AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017647.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017647.01.T01 MTR_3g110160 87.371 483 15 3 1 442 1 478 0.0 850
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017647.01.T01 AT4G32770 62.579 473 130 5 17 442 15 487 0.0 605

Find 149 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCCAATCACACAATTTC+TGG 0.153393 3:+99033837 MsG0380017647.01.T01:CDS
AACATAAAACATAATGTAAT+TGG 0.233034 3:-99037326 None:intergenic
GGGAGGTGTAGGAGAGTAAA+TGG 0.240767 3:-99033489 None:intergenic
CGTTCCCGAGAAAATGGTTT+TGG 0.250397 3:+99036160 MsG0380017647.01.T01:CDS
AAGTAGCTACTTGGGGTTAT+TGG 0.292450 3:+99037259 MsG0380017647.01.T01:CDS
GACCTAGGTTTACTGGTGTT+GGG 0.295673 3:+99033771 MsG0380017647.01.T01:CDS
ACTTTGGAATTAGCACAATA+TGG 0.306142 3:+99033749 MsG0380017647.01.T01:CDS
CCTGTTCTTAGCCGTGCTAT+TGG 0.308781 3:+99037897 MsG0380017647.01.T01:CDS
GTGGAGCGTTCCCGAGAAAA+TGG 0.320779 3:+99036154 MsG0380017647.01.T01:CDS
GTGAAAATGGCAGATAATAT+TGG 0.340328 3:+99037794 MsG0380017647.01.T01:intron
GTGTTTAGGTATCACTTTGA+TGG 0.344307 3:+99033611 MsG0380017647.01.T01:intron
TTCCCCAGAAATTGTGTGAT+TGG 0.351635 3:-99033841 None:intergenic
TTCCAAAGTTGTCAATTCCT+TGG 0.352580 3:-99033735 None:intergenic
GTCACTCCCCTTTGGAATCA+AGG 0.354231 3:+99035000 MsG0380017647.01.T01:CDS
CAAGGTTTCATTTGCGATGA+TGG 0.355793 3:+99035018 MsG0380017647.01.T01:CDS
TGGTGGATTGAGACAAATTC+CGG 0.358362 3:+99036555 MsG0380017647.01.T01:CDS
CAATATGGACCTAGGTTTAC+TGG 0.360000 3:+99033764 MsG0380017647.01.T01:CDS
TCCCCAGAAATTGTGTGATT+GGG 0.365123 3:-99033840 None:intergenic
TAGCCGTGCTATTGGATTAC+CGG 0.369394 3:+99037905 MsG0380017647.01.T01:CDS
GGTGTTGGGGCACAAATTCT+TGG 0.371589 3:+99033785 MsG0380017647.01.T01:CDS
CATCTTATTCAGAAAAGAAC+TGG 0.385152 3:+99036130 MsG0380017647.01.T01:CDS
TCCAAAGTTGTCAATTCCTT+GGG 0.391255 3:-99033734 None:intergenic
GGACCTAGGTTTACTGGTGT+TGG 0.399070 3:+99033770 MsG0380017647.01.T01:CDS
TATAGTACACGTCCTGTATA+TGG 0.403430 3:+99035168 MsG0380017647.01.T01:CDS
TGTAGGAGAGTAAATGGGTT+TGG 0.412743 3:-99033483 None:intergenic
TACACGTCCTGTATATGGTT+GGG 0.419259 3:+99035173 MsG0380017647.01.T01:CDS
AACATATGGTCAACAGAGTC+TGG 0.422767 3:+99038981 MsG0380017647.01.T01:CDS
TATATGGTTGGGGTGATGTT+GGG 0.431491 3:+99035184 MsG0380017647.01.T01:CDS
AGGTAGGAATGAACTGATGT+TGG 0.434714 3:+99033978 MsG0380017647.01.T01:intron
GTATATGGTTGGGGTGATGT+TGG 0.436667 3:+99035183 MsG0380017647.01.T01:CDS
TTAGGAGGAACCTCCTTGTT+CGG 0.446056 3:-99034036 None:intergenic
TCCCAAGGAATTGACAACTT+TGG 0.457159 3:+99033733 MsG0380017647.01.T01:CDS
TCCCCAATCACACAATTTCT+GGG 0.459146 3:+99033838 MsG0380017647.01.T01:CDS
ATGGCCGGTGGCCTGTCAAC+AGG 0.465344 3:+99035276 MsG0380017647.01.T01:CDS
ATTCAATAGCTTGGTTTCCA+TGG 0.468249 3:-99033306 None:intergenic
GCGCAGATTGGAATTCACTA+TGG 0.470754 3:+99037189 MsG0380017647.01.T01:intron
GGATTACCGGTAGATGTAGA+TGG 0.471198 3:+99037918 MsG0380017647.01.T01:CDS
GAAGAAGAAACAGAGGAGGA+AGG 0.472031 3:-99033350 None:intergenic
ACATCACCCCAACCATATAC+AGG 0.478564 3:-99035180 None:intergenic
CCAATAGCACGGCTAAGAAC+AGG 0.479300 3:-99037897 None:intergenic
CATGGAATGGTGTTGTAAGC+TGG 0.479963 3:+99037235 MsG0380017647.01.T01:CDS
AAGAAAAGAACGTGTGATGT+TGG 0.482895 3:+99033188 MsG0380017647.01.T01:five_prime_UTR
AAAGAACGGTTGTGATGAAA+GGG 0.483907 3:-99033407 None:intergenic
AACAGAGTCTGGCCAATCAA+TGG 0.485084 3:+99038992 MsG0380017647.01.T01:CDS
TAAGCTGGGAAGTAGCTACT+TGG 0.490303 3:+99037250 MsG0380017647.01.T01:CDS
GAAGGAAAGTGAATAAGATA+AGG 0.490967 3:-99033332 None:intergenic
AAAGTGTAACGATCAGTCAT+TGG 0.497615 3:+99038951 MsG0380017647.01.T01:CDS
AAGCTGGGAAGTAGCTACTT+GGG 0.500867 3:+99037251 MsG0380017647.01.T01:CDS
AGATTGAGATTGTTGTTGTT+CGG 0.504947 3:-99033459 None:intergenic
GACATGGCAGCTCTAGAAGT+TGG 0.506366 3:+99037828 MsG0380017647.01.T01:CDS
GGTGGATTGAGACAAATTCC+GGG 0.506870 3:+99036556 MsG0380017647.01.T01:CDS
CACGCAAATTCTTCGAGGGT+TGG 0.507645 3:+99033639 MsG0380017647.01.T01:CDS
GACATTTGAAAATGCTGCAT+TGG 0.507859 3:+99036588 MsG0380017647.01.T01:CDS
GGAGGTGTAGGAGAGTAAAT+GGG 0.508025 3:-99033488 None:intergenic
CGATGATTAGTTTGAAAGAA+CGG 0.508053 3:-99033421 None:intergenic
GAGGGCCATGGTTTAACACT+TGG 0.509944 3:+99037853 MsG0380017647.01.T01:CDS
TCAAAATGTGGACGATGGCT+TGG 0.510509 3:-99039052 None:intergenic
AATGAAACCTTGATTCCAAA+GGG 0.511006 3:-99035007 None:intergenic
TCAAATGTCTCAGTTAGTCC+CGG 0.515148 3:-99036574 None:intergenic
ACCTAGGTTTACTGGTGTTG+GGG 0.516777 3:+99033772 MsG0380017647.01.T01:CDS
AAGATAGTTACCCGCTATGA+GGG 0.516871 3:-99033529 None:intergenic
GAAAGAACGGTTGTGATGAA+AGG 0.517625 3:-99033408 None:intergenic
AACTGCACGCAAATTCTTCG+AGG 0.519195 3:+99033634 MsG0380017647.01.T01:CDS
AACAGTAAAGACTGCTCGCT+GGG 0.520354 3:+99035143 MsG0380017647.01.T01:CDS
CACAGAAGTCAACTGCTGGC+TGG 0.521033 3:+99035211 MsG0380017647.01.T01:CDS
GGGGTGCGAAGTTGACGATT+GGG 0.522940 3:-99033509 None:intergenic
ATAAGGAGGATTCAATAGCT+TGG 0.526924 3:-99033315 None:intergenic
AAAGATAGTTACCCGCTATG+AGG 0.527165 3:-99033530 None:intergenic
GAACAAGGAGGTTCCTCCTA+AGG 0.529562 3:+99034038 MsG0380017647.01.T01:CDS
AGGGGTGCGAAGTTGACGAT+TGG 0.530318 3:-99033510 None:intergenic
TACATAAAACCTACCTTAGG+AGG 0.531597 3:-99034051 None:intergenic
GGAAAGTGAATAAGATAAGG+AGG 0.534088 3:-99033329 None:intergenic
GAAATTGCACTTACAGCCGC+TGG 0.534354 3:+99036535 MsG0380017647.01.T01:CDS
TTTAATGATAAAGTGTTCGA+AGG 0.534535 3:+99034970 MsG0380017647.01.T01:CDS
TGTGTGATTGGGGAGTATAT+TGG 0.535186 3:-99033829 None:intergenic
ACAGAGGAAACAGATTATAG+AGG 0.536656 3:-99037941 None:intergenic
AACTTCGCACCCCTCATAGC+GGG 0.537198 3:+99033519 MsG0380017647.01.T01:CDS
AAACAGTAAAGACTGCTCGC+TGG 0.537456 3:+99035142 MsG0380017647.01.T01:CDS
TGGTTTATGTCTGCAGACAA+TGG 0.543436 3:+99037279 MsG0380017647.01.T01:CDS
ACACGTCCTGTATATGGTTG+GGG 0.544633 3:+99035174 MsG0380017647.01.T01:CDS
GGTAGGAATGAACTGATGTT+GGG 0.544911 3:+99033979 MsG0380017647.01.T01:intron
TATGAATTTGTGCCATGGAA+TGG 0.547126 3:+99037222 MsG0380017647.01.T01:CDS
CAAGAATCATCATTCATCCA+TGG 0.547722 3:+99033289 MsG0380017647.01.T01:exon
GACAGCACATACCTGTTGAC+AGG 0.550591 3:-99035287 None:intergenic
CATTGGCAAATATGCATGGC+CGG 0.551128 3:+99035261 MsG0380017647.01.T01:CDS
TAGAAGTTGGAGGAGGGCCA+TGG 0.552177 3:+99037841 MsG0380017647.01.T01:CDS
GAATCTCAGGTTGGATAGAG+TGG 0.554904 3:+99036076 MsG0380017647.01.T01:intron
AGTTGACGATTGGGAGGTGT+AGG 0.555006 3:-99033500 None:intergenic
AGAAGAAGAAGAAACAGAGG+AGG 0.556467 3:-99033354 None:intergenic
CCCCAGAAATTGTGTGATTG+GGG 0.559399 3:-99033839 None:intergenic
AAATGAAACCTTGATTCCAA+AGG 0.560360 3:-99035008 None:intergenic
GTCAATTCCTTGGGAAACGC+AGG 0.564340 3:-99033725 None:intergenic
CCATGGTTTAACACTTGGAA+GGG 0.565373 3:+99037858 MsG0380017647.01.T01:CDS
GCCATGCATATTTGCCAATG+TGG 0.566045 3:-99035258 None:intergenic
CCCTTCCAAGTGTTAAACCA+TGG 0.566770 3:-99037858 None:intergenic
GCCATGGTTTAACACTTGGA+AGG 0.567755 3:+99037857 MsG0380017647.01.T01:CDS
GTTTCATTTGCGATGATGGA+AGG 0.568224 3:+99035022 MsG0380017647.01.T01:CDS
TAGAGGCCATCTACATCTAC+CGG 0.569072 3:-99037924 None:intergenic
GCAGCTCTAGAAGTTGGAGG+AGG 0.570437 3:+99037834 MsG0380017647.01.T01:CDS
TAACGATCAGTCATTGGAAG+GGG 0.572204 3:+99038957 MsG0380017647.01.T01:CDS
CAGCTTACAACACCATTCCA+TGG 0.573304 3:-99037234 None:intergenic
GAGTCTGGCCAATCAATGGA+AGG 0.576264 3:+99038996 MsG0380017647.01.T01:CDS
GGATAGAGTGGGATGGCGAG+AGG 0.577129 3:+99036088 MsG0380017647.01.T01:CDS
ATGGAATGGTGTTGTAAGCT+GGG 0.579542 3:+99037236 MsG0380017647.01.T01:CDS
TCATTGGAAGGGGAAACATA+TGG 0.581646 3:+99038967 MsG0380017647.01.T01:CDS
AATTAGCACAATATGGACCT+AGG 0.585162 3:+99033756 MsG0380017647.01.T01:CDS
TGAGAATCCTGCGTTTCCCA+AGG 0.588380 3:+99033718 MsG0380017647.01.T01:CDS
GTACACGTCCTGTATATGGT+TGG 0.589209 3:+99035172 MsG0380017647.01.T01:CDS
TGTAACGATCAGTCATTGGA+AGG 0.589645 3:+99038955 MsG0380017647.01.T01:CDS
ATGGCAGCTCTAGAAGTTGG+AGG 0.592674 3:+99037831 MsG0380017647.01.T01:CDS
AACAACAACATACTACAAGC+AGG 0.593340 3:-99037972 None:intergenic
AAATTCGAAACCTCCGAACA+AGG 0.593736 3:+99034023 MsG0380017647.01.T01:CDS
CATACCTGTTGACAGGCCAC+CGG 0.595777 3:-99035280 None:intergenic
AATCTCAGGTTGGATAGAGT+GGG 0.597137 3:+99036077 MsG0380017647.01.T01:intron
ATCTTATTCAGAAAAGAACT+GGG 0.601044 3:+99036131 MsG0380017647.01.T01:CDS
ATTGCACTTACAGCCGCTGG+TGG 0.602119 3:+99036538 MsG0380017647.01.T01:CDS
GGAGGAACCTCCTTGTTCGG+AGG 0.606309 3:-99034033 None:intergenic
TCTACACAGAAGTCAACTGC+TGG 0.606515 3:+99035207 MsG0380017647.01.T01:CDS
CAGATTGGAATTCACTATGG+TGG 0.609821 3:+99037192 MsG0380017647.01.T01:intron
GGACGATGGCTTGGTCATCA+AGG 0.612286 3:-99039043 None:intergenic
ATCCGAACAAGTTCAAAATG+TGG 0.612926 3:-99039064 None:intergenic
ACTGCACGCAAATTCTTCGA+GGG 0.619317 3:+99033635 MsG0380017647.01.T01:CDS
TATTCAGAAAAGAACTGGGG+TGG 0.619500 3:+99036135 MsG0380017647.01.T01:CDS
GTAACGATCAGTCATTGGAA+GGG 0.622498 3:+99038956 MsG0380017647.01.T01:CDS
ACCACATTGGCAAATATGCA+TGG 0.624184 3:+99035257 MsG0380017647.01.T01:CDS
TGCAGACAATGGAAATTATG+TGG 0.631618 3:+99037290 MsG0380017647.01.T01:CDS
AGCTGGGAAGTAGCTACTTG+GGG 0.631889 3:+99037252 MsG0380017647.01.T01:CDS
CCCCAATCACACAATTTCTG+GGG 0.639513 3:+99033839 MsG0380017647.01.T01:CDS
AGTCTGGCCAATCAATGGAA+GGG 0.646626 3:+99038997 MsG0380017647.01.T01:CDS
CAGCTCTAGAAGTTGGAGGA+GGG 0.650603 3:+99037835 MsG0380017647.01.T01:CDS
GTGCGAAGTTGACGATTGGG+AGG 0.658422 3:-99033506 None:intergenic
AAAGGGGAAGAATGTGCGTG+TGG 0.658861 3:-99033390 None:intergenic
CAAGCAGGTGGTTTAAACAG+AGG 0.659881 3:-99037957 None:intergenic
ATAGCACGGCTAAGAACAGG+TGG 0.660468 3:-99037894 None:intergenic
CAAGTTCAAAATGTGGACGA+TGG 0.661932 3:-99039057 None:intergenic
AAGAACGGTTGTGATGAAAG+GGG 0.663217 3:-99033406 None:intergenic
TGGCAAATATGCATGGCCGG+TGG 0.673011 3:+99035264 MsG0380017647.01.T01:CDS
TCAGGTTGGATAGAGTGGGA+TGG 0.674499 3:+99036081 MsG0380017647.01.T01:intron
CTACCGGTAATCCAATAGCA+CGG 0.689701 3:-99037908 None:intergenic
AACAACATACTACAAGCAGG+TGG 0.691343 3:-99037969 None:intergenic
ATTGGACGTGACAAGTGACA+TGG 0.693270 3:+99037812 MsG0380017647.01.T01:CDS
AGATAGTTACCCGCTATGAG+GGG 0.698566 3:-99033528 None:intergenic
CAACTTCGCACCCCTCATAG+CGG 0.701316 3:+99033518 MsG0380017647.01.T01:CDS
GCCCCAACACCAGTAAACCT+AGG 0.703555 3:-99033773 None:intergenic
AATTTGTCTCAATCCACCAG+CGG 0.711563 3:-99036551 None:intergenic
ATGAAACCTTGATTCCAAAG+GGG 0.725706 3:-99035006 None:intergenic
TTCGAAACCTCCGAACAAGG+AGG 0.737221 3:+99034026 MsG0380017647.01.T01:CDS
TCTTATTCAGAAAAGAACTG+GGG 0.762832 3:+99036132 MsG0380017647.01.T01:CDS
GCATCAAAGTTACTACACAG+CGG 0.810320 3:+99032890 MsG0380017647.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATGTATAAATATAG+GGG - Chr3:99033077-99033096 None:intergenic 10.0%
!! AAAATGAAAAGAAAAAAAAA+AGG + Chr3:99038454-99038473 MsG0380017647.01.T01:intron 10.0%
!! TAAAGAATAATAATTATTTC+TGG - Chr3:99034907-99034926 None:intergenic 10.0%
!! TTGATACAAATTATAATTAT+AGG + Chr3:99035106-99035125 MsG0380017647.01.T01:intron 10.0%
!!! ATATAATTTTTTTGAACAAT+TGG + Chr3:99035710-99035729 MsG0380017647.01.T01:intron 10.0%
!!! ATTTTTATGTAATTCTAATA+TGG + Chr3:99033902-99033921 MsG0380017647.01.T01:intron 10.0%
!! AACATAAAACATAATGTAAT+TGG - Chr3:99037329-99037348 None:intergenic 15.0%
!! AAGAAATTATTTAGATTTAG+TGG + Chr3:99038195-99038214 MsG0380017647.01.T01:intron 15.0%
!! AATATAATATACTGATAGAA+AGG - Chr3:99037115-99037134 None:intergenic 15.0%
!! GAATACTAAAATTAAAATGT+GGG + Chr3:99037660-99037679 MsG0380017647.01.T01:intron 15.0%
!! GATAAAGTAAAGTTATTATA+AGG + Chr3:99034500-99034519 MsG0380017647.01.T01:intron 15.0%
!! TACAAATTATAATTATAGGT+CGG + Chr3:99035110-99035129 MsG0380017647.01.T01:intron 15.0%
!! TTAAATTGAAGTTCATATTA+GGG - Chr3:99038375-99038394 None:intergenic 15.0%
!! TTTAAATTGAAGTTCATATT+AGG - Chr3:99038376-99038395 None:intergenic 15.0%
!! TTTATTCAATTTATGTGTTT+AGG + Chr3:99033597-99033616 MsG0380017647.01.T01:intron 15.0%
!!! AAATAAATGTTGATGATAAT+AGG + Chr3:99036692-99036711 MsG0380017647.01.T01:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + Chr3:99035488-99035507 MsG0380017647.01.T01:intron 15.0%
!!! ATATTTTCTATGTATAAACA+TGG - Chr3:99038083-99038102 None:intergenic 15.0%
!!! CAAGTTAATTTTTTTTTGAA+TGG + Chr3:99033953-99033972 MsG0380017647.01.T01:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + Chr3:99035487-99035506 MsG0380017647.01.T01:intron 15.0%
!!! TAATTTTTTTTTGAATGGTT+AGG + Chr3:99033958-99033977 MsG0380017647.01.T01:intron 15.0%
!!! TGTATTTTGATTGAAAATTA+TGG + Chr3:99036304-99036323 MsG0380017647.01.T01:intron 15.0%
!! AAAGTGGAATATATTGAATT+GGG - Chr3:99033054-99033073 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + Chr3:99035512-99035531 MsG0380017647.01.T01:intron 20.0%
!! ACTTTATCATTAAATTCCTA+TGG - Chr3:99034964-99034983 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + Chr3:99035585-99035604 MsG0380017647.01.T01:intron 20.0%
!! ATGAATATACAAATCATACT+TGG + Chr3:99037406-99037425 MsG0380017647.01.T01:intron 20.0%
!! GGAATACTAAAATTAAAATG+TGG + Chr3:99037659-99037678 MsG0380017647.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + Chr3:99035586-99035605 MsG0380017647.01.T01:intron 20.0%
!! TAAATTGAAGTTCATATTAG+GGG - Chr3:99038374-99038393 None:intergenic 20.0%
!! TATTAACAATATTGAATCTC+AGG + Chr3:99036063-99036082 MsG0380017647.01.T01:intron 20.0%
!! TGAATATACAAATCATACTT+GGG + Chr3:99037407-99037426 MsG0380017647.01.T01:intron 20.0%
!! TTAATGTATAAGAATGTTCA+TGG + Chr3:99038139-99038158 MsG0380017647.01.T01:intron 20.0%
!! TTATACCCAATAATTAACTA+AGG - Chr3:99038414-99038433 None:intergenic 20.0%
!! TTTGTCTTTGATTAGATTAA+TGG + Chr3:99037751-99037770 MsG0380017647.01.T01:intron 20.0%
!!! ACTAGTTTTACTTATTTCAT+TGG + Chr3:99034762-99034781 MsG0380017647.01.T01:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + Chr3:99035489-99035508 MsG0380017647.01.T01:intron 20.0%
!!! CTAAATTTGTTGGAAATTAA+AGG - Chr3:99034823-99034842 None:intergenic 20.0%
!!! CTCAATTAATATATTTTTGC+AGG + Chr3:99037541-99037560 MsG0380017647.01.T01:intron 20.0%
!!! CTTTACTTTATCTTTTGTAA+AGG - Chr3:99034492-99034511 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + Chr3:99035622-99035641 MsG0380017647.01.T01:intron 20.0%
!!! TACATTATGTTTTATGTTGA+TGG + Chr3:99037331-99037350 MsG0380017647.01.T01:intron 20.0%
!!! TATGATAATGAACATTTACA+AGG + Chr3:99035788-99035807 MsG0380017647.01.T01:intron 20.0%
!!! TTCTATTGTTCTTTTTGTTT+TGG + Chr3:99036745-99036764 MsG0380017647.01.T01:intron 20.0%
!!! TTCTTTTCATTTTCATTGAT+TGG - Chr3:99038447-99038466 None:intergenic 20.0%
!!! TTTTCAATCAAAATACAAGA+AGG - Chr3:99036301-99036320 None:intergenic 20.0%
! AAATTTCCTTATATTGAGTG+TGG + Chr3:99038342-99038361 MsG0380017647.01.T01:intron 25.0%
! AAGAATGATTGGGTATTTAT+AGG + Chr3:99038913-99038932 MsG0380017647.01.T01:intron 25.0%
! AATGAATATGAGACTTTAAG+AGG - Chr3:99035910-99035929 None:intergenic 25.0%
! AATTTCCTTATATTGAGTGT+GGG + Chr3:99038343-99038362 MsG0380017647.01.T01:intron 25.0%
! AGAATGATTGGGTATTTATA+GGG + Chr3:99038914-99038933 MsG0380017647.01.T01:intron 25.0%
! AGAATTTGTGAAGAATGATT+GGG + Chr3:99038903-99038922 MsG0380017647.01.T01:intron 25.0%
! AGTTAATTATTGGGTATAAC+CGG + Chr3:99038415-99038434 MsG0380017647.01.T01:intron 25.0%
! ATCTTATTCAGAAAAGAACT+GGG + Chr3:99036131-99036150 MsG0380017647.01.T01:CDS 25.0%
! ATGCCTAAAACTAAATCTTT+GGG + Chr3:99038586-99038605 MsG0380017647.01.T01:intron 25.0%
! ATGTTAAATTTATTGTCGAG+TGG + Chr3:99036930-99036949 MsG0380017647.01.T01:intron 25.0%
! ATTTAGACTAATCAGACAAA+TGG + Chr3:99034837-99034856 MsG0380017647.01.T01:intron 25.0%
! ATTTCATCTGTTTCAAATTG+TGG + Chr3:99037013-99037032 MsG0380017647.01.T01:intron 25.0%
! ATTTGACAAAATCTATAGTG+AGG + Chr3:99036803-99036822 MsG0380017647.01.T01:intron 25.0%
! CAAAGTAGGTCAATTAAATT+GGG - Chr3:99035452-99035471 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG - Chr3:99033055-99033074 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + Chr3:99035511-99035530 MsG0380017647.01.T01:intron 25.0%
! GAAATAAGTAAAACTAGTTC+AGG - Chr3:99034760-99034779 None:intergenic 25.0%
! GAATATACAAATCATACTTG+GGG + Chr3:99037408-99037427 MsG0380017647.01.T01:intron 25.0%
! TAAAAGTTATTCACACTTGT+TGG + Chr3:99036008-99036027 MsG0380017647.01.T01:intron 25.0%
! TAGACTAAAACTGAAATGAT+AGG + Chr3:99035818-99035837 MsG0380017647.01.T01:intron 25.0%
! TATTAATCTACAATACTTGC+TGG - Chr3:99036372-99036391 None:intergenic 25.0%
! TATTATCCCTACAAAATTAG+AGG + Chr3:99038799-99038818 MsG0380017647.01.T01:intron 25.0%
! TCAAATAAGTCAATCCAAAT+AGG + Chr3:99034647-99034666 MsG0380017647.01.T01:intron 25.0%
! TGATGAATGTTATGTGAAAA+TGG + Chr3:99037781-99037800 MsG0380017647.01.T01:intron 25.0%
! TTATTGCTTGACAATTAGTT+TGG + Chr3:99035848-99035867 MsG0380017647.01.T01:intron 25.0%
! TTGACTATTAAGACTCTATT+TGG + Chr3:99034398-99034417 MsG0380017647.01.T01:intron 25.0%
!! AAAGTGTCTCAAAATAATTG+AGG + Chr3:99032956-99032975 MsG0380017647.01.T01:intron 25.0%
!! AATGTTTTCTTAAAACATGC+TGG + Chr3:99037499-99037518 MsG0380017647.01.T01:intron 25.0%
!! AGTTCTTTTCTGAATAAGAT+GGG - Chr3:99036131-99036150 None:intergenic 25.0%
!! TATTGCTTGACAATTAGTTT+GGG + Chr3:99035849-99035868 MsG0380017647.01.T01:intron 25.0%
!! TGTCATTTAAACATACATGA+GGG + Chr3:99034271-99034290 MsG0380017647.01.T01:intron 25.0%
!! TGTTCTAATTTGAAGTCTAA+TGG + Chr3:99036981-99037000 MsG0380017647.01.T01:intron 25.0%
!! TGTTTGCAAATGCTTTTATT+TGG + Chr3:99034931-99034950 MsG0380017647.01.T01:intron 25.0%
!! TTTAATGATAAAGTGTTCGA+AGG + Chr3:99034970-99034989 MsG0380017647.01.T01:CDS 25.0%
!! TTTTGTAGGGATAATATGAA+TGG - Chr3:99038795-99038814 None:intergenic 25.0%
!!! AATGTTGATGATAATAGGAA+TGG + Chr3:99036697-99036716 MsG0380017647.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + Chr3:99035621-99035640 MsG0380017647.01.T01:intron 25.0%
!!! TCTGATTAGTCTAAATTTGT+TGG - Chr3:99034833-99034852 None:intergenic 25.0%
!!! TTTTTTTGTATCTCACATAG+TGG + Chr3:99036461-99036480 MsG0380017647.01.T01:intron 25.0%
!!! TTTTTTTTGAATGGTTAGGT+AGG + Chr3:99033962-99033981 MsG0380017647.01.T01:intron 25.0%
AAATGAAACCTTGATTCCAA+AGG - Chr3:99035011-99035030 None:intergenic 30.0%
AAATGTCAATGGTAGAACAT+TGG + Chr3:99038834-99038853 MsG0380017647.01.T01:intron 30.0%
AACAATATTGAATCTCAGGT+TGG + Chr3:99036067-99036086 MsG0380017647.01.T01:intron 30.0%
AAGTAGTTGCGAAATTGTTT+GGG - Chr3:99034611-99034630 None:intergenic 30.0%
AATAAGCTGAAAGCAACTTA+TGG + Chr3:99034556-99034575 MsG0380017647.01.T01:intron 30.0%
AATGAAACCTTGATTCCAAA+GGG - Chr3:99035010-99035029 None:intergenic 30.0%
AATGATTGGGTATTTATAGG+GGG + Chr3:99038916-99038935 MsG0380017647.01.T01:intron 30.0%
AGGGAGATAAAACTAACTTA+AGG - Chr3:99038273-99038292 None:intergenic 30.0%
AGTAAATGAGTCAGATATTC+CGG - Chr3:99032931-99032950 None:intergenic 30.0%
ATCTGTGTGAAAAACCAAAA+TGG + Chr3:99033099-99033118 MsG0380017647.01.T01:intron 30.0%
ATGATAATAGGAATGGCTAA+AGG + Chr3:99036704-99036723 MsG0380017647.01.T01:intron 30.0%
ATTCAAGTAACCATAAAACG+AGG - Chr3:99036346-99036365 None:intergenic 30.0%
ATTGTTAACGTGTGTTTAGT+TGG + Chr3:99038163-99038182 MsG0380017647.01.T01:intron 30.0%
ATTTAAACATACATGAGGGT+AGG + Chr3:99034275-99034294 MsG0380017647.01.T01:intron 30.0%
ATTTCCTTATATTGAGTGTG+GGG + Chr3:99038344-99038363 MsG0380017647.01.T01:intron 30.0%
CAAAATGGTTCAGATATTTC+AGG + Chr3:99033114-99033133 MsG0380017647.01.T01:intron 30.0%
CAGTTTATGTGAAGCTATTA+TGG + Chr3:99035362-99035381 MsG0380017647.01.T01:intron 30.0%
CATCTTATTCAGAAAAGAAC+TGG + Chr3:99036130-99036149 MsG0380017647.01.T01:CDS 30.0%
CCAAAGTAGGTCAATTAAAT+TGG - Chr3:99035453-99035472 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG + Chr3:99035450-99035469 MsG0380017647.01.T01:intron 30.0%
GAAACAGATGAAATCACTAA+CGG - Chr3:99037007-99037026 None:intergenic 30.0%
GAAGGAAAGTGAATAAGATA+AGG - Chr3:99033335-99033354 None:intergenic 30.0%
GAATGATTGGGTATTTATAG+GGG + Chr3:99038915-99038934 MsG0380017647.01.T01:intron 30.0%
GAGAATTTGTGAAGAATGAT+TGG + Chr3:99038902-99038921 MsG0380017647.01.T01:intron 30.0%
GATGCCTAAAACTAAATCTT+TGG + Chr3:99038585-99038604 MsG0380017647.01.T01:intron 30.0%
GCTTAAAATCATGAATGATG+TGG + Chr3:99036903-99036922 MsG0380017647.01.T01:intron 30.0%
GGAGATAAAACTAACTTAAG+GGG - Chr3:99038271-99038290 None:intergenic 30.0%
GGATAATATGAATGGTCAAA+GGG - Chr3:99038787-99038806 None:intergenic 30.0%
GGGAGATAAAACTAACTTAA+GGG - Chr3:99038272-99038291 None:intergenic 30.0%
GTATACATAAAACCTACCTT+AGG - Chr3:99034057-99034076 None:intergenic 30.0%
GTGAAAATGGCAGATAATAT+TGG + Chr3:99037794-99037813 MsG0380017647.01.T01:intron 30.0%
GTGGACCTTAGTTAATTATT+GGG + Chr3:99038406-99038425 MsG0380017647.01.T01:intron 30.0%
TAAGTAGTTGCGAAATTGTT+TGG - Chr3:99034612-99034631 None:intergenic 30.0%
TATCTTTACAAGCTTGAGAA+AGG - Chr3:99037631-99037650 None:intergenic 30.0%
TCTTATTCAGAAAAGAACTG+GGG + Chr3:99036132-99036151 MsG0380017647.01.T01:CDS 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr3:99035496-99035515 MsG0380017647.01.T01:intron 30.0%
TGTATAAATATAGGGGAAAG+TGG - Chr3:99033070-99033089 None:intergenic 30.0%
TGTTTCAAATTGTGGTAACA+AGG + Chr3:99037021-99037040 MsG0380017647.01.T01:intron 30.0%
TTCTGTCACAATTACATTAC+TGG + Chr3:99034866-99034885 MsG0380017647.01.T01:intron 30.0%
! AAAGGTTCCTCTAATTTTGT+AGG - Chr3:99038809-99038828 None:intergenic 30.0%
! AAGGTTCCTCTAATTTTGTA+GGG - Chr3:99038808-99038827 None:intergenic 30.0%
! AGATTGAGATTGTTGTTGTT+CGG - Chr3:99033462-99033481 None:intergenic 30.0%
! ATGTAATTTGCCAAAGTGAT+TGG + Chr3:99035395-99035414 MsG0380017647.01.T01:intron 30.0%
! CACTTTTCCAATGAATAAGT+AGG + Chr3:99034304-99034323 MsG0380017647.01.T01:intron 30.0%
! CAGTTCTTTTCTGAATAAGA+TGG - Chr3:99036132-99036151 None:intergenic 30.0%
! CTGAAATATCTGAACCATTT+TGG - Chr3:99033116-99033135 None:intergenic 30.0%
! CTGTCATTTAAACATACATG+AGG + Chr3:99034270-99034289 MsG0380017647.01.T01:intron 30.0%
! CTTCAATTTAAAGTAACTGC+TGG + Chr3:99038384-99038403 MsG0380017647.01.T01:intron 30.0%
! GTTCTTTTCTGAATAAGATG+GGG - Chr3:99036130-99036149 None:intergenic 30.0%
! TACATTACTGGTTATAAGAG+TGG + Chr3:99034878-99034897 MsG0380017647.01.T01:intron 30.0%
! TCATGGTAAGTACAAACTTT+TGG + Chr3:99038033-99038052 MsG0380017647.01.T01:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + Chr3:99035599-99035618 MsG0380017647.01.T01:intron 30.0%
! TTTAAAATATGCATGACGAC+AGG - Chr3:99034147-99034166 None:intergenic 30.0%
! TTTACCCAAAACCATTTTCT+CGG - Chr3:99036168-99036187 None:intergenic 30.0%
! TTTATTTGGTCACTTTCCAT+AGG + Chr3:99034945-99034964 MsG0380017647.01.T01:intron 30.0%
! TTTTCCAATGAATAAGTAGG+TGG + Chr3:99034307-99034326 MsG0380017647.01.T01:intron 30.0%
!! AAATCTTTGGGACAAAAAGA+TGG + Chr3:99038598-99038617 MsG0380017647.01.T01:intron 30.0%
!! ACTTTGGAATTAGCACAATA+TGG + Chr3:99033749-99033768 MsG0380017647.01.T01:CDS 30.0%
!! AGTTTTATGAATTTGTGCCA+TGG + Chr3:99037217-99037236 MsG0380017647.01.T01:CDS 30.0%
!! CGATGATTAGTTTGAAAGAA+CGG - Chr3:99033424-99033443 None:intergenic 30.0%
!! GTAAGTACAAACTTTTGGAA+GGG + Chr3:99038038-99038057 MsG0380017647.01.T01:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + Chr3:99035600-99035619 MsG0380017647.01.T01:intron 30.0%
!! TTTCATTGATTGGTTTCATC+CGG - Chr3:99038437-99038456 None:intergenic 30.0%
!!! TCTTGTGTAGGATTAGTTTT+GGG + Chr3:99037050-99037069 MsG0380017647.01.T01:intron 30.0%
!!! TGTCCCAAAGATTTAGTTTT+AGG - Chr3:99038592-99038611 None:intergenic 30.0%
AAAGAACGGTTGTGATGAAA+GGG - Chr3:99033410-99033429 None:intergenic 35.0%
AAAGTGTAACGATCAGTCAT+TGG + Chr3:99038951-99038970 MsG0380017647.01.T01:CDS 35.0%
AACAACAACATACTACAAGC+AGG - Chr3:99037975-99037994 None:intergenic 35.0%
AAGAAAAGAACGTGTGATGT+TGG + Chr3:99033188-99033207 MsG0380017647.01.T01:five_prime_UTR 35.0%
AATTAGCACAATATGGACCT+AGG + Chr3:99033756-99033775 MsG0380017647.01.T01:CDS 35.0%
AATTGAGCTACTGAACTGAA+GGG - Chr3:99034221-99034240 None:intergenic 35.0%
ACACTCACTACAAATTAGAG+AGG + Chr3:99034241-99034260 MsG0380017647.01.T01:intron 35.0%
ACAGAGGAAACAGATTATAG+AGG - Chr3:99037944-99037963 None:intergenic 35.0%
ACCATTGACATTTCACACAA+AGG - Chr3:99038827-99038846 None:intergenic 35.0%
ACCTTTGTGTGAAATGTCAA+TGG + Chr3:99038823-99038842 MsG0380017647.01.T01:intron 35.0%
ACTTATTTGAGCTCATATGC+TGG - Chr3:99034637-99034656 None:intergenic 35.0%
ACTTTGGCAAATTACATGAG+TGG - Chr3:99035392-99035411 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr3:99035635-99035654 MsG0380017647.01.T01:intron 35.0%
AGAAGAAGAAGAAGAAACAG+AGG - Chr3:99033360-99033379 None:intergenic 35.0%
ATAAGGAGGATTCAATAGCT+TGG - Chr3:99033318-99033337 None:intergenic 35.0%
ATATTTGCTCATCGGAATCT+GGG - Chr3:99038748-99038767 None:intergenic 35.0%
ATGAAACCTTGATTCCAAAG+GGG - Chr3:99035009-99035028 None:intergenic 35.0%
ATGGTTCAGATATTTCAGGA+TGG + Chr3:99033118-99033137 MsG0380017647.01.T01:intron 35.0%
ATGTGGGAAAGAAGATATGA+CGG + Chr3:99037676-99037695 MsG0380017647.01.T01:intron 35.0%
ATTACATGCCAGTAGAATTG+TGG + Chr3:99035677-99035696 MsG0380017647.01.T01:intron 35.0%
ATTCAATAGCTTGGTTTCCA+TGG - Chr3:99033309-99033328 None:intergenic 35.0%
CAAATCATACTTGGGGTTAT+TGG + Chr3:99037415-99037434 MsG0380017647.01.T01:intron 35.0%
CAAGAATCATCATTCATCCA+TGG + Chr3:99033289-99033308 MsG0380017647.01.T01:exon 35.0%
CACTCACTACAAATTAGAGA+GGG + Chr3:99034242-99034261 MsG0380017647.01.T01:intron 35.0%
CATAGAGTTTATCTGCACAT+CGG + Chr3:99036218-99036237 MsG0380017647.01.T01:intron 35.0%
CTTAAAACATGCTGGAATTC+TGG + Chr3:99037507-99037526 MsG0380017647.01.T01:intron 35.0%
GACATTTGAAAATGCTGCAT+TGG + Chr3:99036588-99036607 MsG0380017647.01.T01:CDS 35.0%
GAGCTTATGAAAACTGTGTA+TGG - Chr3:99034587-99034606 None:intergenic 35.0%
GCTTGTAAAGATACATGCTT+TGG + Chr3:99037638-99037657 MsG0380017647.01.T01:intron 35.0%
GGAAAGTGAATAAGATAAGG+AGG - Chr3:99033332-99033351 None:intergenic 35.0%
GGGATAATATGAATGGTCAA+AGG - Chr3:99038788-99038807 None:intergenic 35.0%
GGTGGACCTTAGTTAATTAT+TGG + Chr3:99038405-99038424 MsG0380017647.01.T01:intron 35.0%
GTAAATGAGTCAGATATTCC+GGG - Chr3:99032930-99032949 None:intergenic 35.0%
GTAGGTCAATTAAATTGGGA+CGG - Chr3:99035448-99035467 None:intergenic 35.0%
GTGTTTAGGTATCACTTTGA+TGG + Chr3:99033611-99033630 MsG0380017647.01.T01:intron 35.0%
TAATAGGAATGGCTAAAGGA+CGG + Chr3:99036708-99036727 MsG0380017647.01.T01:intron 35.0%
TAATTATTGCTAGAGCCATG+TGG + Chr3:99035740-99035759 MsG0380017647.01.T01:intron 35.0%
TAATTGAGCTACTGAACTGA+AGG - Chr3:99034222-99034241 None:intergenic 35.0%
TACATAAAACCTACCTTAGG+AGG - Chr3:99034054-99034073 None:intergenic 35.0%
TATAGTACACGTCCTGTATA+TGG + Chr3:99035168-99035187 MsG0380017647.01.T01:CDS 35.0%
TATGAATTTGTGCCATGGAA+TGG + Chr3:99037222-99037241 MsG0380017647.01.T01:CDS 35.0%
TATTGCATTACTGACACTTC+AGG + Chr3:99036864-99036883 MsG0380017647.01.T01:intron 35.0%
TCCAAAGTTGTCAATTCCTT+GGG - Chr3:99033737-99033756 None:intergenic 35.0%
TCCATGTAAAACTTCTCTCT+TGG + Chr3:99038001-99038020 MsG0380017647.01.T01:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - Chr3:99035466-99035485 None:intergenic 35.0%
TGAATTAGAAGCAACAACAG+AGG + Chr3:99037565-99037584 MsG0380017647.01.T01:intron 35.0%
TGCAGACAATGGAAATTATG+TGG + Chr3:99037290-99037309 MsG0380017647.01.T01:CDS 35.0%
TTAACGTGTGTTTAGTTGGA+GGG + Chr3:99038167-99038186 MsG0380017647.01.T01:intron 35.0%
TTCCAAAGTTGTCAATTCCT+TGG - Chr3:99033738-99033757 None:intergenic 35.0%
TTTCCTTATATTGAGTGTGG+GGG + Chr3:99038345-99038364 MsG0380017647.01.T01:intron 35.0%
! ACCAAGAGAGAAGTTTTACA+TGG - Chr3:99038005-99038024 None:intergenic 35.0%
! CAATTTAAAGTAACTGCTGG+TGG + Chr3:99038387-99038406 MsG0380017647.01.T01:intron 35.0%
! GACAATTAGTTTGGGAAGTA+TGG + Chr3:99035857-99035876 MsG0380017647.01.T01:intron 35.0%
! GGTAAGTACAAACTTTTGGA+AGG + Chr3:99038037-99038056 MsG0380017647.01.T01:intron 35.0%
! GGTGTTTTCATAAGCTATCA+TGG + Chr3:99034521-99034540 MsG0380017647.01.T01:intron 35.0%
! TTACCCAAAACCATTTTCTC+GGG - Chr3:99036167-99036186 None:intergenic 35.0%
!! CAAAAGCTTTGTCTCTTTTC+AGG - Chr3:99033683-99033702 None:intergenic 35.0%
!!! CTCTTGTGTAGGATTAGTTT+TGG + Chr3:99037049-99037068 MsG0380017647.01.T01:intron 35.0%
!!! TGTTGCTTTTCCTCGTTTTA+TGG + Chr3:99036333-99036352 MsG0380017647.01.T01:intron 35.0%
!!! TTCCTGTTTTTGAACCACAT+TGG + Chr3:99035244-99035263 MsG0380017647.01.T01:CDS 35.0%
AAAGATAGTTACCCGCTATG+AGG - Chr3:99033533-99033552 None:intergenic 40.0%
AAATCCCCACACGTTTGAAA+GGG - Chr3:99038292-99038311 None:intergenic 40.0%
AAATTCGAAACCTCCGAACA+AGG + Chr3:99034023-99034042 MsG0380017647.01.T01:CDS 40.0%
AACAACATACTACAAGCAGG+TGG - Chr3:99037972-99037991 None:intergenic 40.0%
AACATATGGTCAACAGAGTC+TGG + Chr3:99038981-99039000 MsG0380017647.01.T01:CDS 40.0%
AACGAGGAAAAGCAACATTC+TGG - Chr3:99036330-99036349 None:intergenic 40.0%
AAGAACGGTTGTGATGAAAG+GGG - Chr3:99033409-99033428 None:intergenic 40.0%
AAGATAGTTACCCGCTATGA+GGG - Chr3:99033532-99033551 None:intergenic 40.0%
AAGTAGCTACTTGGGGTTAT+TGG + Chr3:99037259-99037278 MsG0380017647.01.T01:CDS 40.0%
AATAAGTAGGTGGTGAGTGT+TGG + Chr3:99034317-99034336 MsG0380017647.01.T01:intron 40.0%
AATAGGAATGGCTAAAGGAC+GGG + Chr3:99036709-99036728 MsG0380017647.01.T01:intron 40.0%
AATTTGTCTCAATCCACCAG+CGG - Chr3:99036554-99036573 None:intergenic 40.0%
ACCACATTGGCAAATATGCA+TGG + Chr3:99035257-99035276 MsG0380017647.01.T01:CDS 40.0%
AGAAGAAGAAGAAACAGAGG+AGG - Chr3:99033357-99033376 None:intergenic 40.0%
AGGTAGGAATGAACTGATGT+TGG + Chr3:99033978-99033997 MsG0380017647.01.T01:intron 40.0%
AGTCAATCCAAATAGGTCCT+AGG + Chr3:99034654-99034673 MsG0380017647.01.T01:intron 40.0%
AGTCGTTGACACTCTTTCAA+GGG + Chr3:99034786-99034805 MsG0380017647.01.T01:intron 40.0%
ATAAGTAGGTGGTGAGTGTT+GGG + Chr3:99034318-99034337 MsG0380017647.01.T01:intron 40.0%
ATGTAGTGACCAACAGAAGA+AGG - Chr3:99037084-99037103 None:intergenic 40.0%
CAAGGTTTCATTTGCGATGA+TGG + Chr3:99035018-99035037 MsG0380017647.01.T01:CDS 40.0%
CAATATGGACCTAGGTTTAC+TGG + Chr3:99033764-99033783 MsG0380017647.01.T01:CDS 40.0%
CACTCTGCATATTTGCTCAT+CGG - Chr3:99038756-99038775 None:intergenic 40.0%
CAGATTGGAATTCACTATGG+TGG + Chr3:99037192-99037211 MsG0380017647.01.T01:intron 40.0%
CATATTTGCTCATCGGAATC+TGG - Chr3:99038749-99038768 None:intergenic 40.0%
CCATGGTTTAACACTTGGAA+GGG + Chr3:99037858-99037877 MsG0380017647.01.T01:CDS 40.0%
CGTCATTTAAGCATACCTTG+GGG + Chr3:99034351-99034370 MsG0380017647.01.T01:intron 40.0%
CTCACCACCTACTTATTCAT+TGG - Chr3:99034314-99034333 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr3:99035636-99035655 MsG0380017647.01.T01:intron 40.0%
GAAAGAACGGTTGTGATGAA+AGG - Chr3:99033411-99033430 None:intergenic 40.0%
GATGAGCAAATATGCAGAGT+GGG + Chr3:99038755-99038774 MsG0380017647.01.T01:intron 40.0%
GCATCAAAGTTACTACACAG+CGG + Chr3:99032890-99032909 MsG0380017647.01.T01:five_prime_UTR 40.0%
GCGTCATTTAAGCATACCTT+GGG + Chr3:99034350-99034369 MsG0380017647.01.T01:intron 40.0%
GGTAGGAATGAACTGATGTT+GGG + Chr3:99033979-99033998 MsG0380017647.01.T01:intron 40.0%
GTAACGATCAGTCATTGGAA+GGG + Chr3:99038956-99038975 MsG0380017647.01.T01:CDS 40.0%
GTCAATTAAATTGGGACGGA+GGG - Chr3:99035444-99035463 None:intergenic 40.0%
GTCATTTAAGCATACCTTGG+GGG + Chr3:99034352-99034371 MsG0380017647.01.T01:intron 40.0%
GTCCAATACCACAATTCTAC+TGG - Chr3:99035688-99035707 None:intergenic 40.0%
GTCTATTTGCCTTCTTCTGT+TGG + Chr3:99037072-99037091 MsG0380017647.01.T01:intron 40.0%
GTCTCATATTCATTTCTCGC+CGG + Chr3:99035916-99035935 MsG0380017647.01.T01:intron 40.0%
GTTAACACCTAGGACCTATT+TGG - Chr3:99034664-99034683 None:intergenic 40.0%
GTTAACGTGTGTTTAGTTGG+AGG + Chr3:99038166-99038185 MsG0380017647.01.T01:intron 40.0%
GTTCAGATATTTCAGGATGG+AGG + Chr3:99033121-99033140 MsG0380017647.01.T01:intron 40.0%
TAACAGGGAAGTTAACACCT+AGG - Chr3:99034674-99034693 None:intergenic 40.0%
TAACGATCAGTCATTGGAAG+GGG + Chr3:99038957-99038976 MsG0380017647.01.T01:CDS 40.0%
TAACGTGTGTTTAGTTGGAG+GGG + Chr3:99038168-99038187 MsG0380017647.01.T01:intron 40.0%
TACACGTCCTGTATATGGTT+GGG + Chr3:99035173-99035192 MsG0380017647.01.T01:CDS 40.0%
TAGTCGTTGACACTCTTTCA+AGG + Chr3:99034785-99034804 MsG0380017647.01.T01:intron 40.0%
TATATGGTTGGGGTGATGTT+GGG + Chr3:99035184-99035203 MsG0380017647.01.T01:CDS 40.0%
TATCTCCCTTTCAAACGTGT+GGG + Chr3:99038284-99038303 MsG0380017647.01.T01:intron 40.0%
TATTCAGAAAAGAACTGGGG+TGG + Chr3:99036135-99036154 MsG0380017647.01.T01:CDS 40.0%
TATTTGCTCATCGGAATCTG+GGG - Chr3:99038747-99038766 None:intergenic 40.0%
TCAAATGTCTCAGTTAGTCC+CGG - Chr3:99036577-99036596 None:intergenic 40.0%
TCATTGGAAGGGGAAACATA+TGG + Chr3:99038967-99038986 MsG0380017647.01.T01:CDS 40.0%
TCCCAAGGAATTGACAACTT+TGG + Chr3:99033733-99033752 MsG0380017647.01.T01:CDS 40.0%
TCCCCAATCACACAATTTCT+GGG + Chr3:99033838-99033857 MsG0380017647.01.T01:CDS 40.0%
TCCCCAGAAATTGTGTGATT+GGG - Chr3:99033843-99033862 None:intergenic 40.0%
TCTCTTGGTACAGAGTTTCA+TGG + Chr3:99038016-99038035 MsG0380017647.01.T01:intron 40.0%
TGCCAATGTGGTTCAAAAAC+AGG - Chr3:99035249-99035268 None:intergenic 40.0%
TGCCAGTAGAATTGTGGTAT+TGG + Chr3:99035683-99035702 MsG0380017647.01.T01:intron 40.0%
TGCGTCATTTAAGCATACCT+TGG + Chr3:99034349-99034368 MsG0380017647.01.T01:intron 40.0%
TGGTTTATGTCTGCAGACAA+TGG + Chr3:99037279-99037298 MsG0380017647.01.T01:CDS 40.0%
TGTAACGATCAGTCATTGGA+AGG + Chr3:99038955-99038974 MsG0380017647.01.T01:CDS 40.0%
TGTTGCAAATTAGCGCAGAT+TGG + Chr3:99037177-99037196 MsG0380017647.01.T01:intron 40.0%
TTATCTCCCTTTCAAACGTG+TGG + Chr3:99038283-99038302 MsG0380017647.01.T01:intron 40.0%
TTCCCCAGAAATTGTGTGAT+TGG - Chr3:99033844-99033863 None:intergenic 40.0%
TTCCTTATATTGAGTGTGGG+GGG + Chr3:99038346-99038365 MsG0380017647.01.T01:intron 40.0%
TTGGGACAAAAAGATGGAGA+GGG + Chr3:99038604-99038623 MsG0380017647.01.T01:intron 40.0%
! AGTGGCTTAGTTCGTCTTTT+TGG + Chr3:99038213-99038232 MsG0380017647.01.T01:intron 40.0%
! GATGTTGGGTAACACTTTTG+CGG + Chr3:99033993-99034012 MsG0380017647.01.T01:CDS 40.0%
! GCTCAGTGTAATGTTTTCGA+AGG + Chr3:99036502-99036521 MsG0380017647.01.T01:CDS 40.0%
! GCTGCATTGGTAACTTCATA+TGG + Chr3:99036601-99036620 MsG0380017647.01.T01:intron 40.0%
! GCTTAGTTCGTCTTTTTGGA+GGG + Chr3:99038217-99038236 MsG0380017647.01.T01:intron 40.0%
! GTGTTTTCCCTTCCATTGAT+TGG - Chr3:99039007-99039026 None:intergenic 40.0%
! GTTCCCGAGAAAATGGTTTT+GGG + Chr3:99036161-99036180 MsG0380017647.01.T01:CDS 40.0%
! TAGTTTGGGAAGTATGGTGT+TGG + Chr3:99035863-99035882 MsG0380017647.01.T01:intron 40.0%
! TGTAGGAGAGTAAATGGGTT+TGG - Chr3:99033486-99033505 None:intergenic 40.0%
! TGTGTGATTGGGGAGTATAT+TGG - Chr3:99033832-99033851 None:intergenic 40.0%
! TTGTATCTCACATAGTGGAG+TGG + Chr3:99036466-99036485 MsG0380017647.01.T01:intron 40.0%
! TTTAAGAGGAGCACATTCCA+AGG - Chr3:99035896-99035915 None:intergenic 40.0%
! TTTGGGACAAAAAGATGGAG+AGG + Chr3:99038603-99038622 MsG0380017647.01.T01:intron 40.0%
!! AATCTCAGGTTGGATAGAGT+GGG + Chr3:99036077-99036096 MsG0380017647.01.T01:intron 40.0%
!! ATGGAATGGTGTTGTAAGCT+GGG + Chr3:99037236-99037255 MsG0380017647.01.T01:CDS 40.0%
!! CTTAGTTCGTCTTTTTGGAG+GGG + Chr3:99038218-99038237 MsG0380017647.01.T01:intron 40.0%
!! GCTTTGTCTCTTTTCAGGAA+TGG - Chr3:99033678-99033697 None:intergenic 40.0%
!! GTTTCATTTGCGATGATGGA+AGG + Chr3:99035022-99035041 MsG0380017647.01.T01:CDS 40.0%
!! TGGTGGATTGAGACAAATTC+CGG + Chr3:99036555-99036574 MsG0380017647.01.T01:CDS 40.0%
!! TTATCTGCACATCGGTTTCA+TGG + Chr3:99036226-99036245 MsG0380017647.01.T01:intron 40.0%
!!! AATGTTTTCGAAGGTGCTAG+TGG + Chr3:99036511-99036530 MsG0380017647.01.T01:CDS 40.0%
AAAAGATGGAGAGGGAATGC+AGG + Chr3:99038612-99038631 MsG0380017647.01.T01:intron 45.0%
AAACAGTAAAGACTGCTCGC+TGG + Chr3:99035142-99035161 MsG0380017647.01.T01:CDS 45.0%
AACAGAGTCTGGCCAATCAA+TGG + Chr3:99038992-99039011 MsG0380017647.01.T01:CDS 45.0%
AACAGTAAAGACTGCTCGCT+GGG + Chr3:99035143-99035162 MsG0380017647.01.T01:CDS 45.0%
AACTGCACGCAAATTCTTCG+AGG + Chr3:99033634-99033653 MsG0380017647.01.T01:CDS 45.0%
AAGAAGATATGACGGCAGCA+AGG + Chr3:99037684-99037703 MsG0380017647.01.T01:intron 45.0%
AAGCTGGGAAGTAGCTACTT+GGG + Chr3:99037251-99037270 MsG0380017647.01.T01:CDS 45.0%
ACACGTCCTGTATATGGTTG+GGG + Chr3:99035174-99035193 MsG0380017647.01.T01:CDS 45.0%
ACATCACCCCAACCATATAC+AGG - Chr3:99035183-99035202 None:intergenic 45.0%
ACATTCTCATGAGGGGAAGT+TGG + Chr3:99038698-99038717 MsG0380017647.01.T01:intron 45.0%
ACTCTCGCACATTCTCATGA+GGG + Chr3:99038690-99038709 MsG0380017647.01.T01:intron 45.0%
ACTGCACGCAAATTCTTCGA+GGG + Chr3:99033635-99033654 MsG0380017647.01.T01:CDS 45.0%
AGAAGATATGACGGCAGCAA+GGG + Chr3:99037685-99037704 MsG0380017647.01.T01:intron 45.0%
AGATAGTTACCCGCTATGAG+GGG - Chr3:99033531-99033550 None:intergenic 45.0%
AGCAAAGATGCAGCAGTAAC+AGG - Chr3:99034690-99034709 None:intergenic 45.0%
AGTCTGGCCAATCAATGGAA+GGG + Chr3:99038997-99039016 MsG0380017647.01.T01:CDS 45.0%
ATAGGAATGGCTAAAGGACG+GGG + Chr3:99036710-99036729 MsG0380017647.01.T01:intron 45.0%
ATCTCCCTTTCAAACGTGTG+GGG + Chr3:99038285-99038304 MsG0380017647.01.T01:intron 45.0%
ATGAGTCAGATATTCCGGGA+CGG - Chr3:99032926-99032945 None:intergenic 45.0%
ATTGGACGTGACAAGTGACA+TGG + Chr3:99037812-99037831 MsG0380017647.01.T01:CDS 45.0%
CAAATCCCCACACGTTTGAA+AGG - Chr3:99038293-99038312 None:intergenic 45.0%
CAAGCAGGTGGTTTAAACAG+AGG - Chr3:99037960-99037979 None:intergenic 45.0%
CAGCTTACAACACCATTCCA+TGG - Chr3:99037237-99037256 None:intergenic 45.0%
CATTCTCATGAGGGGAAGTT+GGG + Chr3:99038699-99038718 MsG0380017647.01.T01:intron 45.0%
CATTGGCAAATATGCATGGC+CGG + Chr3:99035261-99035280 MsG0380017647.01.T01:CDS 45.0%
CCCCAATCACACAATTTCTG+GGG + Chr3:99033839-99033858 MsG0380017647.01.T01:CDS 45.0%
CCCCAGAAATTGTGTGATTG+GGG - Chr3:99033842-99033861 None:intergenic 45.0%
CCCTTCCAAGTGTTAAACCA+TGG - Chr3:99037861-99037880 None:intergenic 45.0%
CGATGAGCAAATATGCAGAG+TGG + Chr3:99038754-99038773 MsG0380017647.01.T01:intron 45.0%
CTACCGGTAATCCAATAGCA+CGG - Chr3:99037911-99037930 None:intergenic 45.0%
CTCCCCAATCACACAATTTC+TGG + Chr3:99033837-99033856 MsG0380017647.01.T01:CDS 45.0%
CTTTCAAACGTGTGGGGATT+TGG + Chr3:99038291-99038310 MsG0380017647.01.T01:intron 45.0%
GAAGAAGAAAATGACCCCCA+AGG - Chr3:99034369-99034388 None:intergenic 45.0%
GAAGAAGAAACAGAGGAGGA+AGG - Chr3:99033353-99033372 None:intergenic 45.0%
GAAGCAACAACAGAGGATCA+AGG + Chr3:99037572-99037591 MsG0380017647.01.T01:intron 45.0%
GACCTAGGTTTACTGGTGTT+GGG + Chr3:99033771-99033790 MsG0380017647.01.T01:CDS 45.0%
GAGAACGAGAGAATGTGAGT+TGG + Chr3:99038876-99038895 MsG0380017647.01.T01:intron 45.0%
GCAAAGATGCAGCAGTAACA+GGG - Chr3:99034689-99034708 None:intergenic 45.0%
GCCATGCATATTTGCCAATG+TGG - Chr3:99035261-99035280 None:intergenic 45.0%
GCCATGGTTTAACACTTGGA+AGG + Chr3:99037857-99037876 MsG0380017647.01.T01:CDS 45.0%
GCGCAGATTGGAATTCACTA+TGG + Chr3:99037189-99037208 MsG0380017647.01.T01:intron 45.0%
GGATTACCGGTAGATGTAGA+TGG + Chr3:99037918-99037937 MsG0380017647.01.T01:CDS 45.0%
GGTCAATTAAATTGGGACGG+AGG - Chr3:99035445-99035464 None:intergenic 45.0%
GTACACGTCCTGTATATGGT+TGG + Chr3:99035172-99035191 MsG0380017647.01.T01:CDS 45.0%
GTATATGGTTGGGGTGATGT+TGG + Chr3:99035183-99035202 MsG0380017647.01.T01:CDS 45.0%
TAAGCTGGGAAGTAGCTACT+TGG + Chr3:99037250-99037269 MsG0380017647.01.T01:CDS 45.0%
TACTCTCGCACATTCTCATG+AGG + Chr3:99038689-99038708 MsG0380017647.01.T01:intron 45.0%
TAGAGGCCATCTACATCTAC+CGG - Chr3:99037927-99037946 None:intergenic 45.0%
TATTGTCGAGTGGCTCAAGT+AGG + Chr3:99036940-99036959 MsG0380017647.01.T01:intron 45.0%
TCAAAATGTGGACGATGGCT+TGG - Chr3:99039055-99039074 None:intergenic 45.0%
TCTACACAGAAGTCAACTGC+TGG + Chr3:99035207-99035226 MsG0380017647.01.T01:CDS 45.0%
TGCAACACTCATCGAAACAC+TGG - Chr3:99036430-99036449 None:intergenic 45.0%
TGGCTAGATGCCAATCACTT+TGG - Chr3:99035408-99035427 None:intergenic 45.0%
TTAGGAGGAACCTCCTTGTT+CGG - Chr3:99034039-99034058 None:intergenic 45.0%
! ACCTAGGTTTACTGGTGTTG+GGG + Chr3:99033772-99033791 MsG0380017647.01.T01:CDS 45.0%
! CGTTCCCGAGAAAATGGTTT+TGG + Chr3:99036160-99036179 MsG0380017647.01.T01:CDS 45.0%
! CTGGAATTCTGGCTAATGAC+AGG + Chr3:99037518-99037537 MsG0380017647.01.T01:intron 45.0%
! GGAGGTGTAGGAGAGTAAAT+GGG - Chr3:99033491-99033510 None:intergenic 45.0%
! GGCTTAGTTCGTCTTTTTGG+AGG + Chr3:99038216-99038235 MsG0380017647.01.T01:intron 45.0%
! TAGCCGTGCTATTGGATTAC+CGG + Chr3:99037905-99037924 MsG0380017647.01.T01:CDS 45.0%
! TTTCTCGCCGGTGTCAATTT+CGG + Chr3:99035928-99035947 MsG0380017647.01.T01:intron 45.0%
!! ACAAGGTGTTGCTCTTGTGT+AGG + Chr3:99037038-99037057 MsG0380017647.01.T01:intron 45.0%
!! CATGGAATGGTGTTGTAAGC+TGG + Chr3:99037235-99037254 MsG0380017647.01.T01:CDS 45.0%
!! GAATCTCAGGTTGGATAGAG+TGG + Chr3:99036076-99036095 MsG0380017647.01.T01:intron 45.0%
!! GGTGGATTGAGACAAATTCC+GGG + Chr3:99036556-99036575 MsG0380017647.01.T01:CDS 45.0%
!! TCAATTTCGGTGGGCTAGTT+TGG + Chr3:99035941-99035960 MsG0380017647.01.T01:intron 45.0%
!!! GTTTTCAAGTCACTCCCCTT+TGG + Chr3:99034992-99035011 MsG0380017647.01.T01:CDS 45.0%
!! AAAAAAAATGTATAAATATA+GGG - Chr3:99033078-99033097 None:intergenic 5.0%
!! TAAAAAAAATGTATAAATAT+AGG - Chr3:99033079-99033098 None:intergenic 5.0%
AAACGTGTGGGGATTTGGAG+GGG + Chr3:99038296-99038315 MsG0380017647.01.T01:intron 50.0%
AAAGGGGAAGAATGTGCGTG+TGG - Chr3:99033393-99033412 None:intergenic 50.0%
AAGCACATCCTCAGAAGGAG+AGG + Chr3:99038650-99038669 MsG0380017647.01.T01:intron 50.0%
AAGGAGGTTCCTCCTAAGGT+AGG + Chr3:99034042-99034061 MsG0380017647.01.T01:intron 50.0%
ACATCCTCAGAAGGAGAGGA+CGG + Chr3:99038654-99038673 MsG0380017647.01.T01:intron 50.0%
AGCTGGGAAGTAGCTACTTG+GGG + Chr3:99037252-99037271 MsG0380017647.01.T01:CDS 50.0%
ATAGCACGGCTAAGAACAGG+TGG - Chr3:99037897-99037916 None:intergenic 50.0%
ATATGACGGCAGCAAGGGAA+AGG + Chr3:99037690-99037709 MsG0380017647.01.T01:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr3:99035640-99035659 MsG0380017647.01.T01:intron 50.0%
CAAACGTGTGGGGATTTGGA+GGG + Chr3:99038295-99038314 MsG0380017647.01.T01:intron 50.0%
CACGCAAATTCTTCGAGGGT+TGG + Chr3:99033639-99033658 MsG0380017647.01.T01:CDS 50.0%
CCAATAGCACGGCTAAGAAC+AGG - Chr3:99037900-99037919 None:intergenic 50.0%
CCATGTGGTGAGTCAGGAAT+AGG + Chr3:99035755-99035774 MsG0380017647.01.T01:intron 50.0%
CCTATTCCTGACTCACCACA+TGG - Chr3:99035758-99035777 None:intergenic 50.0%
CCTGTTCTTAGCCGTGCTAT+TGG + Chr3:99037897-99037916 MsG0380017647.01.T01:CDS 50.0%
CGGAGGGAGTAGATATCAAG+TGG - Chr3:99035428-99035447 None:intergenic 50.0%
CTCCCCCCACACTCAATATA+AGG - Chr3:99038351-99038370 None:intergenic 50.0%
CTCTCGCACATTCTCATGAG+GGG + Chr3:99038691-99038710 MsG0380017647.01.T01:intron 50.0%
GAAAGGCCAGCTTCTGATGT+TGG - Chr3:99037614-99037633 None:intergenic 50.0%
GAAATTGCACTTACAGCCGC+TGG + Chr3:99036535-99036554 MsG0380017647.01.T01:CDS 50.0%
GAACAAGGAGGTTCCTCCTA+AGG + Chr3:99034038-99034057 MsG0380017647.01.T01:CDS 50.0%
GACAGCACATACCTGTTGAC+AGG - Chr3:99035290-99035309 None:intergenic 50.0%
GAGGGCCATGGTTTAACACT+TGG + Chr3:99037853-99037872 MsG0380017647.01.T01:CDS 50.0%
GAGTCTGGCCAATCAATGGA+AGG + Chr3:99038996-99039015 MsG0380017647.01.T01:CDS 50.0%
GGACCTAGGTTTACTGGTGT+TGG + Chr3:99033770-99033789 MsG0380017647.01.T01:CDS 50.0%
GTCAATTCCTTGGGAAACGC+AGG - Chr3:99033728-99033747 None:intergenic 50.0%
GTGTGTTTAGTTGGAGGGGA+GGG + Chr3:99038172-99038191 MsG0380017647.01.T01:intron 50.0%
TAGCCCACCGAAATTGACAC+CGG - Chr3:99035938-99035957 None:intergenic 50.0%
TCAAACGTGTGGGGATTTGG+AGG + Chr3:99038294-99038313 MsG0380017647.01.T01:intron 50.0%
TCCTCAAGCACATCCTCAGA+AGG + Chr3:99038645-99038664 MsG0380017647.01.T01:intron 50.0%
TGAGAATCCTGCGTTTCCCA+AGG + Chr3:99033718-99033737 MsG0380017647.01.T01:CDS 50.0%
TTCGAAACCTCCGAACAAGG+AGG + Chr3:99034026-99034045 MsG0380017647.01.T01:CDS 50.0%
! AGTTGACGATTGGGAGGTGT+AGG - Chr3:99033503-99033522 None:intergenic 50.0%
! ATTTTGTACTCCCTCCGTCC+CGG - Chr3:99035657-99035676 None:intergenic 50.0%
! GGGAGGTGTAGGAGAGTAAA+TGG - Chr3:99033492-99033511 None:intergenic 50.0%
! GGTGTTGGGGCACAAATTCT+TGG + Chr3:99033785-99033804 MsG0380017647.01.T01:CDS 50.0%
! TCCTTCTGAGGATGTGCTTG+AGG - Chr3:99038649-99038668 None:intergenic 50.0%
!! AGTTCGTCTTTTTGGAGGGG+AGG + Chr3:99038221-99038240 MsG0380017647.01.T01:intron 50.0%
!! ATGGCAGCTCTAGAAGTTGG+AGG + Chr3:99037831-99037850 MsG0380017647.01.T01:CDS 50.0%
!! CAGCTCTAGAAGTTGGAGGA+GGG + Chr3:99037835-99037854 MsG0380017647.01.T01:CDS 50.0%
!! GACATGGCAGCTCTAGAAGT+TGG + Chr3:99037828-99037847 MsG0380017647.01.T01:CDS 50.0%
!! GGAAGTATGGTGTTGGCTTG+GGG + Chr3:99035870-99035889 MsG0380017647.01.T01:intron 50.0%
!! GGGAAGTATGGTGTTGGCTT+GGG + Chr3:99035869-99035888 MsG0380017647.01.T01:intron 50.0%
!! GTCACTCCCCTTTGGAATCA+AGG + Chr3:99035000-99035019 MsG0380017647.01.T01:CDS 50.0%
!! GTTCGTCTTTTTGGAGGGGA+GGG + Chr3:99038222-99038241 MsG0380017647.01.T01:intron 50.0%
!! TCAGGTTGGATAGAGTGGGA+TGG + Chr3:99036081-99036100 MsG0380017647.01.T01:intron 50.0%
!! TCTTTTTGGAGGGGAGGGAA+AGG + Chr3:99038227-99038246 MsG0380017647.01.T01:intron 50.0%
!! TGGGAAGTATGGTGTTGGCT+TGG + Chr3:99035868-99035887 MsG0380017647.01.T01:intron 50.0%
AACTTCGCACCCCTCATAGC+GGG + Chr3:99033519-99033538 MsG0380017647.01.T01:CDS 55.0%
ATTGCACTTACAGCCGCTGG+TGG + Chr3:99036538-99036557 MsG0380017647.01.T01:CDS 55.0%
CAACTTCGCACCCCTCATAG+CGG + Chr3:99033518-99033537 MsG0380017647.01.T01:CDS 55.0%
CACAGAAGTCAACTGCTGGC+TGG + Chr3:99035211-99035230 MsG0380017647.01.T01:CDS 55.0%
CATACCTGTTGACAGGCCAC+CGG - Chr3:99035283-99035302 None:intergenic 55.0%
CATCCTCAGAAGGAGAGGAC+GGG + Chr3:99038655-99038674 MsG0380017647.01.T01:intron 55.0%
CGTGCTCCAACATCAGAAGC+TGG + Chr3:99037605-99037624 MsG0380017647.01.T01:intron 55.0%
CGTGTGTTTAGTTGGAGGGG+AGG + Chr3:99038171-99038190 MsG0380017647.01.T01:intron 55.0%
CTAGAGCCATGTGGTGAGTC+AGG + Chr3:99035749-99035768 MsG0380017647.01.T01:intron 55.0%
GATGGAGAGGGAATGCAGGA+AGG + Chr3:99038616-99038635 MsG0380017647.01.T01:intron 55.0%
GCCCCAACACCAGTAAACCT+AGG - Chr3:99033776-99033795 None:intergenic 55.0%
GGGGTGCGAAGTTGACGATT+GGG - Chr3:99033512-99033531 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+AGG - Chr3:99032922-99032941 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr3:99035644-99035663 MsG0380017647.01.T01:intron 55.0%
GTGCGAAGTTGACGATTGGG+AGG - Chr3:99033509-99033528 None:intergenic 55.0%
GTGGAGTGGATGTCTCATGC+AGG + Chr3:99036480-99036499 MsG0380017647.01.T01:intron 55.0%
TAGAAGTTGGAGGAGGGCCA+TGG + Chr3:99037841-99037860 MsG0380017647.01.T01:CDS 55.0%
TCAGAAGGAGAGGACGGGAA+AGG + Chr3:99038660-99038679 MsG0380017647.01.T01:intron 55.0%
TGGCAAATATGCATGGCCGG+TGG + Chr3:99035264-99035283 MsG0380017647.01.T01:CDS 55.0%
TTTCCCGTCCTCTCCTTCTG+AGG - Chr3:99038661-99038680 None:intergenic 55.0%
! AGGGGTGCGAAGTTGACGAT+TGG - Chr3:99033513-99033532 None:intergenic 55.0%
! GTGGAGCGTTCCCGAGAAAA+TGG + Chr3:99036154-99036173 MsG0380017647.01.T01:CDS 55.0%
! TCGCCGGTGTCAATTTCGGT+GGG + Chr3:99035932-99035951 MsG0380017647.01.T01:intron 55.0%
!! GCAGCTCTAGAAGTTGGAGG+AGG + Chr3:99037834-99037853 MsG0380017647.01.T01:CDS 55.0%
!! GGACGATGGCTTGGTCATCA+AGG - Chr3:99039046-99039065 None:intergenic 55.0%
GCGGTATACTCCTTCCGTCC+CGG + Chr3:99032909-99032928 MsG0380017647.01.T01:intron 60.0%
GGAGGAACCTCCTTGTTCGG+AGG - Chr3:99034036-99034055 None:intergenic 60.0%
GGATAGAGTGGGATGGCGAG+AGG + Chr3:99036088-99036107 MsG0380017647.01.T01:CDS 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr3:99035643-99035662 MsG0380017647.01.T01:intron 60.0%
! AGGGGAGGGAAAGGTACGTG+GGG + Chr3:99038236-99038255 MsG0380017647.01.T01:intron 60.0%
! CTCGCCGGTGTCAATTTCGG+TGG + Chr3:99035931-99035950 MsG0380017647.01.T01:intron 60.0%
! GAGGGGAGGGAAAGGTACGT+GGG + Chr3:99038235-99038254 MsG0380017647.01.T01:intron 60.0%
!! ATGGTGTTGGCTTGGGGCCT+TGG + Chr3:99035876-99035895 MsG0380017647.01.T01:intron 60.0%
ATGGCCGGTGGCCTGTCAAC+AGG + Chr3:99035276-99035295 MsG0380017647.01.T01:CDS 65.0%
! GGAGGGGAGGGAAAGGTACG+TGG + Chr3:99038234-99038253 MsG0380017647.01.T01:intron 65.0%
! GGGGAGGGAAAGGTACGTGG+GGG + Chr3:99038237-99038256 MsG0380017647.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 99032888 99039074 99032888 ID=MsG0380017647.01;Name=MsG0380017647.01
Chr3 mRNA 99032888 99039074 99032888 ID=MsG0380017647.01.T01;Parent=MsG0380017647.01;Name=MsG0380017647.01.T01;_AED=0.39;_eAED=0.39;_QI=189|0.8|0.72|0.90|0.8|0.72|11|0|489
Chr3 exon 99032888 99032911 99032888 ID=MsG0380017647.01.T01:exon:2103;Parent=MsG0380017647.01.T01
Chr3 exon 99033143 99033540 99033143 ID=MsG0380017647.01.T01:exon:2104;Parent=MsG0380017647.01.T01
Chr3 exon 99033619 99033863 99033619 ID=MsG0380017647.01.T01:exon:2105;Parent=MsG0380017647.01.T01
Chr3 exon 99033980 99034059 99033980 ID=MsG0380017647.01.T01:exon:2106;Parent=MsG0380017647.01.T01
Chr3 exon 99034967 99035043 99034967 ID=MsG0380017647.01.T01:exon:2107;Parent=MsG0380017647.01.T01
Chr3 exon 99035128 99035297 99035128 ID=MsG0380017647.01.T01:exon:2108;Parent=MsG0380017647.01.T01
Chr3 exon 99036085 99036182 99036085 ID=MsG0380017647.01.T01:exon:2109;Parent=MsG0380017647.01.T01
Chr3 exon 99036502 99036609 99036502 ID=MsG0380017647.01.T01:exon:2110;Parent=MsG0380017647.01.T01
Chr3 exon 99037195 99037338 99037195 ID=MsG0380017647.01.T01:exon:2111;Parent=MsG0380017647.01.T01
Chr3 exon 99037807 99037981 99037807 ID=MsG0380017647.01.T01:exon:2112;Parent=MsG0380017647.01.T01
Chr3 exon 99038935 99039074 99038935 ID=MsG0380017647.01.T01:exon:2113;Parent=MsG0380017647.01.T01
Chr3 five_prime_UTR 99032888 99032911 99032888 ID=MsG0380017647.01.T01:five_prime_utr;Parent=MsG0380017647.01.T01
Chr3 five_prime_UTR 99033143 99033307 99033143 ID=MsG0380017647.01.T01:five_prime_utr;Parent=MsG0380017647.01.T01
Chr3 CDS 99033308 99033540 99033308 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99033619 99033863 99033619 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99033980 99034059 99033980 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99034967 99035043 99034967 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99035128 99035297 99035128 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99036085 99036182 99036085 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99036502 99036609 99036502 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99037195 99037338 99037195 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99037807 99037981 99037807 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Chr3 CDS 99038935 99039074 99038935 ID=MsG0380017647.01.T01:cds;Parent=MsG0380017647.01.T01
Gene Sequence

>MsG0380017647.01.T01

ATGGAAACCAAGCTATTGAATCCTCCTTATCTTATTCACTTTCCTTCCTCCTCTGTTTCTTCTTCTTCTTCTTCTTCTTTATCCACACGCACATTCTTCCCCTTTCATCACAACCGTTCTTTCAAACTAATCATCGCTCACAATTCACATACCGAACAACAACAATCTCAATCTTCCAAACCCATTTACTCTCCTACACCTCCCAATCGTCAACTTCGCACCCCTCATAGCGGGTATCACTTTGATGGAACTGCACGCAAATTCTTCGAGGGTTGGTACTTCAAAGTTTCCATTCCTGAAAAGAGACAAAGCTTTTGCTTTATGTATTCTGTTGAGAATCCTGCGTTTCCCAAGGAATTGACAACTTTGGAATTAGCACAATATGGACCTAGGTTTACTGGTGTTGGGGCACAAATTCTTGGTGCTGATGATAAATACATTTGCCAATATACTCCCCAATCACACAATTTCTGGGGAAGTAGGAATGAACTGATGTTGGGTAACACTTTTGCGGCTAAGCAAAATTCGAAACCTCCGAACAAGGAGGTTCCTCCTAAGGAATTTAATGATAAAGTGTTCGAAGGTTTTCAAGTCACTCCCCTTTGGAATCAAGGTTTCATTTGCGATGATGGAAGGTCGGATTATGTAGAAACAGTAAAGACTGCTCGCTGGGAGTATAGTACACGTCCTGTATATGGTTGGGGTGATGTTGGGTCTACACAGAAGTCAACTGCTGGCTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCCGGTGGCCTGTCAACAGGTTGGATAGAGTGGGATGGCGAGAGGATTGAGTTTGAAAATGCCCCATCTTATTCAGAAAAGAACTGGGGTGGAGCGTTCCCGAGAAAATGGTTTTGGGCTCAGTGTAATGTTTTCGAAGGTGCTAGTGGAGAAATTGCACTTACAGCCGCTGGTGGATTGAGACAAATTCCGGGACTAACTGAGACATTTGAAAATGCTGCATTGATTGGAATTCACTATGGTGGAAAGTTTTATGAATTTGTGCCATGGAATGGTGTTGTAAGCTGGGAAGTAGCTACTTGGGGTTATTGGTTTATGTCTGCAGACAATGGAAATTATGTGGTAAATATTTCTCTCCAATTACATTATATAATATTGGACGTGACAAGTGACATGGCAGCTCTAGAAGTTGGAGGAGGGCCATGGTTTAACACTTGGAAGGGAAAAACATCAACTCCACCTGTTCTTAGCCGTGCTATTGGATTACCGGTAGATGTAGATGGCCTCTATAATCTGTTTCCTCTGTTTAAACCACCTGCTTGTAGGGGAAATGTTGTCATAAAGTGTAACGATCAGTCATTGGAAGGGGAAACATATGGTCAACAGAGTCTGGCCAATCAATGGAAGGGAAAACACATGTTAAATGAATCAGCCTTGATGACCAAGCCATCGTCCACATTTTGA

Protein sequence

>MsG0380017647.01.T01

METKLLNPPYLIHFPSSSVSSSSSSSLSTRTFFPFHHNRSFKLIIAHNSHTEQQQSQSSKPIYSPTPPNRQLRTPHSGYHFDGTARKFFEGWYFKVSIPEKRQSFCFMYSVENPAFPKELTTLELAQYGPRFTGVGAQILGADDKYICQYTPQSHNFWGSRNELMLGNTFAAKQNSKPPNKEVPPKEFNDKVFEGFQVTPLWNQGFICDDGRSDYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERIEFENAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEIALTAAGGLRQIPGLTETFENAALIGIHYGGKFYEFVPWNGVVSWEVATWGYWFMSADNGNYVVNISLQLHYIILDVTSDMAALEVGGGPWFNTWKGKTSTPPVLSRAIGLPVDVDGLYNLFPLFKPPACRGNVVIKCNDQSLEGETYGQQSLANQWKGKHMLNESALMTKPSSTF*