Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018888.01.T01 | XP_013454911.1 | 96.538 | 491 | 17 | 0 | 1 | 491 | 42 | 532 | 0 | 981 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018888.01.T01 | Q3HRQ2 | 71.862 | 494 | 134 | 2 | 1 | 490 | 29 | 521 | 0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018888.01.T01 | A0A072UGT2 | 96.538 | 491 | 17 | 0 | 1 | 491 | 42 | 532 | 0.0 | 981 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048313.01 | MsG0480018888.01 | 0.837363 | 5.434391e-57 | 7.042249e-54 |
| MsG0180001113.01 | MsG0480018888.01 | 0.813755 | 2.179510e-51 | 1.435595e-48 |
| MsG0180004248.01 | MsG0480018888.01 | 0.806905 | 6.554592e-50 | 3.600551e-47 |
| MsG0180004747.01 | MsG0480018888.01 | 0.810550 | 1.090226e-50 | 6.591126e-48 |
| MsG0180005223.01 | MsG0480018888.01 | 0.822903 | 1.846753e-53 | 1.566319e-50 |
| MsG0180005226.01 | MsG0480018888.01 | 0.815793 | 7.705479e-52 | 5.364890e-49 |
| MsG0180005431.01 | MsG0480018888.01 | 0.833583 | 4.906910e-56 | 5.675342e-53 |
| MsG0280011449.01 | MsG0480018888.01 | 0.815552 | 8.719244e-52 | 6.030351e-49 |
| MsG0480018888.01 | MsG0480021054.01 | 0.809492 | 1.842310e-50 | 1.083207e-47 |
| MsG0480018888.01 | MsG0480022690.01 | 0.810644 | 1.040168e-50 | 6.304584e-48 |
| MsG0480018888.01 | MsG0680032197.01 | 0.808278 | 3.350370e-50 | 1.907719e-47 |
| MsG0480018888.01 | MsG0780040622.01 | 0.801351 | 9.381552e-49 | 4.470489e-46 |
| MsG0480018888.01 | MsG0780041800.01 | 0.818612 | 1.790163e-52 | 1.346363e-49 |
| MsG0480018888.01 | MsG0880042895.01 | 0.800615 | 1.326488e-48 | 6.204228e-46 |
| MsG0480018888.01 | MsG0880045374.01 | 0.808799 | 2.592846e-50 | 1.496525e-47 |
| MsG0480018888.01 | MsG0880046462.01 | 0.819201 | 1.315040e-52 | 1.005290e-49 |
| MsG0380017099.01 | MsG0480018888.01 | 0.804794 | 1.820344e-49 | 9.472749e-47 |
| MsG0380017317.01 | MsG0480018888.01 | 0.814773 | 1.298838e-51 | 8.793736e-49 |
| MsG0380017775.01 | MsG0480018888.01 | 0.806574 | 7.700493e-50 | 4.194089e-47 |
| MsG0380018047.01 | MsG0480018888.01 | 0.826811 | 2.210396e-54 | 2.095150e-51 |
| MsG0280006475.01 | MsG0480018888.01 | 0.819595 | 1.069245e-52 | 8.264386e-50 |
| MsG0280007136.01 | MsG0480018888.01 | 0.808846 | 2.534029e-50 | 1.464406e-47 |
| MsG0280010281.01 | MsG0480018888.01 | 0.813248 | 2.818172e-51 | 1.830750e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480018888.01 | MsG0680030360.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018888.01.T01 | MTR_4g019520 | 96.538 | 491 | 17 | 0 | 1 | 491 | 42 | 532 | 0.0 | 981 |
| MsG0480018888.01.T01 | MTR_7g114530 | 47.151 | 509 | 248 | 11 | 1 | 490 | 63 | 569 | 2.71e-151 | 444 |
| MsG0480018888.01.T01 | MTR_5g038410 | 43.889 | 540 | 248 | 14 | 1 | 490 | 1 | 535 | 2.05e-148 | 435 |
| MsG0480018888.01.T01 | MTR_1g023570 | 45.941 | 505 | 252 | 12 | 1 | 490 | 44 | 542 | 1.59e-146 | 431 |
| MsG0480018888.01.T01 | MTR_6g004960 | 44.794 | 509 | 258 | 10 | 1 | 490 | 11 | 515 | 8.44e-145 | 425 |
| MsG0480018888.01.T01 | MTR_3g113210 | 44.639 | 513 | 256 | 13 | 1 | 490 | 47 | 554 | 9.49e-142 | 419 |
| MsG0480018888.01.T01 | MTR_3g075520 | 42.941 | 510 | 271 | 10 | 1 | 491 | 1 | 509 | 1.85e-136 | 404 |
| MsG0480018888.01.T01 | MTR_8g102900 | 41.211 | 512 | 276 | 10 | 1 | 491 | 126 | 633 | 3.49e-131 | 394 |
| MsG0480018888.01.T01 | MTR_6g088300 | 41.393 | 517 | 274 | 11 | 1 | 490 | 70 | 584 | 3.29e-127 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018888.01.T01 | AT3G53950 | 70.624 | 497 | 138 | 3 | 1 | 490 | 48 | 543 | 0.0 | 734 |
| MsG0480018888.01.T01 | AT1G75620 | 47.515 | 503 | 248 | 11 | 1 | 491 | 49 | 547 | 5.96e-153 | 447 |
| MsG0480018888.01.T01 | AT3G57620 | 45.833 | 504 | 253 | 11 | 1 | 490 | 49 | 546 | 6.65e-153 | 447 |
| MsG0480018888.01.T01 | AT1G19900 | 45.149 | 505 | 260 | 10 | 1 | 490 | 45 | 547 | 5.11e-145 | 427 |
| MsG0480018888.01.T01 | AT1G14430 | 46.094 | 512 | 252 | 12 | 1 | 490 | 55 | 564 | 1.20e-142 | 421 |
| MsG0480018888.01.T01 | AT5G19580 | 42.562 | 484 | 255 | 11 | 24 | 490 | 116 | 593 | 8.91e-125 | 377 |
| MsG0480018888.01.T01 | AT1G67290 | 42.251 | 471 | 252 | 10 | 35 | 490 | 149 | 614 | 1.69e-120 | 366 |
Find 152 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTATTGAAGTGAATTT+AGG | 0.266676 | 4:-11115379 | MsG0480018888.01.T01:CDS |
| ACGCCATACAACACCGTTTC+AGG | 0.273365 | 4:+11115442 | None:intergenic |
| ACCGGTTGGGTTACGGTTCA+TGG | 0.288813 | 4:-11115671 | MsG0480018888.01.T01:CDS |
| AATCACACGGGTTGAATATT+CGG | 0.293301 | 4:+11116358 | None:intergenic |
| TAACGAAAATCGTGTGGTTC+GGG | 0.310975 | 4:-11116052 | MsG0480018888.01.T01:CDS |
| TAAAGTCTTGGCACAGTGCC+TGG | 0.354244 | 4:+11115640 | None:intergenic |
| GACGGGATCCGACCCGGTTT+GGG | 0.355668 | 4:-11115848 | MsG0480018888.01.T01:CDS |
| ATCCGACCCGGTTTGGGAAA+TGG | 0.361268 | 4:-11115842 | MsG0480018888.01.T01:CDS |
| ACCGACACATGGTGCTCTTC+TGG | 0.386972 | 4:-11116444 | MsG0480018888.01.T01:CDS |
| TCGGGTTTACCCGGAGTTAA+CGG | 0.387975 | 4:-11116034 | MsG0480018888.01.T01:CDS |
| CGGGTTTACCCGGAGTTAAC+GGG | 0.388275 | 4:-11116033 | MsG0480018888.01.T01:CDS |
| CGACGGGATCCGACCCGGTT+TGG | 0.388713 | 4:-11115849 | MsG0480018888.01.T01:CDS |
| ATTATCCATTTGTGTATCTT+CGG | 0.390138 | 4:+11116152 | None:intergenic |
| TGAACGGAATACGGATATTC+CGG | 0.397304 | 4:-11115899 | MsG0480018888.01.T01:CDS |
| CGTGTTTGCGAACACGAAAT+CGG | 0.404762 | 4:-11116088 | MsG0480018888.01.T01:CDS |
| TGAGAGAATAATGGGTGATA+TGG | 0.406764 | 4:-11115806 | MsG0480018888.01.T01:CDS |
| GTCAACGATTGGTCAAGCTT+GGG | 0.407088 | 4:-11115321 | MsG0480018888.01.T01:CDS |
| TTTATATCGACCTGGTGAAC+CGG | 0.410632 | 4:-11115689 | MsG0480018888.01.T01:CDS |
| TGCACCGCCAGGTTATTATA+TGG | 0.418499 | 4:-11115227 | MsG0480018888.01.T01:CDS |
| TTATCCGTCGGCGGGTAGTT+CGG | 0.421655 | 4:-11115998 | MsG0480018888.01.T01:CDS |
| TTAACGAAAATCGTGTGGTT+CGG | 0.425229 | 4:-11116053 | MsG0480018888.01.T01:CDS |
| TTCAACCCGTGTGATTCAAC+CGG | 0.427789 | 4:-11116351 | MsG0480018888.01.T01:CDS |
| TATGCCGTTTGAGAGAATAA+TGG | 0.427793 | 4:-11115815 | MsG0480018888.01.T01:CDS |
| TGGGAGTTGTGGGAGGATAA+TGG | 0.428256 | 4:-11115872 | MsG0480018888.01.T01:CDS |
| TCGTGTTCGCAAACACGAAA+AGG | 0.428988 | 4:+11116094 | None:intergenic |
| ACTTCAATAATTCCCACAAC+TGG | 0.433336 | 4:+11115388 | None:intergenic |
| GTTGGCTCTGCGGTGGTCGA+TGG | 0.442039 | 4:-11115298 | MsG0480018888.01.T01:CDS |
| TCTGGTTCATTTCTTCCAAA+CGG | 0.444311 | 4:-11116426 | MsG0480018888.01.T01:CDS |
| TCTTCGGTTTCTTGCAGAAA+CGG | 0.444669 | 4:+11116168 | None:intergenic |
| TTCGACGGCGAATTTGTTAC+CGG | 0.447108 | 4:-11115614 | MsG0480018888.01.T01:CDS |
| ATTCAACCGGGTCATGCGAT+TGG | 0.450450 | 4:-11116338 | MsG0480018888.01.T01:CDS |
| GGCGGGTAGTTCGGTGATGC+TGG | 0.450658 | 4:-11115989 | MsG0480018888.01.T01:CDS |
| ATATCCTCCATTTCCCAAAC+CGG | 0.453250 | 4:+11115835 | None:intergenic |
| ATCGACCTGGTGAACCGGTT+GGG | 0.456060 | 4:-11115684 | MsG0480018888.01.T01:CDS |
| ATGCCGTTTGAGAGAATAAT+GGG | 0.461994 | 4:-11115814 | MsG0480018888.01.T01:CDS |
| ATTCCGGCGCATGGGAGTTG+TGG | 0.464938 | 4:-11115883 | MsG0480018888.01.T01:CDS |
| CTGGTGAACCGGTTGGGTTA+CGG | 0.466700 | 4:-11115678 | MsG0480018888.01.T01:CDS |
| TCGTGTGGTTCGGGTTTACC+CGG | 0.467897 | 4:-11116043 | MsG0480018888.01.T01:CDS |
| ACCATGAACCGTAACCCAAC+CGG | 0.468515 | 4:+11115670 | None:intergenic |
| AAACCGGTGGTGACTTAGAC+GGG | 0.468824 | 4:-11116392 | MsG0480018888.01.T01:CDS |
| TTCACCAGGTCGATATAAAA+CGG | 0.477041 | 4:+11115693 | None:intergenic |
| GGGTTGGACCGATGTTGGTT+CGG | 0.478378 | 4:+11116580 | None:intergenic |
| TTCCGGCGCATGGGAGTTGT+GGG | 0.478627 | 4:-11115882 | MsG0480018888.01.T01:CDS |
| CTCGGTCCACCCGTTAACTC+CGG | 0.479222 | 4:+11116024 | None:intergenic |
| TCAGGCACTTCGAATATCTC+AGG | 0.481224 | 4:+11115460 | None:intergenic |
| TTCAACCGGGTCATGCGATT+GGG | 0.484013 | 4:-11116337 | MsG0480018888.01.T01:CDS |
| CCGGTTCACTAAAACCAAAC+CGG | 0.484133 | 4:-11116532 | MsG0480018888.01.T01:CDS |
| GTGCAACCATCCCACTCGGT+GGG | 0.485681 | 4:+11115245 | None:intergenic |
| GATGCGGTGGTTGTTGTTTG+TGG | 0.487191 | 4:-11115946 | MsG0480018888.01.T01:CDS |
| AGTGGGATGGTTGCACCGCC+AGG | 0.487641 | 4:-11115238 | MsG0480018888.01.T01:CDS |
| GGTCAACGATTGGTCAAGCT+TGG | 0.488405 | 4:-11115322 | MsG0480018888.01.T01:CDS |
| CTCTTCCCAATCGCATGACC+CGG | 0.491639 | 4:+11116332 | None:intergenic |
| ATGAGCGTAACAATCCGGTT+TGG | 0.492855 | 4:+11116518 | None:intergenic |
| CGAATTTGTTACCGGATGGA+AGG | 0.493268 | 4:-11115606 | MsG0480018888.01.T01:CDS |
| TCGAATTAAGCGAAGGTCGT+TGG | 0.493274 | 4:-11116299 | MsG0480018888.01.T01:CDS |
| AGTGTGCCTTTGCCAGTTGT+GGG | 0.497685 | 4:-11115400 | MsG0480018888.01.T01:CDS |
| CGATTGGTCAAGCTTGGGGT+TGG | 0.500671 | 4:-11115316 | MsG0480018888.01.T01:CDS |
| CGATGTTGGTTCGGTCTAAG+AGG | 0.501043 | 4:+11116589 | None:intergenic |
| TGGTCGATGGTGTTGGAAGG+TGG | 0.502054 | 4:-11115285 | MsG0480018888.01.T01:CDS |
| TCGGTGATGCTGGCTTTAGA+AGG | 0.505095 | 4:-11115979 | MsG0480018888.01.T01:CDS |
| GAGTGTGCCTTTGCCAGTTG+TGG | 0.506333 | 4:-11115401 | MsG0480018888.01.T01:CDS |
| CAAACCGGTGGTGACTTAGA+CGG | 0.512760 | 4:-11116393 | MsG0480018888.01.T01:CDS |
| TCACCAGGTCGATATAAAAC+GGG | 0.517151 | 4:+11115694 | None:intergenic |
| ATGATGATGACGGAACCATC+TGG | 0.518424 | 4:+11116255 | None:intergenic |
| GTTTGTAAAAGTGAACCGTT+TGG | 0.519490 | 4:+11116411 | None:intergenic |
| TTAGGAAGAAGATGAACATA+TGG | 0.519523 | 4:+11116123 | None:intergenic |
| TATCGACCTGGTGAACCGGT+TGG | 0.521135 | 4:-11115685 | MsG0480018888.01.T01:CDS |
| CGTAACCCAACCGGTTCACC+AGG | 0.522888 | 4:+11115679 | None:intergenic |
| TCACCCATTATTCTCTCAAA+CGG | 0.523026 | 4:+11115811 | None:intergenic |
| GTTTGTGGCGGTGCTCAATA+CGG | 0.523510 | 4:-11115931 | MsG0480018888.01.T01:CDS |
| CGGTGGTCGATGGTGTTGGA+AGG | 0.524502 | 4:-11115288 | MsG0480018888.01.T01:CDS |
| AAGGTGGAGGATCCGATGTA+TGG | 0.526774 | 4:-11115269 | MsG0480018888.01.T01:CDS |
| GTCATCATCATCGGTGGAAG+AGG | 0.527761 | 4:-11116243 | MsG0480018888.01.T01:CDS |
| GTGCCTGAAACGGTGTTGTA+TGG | 0.527835 | 4:-11115445 | MsG0480018888.01.T01:CDS |
| TCGGTCCACCCGTTAACTCC+GGG | 0.528086 | 4:+11116025 | None:intergenic |
| AATACGGATATTCCGGCGCA+TGG | 0.528189 | 4:-11115892 | MsG0480018888.01.T01:CDS |
| AGAAACCGAAGATACACAAA+TGG | 0.528804 | 4:-11116157 | MsG0480018888.01.T01:CDS |
| TTTACGGGTTGGACCGATGT+TGG | 0.532259 | 4:+11116575 | None:intergenic |
| ACTGAATGAGCGTAACAATC+CGG | 0.533549 | 4:+11116513 | None:intergenic |
| TCTGCGGTGGTCGATGGTGT+TGG | 0.534258 | 4:-11115292 | MsG0480018888.01.T01:CDS |
| ATTATAAATGGAGCTATGAA+AGG | 0.537384 | 4:-11115757 | MsG0480018888.01.T01:CDS |
| CAAGCTTGGGGTTGGCTCTG+CGG | 0.545621 | 4:-11115308 | MsG0480018888.01.T01:CDS |
| GAAACGGTGTTGTATGGCGT+AGG | 0.551406 | 4:-11115439 | MsG0480018888.01.T01:CDS |
| GTGCCACACTTGGCACACCT+TGG | 0.553755 | 4:+11115191 | None:intergenic |
| ATTTATAATCAAAACATCAC+CGG | 0.555102 | 4:+11115771 | None:intergenic |
| AACACGAAAAGGTTACCGTT+AGG | 0.555856 | 4:+11116105 | None:intergenic |
| AAAGTCTTGGCACAGTGCCT+GGG | 0.557778 | 4:+11115641 | None:intergenic |
| TATGTTCATCTTCTTCCTAA+CGG | 0.558720 | 4:-11116120 | MsG0480018888.01.T01:CDS |
| GATGGTTCCGTCATCATCAT+CGG | 0.561725 | 4:-11116252 | MsG0480018888.01.T01:CDS |
| CCGAGGAATTATCCGTCGGC+GGG | 0.561765 | 4:-11116006 | MsG0480018888.01.T01:CDS |
| AAACGGTGTTGTATGGCGTA+GGG | 0.561786 | 4:-11115438 | MsG0480018888.01.T01:CDS |
| GCTTGGGGTTGGCTCTGCGG+TGG | 0.561916 | 4:-11115305 | MsG0480018888.01.T01:CDS |
| CACTCGGTGGGGCCATACAT+CGG | 0.564008 | 4:+11115257 | None:intergenic |
| CTCCCACAACTCCCATGCGC+CGG | 0.564712 | 4:+11115880 | None:intergenic |
| TGTATCCAACGTGCCACACT+TGG | 0.569532 | 4:+11115181 | None:intergenic |
| TCAACGATTGGTCAAGCTTG+GGG | 0.570845 | 4:-11115320 | MsG0480018888.01.T01:CDS |
| ACGAATCAAATTCTTCCAGA+TGG | 0.571165 | 4:-11116270 | MsG0480018888.01.T01:CDS |
| TTATCTGAATCCAAATACTC+AGG | 0.573512 | 4:+11115496 | None:intergenic |
| GAATTTGTTACCGGATGGAA+GGG | 0.575020 | 4:-11115605 | MsG0480018888.01.T01:CDS |
| GCTAGTAAAACCCTTCCATC+CGG | 0.577472 | 4:+11115595 | None:intergenic |
| TTTGGGAGGAGTTTACGGGT+TGG | 0.577906 | 4:+11116564 | None:intergenic |
| ACAAACAACAACCACCGCAT+CGG | 0.579944 | 4:+11115948 | None:intergenic |
| GCCGTCGAATGATAAAGTCT+TGG | 0.580309 | 4:+11115628 | None:intergenic |
| TAAAACGATAAAACACATGT+GGG | 0.581204 | 4:+11115563 | None:intergenic |
| GATGTATGGCCCCACCGAGT+GGG | 0.582898 | 4:-11115255 | MsG0480018888.01.T01:CDS |
| GATATTCGAAGTGCCTGAAA+CGG | 0.583385 | 4:-11115455 | MsG0480018888.01.T01:CDS |
| TTAAAACGATAAAACACATG+TGG | 0.585965 | 4:+11115562 | None:intergenic |
| ACGGCGAATTTGTTACCGGA+TGG | 0.587006 | 4:-11115610 | MsG0480018888.01.T01:CDS |
| GGCGGTGCAACCATCCCACT+CGG | 0.587429 | 4:+11115241 | None:intergenic |
| TGCAACCATCCCACTCGGTG+GGG | 0.594099 | 4:+11115246 | None:intergenic |
| CTCTTAGACCGAACCAACAT+CGG | 0.595788 | 4:-11116588 | MsG0480018888.01.T01:CDS |
| GGTGCAACCATCCCACTCGG+TGG | 0.596224 | 4:+11115244 | None:intergenic |
| TATCCTCCATTTCCCAAACC+GGG | 0.596564 | 4:+11115836 | None:intergenic |
| TGTGGGAGGATAATGGCGAC+GGG | 0.597317 | 4:-11115865 | MsG0480018888.01.T01:CDS |
| GATATGGTAATTCTACCAAC+CGG | 0.597681 | 4:-11115790 | MsG0480018888.01.T01:CDS |
| GCCAAGACTTTATCATTCGA+CGG | 0.597876 | 4:-11115629 | MsG0480018888.01.T01:CDS |
| TCGATGGTGTTGGAAGGTGG+AGG | 0.600846 | 4:-11115282 | MsG0480018888.01.T01:CDS |
| ATAATCAAAACATCACCGGT+TGG | 0.601564 | 4:+11115775 | None:intergenic |
| ATAATTCCCACAACTGGCAA+AGG | 0.601744 | 4:+11115394 | None:intergenic |
| CTCCATTTCCCAAACCGGGT+CGG | 0.602491 | 4:+11115840 | None:intergenic |
| CCCGCCGACGGATAATTCCT+CGG | 0.603356 | 4:+11116006 | None:intergenic |
| AATGGCGACGGGATCCGACC+CGG | 0.603868 | 4:-11115854 | MsG0480018888.01.T01:CDS |
| TTGTGGGAGGATAATGGCGA+CGG | 0.606872 | 4:-11115866 | MsG0480018888.01.T01:CDS |
| ATACGGATATTCCGGCGCAT+GGG | 0.609534 | 4:-11115891 | MsG0480018888.01.T01:CDS |
| CATGACCCGGTTGAATCACA+CGG | 0.611488 | 4:+11116345 | None:intergenic |
| CGGCGCATGGGAGTTGTGGG+AGG | 0.611553 | 4:-11115879 | MsG0480018888.01.T01:CDS |
| GAACCCGTCTAAGTCACCAC+CGG | 0.611682 | 4:+11116389 | None:intergenic |
| TAAAGATGTTGAGTTTGCGA+CGG | 0.616862 | 4:-11115542 | MsG0480018888.01.T01:CDS |
| TCTTCCACCGATGATGATGA+CGG | 0.621819 | 4:+11116245 | None:intergenic |
| TATGGCCCCACCGAGTGGGA+TGG | 0.638714 | 4:-11115251 | MsG0480018888.01.T01:CDS |
| ACCGAGGAATTATCCGTCGG+CGG | 0.639122 | 4:-11116007 | MsG0480018888.01.T01:CDS |
| TCAACCCGTGTGATTCAACC+GGG | 0.642606 | 4:-11116350 | MsG0480018888.01.T01:CDS |
| CGATGTATGGCCCCACCGAG+TGG | 0.643067 | 4:-11115256 | MsG0480018888.01.T01:CDS |
| GTTTACCCGGAGTTAACGGG+TGG | 0.643181 | 4:-11116030 | MsG0480018888.01.T01:CDS |
| CGACCCGGTTTGGGAAATGG+AGG | 0.646092 | 4:-11115839 | MsG0480018888.01.T01:CDS |
| TGACTTTAACGAAAATCGTG+TGG | 0.648534 | 4:-11116058 | MsG0480018888.01.T01:CDS |
| ATGGTGTTTGCTGTTAACCA+AGG | 0.651581 | 4:-11115208 | MsG0480018888.01.T01:CDS |
| CGGAGTTAACGGGTGGACCG+AGG | 0.655464 | 4:-11116023 | MsG0480018888.01.T01:CDS |
| GCAAACACCATATAATAACC+TGG | 0.656118 | 4:+11115220 | None:intergenic |
| GGTTCCGTCATCATCATCGG+TGG | 0.657675 | 4:-11116249 | MsG0480018888.01.T01:CDS |
| ATCACCGAACTACCCGCCGA+CGG | 0.658505 | 4:+11115994 | None:intergenic |
| AAGAGCACCATGTGTCGGTG+AGG | 0.658810 | 4:+11116448 | None:intergenic |
| TATAAAACGGGATTCAAACA+CGG | 0.660384 | 4:+11115706 | None:intergenic |
| ACCAGAAGAGCACCATGTGT+CGG | 0.660505 | 4:+11116443 | None:intergenic |
| TGGACCGAGGAATTATCCGT+CGG | 0.669449 | 4:-11116010 | MsG0480018888.01.T01:CDS |
| AACGACGTCGAATTAAGCGA+AGG | 0.672371 | 4:-11116306 | MsG0480018888.01.T01:CDS |
| GGAGCTATGAAAGGTACACA+AGG | 0.678870 | 4:-11115748 | MsG0480018888.01.T01:CDS |
| GCGGTGGTTGTTGTTTGTGG+CGG | 0.680386 | 4:-11115943 | MsG0480018888.01.T01:CDS |
| ATGACCCGGTTGAATCACAC+GGG | 0.686842 | 4:+11116346 | None:intergenic |
| TAACCAAGGTGTGCCAAGTG+TGG | 0.694344 | 4:-11115194 | MsG0480018888.01.T01:CDS |
| GTGTGCCAAGTGTGGCACGT+TGG | 0.703709 | 4:-11115186 | MsG0480018888.01.T01:CDS |
| AACACCATATAATAACCTGG+CGG | 0.782194 | 4:+11115223 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATCAAAACATCAC+CGG | + | Chr4:11116027-11116046 | None:intergenic | 20.0% |
| ! | ATTATAAATGGAGCTATGAA+AGG | - | Chr4:11116038-11116057 | MsG0480018888.01.T01:CDS | 25.0% |
| ! | ATTATCCATTTGTGTATCTT+CGG | + | Chr4:11115646-11115665 | None:intergenic | 25.0% |
| ! | GGAATTATTGAAGTGAATTT+AGG | - | Chr4:11116416-11116435 | MsG0480018888.01.T01:CDS | 25.0% |
| ! | TAAAACGATAAAACACATGT+GGG | + | Chr4:11116235-11116254 | None:intergenic | 25.0% |
| ! | TTAAAACGATAAAACACATG+TGG | + | Chr4:11116236-11116255 | None:intergenic | 25.0% |
| !!! | GGTGATGTTTTGATTATAAA+TGG | - | Chr4:11116026-11116045 | MsG0480018888.01.T01:CDS | 25.0% |
| GAAAAACTATGTGTAGCAAA+AGG | + | Chr4:11116449-11116468 | None:intergenic | 30.0% | |
| TATAAAACGGGATTCAAACA+CGG | + | Chr4:11116092-11116111 | None:intergenic | 30.0% | |
| TATGTTCATCTTCTTCCTAA+CGG | - | Chr4:11115675-11115694 | MsG0480018888.01.T01:CDS | 30.0% | |
| TTAGGAAGAAGATGAACATA+TGG | + | Chr4:11115675-11115694 | None:intergenic | 30.0% | |
| TTATCTGAATCCAAATACTC+AGG | + | Chr4:11116302-11116321 | None:intergenic | 30.0% | |
| AACACCATATAATAACCTGG+CGG | + | Chr4:11116575-11116594 | None:intergenic | 35.0% | |
| ACGAATCAAATTCTTCCAGA+TGG | - | Chr4:11115525-11115544 | MsG0480018888.01.T01:CDS | 35.0% | |
| ACTTCAATAATTCCCACAAC+TGG | + | Chr4:11116410-11116429 | None:intergenic | 35.0% | |
| AGAAACCGAAGATACACAAA+TGG | - | Chr4:11115638-11115657 | MsG0480018888.01.T01:CDS | 35.0% | |
| ATAATCAAAACATCACCGGT+TGG | + | Chr4:11116023-11116042 | None:intergenic | 35.0% | |
| GATATGGTAATTCTACCAAC+CGG | - | Chr4:11116005-11116024 | MsG0480018888.01.T01:CDS | 35.0% | |
| GCAAACACCATATAATAACC+TGG | + | Chr4:11116578-11116597 | None:intergenic | 35.0% | |
| GTTTGTAAAAGTGAACCGTT+TGG | + | Chr4:11115387-11115406 | None:intergenic | 35.0% | |
| TAAAGATGTTGAGTTTGCGA+CGG | - | Chr4:11116253-11116272 | MsG0480018888.01.T01:CDS | 35.0% | |
| TCACCCATTATTCTCTCAAA+CGG | + | Chr4:11115987-11116006 | None:intergenic | 35.0% | |
| TGACTTTAACGAAAATCGTG+TGG | - | Chr4:11115737-11115756 | MsG0480018888.01.T01:CDS | 35.0% | |
| TTAACGAAAATCGTGTGGTT+CGG | - | Chr4:11115742-11115761 | MsG0480018888.01.T01:CDS | 35.0% | |
| TTCACCAGGTCGATATAAAA+CGG | + | Chr4:11116105-11116124 | None:intergenic | 35.0% | |
| ! | AATACGGTGCTTTTCTTGAA+CGG | - | Chr4:11115880-11115899 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | AATCACACGGGTTGAATATT+CGG | + | Chr4:11115440-11115459 | None:intergenic | 35.0% |
| ! | ATGCCGTTTGAGAGAATAAT+GGG | - | Chr4:11115981-11116000 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | GCTACACATAGTTTTTCACA+GGG | - | Chr4:11116452-11116471 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | TATGCCGTTTGAGAGAATAA+TGG | - | Chr4:11115980-11115999 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | TCTGGTTCATTTCTTCCAAA+CGG | - | Chr4:11115369-11115388 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | TGCTACACATAGTTTTTCAC+AGG | - | Chr4:11116451-11116470 | MsG0480018888.01.T01:CDS | 35.0% |
| ! | TGCTTTTCTTGAACGGAATA+CGG | - | Chr4:11115887-11115906 | MsG0480018888.01.T01:CDS | 35.0% |
| !! | AACGGTTCACTTTTACAAAC+CGG | - | Chr4:11115387-11115406 | MsG0480018888.01.T01:CDS | 35.0% |
| !! | TGAGAGAATAATGGGTGATA+TGG | - | Chr4:11115989-11116008 | MsG0480018888.01.T01:CDS | 35.0% |
| !!! | ACAAGGTTTTGAAATGGGTT+CGG | - | Chr4:11116064-11116083 | MsG0480018888.01.T01:CDS | 35.0% |
| !!! | AGGTACACAAGGTTTTGAAA+TGG | - | Chr4:11116058-11116077 | MsG0480018888.01.T01:CDS | 35.0% |
| !!! | GGTACACAAGGTTTTGAAAT+GGG | - | Chr4:11116059-11116078 | MsG0480018888.01.T01:CDS | 35.0% |
| AACACGAAAAGGTTACCGTT+AGG | + | Chr4:11115693-11115712 | None:intergenic | 40.0% | |
| ACTGAATGAGCGTAACAATC+CGG | + | Chr4:11115285-11115304 | None:intergenic | 40.0% | |
| ATAATTCCCACAACTGGCAA+AGG | + | Chr4:11116404-11116423 | None:intergenic | 40.0% | |
| ATATCCTCCATTTCCCAAAC+CGG | + | Chr4:11115963-11115982 | None:intergenic | 40.0% | |
| GCCAAGACTTTATCATTCGA+CGG | - | Chr4:11116166-11116185 | MsG0480018888.01.T01:CDS | 40.0% | |
| TAAAAATCCTCACCGACACA+TGG | - | Chr4:11115340-11115359 | MsG0480018888.01.T01:CDS | 40.0% | |
| TAACGAAAATCGTGTGGTTC+GGG | - | Chr4:11115743-11115762 | MsG0480018888.01.T01:CDS | 40.0% | |
| TCACCAGGTCGATATAAAAC+GGG | + | Chr4:11116104-11116123 | None:intergenic | 40.0% | |
| TCTTCGGTTTCTTGCAGAAA+CGG | + | Chr4:11115630-11115649 | None:intergenic | 40.0% | |
| TGAACGGAATACGGATATTC+CGG | - | Chr4:11115896-11115915 | MsG0480018888.01.T01:CDS | 40.0% | |
| TTTATATCGACCTGGTGAAC+CGG | - | Chr4:11116106-11116125 | MsG0480018888.01.T01:CDS | 40.0% | |
| ! | AATCCCGTTTTATATCGACC+TGG | - | Chr4:11116098-11116117 | MsG0480018888.01.T01:CDS | 40.0% |
| ! | AGAAGGTGAATTTTCCGATG+CGG | - | Chr4:11115833-11115852 | MsG0480018888.01.T01:CDS | 40.0% |
| ! | GATATTCGAAGTGCCTGAAA+CGG | - | Chr4:11116340-11116359 | MsG0480018888.01.T01:CDS | 40.0% |
| ! | TTTTACCCGAAACGCGAAAA+CGG | - | Chr4:11115591-11115610 | MsG0480018888.01.T01:CDS | 40.0% |
| ! | TTTTTCACAGGGTCAACGAT+TGG | - | Chr4:11116463-11116482 | MsG0480018888.01.T01:CDS | 40.0% |
| !! | ATGGTGTTTGCTGTTAACCA+AGG | - | Chr4:11116587-11116606 | MsG0480018888.01.T01:CDS | 40.0% |
| !! | GAATTTGTTACCGGATGGAA+GGG | - | Chr4:11116190-11116209 | MsG0480018888.01.T01:CDS | 40.0% |
| !! | GTGTCGGTGAGGATTTTTAA+GGG | + | Chr4:11115339-11115358 | None:intergenic | 40.0% |
| !! | TGTCGGTGAGGATTTTTAAG+GGG | + | Chr4:11115338-11115357 | None:intergenic | 40.0% |
| !! | TGTGTCGGTGAGGATTTTTA+AGG | + | Chr4:11115340-11115359 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGGAGGAGTTTA+CGG | + | Chr4:11115239-11115258 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGAGGAGTTTAC+GGG | + | Chr4:11115238-11115257 | None:intergenic | 40.0% |
| !!! | TGAACCGGCAATGGTTTTTT+GGG | + | Chr4:11115251-11115270 | None:intergenic | 40.0% |
| AACGACGTCGAATTAAGCGA+AGG | - | Chr4:11115489-11115508 | MsG0480018888.01.T01:CDS | 45.0% | |
| ACAAACAACAACCACCGCAT+CGG | + | Chr4:11115850-11115869 | None:intergenic | 45.0% | |
| ATGAGCGTAACAATCCGGTT+TGG | + | Chr4:11115280-11115299 | None:intergenic | 45.0% | |
| CCGGTTCACTAAAACCAAAC+CGG | - | Chr4:11115263-11115282 | MsG0480018888.01.T01:CDS | 45.0% | |
| CGTGTTTGCGAACACGAAAT+CGG | - | Chr4:11115707-11115726 | MsG0480018888.01.T01:CDS | 45.0% | |
| CTCTTAGACCGAACCAACAT+CGG | - | Chr4:11115207-11115226 | MsG0480018888.01.T01:CDS | 45.0% | |
| GATGGTTCCGTCATCATCAT+CGG | - | Chr4:11115543-11115562 | MsG0480018888.01.T01:CDS | 45.0% | |
| GCCGTCGAATGATAAAGTCT+TGG | + | Chr4:11116170-11116189 | None:intergenic | 45.0% | |
| GCTAGTAAAACCCTTCCATC+CGG | + | Chr4:11116203-11116222 | None:intergenic | 45.0% | |
| TATCCTCCATTTCCCAAACC+GGG | + | Chr4:11115962-11115981 | None:intergenic | 45.0% | |
| TCAGGCACTTCGAATATCTC+AGG | + | Chr4:11116338-11116357 | None:intergenic | 45.0% | |
| TCCTCCCAAAAAACCATTGC+CGG | - | Chr4:11115244-11115263 | MsG0480018888.01.T01:CDS | 45.0% | |
| TCGAATTAAGCGAAGGTCGT+TGG | - | Chr4:11115496-11115515 | MsG0480018888.01.T01:CDS | 45.0% | |
| TCGTGTTCGCAAACACGAAA+AGG | + | Chr4:11115704-11115723 | None:intergenic | 45.0% | |
| TGCACCGCCAGGTTATTATA+TGG | - | Chr4:11116568-11116587 | MsG0480018888.01.T01:CDS | 45.0% | |
| TTCAACCCGTGTGATTCAAC+CGG | - | Chr4:11115444-11115463 | MsG0480018888.01.T01:CDS | 45.0% | |
| ! | AGCGTTTTCGCCTGAGTATT+TGG | - | Chr4:11116289-11116308 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | GATGGAAGGGTTTTACTAGC+GGG | - | Chr4:11116203-11116222 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | GGAGCTATGAAAGGTACACA+AGG | - | Chr4:11116047-11116066 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | GGATGGAAGGGTTTTACTAG+CGG | - | Chr4:11116202-11116221 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | GTCAACGATTGGTCAAGCTT+GGG | - | Chr4:11116474-11116493 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | TCAACGATTGGTCAAGCTTG+GGG | - | Chr4:11116475-11116494 | MsG0480018888.01.T01:CDS | 45.0% |
| ! | TCTTCCACCGATGATGATGA+CGG | + | Chr4:11115553-11115572 | None:intergenic | 45.0% |
| !! | AAACGGTGTTGTATGGCGTA+GGG | - | Chr4:11116357-11116376 | MsG0480018888.01.T01:CDS | 45.0% |
| !! | ATGATGATGACGGAACCATC+TGG | + | Chr4:11115543-11115562 | None:intergenic | 45.0% |
| !! | CGAATTTGTTACCGGATGGA+AGG | - | Chr4:11116189-11116208 | MsG0480018888.01.T01:CDS | 45.0% |
| !! | GGTTCACTTTTACAAACCGG+TGG | - | Chr4:11115390-11115409 | MsG0480018888.01.T01:CDS | 45.0% |
| !! | TTCGACGGCGAATTTGTTAC+CGG | - | Chr4:11116181-11116200 | MsG0480018888.01.T01:CDS | 45.0% |
| !!! | CCGGTTTGGTTTTAGTGAAC+CGG | + | Chr4:11115266-11115285 | None:intergenic | 45.0% |
| !!! | GGCGGAGTTGGTTTTTTATG+GGG | + | Chr4:11115317-11115336 | None:intergenic | 45.0% |
| !!! | GGGCGGAGTTGGTTTTTTAT+GGG | + | Chr4:11115318-11115337 | None:intergenic | 45.0% |
| !!! | GGTTTTTTATGGGGTCGAAG+AGG | + | Chr4:11115308-11115327 | None:intergenic | 45.0% |
| !!! | GTGAACCGGCAATGGTTTTT+TGG | + | Chr4:11115252-11115271 | None:intergenic | 45.0% |
| !!! | TGGTTTTAGTGAACCGGCAA+TGG | + | Chr4:11115260-11115279 | None:intergenic | 45.0% |
| AAACCGGTGGTGACTTAGAC+GGG | - | Chr4:11115403-11115422 | MsG0480018888.01.T01:CDS | 50.0% | |
| AAAGTCTTGGCACAGTGCCT+GGG | + | Chr4:11116157-11116176 | None:intergenic | 50.0% | |
| AAGGTGGAGGATCCGATGTA+TGG | - | Chr4:11116526-11116545 | MsG0480018888.01.T01:CDS | 50.0% | |
| AATACGGATATTCCGGCGCA+TGG | - | Chr4:11115903-11115922 | MsG0480018888.01.T01:CDS | 50.0% | |
| ACCATGAACCGTAACCCAAC+CGG | + | Chr4:11116128-11116147 | None:intergenic | 50.0% | |
| ACGCCATACAACACCGTTTC+AGG | + | Chr4:11116356-11116375 | None:intergenic | 50.0% | |
| AGTGTGCCTTTGCCAGTTGT+GGG | - | Chr4:11116395-11116414 | MsG0480018888.01.T01:CDS | 50.0% | |
| ATACGGATATTCCGGCGCAT+GGG | - | Chr4:11115904-11115923 | MsG0480018888.01.T01:CDS | 50.0% | |
| ATGACCCGGTTGAATCACAC+GGG | + | Chr4:11115452-11115471 | None:intergenic | 50.0% | |
| ATTCAACCGGGTCATGCGAT+TGG | - | Chr4:11115457-11115476 | MsG0480018888.01.T01:CDS | 50.0% | |
| CAAACCGGTGGTGACTTAGA+CGG | - | Chr4:11115402-11115421 | MsG0480018888.01.T01:CDS | 50.0% | |
| CATGACCCGGTTGAATCACA+CGG | + | Chr4:11115453-11115472 | None:intergenic | 50.0% | |
| GTCATCATCATCGGTGGAAG+AGG | - | Chr4:11115552-11115571 | MsG0480018888.01.T01:CDS | 50.0% | |
| GTTTGTGGCGGTGCTCAATA+CGG | - | Chr4:11115864-11115883 | MsG0480018888.01.T01:CDS | 50.0% | |
| TAAAGTCTTGGCACAGTGCC+TGG | + | Chr4:11116158-11116177 | None:intergenic | 50.0% | |
| TAACCAAGGTGTGCCAAGTG+TGG | - | Chr4:11116601-11116620 | MsG0480018888.01.T01:CDS | 50.0% | |
| TCAACCCGTGTGATTCAACC+GGG | - | Chr4:11115445-11115464 | MsG0480018888.01.T01:CDS | 50.0% | |
| TCGGGTTTACCCGGAGTTAA+CGG | - | Chr4:11115761-11115780 | MsG0480018888.01.T01:CDS | 50.0% | |
| TGGACCGAGGAATTATCCGT+CGG | - | Chr4:11115785-11115804 | MsG0480018888.01.T01:CDS | 50.0% | |
| TGGGAGTTGTGGGAGGATAA+TGG | - | Chr4:11115923-11115942 | MsG0480018888.01.T01:CDS | 50.0% | |
| TGTATCCAACGTGCCACACT+TGG | + | Chr4:11116617-11116636 | None:intergenic | 50.0% | |
| TTCAACCGGGTCATGCGATT+GGG | - | Chr4:11115458-11115477 | MsG0480018888.01.T01:CDS | 50.0% | |
| TTTGGGAGGAGTTTACGGGT+TGG | + | Chr4:11115234-11115253 | None:intergenic | 50.0% | |
| ! | ACGACACCGTTTTCGCGTTT+CGG | + | Chr4:11115600-11115619 | None:intergenic | 50.0% |
| ! | AGGTGAATTTTCCGATGCGG+TGG | - | Chr4:11115836-11115855 | MsG0480018888.01.T01:CDS | 50.0% |
| ! | GGTCAACGATTGGTCAAGCT+TGG | - | Chr4:11116473-11116492 | MsG0480018888.01.T01:CDS | 50.0% |
| ! | TTGTGGGAGGATAATGGCGA+CGG | - | Chr4:11115929-11115948 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | ACCAGAAGAGCACCATGTGT+CGG | + | Chr4:11115355-11115374 | None:intergenic | 50.0% |
| !! | ACGGCGAATTTGTTACCGGA+TGG | - | Chr4:11116185-11116204 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | CGATGTTGGTTCGGTCTAAG+AGG | + | Chr4:11115209-11115228 | None:intergenic | 50.0% |
| !! | CGGTGAGGATTTTTAAGGGG+CGG | + | Chr4:11115335-11115354 | None:intergenic | 50.0% |
| !! | GAAACGGTGTTGTATGGCGT+AGG | - | Chr4:11116356-11116375 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | GATGCGGTGGTTGTTGTTTG+TGG | - | Chr4:11115849-11115868 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | GGATTTTTAAGGGGCGGAGT+TGG | + | Chr4:11115329-11115348 | None:intergenic | 50.0% |
| !! | GTGCCTGAAACGGTGTTGTA+TGG | - | Chr4:11116350-11116369 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | TCGGTGATGCTGGCTTTAGA+AGG | - | Chr4:11115816-11115835 | MsG0480018888.01.T01:CDS | 50.0% |
| !! | TTTACGGGTTGGACCGATGT+TGG | + | Chr4:11115223-11115242 | None:intergenic | 50.0% |
| !!! | ACCGGCAATGGTTTTTTGGG+AGG | + | Chr4:11115248-11115267 | None:intergenic | 50.0% |
| !!! | CGGTTCATGGTTTTGAACCC+AGG | - | Chr4:11116137-11116156 | MsG0480018888.01.T01:CDS | 50.0% |
| !!! | GGGGCGGAGTTGGTTTTTTA+TGG | + | Chr4:11115319-11115338 | None:intergenic | 50.0% |
| ACCGACACATGGTGCTCTTC+TGG | - | Chr4:11115351-11115370 | MsG0480018888.01.T01:CDS | 55.0% | |
| ACCGAGGAATTATCCGTCGG+CGG | - | Chr4:11115788-11115807 | MsG0480018888.01.T01:CDS | 55.0% | |
| ACCGGTTGGGTTACGGTTCA+TGG | - | Chr4:11116124-11116143 | MsG0480018888.01.T01:CDS | 55.0% | |
| ATCGACCTGGTGAACCGGTT+GGG | - | Chr4:11116111-11116130 | MsG0480018888.01.T01:CDS | 55.0% | |
| CGGGTTTACCCGGAGTTAAC+GGG | - | Chr4:11115762-11115781 | MsG0480018888.01.T01:CDS | 55.0% | |
| CTCCATTTCCCAAACCGGGT+CGG | + | Chr4:11115958-11115977 | None:intergenic | 55.0% | |
| CTCTTCCCAATCGCATGACC+CGG | + | Chr4:11115466-11115485 | None:intergenic | 55.0% | |
| CTGGTGAACCGGTTGGGTTA+CGG | - | Chr4:11116117-11116136 | MsG0480018888.01.T01:CDS | 55.0% | |
| GAACCCGTCTAAGTCACCAC+CGG | + | Chr4:11115409-11115428 | None:intergenic | 55.0% | |
| GAGTGTGCCTTTGCCAGTTG+TGG | - | Chr4:11116394-11116413 | MsG0480018888.01.T01:CDS | 55.0% | |
| GGTTCCGTCATCATCATCGG+TGG | - | Chr4:11115546-11115565 | MsG0480018888.01.T01:CDS | 55.0% | |
| GTTTACCCGGAGTTAACGGG+TGG | - | Chr4:11115765-11115784 | MsG0480018888.01.T01:CDS | 55.0% | |
| TATCGACCTGGTGAACCGGT+TGG | - | Chr4:11116110-11116129 | MsG0480018888.01.T01:CDS | 55.0% | |
| TTATCCGTCGGCGGGTAGTT+CGG | - | Chr4:11115797-11115816 | MsG0480018888.01.T01:CDS | 55.0% | |
| ! | CGACACCGTTTTCGCGTTTC+GGG | + | Chr4:11115599-11115618 | None:intergenic | 55.0% |
| ! | CGATTGGTCAAGCTTGGGGT+TGG | - | Chr4:11116479-11116498 | MsG0480018888.01.T01:CDS | 55.0% |
| ! | GGGTTGGACCGATGTTGGTT+CGG | + | Chr4:11115218-11115237 | None:intergenic | 55.0% |
| ! | TCGATGGTGTTGGAAGGTGG+AGG | - | Chr4:11116513-11116532 | MsG0480018888.01.T01:CDS | 55.0% |
| ! | TCGTGTGGTTCGGGTTTACC+CGG | - | Chr4:11115752-11115771 | MsG0480018888.01.T01:CDS | 55.0% |
| ! | TGGTCGATGGTGTTGGAAGG+TGG | - | Chr4:11116510-11116529 | MsG0480018888.01.T01:CDS | 55.0% |
| ! | TGTGGGAGGATAATGGCGAC+GGG | - | Chr4:11115930-11115949 | MsG0480018888.01.T01:CDS | 55.0% |
| !! | AAGAGCACCATGTGTCGGTG+AGG | + | Chr4:11115350-11115369 | None:intergenic | 55.0% |
| !! | ATCCGACCCGGTTTGGGAAA+TGG | - | Chr4:11115953-11115972 | MsG0480018888.01.T01:CDS | 55.0% |
| !! | GCGGTGGTTGTTGTTTGTGG+CGG | - | Chr4:11115852-11115871 | MsG0480018888.01.T01:CDS | 55.0% |
| ATCACCGAACTACCCGCCGA+CGG | + | Chr4:11115804-11115823 | None:intergenic | 60.0% | |
| ATTCCGGCGCATGGGAGTTG+TGG | - | Chr4:11115912-11115931 | MsG0480018888.01.T01:CDS | 60.0% | |
| CCCGCCGACGGATAATTCCT+CGG | + | Chr4:11115792-11115811 | None:intergenic | 60.0% | |
| CCGAGGAATTATCCGTCGGC+GGG | - | Chr4:11115789-11115808 | MsG0480018888.01.T01:CDS | 60.0% | |
| CTCGGTCCACCCGTTAACTC+CGG | + | Chr4:11115774-11115793 | None:intergenic | 60.0% | |
| GATGTATGGCCCCACCGAGT+GGG | - | Chr4:11116540-11116559 | MsG0480018888.01.T01:CDS | 60.0% | |
| GTGCAACCATCCCACTCGGT+GGG | + | Chr4:11116553-11116572 | None:intergenic | 60.0% | |
| GTGCCACACTTGGCACACCT+TGG | + | Chr4:11116607-11116626 | None:intergenic | 60.0% | |
| GTGTGCCAAGTGTGGCACGT+TGG | - | Chr4:11116609-11116628 | MsG0480018888.01.T01:CDS | 60.0% | |
| TCGGTCCACCCGTTAACTCC+GGG | + | Chr4:11115773-11115792 | None:intergenic | 60.0% | |
| TCTGCGGTGGTCGATGGTGT+TGG | - | Chr4:11116503-11116522 | MsG0480018888.01.T01:CDS | 60.0% | |
| TTCCGGCGCATGGGAGTTGT+GGG | - | Chr4:11115913-11115932 | MsG0480018888.01.T01:CDS | 60.0% | |
| ! | CACTCGGTGGGGCCATACAT+CGG | + | Chr4:11116541-11116560 | None:intergenic | 60.0% |
| ! | CGGTGGTCGATGGTGTTGGA+AGG | - | Chr4:11116507-11116526 | MsG0480018888.01.T01:CDS | 60.0% |
| ! | CGTAACCCAACCGGTTCACC+AGG | + | Chr4:11116119-11116138 | None:intergenic | 60.0% |
| ! | TGCAACCATCCCACTCGGTG+GGG | + | Chr4:11116552-11116571 | None:intergenic | 60.0% |
| !! | CAAGCTTGGGGTTGGCTCTG+CGG | - | Chr4:11116487-11116506 | MsG0480018888.01.T01:CDS | 60.0% |
| !! | CGACCCGGTTTGGGAAATGG+AGG | - | Chr4:11115956-11115975 | MsG0480018888.01.T01:CDS | 60.0% |
| AATGGCGACGGGATCCGACC+CGG | - | Chr4:11115941-11115960 | MsG0480018888.01.T01:CDS | 65.0% | |
| AGTGGGATGGTTGCACCGCC+AGG | - | Chr4:11116557-11116576 | MsG0480018888.01.T01:CDS | 65.0% | |
| CGATGTATGGCCCCACCGAG+TGG | - | Chr4:11116539-11116558 | MsG0480018888.01.T01:CDS | 65.0% | |
| CTCCCACAACTCCCATGCGC+CGG | + | Chr4:11115918-11115937 | None:intergenic | 65.0% | |
| GACGGGATCCGACCCGGTTT+GGG | - | Chr4:11115947-11115966 | MsG0480018888.01.T01:CDS | 65.0% | |
| GGCGGTGCAACCATCCCACT+CGG | + | Chr4:11116557-11116576 | None:intergenic | 65.0% | |
| GGTGCAACCATCCCACTCGG+TGG | + | Chr4:11116554-11116573 | None:intergenic | 65.0% | |
| TATGGCCCCACCGAGTGGGA+TGG | - | Chr4:11116544-11116563 | MsG0480018888.01.T01:CDS | 65.0% | |
| ! | CGGAGTTAACGGGTGGACCG+AGG | - | Chr4:11115772-11115791 | MsG0480018888.01.T01:CDS | 65.0% |
| ! | GGCGGGTAGTTCGGTGATGC+TGG | - | Chr4:11115806-11115825 | MsG0480018888.01.T01:CDS | 65.0% |
| !! | GTTGGCTCTGCGGTGGTCGA+TGG | - | Chr4:11116497-11116516 | MsG0480018888.01.T01:CDS | 65.0% |
| CGACGGGATCCGACCCGGTT+TGG | - | Chr4:11115946-11115965 | MsG0480018888.01.T01:CDS | 70.0% | |
| CGGCGCATGGGAGTTGTGGG+AGG | - | Chr4:11115916-11115935 | MsG0480018888.01.T01:CDS | 70.0% | |
| !! | GCTTGGGGTTGGCTCTGCGG+TGG | - | Chr4:11116490-11116509 | MsG0480018888.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 11115171 | 11116646 | 11115171 | ID=MsG0480018888.01;Name=MsG0480018888.01 |
| Chr4 | mRNA | 11115171 | 11116646 | 11115171 | ID=MsG0480018888.01.T01;Parent=MsG0480018888.01;Name=MsG0480018888.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|491 |
| Chr4 | exon | 11115171 | 11116646 | 11115171 | ID=MsG0480018888.01.T01:exon:6945;Parent=MsG0480018888.01.T01 |
| Chr4 | CDS | 11115171 | 11116646 | 11115171 | ID=MsG0480018888.01.T01:cds;Parent=MsG0480018888.01.T01 |
| Gene Sequence |
| Protein sequence |
