG | 0.314657 | 7:-95300758 | MsG0780041800.01.T01:CDS |
| TCAAAAGCTAATTTGAAATC+TGG | 0.331655 | 7:+95300101 | None:intergenic |
| CGGGTCTGGCAGATTGCATT+CGG | 0.339753 | 7:-95299894 | MsG0780041800.01.T01:CDS |
| TTAACCCTCAATTGGTACTT+TGG | 0.358565 | 7:-95300479 | MsG0780041800.01.T01:CDS |
| GCCCATCGTCGGGGATTGGC+GGG | 0.367814 | 7:-95299823 | MsG0780041800.01.T01:CDS |
| GGACTTGACATTATTCCATT+TGG | 0.369284 | 7:+95300812 | None:intergenic |
| TGCGCGACTTGCCCATCGTC+GGG | 0.377345 | 7:-95299833 | MsG0780041800.01.T01:CDS |
| AGGAAGTTGCTGAAAGGTTC+AGG | 0.388486 | 7:-95300140 | MsG0780041800.01.T01:CDS |
| CGGATGACTCTGCATAGATT+TGG | 0.389216 | 7:-95299990 | MsG0780041800.01.T01:CDS |
| GCTTCTTTCATGCATAGATT+TGG | 0.389782 | 7:+95300788 | None:intergenic |
| AGAGAATTAATGGCTGTTGC+AGG | 0.392253 | 7:-95300251 | MsG0780041800.01.T01:CDS |
| GTTAAAATGTTAGAAGATAG+TGG | 0.394444 | 7:-95300911 | MsG0780041800.01.T01:CDS |
| AGGGAAAGTTGGTGTTTCAT+TGG | 0.396299 | 7:-95300276 | MsG0780041800.01.T01:CDS |
| ACACTTCAAGCAGTTCTCTA+TGG | 0.396346 | 7:-95299965 | MsG0780041800.01.T01:CDS |
| AAGCTATAATCTCGGAGGTA+TGG | 0.411775 | 7:-95300594 | MsG0780041800.01.T01:CDS |
| AAAACAAACATAACAACGTT+GGG | 0.411988 | 7:-95300218 | MsG0780041800.01.T01:CDS |
| TTAGAAGATAGTGGCGAATT+CGG | 0.414252 | 7:-95300902 | MsG0780041800.01.T01:CDS |
| ACTTGCCCATCGTCGGGGAT+TGG | 0.421630 | 7:-95299827 | MsG0780041800.01.T01:CDS |
| AAACTCAAGTACGTAAAGTT+AGG | 0.423051 | 7:-95301220 | MsG0780041800.01.T01:CDS |
| CATAACAACGTTGGGTCCAT+TGG | 0.424394 | 7:-95300210 | MsG0780041800.01.T01:CDS |
| CCAACTCAGTGAGTGGCATA+TGG | 0.428746 | 7:-95300021 | MsG0780041800.01.T01:CDS |
| TGGCAGATTGCATTCGGGTC+GGG | 0.430711 | 7:-95299888 | MsG0780041800.01.T01:CDS |
| GGAGGTATGGGTTGTAGTGC+TGG | 0.432856 | 7:-95300581 | MsG0780041800.01.T01:CDS |
| CGGAGAATTTAACCCTCAAT+TGG | 0.433036 | 7:-95300487 | MsG0780041800.01.T01:CDS |
| ATTGTTCTACTCTTCCTCTT+CGG | 0.433972 | 7:-95301028 | MsG0780041800.01.T01:CDS |
| CTGGCAGATTGCATTCGGGT+CGG | 0.444799 | 7:-95299889 | MsG0780041800.01.T01:CDS |
| TTGCAAAAGGAGATCGGGTC+TGG | 0.444918 | 7:-95299908 | MsG0780041800.01.T01:CDS |
| CAGTTCTCTATGGTATGAAC+TGG | 0.451448 | 7:-95299955 | MsG0780041800.01.T01:CDS |
| CATACAGTTAGAACCCATAA+AGG | 0.451862 | 7:-95300347 | MsG0780041800.01.T01:CDS |
| ACAAGAATGTCAATGTCTCT+TGG | 0.469200 | 7:+95300698 | None:intergenic |
| GTATAGCGGCGCCACCCATT+CGG | 0.470845 | 7:+95300420 | None:intergenic |
| TCTTTCATGCATAGATTTGG+TGG | 0.474801 | 7:+95300791 | None:intergenic |
| TGCCCATCGTCGGGGATTGG+CGG | 0.475863 | 7:-95299824 | MsG0780041800.01.T01:CDS |
| TTGCAGAAAGTGAAGGAGTT+GGG | 0.476301 | 7:+95300654 | None:intergenic |
| CATTTCCAAAGTACCAATTG+AGG | 0.478571 | 7:+95300474 | None:intergenic |
| GGATTGGCGGGGCAACCCCT+GGG | 0.483271 | 7:-95299811 | MsG0780041800.01.T01:CDS |
| AGCTATAATCTCGGAGGTAT+GGG | 0.488082 | 7:-95300593 | MsG0780041800.01.T01:CDS |
| GAACCAGCTTGTATTTGGAC+CGG | 0.488419 | 7:+95300369 | None:intergenic |
| AAGTACGTAAAGTTAGGTTA+TGG | 0.495016 | 7:-95301214 | MsG0780041800.01.T01:CDS |
| GAACATTTCTGTATTCATGC+TGG | 0.495485 | 7:-95300080 | MsG0780041800.01.T01:CDS |
| TTCACCGTCTGTAGAAAATC+CGG | 0.498288 | 7:+95301241 | None:intergenic |
| GCAGGGTTGCAAAAGGAGAT+CGG | 0.504101 | 7:-95299914 | MsG0780041800.01.T01:CDS |
| ATTTCCAAAGTACCAATTGA+GGG | 0.506557 | 7:+95300475 | None:intergenic |
| CTTATACTGAGGCAAAGGGC+AGG | 0.513960 | 7:-95299932 | MsG0780041800.01.T01:CDS |
| GGGTCTGGCAGATTGCATTC+GGG | 0.514216 | 7:-95299893 | MsG0780041800.01.T01:CDS |
| AATTGAACCGATGGCTGTAT+CGG | 0.514947 | 7:+95301048 | None:intergenic |
| GACGAAACTTCCTTGCCAAA+TGG | 0.515853 | 7:-95300827 | MsG0780041800.01.T01:CDS |
| GAAAACAAACATAACAACGT+TGG | 0.519196 | 7:-95300219 | MsG0780041800.01.T01:CDS |
| TGTTTGTTCTTAGCTTGTAG+TGG | 0.521220 | 7:+95300621 | None:intergenic |
| ACAGAAACAGGGACGCTGAC+GGG | 0.521485 | 7:+95299768 | None:intergenic |
| AACATTAAAAGCTATAATCT+CGG | 0.522267 | 7:-95300602 | MsG0780041800.01.T01:CDS |
| TACCAGAAAGAAGACGAGAC+AGG | 0.524700 | 7:-95300296 | MsG0780041800.01.T01:CDS |
| CAGGGTTGCAAAAGGAGATC+GGG | 0.528236 | 7:-95299913 | MsG0780041800.01.T01:CDS |
| GTGCGCGACTTGCCCATCGT+CGG | 0.529705 | 7:-95299834 | MsG0780041800.01.T01:CDS |
| GCCCCGCCAATCCCCGACGA+TGG | 0.531921 | 7:+95299821 | None:intergenic |
| GACGATGGGCAAGTCGCGCA+CGG | 0.536526 | 7:+95299836 | None:intergenic |
| CCCATCGTCGGGGATTGGCG+GGG | 0.538300 | 7:-95299822 | MsG0780041800.01.T01:CDS |
| CCCCGCCAATCCCCGACGAT+GGG | 0.539363 | 7:+95299822 | None:intergenic |
| AATCCACCAGGTAAATTGGT+GGG | 0.541242 | 7:+95300984 | None:intergenic |
| ATTGCAGAAAGTGAAGGAGT+TGG | 0.552174 | 7:+95300653 | None:intergenic |
| GAAGACGAGACAGGGAAAGT+TGG | 0.555142 | 7:-95300287 | MsG0780041800.01.T01:CDS |
| TCAGAAAATGGCAAAACCAA+TGG | 0.557047 | 7:+95300194 | None:intergenic |
| ACGATCCCCACCAATTTACC+TGG | 0.560276 | 7:-95300990 | MsG0780041800.01.T01:CDS |
| GCAAAGGGCAGGGTTGCAAA+AGG | 0.560410 | 7:-95299921 | MsG0780041800.01.T01:CDS |
| TTTGGACCGGGTTCGATCAG+AGG | 0.562259 | 7:+95300382 | None:intergenic |
| CCATATGCCACTCACTGAGT+TGG | 0.569030 | 7:+95300021 | None:intergenic |
| GTTAAAAGGAAGTTGCTGAA+AGG | 0.569181 | 7:-95300146 | MsG0780041800.01.T01:CDS |
| GCAAGAGTTGTGAGAGACGG+TGG | 0.571620 | 7:+95301095 | None:intergenic |
| TGGCTGTATCGGTGTCAAGT+TGG | 0.573119 | 7:+95301059 | None:intergenic |
| ACTGGCTTATACTGAGGCAA+AGG | 0.574125 | 7:-95299937 | MsG0780041800.01.T01:CDS |
| AACCAGCTTGTATTTGGACC+GGG | 0.576851 | 7:+95300370 | None:intergenic |
| CTTATCAACAGAGTCATCCC+AGG | 0.582184 | 7:+95299794 | None:intergenic |
| CTGGCTTATACTGAGGCAAA+GGG | 0.585254 | 7:-95299936 | MsG0780041800.01.T01:CDS |
| ATAAGTCCTCTGATCGAACC+CGG | 0.585371 | 7:-95300388 | MsG0780041800.01.T01:CDS |
| ATCCACCAGGTAAATTGGTG+GGG | 0.585932 | 7:+95300985 | None:intergenic |
| AACCCGGTCCAAATACAAGC+TGG | 0.588921 | 7:-95300372 | MsG0780041800.01.T01:CDS |
| TGACATTATTCCATTTGGCA+AGG | 0.590067 | 7:+95300817 | None:intergenic |
| TTATACTGAGGCAAAGGGCA+GGG | 0.590627 | 7:-95299931 | MsG0780041800.01.T01:CDS |
| CATTTCTGTATTCATGCTGG+TGG | 0.590993 | 7:-95300077 | MsG0780041800.01.T01:CDS |
| AACAGAAACAGGGACGCTGA+CGG | 0.594758 | 7:+95299767 | None:intergenic |
| GAGTAGAACAATTGAACCGA+TGG | 0.597177 | 7:+95301039 | None:intergenic |
| AAATCCACCAGGTAAATTGG+TGG | 0.601519 | 7:+95300983 | None:intergenic |
| AACCTGCTCTTGACAAAATG+CGG | 0.602486 | 7:+95300855 | None:intergenic |
| GTATGAACTGGCTTATACTG+AGG | 0.604352 | 7:-95299943 | MsG0780041800.01.T01:CDS |
| TGTGAAAATGAGAATGGTTG+TGG | 0.605218 | 7:+95301177 | None:intergenic |
| ATCCCCACCAATTTACCTGG+TGG | 0.607799 | 7:-95300987 | MsG0780041800.01.T01:CDS |
| ATCGGTGAGTTGGAACTGAA+CGG | 0.608509 | 7:+95301126 | None:intergenic |
| ACAATCATTGCAGAAAGTGA+AGG | 0.609013 | 7:+95300647 | None:intergenic |
| ACCAGAAAGAAGACGAGACA+GGG | 0.610150 | 7:-95300295 | MsG0780041800.01.T01:CDS |
| GTGTAACAGTGCTGTGTGGA+AGG | 0.610162 | 7:-95299859 | MsG0780041800.01.T01:CDS |
| TTTAAGAAGCAACAGAAACA+GGG | 0.614888 | 7:+95299757 | None:intergenic |
| CGGTGAGGAAGAGTAAGAGA+GGG | 0.614974 | 7:+95301146 | None:intergenic |
| CGAGCAAGAGTTGTGAGAGA+CGG | 0.627180 | 7:+95301092 | None:intergenic |
| GACGAGTGTGAAAATGAGAA+TGG | 0.628164 | 7:+95301171 | None:intergenic |
| ACGGTGAGGAAGAGTAAGAG+AGG | 0.633167 | 7:+95301145 | None:intergenic |
| CTACGCGGTGGTCTTGAGCA+CGG | 0.635511 | 7:-95300507 | MsG0780041800.01.T01:CDS |
| GAAAATCCGGTAAACGTCGT+CGG | 0.635960 | 7:+95301254 | None:intergenic |
| GCTACAAACCGGAGAAAGAG+CGG | 0.638965 | 7:-95300955 | MsG0780041800.01.T01:CDS |
| AGTGGCATATGGAACCGTCT+CGG | 0.641136 | 7:-95300010 | MsG0780041800.01.T01:CDS |
| TGTAGCACGCAAAATCCACC+AGG | 0.643428 | 7:+95300972 | None:intergenic |
| CTTGACACCGATACAGCCAT+CGG | 0.644102 | 7:-95301055 | MsG0780041800.01.T01:CDS |
| GGGTCGCAACAGCATAGACA+TGG | 0.648812 | 7:-95301338 | MsG0780041800.01.T01:CDS |
| TTATCAACAGAGTCATCCCA+GGG | 0.649243 | 7:+95299795 | None:intergenic |
| AGAATCTCCAACTCAGTGAG+TGG | 0.655119 | 7:-95300028 | MsG0780041800.01.T01:CDS |
| TGTATCGGTGTCAAGTTGGA+CGG | 0.658526 | 7:+95301063 | None:intergenic |
| CTATGCAGAGTCATCCGAGA+CGG | 0.659543 | 7:+95299996 | None:intergenic |
| CTTATTGGAAAGAAGTATAG+CGG | 0.661996 | 7:+95300406 | None:intergenic |
| CATGGATAAAGAAAGACTAA+CGG | 0.662335 | 7:-95301320 | MsG0780041800.01.T01:CDS |
| GCGCGACTTGCCCATCGTCG+GGG | 0.665127 | 7:-95299832 | MsG0780041800.01.T01:CDS |
| AAATCCAAATTCCTACGCGG+TGG | 0.667104 | 7:-95300519 | MsG0780041800.01.T01:CDS |
| GAAAGAGCGGAAAATAGCAG+TGG | 0.668978 | 7:-95300942 | MsG0780041800.01.T01:CDS |
| CGTGCTCAAGACCACCGCGT+AGG | 0.672026 | 7:+95300508 | None:intergenic |
| ATTAAAAGCTATAATCTCGG+AGG | 0.675727 | 7:-95300599 | MsG0780041800.01.T01:CDS |
| TCGCGTAGTACAGACCGAAG+AGG | 0.689821 | 7:+95301014 | None:intergenic |
| TTTCAAAGATTCAACCTCCG+CGG | 0.705846 | 7:-95301287 | MsG0780041800.01.T01:CDS |
| TGAGTTGGAACTGAACGGTG+AGG | 0.720930 | 7:+95301131 | None:intergenic |
| TTAAGTGTAACAGTGCTGTG+TGG | 0.723760 | 7:-95299863 | MsG0780041800.01.T01:CDS |
| GGATAAAGAAAGACTAACGG+CGG | 0.724763 | 7:-95301317 | MsG0780041800.01.T01:CDS |
| AGCAAATCCAAATTCCTACG+CGG | 0.758527 | 7:-95300522 | MsG0780041800.01.T01:CDS |
| TATCAACAGAGTCATCCCAG+GGG | 0.818112 | 7:+95299796 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTAAAAGCTATAATCT+CGG | - | Chr7:95300496-95300515 | MsG0780041800.01.T01:CDS | 20.0% |
| !!! | AATTTGAAATCTGGTATATA+AGG | + | Chr7:95300991-95301010 | None:intergenic | 20.0% |
| ! | AAAACAAACATAACAACGTT+GGG | - | Chr7:95300880-95300899 | MsG0780041800.01.T01:CDS | 25.0% |
| ! | ATTTGCTTTCAAAAGATCTT+TGG | + | Chr7:95300563-95300582 | None:intergenic | 25.0% |
| ! | GTTAAAATGTTAGAAGATAG+TGG | - | Chr7:95300187-95300206 | MsG0780041800.01.T01:CDS | 25.0% |
| !! | TCAAAAGCTAATTTGAAATC+TGG | + | Chr7:95301000-95301019 | None:intergenic | 25.0% |
| !! | TTTTTGTGTCTTTGGTTAAA+AGG | - | Chr7:95300938-95300957 | MsG0780041800.01.T01:CDS | 25.0% |
| AAACTCAAGTACGTAAAGTT+AGG | - | Chr7:95299878-95299897 | MsG0780041800.01.T01:CDS | 30.0% | |
| AACATGAACTGTTCAGAAAA+TGG | + | Chr7:95300919-95300938 | None:intergenic | 30.0% | |
| AAGTACGTAAAGTTAGGTTA+TGG | - | Chr7:95299884-95299903 | MsG0780041800.01.T01:CDS | 30.0% | |
| ATTAAAAGCTATAATCTCGG+AGG | - | Chr7:95300499-95300518 | MsG0780041800.01.T01:CDS | 30.0% | |
| CATGGATAAAGAAAGACTAA+CGG | - | Chr7:95299778-95299797 | MsG0780041800.01.T01:CDS | 30.0% | |
| GAAAACAAACATAACAACGT+TGG | - | Chr7:95300879-95300898 | MsG0780041800.01.T01:CDS | 30.0% | |
| ! | ATTTCCAAAGTACCAATTGA+GGG | + | Chr7:95300626-95300645 | None:intergenic | 30.0% |
| ! | CTTATTGGAAAGAAGTATAG+CGG | + | Chr7:95300695-95300714 | None:intergenic | 30.0% |
| ! | TCTAATTGCATTTTCCGAAT+GGG | - | Chr7:95300664-95300683 | MsG0780041800.01.T01:CDS | 30.0% |
| ! | TTCATTGGCTAGAGAATTAA+TGG | - | Chr7:95300837-95300856 | MsG0780041800.01.T01:CDS | 30.0% |
| ! | TTCTAATTGCATTTTCCGAA+TGG | - | Chr7:95300663-95300682 | MsG0780041800.01.T01:CDS | 30.0% |
| !!! | GTTCATGTTTTTTGTGTCTT+TGG | - | Chr7:95300930-95300949 | MsG0780041800.01.T01:CDS | 30.0% |
| ACAAGAATGTCAATGTCTCT+TGG | + | Chr7:95300403-95300422 | None:intergenic | 35.0% | |
| ACAATCATTGCAGAAAGTGA+AGG | + | Chr7:95300454-95300473 | None:intergenic | 35.0% | |
| ATTGTTCTACTCTTCCTCTT+CGG | - | Chr7:95300070-95300089 | MsG0780041800.01.T01:CDS | 35.0% | |
| CATACAGTTAGAACCCATAA+AGG | - | Chr7:95300751-95300770 | MsG0780041800.01.T01:CDS | 35.0% | |
| GAACATTTCTGTATTCATGC+TGG | - | Chr7:95301018-95301037 | MsG0780041800.01.T01:CDS | 35.0% | |
| GCTTCTTTCATGCATAGATT+TGG | + | Chr7:95300313-95300332 | None:intergenic | 35.0% | |
| GGACTTGACATTATTCCATT+TGG | + | Chr7:95300289-95300308 | None:intergenic | 35.0% | |
| GTTAAAAGGAAGTTGCTGAA+AGG | - | Chr7:95300952-95300971 | MsG0780041800.01.T01:CDS | 35.0% | |
| TCAGAAAATGGCAAAACCAA+TGG | + | Chr7:95300907-95300926 | None:intergenic | 35.0% | |
| TCTTTCATGCATAGATTTGG+TGG | + | Chr7:95300310-95300329 | None:intergenic | 35.0% | |
| TGACATTATTCCATTTGGCA+AGG | + | Chr7:95300284-95300303 | None:intergenic | 35.0% | |
| TGTATGAACCAGCTTGTATT+TGG | + | Chr7:95300737-95300756 | None:intergenic | 35.0% | |
| TGTGAAAATGAGAATGGTTG+TGG | + | Chr7:95299924-95299943 | None:intergenic | 35.0% | |
| TTAACCCTCAATTGGTACTT+TGG | - | Chr7:95300619-95300638 | MsG0780041800.01.T01:CDS | 35.0% | |
| ! | ATTTTGTCAAGAGCAGGTTT+AGG | - | Chr7:95300247-95300266 | MsG0780041800.01.T01:CDS | 35.0% |
| ! | CATTTCCAAAGTACCAATTG+AGG | + | Chr7:95300627-95300646 | None:intergenic | 35.0% |
| ! | TTAGAAGATAGTGGCGAATT+CGG | - | Chr7:95300196-95300215 | MsG0780041800.01.T01:CDS | 35.0% |
| ! | TTTACCGGATTTTCTACAGA+CGG | - | Chr7:95299853-95299872 | MsG0780041800.01.T01:CDS | 35.0% |
| !! | TGTTTGTTCTTAGCTTGTAG+TGG | + | Chr7:95300480-95300499 | None:intergenic | 35.0% |
| AAATCCACCAGGTAAATTGG+TGG | + | Chr7:95300118-95300137 | None:intergenic | 40.0% | |
| AACCTGCTCTTGACAAAATG+CGG | + | Chr7:95300246-95300265 | None:intergenic | 40.0% | |
| AAGCTATAATCTCGGAGGTA+TGG | - | Chr7:95300504-95300523 | MsG0780041800.01.T01:CDS | 40.0% | |
| AATCCACCAGGTAAATTGGT+GGG | + | Chr7:95300117-95300136 | None:intergenic | 40.0% | |
| AATTGAACCGATGGCTGTAT+CGG | + | Chr7:95300053-95300072 | None:intergenic | 40.0% | |
| ACACTTCAAGCAGTTCTCTA+TGG | - | Chr7:95301133-95301152 | MsG0780041800.01.T01:CDS | 40.0% | |
| AGAGAATTAATGGCTGTTGC+AGG | - | Chr7:95300847-95300866 | MsG0780041800.01.T01:CDS | 40.0% | |
| AGCAAATCCAAATTCCTACG+CGG | - | Chr7:95300576-95300595 | MsG0780041800.01.T01:CDS | 40.0% | |
| ATTGCAGAAAGTGAAGGAGT+TGG | + | Chr7:95300448-95300467 | None:intergenic | 40.0% | |
| CAGTTCTCTATGGTATGAAC+TGG | - | Chr7:95301143-95301162 | MsG0780041800.01.T01:CDS | 40.0% | |
| CATTTCTGTATTCATGCTGG+TGG | - | Chr7:95301021-95301040 | MsG0780041800.01.T01:CDS | 40.0% | |
| CGGAGAATTTAACCCTCAAT+TGG | - | Chr7:95300611-95300630 | MsG0780041800.01.T01:CDS | 40.0% | |
| CTTGTCATCAGCTCCTTTAT+GGG | + | Chr7:95300767-95300786 | None:intergenic | 40.0% | |
| GAAGCAGAAGCTGTAATGTT+TGG | - | Chr7:95300340-95300359 | MsG0780041800.01.T01:CDS | 40.0% | |
| GACGAGTGTGAAAATGAGAA+TGG | + | Chr7:95299930-95299949 | None:intergenic | 40.0% | |
| GAGTAGAACAATTGAACCGA+TGG | + | Chr7:95300062-95300081 | None:intergenic | 40.0% | |
| GCAAAATCCACCAGGTAAAT+TGG | + | Chr7:95300121-95300140 | None:intergenic | 40.0% | |
| GGATAAAGAAAGACTAACGG+CGG | - | Chr7:95299781-95299800 | MsG0780041800.01.T01:CDS | 40.0% | |
| TCTTGTCATCAGCTCCTTTA+TGG | + | Chr7:95300768-95300787 | None:intergenic | 40.0% | |
| TTAAGTGTAACAGTGCTGTG+TGG | - | Chr7:95301235-95301254 | MsG0780041800.01.T01:CDS | 40.0% | |
| TTATCAACAGAGTCATCCCA+GGG | + | Chr7:95301306-95301325 | None:intergenic | 40.0% | |
| TTCACCGTCTGTAGAAAATC+CGG | + | Chr7:95299860-95299879 | None:intergenic | 40.0% | |
| TTGCAGAAAGTGAAGGAGTT+GGG | + | Chr7:95300447-95300466 | None:intergenic | 40.0% | |
| TTTCAAAGATTCAACCTCCG+CGG | - | Chr7:95299811-95299830 | MsG0780041800.01.T01:CDS | 40.0% | |
| ! | AATTGCATTTTCCGAATGGG+TGG | - | Chr7:95300667-95300686 | MsG0780041800.01.T01:CDS | 40.0% |
| ! | AGCTATAATCTCGGAGGTAT+GGG | - | Chr7:95300505-95300524 | MsG0780041800.01.T01:CDS | 40.0% |
| ! | GTATGAACTGGCTTATACTG+AGG | - | Chr7:95301155-95301174 | MsG0780041800.01.T01:CDS | 40.0% |
| !! | AGGGAAAGTTGGTGTTTCAT+TGG | - | Chr7:95300822-95300841 | MsG0780041800.01.T01:CDS | 40.0% |
| !! | GACGCACTTTTTGCTAAAAC+AGG | - | Chr7:95300370-95300389 | MsG0780041800.01.T01:CDS | 40.0% |
| AAATCCAAATTCCTACGCGG+TGG | - | Chr7:95300579-95300598 | MsG0780041800.01.T01:CDS | 45.0% | |
| AACCAGCTTGTATTTGGACC+GGG | + | Chr7:95300731-95300750 | None:intergenic | 45.0% | |
| ACCAGAAAGAAGACGAGACA+GGG | - | Chr7:95300803-95300822 | MsG0780041800.01.T01:CDS | 45.0% | |
| AGAATCTCCAACTCAGTGAG+TGG | - | Chr7:95301070-95301089 | MsG0780041800.01.T01:CDS | 45.0% | |
| AGGAAGTTGCTGAAAGGTTC+AGG | - | Chr7:95300958-95300977 | MsG0780041800.01.T01:CDS | 45.0% | |
| ATAAGTCCTCTGATCGAACC+CGG | - | Chr7:95300710-95300729 | MsG0780041800.01.T01:CDS | 45.0% | |
| ATCCACCAGGTAAATTGGTG+GGG | + | Chr7:95300116-95300135 | None:intergenic | 45.0% | |
| CAAAATCCGACGACGTTTAC+CGG | - | Chr7:95299838-95299857 | MsG0780041800.01.T01:CDS | 45.0% | |
| CATAACAACGTTGGGTCCAT+TGG | - | Chr7:95300888-95300907 | MsG0780041800.01.T01:CDS | 45.0% | |
| CGGATGACTCTGCATAGATT+TGG | - | Chr7:95301108-95301127 | MsG0780041800.01.T01:CDS | 45.0% | |
| CTGGCTTATACTGAGGCAAA+GGG | - | Chr7:95301162-95301181 | MsG0780041800.01.T01:CDS | 45.0% | |
| CTTATCAACAGAGTCATCCC+AGG | + | Chr7:95301307-95301326 | None:intergenic | 45.0% | |
| GAAAATCCGGTAAACGTCGT+CGG | + | Chr7:95299847-95299866 | None:intergenic | 45.0% | |
| GAAAGAGCGGAAAATAGCAG+TGG | - | Chr7:95300156-95300175 | MsG0780041800.01.T01:CDS | 45.0% | |
| GAACCAGCTTGTATTTGGAC+CGG | + | Chr7:95300732-95300751 | None:intergenic | 45.0% | |
| GACGAAACTTCCTTGCCAAA+TGG | - | Chr7:95300271-95300290 | MsG0780041800.01.T01:CDS | 45.0% | |
| GGTTCGATCAGAGGACTTAT+TGG | + | Chr7:95300710-95300729 | None:intergenic | 45.0% | |
| TACCAGAAAGAAGACGAGAC+AGG | - | Chr7:95300802-95300821 | MsG0780041800.01.T01:CDS | 45.0% | |
| TATCAACAGAGTCATCCCAG+GGG | + | Chr7:95301305-95301324 | None:intergenic | 45.0% | |
| TTATACTGAGGCAAAGGGCA+GGG | - | Chr7:95301167-95301186 | MsG0780041800.01.T01:CDS | 45.0% | |
| ! | ACTGGCTTATACTGAGGCAA+AGG | - | Chr7:95301161-95301180 | MsG0780041800.01.T01:CDS | 45.0% |
| ! | ATCGGTGAGTTGGAACTGAA+CGG | + | Chr7:95299975-95299994 | None:intergenic | 45.0% |
| ! | GGATTTTGCGTGCTACAAAC+CGG | - | Chr7:95300132-95300151 | MsG0780041800.01.T01:CDS | 45.0% |
| !! | GCTATTTTCCGCTCTTTCTC+CGG | + | Chr7:95300154-95300173 | None:intergenic | 45.0% |
| !! | TCGTCGGATTTTGATAACCG+CGG | + | Chr7:95299831-95299850 | None:intergenic | 45.0% |
| !! | TGTATCGGTGTCAAGTTGGA+CGG | + | Chr7:95300038-95300057 | None:intergenic | 45.0% |
| !!! | GAGACGGTGGAGTTTTAGAT+CGG | + | Chr7:95299993-95300012 | None:intergenic | 45.0% |
| !!! | GGAGTTTTAGATCGGTGAGT+TGG | + | Chr7:95299985-95300004 | None:intergenic | 45.0% |
| AACAGAAACAGGGACGCTGA+CGG | + | Chr7:95301334-95301353 | None:intergenic | 50.0% | |
| AACCCGGTCCAAATACAAGC+TGG | - | Chr7:95300726-95300745 | MsG0780041800.01.T01:CDS | 50.0% | |
| AAGACCACCGCGTAGGAATT+TGG | + | Chr7:95300586-95300605 | None:intergenic | 50.0% | |
| ACGATCCCCACCAATTTACC+TGG | - | Chr7:95300108-95300127 | MsG0780041800.01.T01:CDS | 50.0% | |
| ACGGTGAGGAAGAGTAAGAG+AGG | + | Chr7:95299956-95299975 | None:intergenic | 50.0% | |
| AGTGGCATATGGAACCGTCT+CGG | - | Chr7:95301088-95301107 | MsG0780041800.01.T01:CDS | 50.0% | |
| ATCCCCACCAATTTACCTGG+TGG | - | Chr7:95300111-95300130 | MsG0780041800.01.T01:CDS | 50.0% | |
| CAGGGTTGCAAAAGGAGATC+GGG | - | Chr7:95301185-95301204 | MsG0780041800.01.T01:CDS | 50.0% | |
| CCAACTCAGTGAGTGGCATA+TGG | - | Chr7:95301077-95301096 | MsG0780041800.01.T01:CDS | 50.0% | |
| CCATATGCCACTCACTGAGT+TGG | + | Chr7:95301080-95301099 | None:intergenic | 50.0% | |
| CGAGCAAGAGTTGTGAGAGA+CGG | + | Chr7:95300009-95300028 | None:intergenic | 50.0% | |
| CGGTGAGGAAGAGTAAGAGA+GGG | + | Chr7:95299955-95299974 | None:intergenic | 50.0% | |
| CTATGCAGAGTCATCCGAGA+CGG | + | Chr7:95301105-95301124 | None:intergenic | 50.0% | |
| CTTATACTGAGGCAAAGGGC+AGG | - | Chr7:95301166-95301185 | MsG0780041800.01.T01:CDS | 50.0% | |
| CTTGACACCGATACAGCCAT+CGG | - | Chr7:95300043-95300062 | MsG0780041800.01.T01:CDS | 50.0% | |
| GAAGACGAGACAGGGAAAGT+TGG | - | Chr7:95300811-95300830 | MsG0780041800.01.T01:CDS | 50.0% | |
| GCAGGGTTGCAAAAGGAGAT+CGG | - | Chr7:95301184-95301203 | MsG0780041800.01.T01:CDS | 50.0% | |
| GCTACAAACCGGAGAAAGAG+CGG | - | Chr7:95300143-95300162 | MsG0780041800.01.T01:CDS | 50.0% | |
| GTGTAACAGTGCTGTGTGGA+AGG | - | Chr7:95301239-95301258 | MsG0780041800.01.T01:CDS | 50.0% | |
| TCCCTGTCTCGTCTTCTTTC+TGG | + | Chr7:95300807-95300826 | None:intergenic | 50.0% | |
| TGTAGCACGCAAAATCCACC+AGG | + | Chr7:95300129-95300148 | None:intergenic | 50.0% | |
| TTGCAAAAGGAGATCGGGTC+TGG | - | Chr7:95301190-95301209 | MsG0780041800.01.T01:CDS | 50.0% | |
| ! | TGAGTTGGAACTGAACGGTG+AGG | + | Chr7:95299970-95299989 | None:intergenic | 50.0% |
| !! | TCGGATTTTGATAACCGCGG+AGG | + | Chr7:95299828-95299847 | None:intergenic | 50.0% |
| !! | TGGCTGTATCGGTGTCAAGT+TGG | + | Chr7:95300042-95300061 | None:intergenic | 50.0% |
| ACAGAAACAGGGACGCTGAC+GGG | + | Chr7:95301333-95301352 | None:intergenic | 55.0% | |
| CGGGTCTGGCAGATTGCATT+CGG | - | Chr7:95301204-95301223 | MsG0780041800.01.T01:CDS | 55.0% | |
| CTGGCAGATTGCATTCGGGT+CGG | - | Chr7:95301209-95301228 | MsG0780041800.01.T01:CDS | 55.0% | |
| GCAAAGGGCAGGGTTGCAAA+AGG | - | Chr7:95301177-95301196 | MsG0780041800.01.T01:CDS | 55.0% | |
| GCAAGAGTTGTGAGAGACGG+TGG | + | Chr7:95300006-95300025 | None:intergenic | 55.0% | |
| GGGTCGCAACAGCATAGACA+TGG | - | Chr7:95299760-95299779 | MsG0780041800.01.T01:CDS | 55.0% | |
| GGGTCTGGCAGATTGCATTC+GGG | - | Chr7:95301205-95301224 | MsG0780041800.01.T01:CDS | 55.0% | |
| TCGCGTAGTACAGACCGAAG+AGG | + | Chr7:95300087-95300106 | None:intergenic | 55.0% | |
| TGGCAGATTGCATTCGGGTC+GGG | - | Chr7:95301210-95301229 | MsG0780041800.01.T01:CDS | 55.0% | |
| TTTGGACCGGGTTCGATCAG+AGG | + | Chr7:95300719-95300738 | None:intergenic | 55.0% | |
| ! | CGCCGCATTTTGTCAAGAGC+AGG | - | Chr7:95300241-95300260 | MsG0780041800.01.T01:CDS | 55.0% |
| ! | GGAGGTATGGGTTGTAGTGC+TGG | - | Chr7:95300517-95300536 | MsG0780041800.01.T01:CDS | 55.0% |
| ACTTGCCCATCGTCGGGGAT+TGG | - | Chr7:95301271-95301290 | MsG0780041800.01.T01:CDS | 60.0% | |
| GTATAGCGGCGCCACCCATT+CGG | + | Chr7:95300681-95300700 | None:intergenic | 60.0% | |
| ! | CTACGCGGTGGTCTTGAGCA+CGG | - | Chr7:95300591-95300610 | MsG0780041800.01.T01:CDS | 60.0% |
| CGTGCTCAAGACCACCGCGT+AGG | + | Chr7:95300593-95300612 | None:intergenic | 65.0% | |
| GACGATGGGCAAGTCGCGCA+CGG | + | Chr7:95301265-95301284 | None:intergenic | 65.0% | |
| GTGCGCGACTTGCCCATCGT+CGG | - | Chr7:95301264-95301283 | MsG0780041800.01.T01:CDS | 65.0% | |
| TGCCCATCGTCGGGGATTGG+CGG | - | Chr7:95301274-95301293 | MsG0780041800.01.T01:CDS | 65.0% | |
| TGCGCGACTTGCCCATCGTC+GGG | - | Chr7:95301265-95301284 | MsG0780041800.01.T01:CDS | 65.0% | |
| CCCCGCCAATCCCCGACGAT+GGG | + | Chr7:95301279-95301298 | None:intergenic | 70.0% | |
| GCGCGACTTGCCCATCGTCG+GGG | - | Chr7:95301266-95301285 | MsG0780041800.01.T01:CDS | 70.0% | |
| ! | CCCATCGTCGGGGATTGGCG+GGG | - | Chr7:95301276-95301295 | MsG0780041800.01.T01:CDS | 70.0% |
| ! | GCCCATCGTCGGGGATTGGC+GGG | - | Chr7:95301275-95301294 | MsG0780041800.01.T01:CDS | 70.0% |
| ! | GGATTGGCGGGGCAACCCCT+GGG | - | Chr7:95301287-95301306 | MsG0780041800.01.T01:CDS | 70.0% |
| GCCCCGCCAATCCCCGACGA+TGG | + | Chr7:95301280-95301299 | None:intergenic | 75.0% | |
| ! | GGGATTGGCGGGGCAACCCC+TGG | - | Chr7:95301286-95301305 | MsG0780041800.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 95299758 | 95301362 | 95299758 | ID=MsG0780041800.01;Name=MsG0780041800.01 |
| Chr7 | mRNA | 95299758 | 95301362 | 95299758 | ID=MsG0780041800.01.T01;Parent=MsG0780041800.01;Name=MsG0780041800.01.T01;_AED=0.09;_eAED=0.09;_QI=0|-1|0|1|-1|1|1|0|534 |
| Chr7 | exon | 95299758 | 95301362 | 95299758 | ID=MsG0780041800.01.T01:exon:21001;Parent=MsG0780041800.01.T01 |
| Chr7 | CDS | 95299758 | 95301362 | 95299758 | ID=MsG0780041800.01.T01:cds;Parent=MsG0780041800.01.T01 |
| Gene Sequence |
| Protein sequence |
