AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042644.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042644.01.T01 MTR_8g018650 73.540 839 183 8 1 832 1 807 0.0 1266
MsG0880042644.01.T01 MTR_8g018620 73.333 840 183 10 1 832 1 807 0.0 1252
MsG0880042644.01.T01 MTR_8g018570 65.646 882 241 10 1 832 1 870 0.0 1179
MsG0880042644.01.T01 MTR_8g020990 65.114 880 247 8 1 832 1 868 0.0 1159
MsG0880042644.01.T01 MTR_8g018550 66.136 880 238 8 1 832 1 868 0.0 1157
MsG0880042644.01.T01 MTR_8g018430 64.179 871 256 8 6 832 3 861 0.0 1149
MsG0880042644.01.T01 MTR_8g018690 63.905 881 253 8 1 832 1 865 0.0 1142
MsG0880042644.01.T01 MTR_8g018520 64.318 880 254 8 1 832 1 868 0.0 1123
MsG0880042644.01.T01 MTR_8g018510 62.202 881 272 10 1 832 1 869 0.0 1105
MsG0880042644.01.T01 MTR_8g018690 61.975 881 250 9 1 832 1 845 0.0 1097
MsG0880042644.01.T01 MTR_8g018450 62.648 846 275 8 7 832 4 828 0.0 1087
MsG0880042644.01.T01 MTR_2g099570 59.221 873 303 10 1 832 1 861 0.0 1031
MsG0880042644.01.T01 MTR_8g018420 57.276 859 314 9 15 832 10 856 0.0 1003
MsG0880042644.01.T01 MTR_8g018590 59.272 852 279 14 10 832 11 823 0.0 986
MsG0880042644.01.T01 MTR_5g024020 56.307 872 320 13 10 832 8 867 0.0 972
MsG0880042644.01.T01 MTR_2g099560 56.078 872 324 10 6 832 6 863 0.0 967
MsG0880042644.01.T01 MTR_8g018735 54.181 873 336 12 10 832 7 865 0.0 942
MsG0880042644.01.T01 MTR_8g018730 54.400 875 335 12 8 832 4 864 0.0 941
MsG0880042644.01.T01 MTR_8g018730 54.782 847 345 11 8 832 4 834 0.0 925
MsG0880042644.01.T01 MTR_5g024020 54.472 872 300 13 10 832 8 831 0.0 922
MsG0880042644.01.T01 MTR_3g081130 53.287 867 351 10 8 832 4 858 0.0 918
MsG0880042644.01.T01 MTR_3g081130 55.583 797 312 8 66 832 2 786 0.0 897
MsG0880042644.01.T01 MTR_7g113410 51.981 858 358 12 15 832 24 867 0.0 876
MsG0880042644.01.T01 MTR_1g104650 50.634 867 372 11 9 832 3 856 0.0 868
MsG0880042644.01.T01 MTR_1g083020 52.064 872 355 13 7 832 4 858 0.0 865
MsG0880042644.01.T01 MTR_8g018730 57.534 584 216 6 278 832 4 584 0.0 686
MsG0880042644.01.T01 MTR_8g020970 43.452 817 411 12 52 831 124 926 0.0 660
MsG0880042644.01.T01 MTR_8g021020 74.505 404 99 1 433 832 28 431 0.0 646
MsG0880042644.01.T01 MTR_4g066170 43.782 772 392 15 96 832 142 906 0.0 629
MsG0880042644.01.T01 MTR_8g018735 51.768 622 237 11 10 581 7 615 0.0 614
MsG0880042644.01.T01 MTR_3g479460 42.966 789 403 15 82 832 124 903 0.0 612
MsG0880042644.01.T01 MTR_8g011340 43.347 729 357 13 109 795 116 830 0.0 600
MsG0880042644.01.T01 MTR_3g079450 40.920 848 442 17 35 832 64 902 0.0 595
MsG0880042644.01.T01 MTR_8g080230 40.759 817 426 17 65 832 109 916 0.0 577
MsG0880042644.01.T01 MTR_4g088810 39.352 803 443 12 51 831 114 894 0.0 566
MsG0880042644.01.T01 MTR_3g079420 41.697 813 415 17 70 832 62 865 0.0 556
MsG0880042644.01.T01 MTR_6g452500 40.328 610 306 11 248 815 12 605 4.14e-149 452
MsG0880042644.01.T01 MTR_8g020970 41.799 567 279 12 52 581 124 676 3.10e-130 405
MsG0880042644.01.T01 MTR_3g079450 40.569 562 278 15 68 581 97 650 3.35e-119 375
MsG0880042644.01.T01 MTR_7g012030 60.504 119 46 1 484 601 85 203 9.39e-42 152
MsG0880042644.01.T01 MTR_6g046330 54.615 130 47 2 484 601 75 204 1.34e-36 140
MsG0880042644.01.T01 MTR_8g463810 33.468 248 93 6 371 617 181 357 4.92e-33 132
MsG0880042644.01.T01 MTR_3g107560 32.301 226 93 8 609 832 7 174 3.65e-20 89.0
MsG0880042644.01.T01 MTR_2g005920 50.000 60 30 0 705 764 58 117 1.29e-12 65.9
MsG0880042644.01.T01 MTR_4g088805 38.462 91 56 0 741 831 1 91 2.41e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042644.01.T01 AT1G55020 50.867 865 364 14 10 832 14 859 0.0 862
MsG0880042644.01.T01 AT3G22400 50.171 875 370 15 9 832 27 886 0.0 855
MsG0880042644.01.T01 AT1G17420 43.452 817 398 14 69 832 114 919 0.0 657
MsG0880042644.01.T01 AT1G72520 42.336 822 421 13 48 832 121 926 0.0 651
MsG0880042644.01.T01 AT3G45140 41.646 814 418 21 61 832 98 896 0.0 583
MsG0880042644.01.T01 AT3G45140 43.158 760 391 18 107 832 2 754 0.0 580
MsG0880042644.01.T01 AT1G67560 40.754 822 423 17 54 832 117 917 0.0 572

Find 209 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCCTCAACTCCCTTTA+TGG 0.133352 8:-11893038 MsG0880042644.01.T01:three_prime_UTR
CTTCATGCAGCTATTAATTT+TGG 0.141947 8:-11893551 MsG0880042644.01.T01:CDS
TCGCCCAATGTTGGTATTAA+AGG 0.168182 8:+11896864 None:intergenic
AGCTTGTATCGTCCGATTCT+TGG 0.212702 8:-11895883 MsG0880042644.01.T01:CDS
TACGATGTCTACAATGATTT+AGG 0.237255 8:-11895925 MsG0880042644.01.T01:CDS
GCATTTATTCTCCTCAAATA+TGG 0.244167 8:+11894871 None:intergenic
AGGATTGATATCCAACTTTA+TGG 0.249177 8:-11895112 MsG0880042644.01.T01:CDS
AGTAGGAAAGCAAACGGTTT+TGG 0.273580 8:-11896889 MsG0880042644.01.T01:CDS
CAATATGTCCGTTGAGGATA+TGG 0.285751 8:-11896709 MsG0880042644.01.T01:CDS
CATTATGAACATGACCATTA+TGG 0.306288 8:-11893384 MsG0880042644.01.T01:CDS
GCTTGTATCGTCCGATTCTT+GGG 0.307003 8:-11895882 MsG0880042644.01.T01:CDS
CATCCTGATGGTGATAGTTT+TGG 0.309002 8:-11894757 MsG0880042644.01.T01:CDS
GCTTCAACACCTTGACTTGC+AGG 0.312013 8:+11894712 None:intergenic
ATTCCGAGCTCCAAGCATTC+TGG 0.322998 8:-11893691 MsG0880042644.01.T01:CDS
AAACAAAGTTTGTAATTTCA+TGG 0.326999 8:+11896682 None:intergenic
CTAATGATGGACTAGAGATA+TGG 0.328528 8:-11893784 MsG0880042644.01.T01:CDS
TTCTGATGCTTACAAGGATT+GGG 0.333858 8:-11894326 MsG0880042644.01.T01:CDS
AGAGAGTCGAAGGTATTCTT+TGG 0.341357 8:-11893319 MsG0880042644.01.T01:CDS
GACGATACAAGCTAGGATTT+TGG 0.341875 8:+11895893 None:intergenic
CTTCTGATGCTTACAAGGAT+TGG 0.347561 8:-11894327 MsG0880042644.01.T01:CDS
TACTTGGCCTACCTGAGGTT+TGG 0.349098 8:-11893278 MsG0880042644.01.T01:CDS
TGGAGACAAATATCATCAAT+AGG 0.355090 8:-11899203 MsG0880042644.01.T01:CDS
TACTCAGGGGTTCCTTTCTC+AGG 0.359231 8:+11893470 None:intergenic
TAAGCATAAGATGACTTCAT+TGG 0.368930 8:-11899223 MsG0880042644.01.T01:exon
CCCCAGCACATGGGAATTCC+AGG 0.369234 8:-11896777 MsG0880042644.01.T01:CDS
GAAGAGTTGAAGACTTTAAG+AGG 0.376977 8:-11895991 MsG0880042644.01.T01:CDS
CGAACACCATGTGGAGAATC+TGG 0.378960 8:+11893833 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8:-11894501 MsG0880042644.01.T01:CDS
CAAACTTTGTTTGTTACTCA+TGG 0.387722 8:-11896671 MsG0880042644.01.T01:CDS
GGCGTGTAAACATTACTTAC+AGG 0.400011 8:+11894733 None:intergenic
ATGCGATCTTTCCATATTTG+AGG 0.400235 8:-11894882 MsG0880042644.01.T01:CDS
GCATGAAAGCATGACCATAA+AGG 0.402467 8:+11893024 None:intergenic
TGGCCTAGTAATTCATCTCT+TGG 0.402965 8:+11895620 None:intergenic
CATAATGGTCATGTTCATAA+TGG 0.404031 8:+11893385 None:intergenic
CTCCTGGAATTCCCATGTGC+TGG 0.406276 8:+11896775 None:intergenic
ATAGAGTCAACATACTTGTT+TGG 0.412358 8:-11894370 MsG0880042644.01.T01:CDS
ATCTAGAGGAGTGGCTGTTA+AGG 0.415615 8:-11893858 MsG0880042644.01.T01:intron
CTTGTTTGGAAGTTATTCAA+TGG 0.417879 8:-11894356 MsG0880042644.01.T01:CDS
CTTTATCCTTCAAGTGATCC+AGG 0.419657 8:-11893158 MsG0880042644.01.T01:CDS
GCTGCATCACCAACAACATT+GGG 0.420787 8:+11899129 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8:+11894502 None:intergenic
TCCTGGAATTCCCATGTGCT+GGG 0.421859 8:+11896776 None:intergenic
TTCAATTTGGCTGCTTGCCA+AGG 0.425180 8:-11894689 MsG0880042644.01.T01:CDS
TTCTAGATGGAGATACTGTT+GGG 0.425448 8:+11893116 None:intergenic
ATGAATCTTCTGCATTTAGT+TGG 0.428256 8:+11893494 None:intergenic
TCTTGTATGTAGTACACTAA+TGG 0.429054 8:+11896012 None:intergenic
CATGAAAGCATGACCATAAA+GGG 0.429302 8:+11893025 None:intergenic
TGTCATCACAAAACTTTCTT+CGG 0.430407 8:-11895247 MsG0880042644.01.T01:intron
ACTAGTGGTGTTGGAAACTT+TGG 0.430857 8:+11895452 None:intergenic
AAACTTGCACCACCCTCATA+TGG 0.435383 8:-11893586 MsG0880042644.01.T01:CDS
AACTGGAGAGCGCAAGGAAT+GGG 0.437269 8:-11895962 MsG0880042644.01.T01:CDS
AAGGTGTTGAAGCTTCAATT+TGG 0.440030 8:-11894702 MsG0880042644.01.T01:CDS
TTAGTATTTATAGTAGTTGA+TGG 0.440935 8:+11899310 None:intergenic
ATTGTCTTCTGATGCTTACA+AGG 0.442313 8:-11894332 MsG0880042644.01.T01:CDS
CAATAGGGCCACAACTCTAA+AGG 0.444911 8:-11899187 MsG0880042644.01.T01:CDS
GGAACCTTTAATACCAACAT+TGG 0.446209 8:-11896868 MsG0880042644.01.T01:CDS
CAAGCTCTTTCCAGAATGCT+TGG 0.449315 8:+11893681 None:intergenic
AAGGATAATCCTTTATCAAA+AGG 0.454669 8:+11893810 None:intergenic
GAACCTTTAATACCAACATT+GGG 0.454956 8:-11896867 MsG0880042644.01.T01:CDS
GTCAATCCTGGATCACTTGA+AGG 0.455620 8:+11893152 None:intergenic
CCAACACCACTAGTGATTCA+AGG 0.455799 8:-11895443 MsG0880042644.01.T01:intron
AAAACACTTGGAACCATACA+TGG 0.456618 8:-11895065 MsG0880042644.01.T01:CDS
TTTACAAGGGAGATGATTGC+TGG 0.457100 8:-11895282 MsG0880042644.01.T01:CDS
GGAAGTATAAGTTTATGAAT+AGG 0.461780 8:+11894460 None:intergenic
CTGCCAGTTCTACACCTTCG+AGG 0.462687 8:+11895838 None:intergenic
TCAACAAGCTCCTCATACTC+AGG 0.462736 8:+11893455 None:intergenic
GGTTGACAATATCTCCATAA+TGG 0.466064 8:+11893370 None:intergenic
TTGAAGACTTTAAGAGGAGA+TGG 0.467418 8:-11895985 MsG0880042644.01.T01:CDS
TTGAGGAGAATAAATGCAAC+TGG 0.467620 8:-11894865 MsG0880042644.01.T01:CDS
TTTCTAGATGGAGATACTGT+TGG 0.468985 8:+11893115 None:intergenic
TACCCTCGAAGGTGTAGAAC+TGG 0.470127 8:-11895841 MsG0880042644.01.T01:CDS
GGAGACAAATATCATCAATA+GGG 0.470362 8:-11899202 MsG0880042644.01.T01:CDS
GATTATCCTTATGCTAATGA+TGG 0.471024 8:-11893797 MsG0880042644.01.T01:CDS
GGATGGGGTTAGTGTAGAAC+AGG 0.476095 8:-11895044 MsG0880042644.01.T01:intron
GTGTTAAACCCCAATGTTGT+TGG 0.480337 8:-11899138 MsG0880042644.01.T01:CDS
ACTTTAAGAGGAGATGGAAC+TGG 0.480496 8:-11895979 MsG0880042644.01.T01:CDS
AACAAAGTTTGTAATTTCAT+GGG 0.481795 8:+11896683 None:intergenic
TGGATATCAATCCTGCTCTC+TGG 0.482498 8:+11895121 None:intergenic
AATAGGGCCACAACTCTAAA+GGG 0.483458 8:-11899186 MsG0880042644.01.T01:CDS
CCATTCCGACTCTCGATCCC+TGG 0.485030 8:+11895656 None:intergenic
GAAGGATAAAGCACAGTGTA+TGG 0.485574 8:+11893170 None:intergenic
CAAGCTGATTAGTGCTTCCA+TGG 0.486429 8:-11899052 MsG0880042644.01.T01:CDS
GTTCTACACCTTCGAGGGTA+AGG 0.486953 8:+11895844 None:intergenic
TCTCCATCTAGAAAATGTTA+TGG 0.487581 8:-11893106 MsG0880042644.01.T01:exon
ATTCCAAGAGATGAATTACT+AGG 0.491079 8:-11895623 MsG0880042644.01.T01:CDS
AGTGGTGTTGGAAACTTTGG+AGG 0.491168 8:+11895455 None:intergenic
ATCTTCTGCATTTAGTTGGT+CGG 0.493520 8:+11893498 None:intergenic
TAATGATAATGAGCCCTACT+TGG 0.495933 8:-11893294 MsG0880042644.01.T01:CDS
ATGCCTCTGAAAGTCAATCC+TGG 0.497159 8:+11893140 None:intergenic
TACCTAATGATCTAATCAAA+AGG 0.497300 8:-11894285 MsG0880042644.01.T01:intron
CCAACTTTGTTCCAAACCTC+AGG 0.500695 8:+11893267 None:intergenic
AAACCTCAGGTAGGCCAAGT+AGG 0.502023 8:+11893280 None:intergenic
CCTTGAATCACTAGTGGTGT+TGG 0.502285 8:+11895443 None:intergenic
TAATGATGGACTAGAGATAT+GGG 0.502946 8:-11893783 MsG0880042644.01.T01:CDS
CACTTGGAACCATACATGGA+TGG 0.503494 8:-11895061 MsG0880042644.01.T01:CDS
ACACTAACCCCATCCATGTA+TGG 0.504335 8:+11895052 None:intergenic
CATACCAATGGCTAACAAGT+TGG 0.505159 8:+11894635 None:intergenic
GAAAGGAACCCCTGAGTATG+AGG 0.506154 8:-11893465 MsG0880042644.01.T01:CDS
TCTAGTCCATCATTAGCATA+AGG 0.506880 8:+11893791 None:intergenic
CCTGAGGTTTGGAACAAAGT+TGG 0.506969 8:-11893267 MsG0880042644.01.T01:CDS
ATGTGGCACACTTAGTTCAA+TGG 0.506969 8:+11894777 None:intergenic
TATTCTGTCTAACAGGCTCT+CGG 0.513868 8:-11894937 MsG0880042644.01.T01:intron
TTTCCAGAATGCTTGGAGCT+CGG 0.514143 8:+11893688 None:intergenic
ATGACCATAAAGGGAGTTGA+GGG 0.515390 8:+11893034 None:intergenic
AGCTGCATCACCAACAACAT+TGG 0.517241 8:+11899128 None:intergenic
ATCACCAACTTGTTAGCCAT+TGG 0.517356 8:-11894639 MsG0880042644.01.T01:intron
ACTTGGAACCATACATGGAT+GGG 0.517753 8:-11895060 MsG0880042644.01.T01:CDS
AGGCGTTTCCACCAGAGAGC+AGG 0.520052 8:-11895132 MsG0880042644.01.T01:CDS
GTTCTTTATTTACAAAATGA+CGG 0.522167 8:-11894817 MsG0880042644.01.T01:CDS
ACAGTGTATGGCATCTTCAC+AGG 0.526792 8:+11893182 None:intergenic
CTGGCTAGAGATCTTAATTG+AGG 0.527324 8:+11895539 None:intergenic
CACAACTCCCTTTAGAGTTG+TGG 0.529501 8:+11899179 None:intergenic
TGTAAACCTCGTCAGAAACA+TGG 0.531371 8:+11893348 None:intergenic
GAACTGGAGAGCGCAAGGAA+TGG 0.534608 8:-11895963 MsG0880042644.01.T01:CDS
GGACCAAAACTATCACCATC+AGG 0.536018 8:+11894754 None:intergenic
TGGTATTATCACCATAAAGT+TGG 0.536080 8:+11895101 None:intergenic
GTTACCGGAAAAGGAAAAGT+AGG 0.536395 8:-11896906 MsG0880042644.01.T01:CDS
TAGTATTTATAGTAGTTGAT+GGG 0.539427 8:+11899311 None:intergenic
GTGCTGAAGCTATCCATATG+AGG 0.540576 8:+11893573 None:intergenic
TCAAAGGAGTTAAACTCTGG+TGG 0.541788 8:+11895503 None:intergenic
TGAATGGGATCCCCAGCACA+TGG 0.542410 8:-11896787 MsG0880042644.01.T01:CDS
AGAAGATTCATGCCTGAGAA+AGG 0.542748 8:-11893482 MsG0880042644.01.T01:CDS
GATCCAGGATTGACTTTCAG+AGG 0.542922 8:-11893143 MsG0880042644.01.T01:CDS
CTGGAAAGAGCTTGTAGAAG+TGG 0.543538 8:-11893672 MsG0880042644.01.T01:CDS
ATTTACAACAACGTAAGCCT+TGG 0.544836 8:+11894672 None:intergenic
CCAGGGATCGAGAGTCGGAA+TGG 0.547094 8:-11895656 MsG0880042644.01.T01:CDS
TGCCAGTTCTACACCTTCGA+GGG 0.547936 8:+11895839 None:intergenic
TAAATTATTACCATCAGCCA+TGG 0.548168 8:+11899035 None:intergenic
AACCTCAGGTAGGCCAAGTA+GGG 0.549361 8:+11893281 None:intergenic
CTTGTATCGTCCGATTCTTG+GGG 0.555064 8:-11895881 MsG0880042644.01.T01:CDS
TATGGGGTGCTATTAAGTCA+TGG 0.556682 8:-11893766 MsG0880042644.01.T01:CDS
AAGTGAGAGCACTTCATCAA+AGG 0.560945 8:+11895487 None:intergenic
CACAACTCTAAAGGGAGTTG+TGG 0.561678 8:-11899178 MsG0880042644.01.T01:CDS
CATGACCATAAAGGGAGTTG+AGG 0.562329 8:+11893033 None:intergenic
TTGCTTGTTATCTAGAGGAG+TGG 0.563970 8:-11893867 MsG0880042644.01.T01:intron
AGGAAAAGTAGGAAAGCAAA+CGG 0.565465 8:-11896895 MsG0880042644.01.T01:CDS
CAACAAGCTCCTCATACTCA+GGG 0.566761 8:+11893456 None:intergenic
AGATGGAACTGGAGAGCGCA+AGG 0.567592 8:-11895968 MsG0880042644.01.T01:CDS
CCTGGAATTCCCATGTGCTG+GGG 0.568586 8:+11896777 None:intergenic
ATGGGGTGCTATTAAGTCAT+GGG 0.569857 8:-11893765 MsG0880042644.01.T01:CDS
GAAGCTTTGTCGCCCAATGT+TGG 0.571525 8:+11896855 None:intergenic
TCATCAAAGGAGTTAAACTC+TGG 0.578752 8:+11895500 None:intergenic
GCTTTGAATAAAAGATGAGA+AGG 0.580079 8:-11893066 MsG0880042644.01.T01:three_prime_UTR
TTGGAACCTTACATCTCTCA+AGG 0.580286 8:+11895809 None:intergenic
TGACTGATGAGGAATTTACA+AGG 0.582002 8:-11895296 MsG0880042644.01.T01:CDS
AACACAATGAACATAAATGC+CGG 0.582589 8:-11894427 MsG0880042644.01.T01:CDS
GTGTTAACAGCAAAGTCTGA+TGG 0.583665 8:+11895590 None:intergenic
GTTTACACGCCTGCAAGTCA+AGG 0.586583 8:-11894721 MsG0880042644.01.T01:CDS
GATCAAGATATCTCGTGCAC+CGG 0.587350 8:+11894408 None:intergenic
TTGAGCAAAAGCTCATTGAA+AGG 0.587750 8:-11893238 MsG0880042644.01.T01:CDS
CCTTGTCAATATGTCCGTTG+AGG 0.588249 8:-11896715 MsG0880042644.01.T01:CDS
ACAGTATTGTCTAACAAGGT+AGG 0.589939 8:+11899081 None:intergenic
GAGTAGAGGATCGCACTGCA+TGG 0.591932 8:-11895320 MsG0880042644.01.T01:intron
ATATCAATCCTGCTCTCTGG+TGG 0.592228 8:+11895124 None:intergenic
TACATCGGAAAGAGAGTCGA+AGG 0.593503 8:-11893329 MsG0880042644.01.T01:CDS
AATAAATGCAACTGGCGCAA+AGG 0.594218 8:-11894857 MsG0880042644.01.T01:CDS
GTCTAACAAGGTAGGAGGAA+CGG 0.595769 8:+11899089 None:intergenic
TATATATATGATCAGATCCA+GGG 0.595971 8:-11895673 MsG0880042644.01.T01:intron
AGAATCGGACGATACAAGCT+AGG 0.603436 8:+11895886 None:intergenic
ATTAGTGCTTCCATGGCTGA+TGG 0.606063 8:-11899045 MsG0880042644.01.T01:intron
AGATATCTTGATCAATGCTG+AGG 0.607053 8:-11894398 MsG0880042644.01.T01:CDS
GCTAACAAGTTGGTGATATG+TGG 0.609612 8:+11894645 None:intergenic
AGCCCTACTTGGCCTACCTG+AGG 0.610851 8:-11893283 MsG0880042644.01.T01:CDS
GTAAACCTCGTCAGAAACAT+GGG 0.611580 8:+11893349 None:intergenic
TGGAAAGAGCTTGTAGAAGT+GGG 0.612035 8:-11893671 MsG0880042644.01.T01:CDS
AACAAATAGGCATCTTAGTG+TGG 0.616014 8:-11894488 MsG0880042644.01.T01:CDS
GTTTCTGACGAGGTTTACAT+CGG 0.617150 8:-11893344 MsG0880042644.01.T01:CDS
TGCTGAAGCTATCCATATGA+GGG 0.618776 8:+11893574 None:intergenic
CAGATCCAGGGATCGAGAGT+CGG 0.619964 8:-11895661 MsG0880042644.01.T01:CDS
CCACCTCGCCTTACCCTCGA+AGG 0.621630 8:-11895852 MsG0880042644.01.T01:CDS
TTCATTGTGTTGCGATAGTG+CGG 0.623119 8:+11894439 None:intergenic
AATATGGAAAGATCGCATCA+TGG 0.623560 8:+11894887 None:intergenic
AGCTTTGTGTCTTGTAACCG+CGG 0.624297 8:+11899280 None:intergenic
ATGTAGTACACTAATGGAGC+TGG 0.626012 8:+11896018 None:intergenic
GTCAACCCATGTTTCTGACG+AGG 0.626153 8:-11893354 MsG0880042644.01.T01:CDS
ATGGGTTGCCATATCCTCAA+CGG 0.626913 8:+11896701 None:intergenic
AAACTATCACCATCAGGATG+TGG 0.627976 8:+11894760 None:intergenic
TAAATAAAGAACGGTCCTTG+TGG 0.629464 8:+11894828 None:intergenic
GATATCTTGATCAATGCTGA+GGG 0.629783 8:-11894397 MsG0880042644.01.T01:CDS
CTTGGAACCATACATGGATG+GGG 0.630708 8:-11895059 MsG0880042644.01.T01:CDS
CAAAGTCTGATGGTTTCACA+TGG 0.631332 8:+11895600 None:intergenic
GATATACCTTGAATCACTAG+TGG 0.631429 8:+11895437 None:intergenic
TTGTATCGTCCGATTCTTGG+GGG 0.634294 8:-11895880 MsG0880042644.01.T01:CDS
ATCAAAAGGCGAACACCATG+TGG 0.640034 8:+11893824 None:intergenic
CCTTCGAGGGTAAGGCGAGG+TGG 0.644081 8:+11895852 None:intergenic
CTTTGTTCCAAACCTCAGGT+AGG 0.645764 8:+11893271 None:intergenic
TGAGTATGAGGAGCTTGTTG+AGG 0.650300 8:-11893453 MsG0880042644.01.T01:CDS
GAATGGGATCCCCAGCACAT+GGG 0.652656 8:-11896786 MsG0880042644.01.T01:CDS
GCGCAAAGGCTTATGCCACA+AGG 0.657789 8:-11894843 MsG0880042644.01.T01:CDS
TTAGCAATGTATCCACCGTA+CGG 0.657891 8:+11893521 None:intergenic
GTATTGTCTAACAAGGTAGG+AGG 0.658301 8:+11899084 None:intergenic
TTTGGACAATATCCGTACGG+TGG 0.658683 8:-11893533 MsG0880042644.01.T01:CDS
TTTCCTCAGAAGTCCAAACA+TGG 0.659175 8:+11892958 None:intergenic
GGTGATGCAGCTGATAATGA+AGG 0.660588 8:-11899117 MsG0880042644.01.T01:CDS
CTAAGTGTGCCACATCCTGA+TGG 0.663158 8:-11894769 MsG0880042644.01.T01:CDS
CTGCATCACCAACAACATTG+GGG 0.663667 8:+11899130 None:intergenic
TGACACAGTATTGTCTAACA+AGG 0.669490 8:+11899077 None:intergenic
CCTCAACGGACATATTGACA+AGG 0.670098 8:+11896715 None:intergenic
GACTGATGAGGAATTTACAA+GGG 0.671123 8:-11895295 MsG0880042644.01.T01:CDS
AAGGATCCAGATTCTCCACA+TGG 0.679939 8:-11893839 MsG0880042644.01.T01:CDS
ACACTTAGTTCAATGGACAA+CGG 0.688070 8:+11894784 None:intergenic
GAGCTTGTAGAAGTGGGCCA+TGG 0.691948 8:-11893665 MsG0880042644.01.T01:CDS
CACTGCATGGATGACTGATG+AGG 0.693276 8:-11895307 MsG0880042644.01.T01:CDS
TTTGTGTCTTGTAACCGCGG+AGG 0.715386 8:+11899283 None:intergenic
TGAAGCTATCCATATGAGGG+TGG 0.717727 8:+11893577 None:intergenic
AACAAGCTCCTCATACTCAG+GGG 0.722283 8:+11893457 None:intergenic
ACACCTTCGAGGGTAAGGCG+AGG 0.723928 8:+11895849 None:intergenic
AATGATGGACTAGAGATATG+GGG 0.736867 8:-11893782 MsG0880042644.01.T01:CDS
TAAATACTAAGCATCCTCCG+CGG 0.776995 8:-11899297 MsG0880042644.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAATAAAAAAAA+AGG + Chr8:11893610-11893629 None:intergenic 0.0%
!!! ATATTTATTTTTATTTATTT+TGG - Chr8:11896542-11896561 MsG0880042644.01.T01:intron 0.0%
!! ACAAAAATTACTATAAAAAA+AGG + Chr8:11898392-11898411 None:intergenic 10.0%
!! ATCATTATAAGTAAAAAAAT+TGG - Chr8:11894123-11894142 MsG0880042644.01.T01:intron 10.0%
!! ATGAAAAAATAAAGAATTAA+GGG + Chr8:11894396-11894415 None:intergenic 10.0%
!! TTAAAAGAAGATTATAAAAA+TGG - Chr8:11894294-11894313 MsG0880042644.01.T01:CDS 10.0%
!! TTAAAGAAAAAATAATACTT+TGG + Chr8:11895201-11895220 None:intergenic 10.0%
!!! ACAATGATATATATATATTT+TGG - Chr8:11893799-11893818 MsG0880042644.01.T01:CDS 10.0%
!!! TTAATAGTTAAATATTTTGA+AGG - Chr8:11897082-11897101 MsG0880042644.01.T01:intron 10.0%
!!! TTATTTTTAATAAACATCTT+TGG - Chr8:11893627-11893646 MsG0880042644.01.T01:CDS 10.0%
!!! TTTAATTTAAGTGATATTAA+TGG + Chr8:11898356-11898375 None:intergenic 10.0%
!! AAATGACATATAAATAGAAA+TGG + Chr8:11893388-11893407 None:intergenic 15.0%
!! AATAATAACATTTAAGTCTT+TGG + Chr8:11897306-11897325 None:intergenic 15.0%
!! AATGATTCAATATTTATAGA+TGG - Chr8:11894333-11894352 MsG0880042644.01.T01:CDS 15.0%
!! AATTACTATAAAAAAAGGAA+AGG + Chr8:11898387-11898406 None:intergenic 15.0%
!! ATAAAAAGTTATTATTGCAT+TGG + Chr8:11895137-11895156 None:intergenic 15.0%
!! ATTAATAAAATTCATACCAA+TGG + Chr8:11897677-11897696 None:intergenic 15.0%
!! ATTACTATAAAAAAAGGAAA+GGG + Chr8:11898386-11898405 None:intergenic 15.0%
!! CATGAAAAAATAAAGAATTA+AGG + Chr8:11894397-11894416 None:intergenic 15.0%
!! TGAAAAAATAAAGAATTAAG+GGG + Chr8:11894395-11894414 None:intergenic 15.0%
!!! AAATAGTTAGCTTATTAATT+TGG + Chr8:11898245-11898264 None:intergenic 15.0%
!!! ACATTTGTAAAACAAATTTT+CGG + Chr8:11893513-11893532 None:intergenic 15.0%
!!! ATATATATATTTTGGACAAA+GGG - Chr8:11893807-11893826 MsG0880042644.01.T01:CDS 15.0%
!!! CTTTATTTTTGAAAACTAAT+GGG - Chr8:11895018-11895037 MsG0880042644.01.T01:intron 15.0%
!!! TATATATATATTTTGGACAA+AGG - Chr8:11893806-11893825 MsG0880042644.01.T01:CDS 15.0%
!!! TATTTTTAAGATAACTTTTC+AGG + Chr8:11893933-11893952 None:intergenic 15.0%
!!! TCAATGAATGTTTTATTTTT+GGG - Chr8:11895894-11895913 MsG0880042644.01.T01:CDS 15.0%
!!! TCATTTTATTTTCTCATATA+AGG - Chr8:11893542-11893561 MsG0880042644.01.T01:CDS 15.0%
!!! TCTTTATTTTTGAAAACTAA+TGG - Chr8:11895017-11895036 MsG0880042644.01.T01:intron 15.0%
!!! TTCAATGAATGTTTTATTTT+TGG - Chr8:11895893-11895912 MsG0880042644.01.T01:CDS 15.0%
!!! TTTATTTTTTCATGTCATTT+TGG - Chr8:11894403-11894422 MsG0880042644.01.T01:CDS 15.0%
!!! TTTGATATTTTTTATTTCCA+AGG - Chr8:11893990-11894009 MsG0880042644.01.T01:intron 15.0%
!! AAACAAAGTTTGTAATTTCA+TGG + Chr8:11895618-11895637 None:intergenic 20.0%
!! AACAAAGTTTGTAATTTCAT+GGG + Chr8:11895617-11895636 None:intergenic 20.0%
!! AATCAAATAATGTAAGTTCA+TGG - Chr8:11896931-11896950 MsG0880042644.01.T01:intron 20.0%
!! ATAAAAATGTGCTTAGAAAT+AGG + Chr8:11895825-11895844 None:intergenic 20.0%
!! ATATAGTTGTCCATAAATAT+AGG - Chr8:11894086-11894105 MsG0880042644.01.T01:intron 20.0%
!! GATAAAATTGTTTGTGATTT+GGG + Chr8:11896164-11896183 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+GGG + Chr8:11895171-11895190 None:intergenic 20.0%
!! TAAAAATGTGCTTAGAAATA+GGG + Chr8:11895824-11895843 None:intergenic 20.0%
!! TAACACAAGTCAATTATATA+TGG + Chr8:11894619-11894638 None:intergenic 20.0%
!! TACTAATTTAGAAAGTTACA+AGG + Chr8:11896191-11896210 None:intergenic 20.0%
!! TAGTATTTATAGTAGTTGAT+GGG + Chr8:11892989-11893008 None:intergenic 20.0%
!! TGAAATTCATATTCATACAT+GGG + Chr8:11894436-11894455 None:intergenic 20.0%
!! TGATAAAATTGTTTGTGATT+TGG + Chr8:11896165-11896184 None:intergenic 20.0%
!! TGGTGAAATAAAATTTAGAT+AGG + Chr8:11894599-11894618 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + Chr8:11895172-11895191 None:intergenic 20.0%
!! TTAGATAGGAAAGATATTAA+AGG + Chr8:11894585-11894604 None:intergenic 20.0%
!! TTAGTATTTATAGTAGTTGA+TGG + Chr8:11892990-11893009 None:intergenic 20.0%
!! TTGAAATTCATATTCATACA+TGG + Chr8:11894437-11894456 None:intergenic 20.0%
!!! AATCAATGTCTTTCTAAAAA+TGG + Chr8:11898070-11898089 None:intergenic 20.0%
!!! ATTTTACAACTATTCTTGAA+AGG + Chr8:11898331-11898350 None:intergenic 20.0%
!!! GAAAATATTGAAACTTCTTT+TGG + Chr8:11894017-11894036 None:intergenic 20.0%
!!! GTCATTTTGTAAATAAAGAA+CGG + Chr8:11897481-11897500 None:intergenic 20.0%
!!! GTTCTTTATTTACAAAATGA+CGG - Chr8:11897480-11897499 MsG0880042644.01.T01:intron 20.0%
!!! TAAATTTTATTCTGTCTAAC+AGG - Chr8:11897353-11897372 MsG0880042644.01.T01:intron 20.0%
!!! TATATAATTGACTTGTGTTA+AGG - Chr8:11894619-11894638 MsG0880042644.01.T01:intron 20.0%
!!! TATTCACAAATTTGAAATGT+TGG + Chr8:11893966-11893985 None:intergenic 20.0%
!!! TTTCAATATGCATTTTGAAT+GGG - Chr8:11895495-11895514 MsG0880042644.01.T01:CDS 20.0%
!!! TTTGACATTTTTATAGTTAC+CGG - Chr8:11895376-11895395 MsG0880042644.01.T01:intron 20.0%
!!! TTTTTATAATATTGACCGAA+TGG - Chr8:11896098-11896117 MsG0880042644.01.T01:intron 20.0%
! AAATTATCCTAACCAACTAT+TGG + Chr8:11895235-11895254 None:intergenic 25.0%
! AAGGATAATCCTTTATCAAA+AGG + Chr8:11898490-11898509 None:intergenic 25.0%
! AAGTTGTGTATTAAATGCAT+TGG - Chr8:11895978-11895997 MsG0880042644.01.T01:CDS 25.0%
! AATAGTTGGTTAGGATAATT+TGG - Chr8:11895234-11895253 MsG0880042644.01.T01:intron 25.0%
! ACCAATGAATATACCAATAA+AGG - Chr8:11893711-11893730 MsG0880042644.01.T01:CDS 25.0%
! ACCTTTATTGGTATATTCAT+TGG + Chr8:11893715-11893734 None:intergenic 25.0%
! ATCAAAATAAAAGCTCAAGT+TGG + Chr8:11894050-11894069 None:intergenic 25.0%
! ATGAAAAACAAACCAATAGT+TGG - Chr8:11895220-11895239 MsG0880042644.01.T01:intron 25.0%
! CAGAATAAAATTTAGCCATA+TGG + Chr8:11897347-11897366 None:intergenic 25.0%
! CATATAAGGTCTACTTATAA+TGG - Chr8:11893556-11893575 MsG0880042644.01.T01:CDS 25.0%
! CCTTACAAAATATTACATCT+TGG - Chr8:11898038-11898057 MsG0880042644.01.T01:intron 25.0%
! GAGAGTTTAAATAAATTGGT+AGG + Chr8:11893491-11893510 None:intergenic 25.0%
! GATTCAATATTTATAGATGG+AGG - Chr8:11894336-11894355 MsG0880042644.01.T01:CDS 25.0%
! TACCTAATGATCTAATCAAA+AGG - Chr8:11898012-11898031 MsG0880042644.01.T01:intron 25.0%
! TATATATATGATCAGATCCA+GGG - Chr8:11896624-11896643 MsG0880042644.01.T01:CDS 25.0%
! TCAAATTTATGACTTTGTGT+TGG + Chr8:11894519-11894538 None:intergenic 25.0%
! TCAATAAAAACTACCATGTT+TGG - Chr8:11899326-11899345 MsG0880042644.01.T01:five_prime_UTR 25.0%
! TCAATGCATTCCTATATTTA+TGG + Chr8:11894099-11894118 None:intergenic 25.0%
! TCCAATGGTTAAAATTATGT+AGG - Chr8:11896236-11896255 MsG0880042644.01.T01:intron 25.0%
! TGAATATGAATTTCAAGCTT+CGG - Chr8:11894441-11894460 MsG0880042644.01.T01:CDS 25.0%
! TGGATTAAACATGTCTTTAA+GGG - Chr8:11896562-11896581 MsG0880042644.01.T01:intron 25.0%
! TTATATATATGATCAGATCC+AGG - Chr8:11896623-11896642 MsG0880042644.01.T01:CDS 25.0%
! TTATGACAAAATTACTCTTG+TGG - Chr8:11894369-11894388 MsG0880042644.01.T01:CDS 25.0%
! TTCGGAGAGTTTAAATAAAT+TGG + Chr8:11893495-11893514 None:intergenic 25.0%
! TTGGATTAAACATGTCTTTA+AGG - Chr8:11896561-11896580 MsG0880042644.01.T01:intron 25.0%
!! ATGGTAGTTTTTATTGATGA+AGG + Chr8:11899323-11899342 None:intergenic 25.0%
!! ATTTTTATAGTTACCGGAAA+AGG - Chr8:11895382-11895401 MsG0880042644.01.T01:intron 25.0%
!! CCAAGATGTAATATTTTGTA+AGG + Chr8:11898041-11898060 None:intergenic 25.0%
!! CTTTCAATATGCATTTTGAA+TGG - Chr8:11895494-11895513 MsG0880042644.01.T01:CDS 25.0%
!! GGAAGTATAAGTTTATGAAT+AGG + Chr8:11897840-11897859 None:intergenic 25.0%
!!! GGTTTTGTATTTCTATTAGA+CGG - Chr8:11898296-11898315 MsG0880042644.01.T01:intron 25.0%
!!! TACATAATTTTAACCATTGG+AGG + Chr8:11896237-11896256 None:intergenic 25.0%
!!! TACCTTTTGATTAGATCATT+AGG + Chr8:11898017-11898036 None:intergenic 25.0%
!!! TATACCAATAAAGGTACTTT+TGG - Chr8:11893720-11893739 MsG0880042644.01.T01:CDS 25.0%
!!! TTTTAGAAGAGTTTTTGACT+AGG - Chr8:11894678-11894697 MsG0880042644.01.T01:CDS 25.0%
AAACAAACCAATAGTTGGTT+AGG - Chr8:11895225-11895244 MsG0880042644.01.T01:intron 30.0%
AACACAATGAACATAAATGC+CGG - Chr8:11897870-11897889 MsG0880042644.01.T01:intron 30.0%
AGCTTCTTCAGAAAAAACAT+TGG - Chr8:11895459-11895478 MsG0880042644.01.T01:CDS 30.0%
AGGATTGATATCCAACTTTA+TGG - Chr8:11897185-11897204 MsG0880042644.01.T01:intron 30.0%
AGTCATTGAAAAACAGGAAT+GGG - Chr8:11899092-11899111 MsG0880042644.01.T01:CDS 30.0%
ATAGAGTCAACATACTTGTT+TGG - Chr8:11897927-11897946 MsG0880042644.01.T01:intron 30.0%
ATCATTGTAGTATATGCACA+TGG + Chr8:11893787-11893806 None:intergenic 30.0%
ATGAATCTTCTGCATTTAGT+TGG + Chr8:11898806-11898825 None:intergenic 30.0%
ATGATGAGTCATTGAAAAAC+AGG - Chr8:11899086-11899105 MsG0880042644.01.T01:CDS 30.0%
ATGCTAATGATTACTTTCGT+CGG - Chr8:11895723-11895742 MsG0880042644.01.T01:intron 30.0%
ATTCCAAGAGATGAATTACT+AGG - Chr8:11896674-11896693 MsG0880042644.01.T01:CDS 30.0%
ATTGCACACATATTAAGGAA+TGG + Chr8:11895291-11895310 None:intergenic 30.0%
ATTTAGCCATATGGTTCATT+CGG + Chr8:11897338-11897357 None:intergenic 30.0%
CAATTTCCTAATACTCCATT+CGG + Chr8:11896116-11896135 None:intergenic 30.0%
CACAATAACCAAAAAACACT+TGG - Chr8:11897220-11897239 MsG0880042644.01.T01:intron 30.0%
CATAATGGTCATGTTCATAA+TGG + Chr8:11898915-11898934 None:intergenic 30.0%
CATTATGAACATGACCATTA+TGG - Chr8:11898913-11898932 MsG0880042644.01.T01:intron 30.0%
CATTCATCATAGCAACAAAT+AGG - Chr8:11897796-11897815 MsG0880042644.01.T01:intron 30.0%
CTTGTTTGGAAGTTATTCAA+TGG - Chr8:11897941-11897960 MsG0880042644.01.T01:intron 30.0%
GAACCTTTAATACCAACATT+GGG - Chr8:11895430-11895449 MsG0880042644.01.T01:intron 30.0%
GATTATCCTTATGCTAATGA+TGG - Chr8:11898500-11898519 MsG0880042644.01.T01:intron 30.0%
GCATTTATTCTCCTCAAATA+TGG + Chr8:11897429-11897448 None:intergenic 30.0%
GCTTCTTCAGAAAAAACATT+GGG - Chr8:11895460-11895479 MsG0880042644.01.T01:CDS 30.0%
GGAGACAAATATCATCAATA+GGG - Chr8:11893095-11893114 MsG0880042644.01.T01:three_prime_UTR 30.0%
TAAATTATTACCATCAGCCA+TGG + Chr8:11893265-11893284 None:intergenic 30.0%
TAAGCATAAGATGACTTCAT+TGG - Chr8:11893074-11893093 MsG0880042644.01.T01:three_prime_UTR 30.0%
TAATATGAATCGCAACATGT+TGG - Chr8:11894260-11894279 MsG0880042644.01.T01:intron 30.0%
TACGATGTCTACAATGATTT+AGG - Chr8:11896372-11896391 MsG0880042644.01.T01:intron 30.0%
TCCTAGAAGTTGTTATCAAA+TGG + Chr8:11894898-11894917 None:intergenic 30.0%
TCTCATGCTACATTTATAAC+TGG - Chr8:11897110-11897129 MsG0880042644.01.T01:intron 30.0%
TCTCCATCTAGAAAATGTTA+TGG - Chr8:11899191-11899210 MsG0880042644.01.T01:CDS 30.0%
TCTTGTATGTAGTACACTAA+TGG + Chr8:11896288-11896307 None:intergenic 30.0%
TGGAGACAAATATCATCAAT+AGG - Chr8:11893094-11893113 MsG0880042644.01.T01:three_prime_UTR 30.0%
TGGTATTATCACCATAAAGT+TGG + Chr8:11897199-11897218 None:intergenic 30.0%
TGTATATCTACATGTGTGAT+AGG - Chr8:11897748-11897767 MsG0880042644.01.T01:intron 30.0%
TGTCATCACAAAACTTTCTT+CGG - Chr8:11897050-11897069 MsG0880042644.01.T01:intron 30.0%
TTCCTTAATATGTGTGCAAT+TGG - Chr8:11895291-11895310 MsG0880042644.01.T01:CDS 30.0%
! AATTTTGGACAATATCCGTA+CGG - Chr8:11898761-11898780 MsG0880042644.01.T01:intron 30.0%
! ACCATTTGATAACAACTTCT+AGG - Chr8:11894894-11894913 MsG0880042644.01.T01:CDS 30.0%
! ATTTTTCCGAATGAACCATA+TGG - Chr8:11897329-11897348 MsG0880042644.01.T01:intron 30.0%
! CAAACTTTGTTTGTTACTCA+TGG - Chr8:11895626-11895645 MsG0880042644.01.T01:CDS 30.0%
! CTATTTGTTGCTATGATGAA+TGG + Chr8:11897798-11897817 None:intergenic 30.0%
! CTTCATGCAGCTATTAATTT+TGG - Chr8:11898746-11898765 MsG0880042644.01.T01:intron 30.0%
! GCTTTGAATAAAAGATGAGA+AGG - Chr8:11899231-11899250 MsG0880042644.01.T01:exon 30.0%
! TTGTGGTAAGAGTTTAACTT+CGG - Chr8:11898126-11898145 MsG0880042644.01.T01:intron 30.0%
! TTTAAGATTGAGAGCATACA+AGG + Chr8:11894483-11894502 None:intergenic 30.0%
! TTTTCTTTAGCAACAAGGTA+AGG - Chr8:11895683-11895702 MsG0880042644.01.T01:intron 30.0%
!! CATTCCAAAAGTACCTTTAT+TGG + Chr8:11893727-11893746 None:intergenic 30.0%
!! GAAAGTTTTGTGATGACATT+TGG + Chr8:11897048-11897067 None:intergenic 30.0%
!! GCAAAAAGTGCTTACATATA+AGG - Chr8:11895850-11895869 MsG0880042644.01.T01:CDS 30.0%
!! GCCTACATAATTTTAACCAT+TGG + Chr8:11896240-11896259 None:intergenic 30.0%
!! TAATGATGGACTAGAGATAT+GGG - Chr8:11898514-11898533 MsG0880042644.01.T01:intron 30.0%
!!! CAAGTGTTTTTTGGTTATTG+TGG + Chr8:11897222-11897241 None:intergenic 30.0%
AAAACACCTTGAGAGATGTA+AGG - Chr8:11896482-11896501 MsG0880042644.01.T01:intron 35.0%
AAAACACTTGGAACCATACA+TGG - Chr8:11897232-11897251 MsG0880042644.01.T01:intron 35.0%
AAAGCAAGTACCAAATCTTG+TGG - Chr8:11898175-11898194 MsG0880042644.01.T01:intron 35.0%
AACAAATAGGCATCTTAGTG+TGG - Chr8:11897809-11897828 MsG0880042644.01.T01:intron 35.0%
AAGCAAGTACCAAATCTTGT+GGG - Chr8:11898176-11898195 MsG0880042644.01.T01:intron 35.0%
AATATGGAAAGATCGCATCA+TGG + Chr8:11897413-11897432 None:intergenic 35.0%
AATGTGCTTAGAAATAGGGA+CGG + Chr8:11895820-11895839 None:intergenic 35.0%
AATTTCAAGCTTCGGATCTA+TGG - Chr8:11894449-11894468 MsG0880042644.01.T01:CDS 35.0%
ACAAAAAGAATGCAACATGG+TGG - Chr8:11898657-11898676 MsG0880042644.01.T01:intron 35.0%
ACACTTAGTTCAATGGACAA+CGG + Chr8:11897516-11897535 None:intergenic 35.0%
ACAGTATTGTCTAACAAGGT+AGG + Chr8:11893219-11893238 None:intergenic 35.0%
AGATATCTTGATCAATGCTG+AGG - Chr8:11897899-11897918 MsG0880042644.01.T01:intron 35.0%
AGCCAATTGCACACATATTA+AGG + Chr8:11895296-11895315 None:intergenic 35.0%
AGGAAAAGTAGGAAAGCAAA+CGG - Chr8:11895402-11895421 MsG0880042644.01.T01:intron 35.0%
ATCTTCTGCATTTAGTTGGT+CGG + Chr8:11898802-11898821 None:intergenic 35.0%
ATGCGATCTTTCCATATTTG+AGG - Chr8:11897415-11897434 MsG0880042644.01.T01:intron 35.0%
ATTGTCTTCTGATGCTTACA+AGG - Chr8:11897965-11897984 MsG0880042644.01.T01:intron 35.0%
ATTTACAACAACGTAAGCCT+TGG + Chr8:11897628-11897647 None:intergenic 35.0%
CTTTGATACATCATGCAACA+TGG - Chr8:11894788-11894807 MsG0880042644.01.T01:CDS 35.0%
GAAGAGTTGAAGACTTTAAG+AGG - Chr8:11896306-11896325 MsG0880042644.01.T01:intron 35.0%
GACTGATGAGGAATTTACAA+GGG - Chr8:11897002-11897021 MsG0880042644.01.T01:intron 35.0%
GAGTCATTGAAAAACAGGAA+TGG - Chr8:11899091-11899110 MsG0880042644.01.T01:CDS 35.0%
GATATACCTTGAATCACTAG+TGG + Chr8:11896863-11896882 None:intergenic 35.0%
GATATCTTGATCAATGCTGA+GGG - Chr8:11897900-11897919 MsG0880042644.01.T01:intron 35.0%
GGAACCTTTAATACCAACAT+TGG - Chr8:11895429-11895448 MsG0880042644.01.T01:intron 35.0%
GGTTGACAATATCTCCATAA+TGG + Chr8:11898930-11898949 None:intergenic 35.0%
GTGACAAAAAGAATGCAACA+TGG - Chr8:11898654-11898673 MsG0880042644.01.T01:intron 35.0%
TAAATAAAGAACGGTCCTTG+TGG + Chr8:11897472-11897491 None:intergenic 35.0%
TCATCAAAGGAGTTAAACTC+TGG + Chr8:11896800-11896819 None:intergenic 35.0%
TCTAGCTAACTGTTCTAACT+AGG - Chr8:11898275-11898294 MsG0880042644.01.T01:intron 35.0%
TCTAGTCCATCATTAGCATA+AGG + Chr8:11898509-11898528 None:intergenic 35.0%
TCTTCAGAAAAAACATTGGG+AGG - Chr8:11895463-11895482 MsG0880042644.01.T01:CDS 35.0%
TGACACAGTATTGTCTAACA+AGG + Chr8:11893223-11893242 None:intergenic 35.0%
TGACTGATGAGGAATTTACA+AGG - Chr8:11897001-11897020 MsG0880042644.01.T01:intron 35.0%
TGAGAATCAACATACTCCAT+CGG - Chr8:11895049-11895068 MsG0880042644.01.T01:CDS 35.0%
TTAAGGGCTATATACTAGCA+TGG - Chr8:11896578-11896597 MsG0880042644.01.T01:intron 35.0%
TTCTAGATGGAGATACTGTT+GGG + Chr8:11899184-11899203 None:intergenic 35.0%
TTCTCAACATAAAAAGCTCC+TGG + Chr8:11895541-11895560 None:intergenic 35.0%
TTCTGATGCTTACAAGGATT+GGG - Chr8:11897971-11897990 MsG0880042644.01.T01:intron 35.0%
TTGAGCAAAAGCTCATTGAA+AGG - Chr8:11899059-11899078 MsG0880042644.01.T01:CDS 35.0%
TTGAGGAGAATAAATGCAAC+TGG - Chr8:11897432-11897451 MsG0880042644.01.T01:intron 35.0%
TTTCTAGATGGAGATACTGT+TGG + Chr8:11899185-11899204 None:intergenic 35.0%
! ACGCATTTTCTTTAGCAACA+AGG - Chr8:11895678-11895697 MsG0880042644.01.T01:intron 35.0%
! ATTAGATATAGCAAGCACTG+AGG + Chr8:11897143-11897162 None:intergenic 35.0%
! CAGCCATAACATTTTCTAGA+TGG + Chr8:11899197-11899216 None:intergenic 35.0%
! CATGAAAGCATGACCATAAA+GGG + Chr8:11899275-11899294 None:intergenic 35.0%
! TAATGATAATGAGCCCTACT+TGG - Chr8:11899003-11899022 MsG0880042644.01.T01:intron 35.0%
! TATTGACCGAATGGAGTATT+AGG - Chr8:11896107-11896126 MsG0880042644.01.T01:intron 35.0%
! TTGAAACTTCTTTTGGTCCT+TGG + Chr8:11894010-11894029 None:intergenic 35.0%
! TTGAAGACTTTAAGAGGAGA+TGG - Chr8:11896312-11896331 MsG0880042644.01.T01:intron 35.0%
! TTGCATTCTTTTTGTCACCA+TGG + Chr8:11898652-11898671 None:intergenic 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG - Chr8:11897595-11897614 MsG0880042644.01.T01:intron 35.0%
!! AATGATGGACTAGAGATATG+GGG - Chr8:11898515-11898534 MsG0880042644.01.T01:intron 35.0%
!! CTAATGATGGACTAGAGATA+TGG - Chr8:11898513-11898532 MsG0880042644.01.T01:intron 35.0%
!! CTTTCCTACTTTTCCTTTTC+CGG + Chr8:11895398-11895417 None:intergenic 35.0%
!! GTGCTTGCTATATCTAATGT+AGG - Chr8:11897145-11897164 MsG0880042644.01.T01:intron 35.0%
!! TAAAGTGCTTAAAGAGTGTC+CGG + Chr8:11895938-11895957 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG - Chr8:11895321-11895340 MsG0880042644.01.T01:intron 35.0%
!!! GTATGGTTCCAAGTGTTTTT+TGG + Chr8:11897231-11897250 None:intergenic 35.0%
!!! GTGTTTTTTGGTTATTGTGG+TGG + Chr8:11897219-11897238 None:intergenic 35.0%
!!! TGGTGGATTGTTTTGTATTC+TGG + Chr8:11896780-11896799 None:intergenic 35.0%
AAACTATCACCATCAGGATG+TGG + Chr8:11897540-11897559 None:intergenic 40.0%
AATAAATGCAACTGGCGCAA+AGG - Chr8:11897440-11897459 MsG0880042644.01.T01:intron 40.0%
AATAGGGCCACAACTCTAAA+GGG - Chr8:11893111-11893130 MsG0880042644.01.T01:exon 40.0%
ACATGGATGACAAACTGTGT+AGG - Chr8:11894805-11894824 MsG0880042644.01.T01:CDS 40.0%
ACTCCTCTAGATAACAAGCA+AGG + Chr8:11898431-11898450 None:intergenic 40.0%
ACTTGGAACCATACATGGAT+GGG - Chr8:11897237-11897256 MsG0880042644.01.T01:intron 40.0%
AGAAGATTCATGCCTGAGAA+AGG - Chr8:11898815-11898834 MsG0880042644.01.T01:intron 40.0%
AGACATCTTAGAGTGTACGT+GGG + Chr8:11896141-11896160 None:intergenic 40.0%
AGCAAGTACCAAATCTTGTG+GGG - Chr8:11898177-11898196 MsG0880042644.01.T01:intron 40.0%
ATGACCATAAAGGGAGTTGA+GGG + Chr8:11899266-11899285 None:intergenic 40.0%
ATGTAGTACACTAATGGAGC+TGG + Chr8:11896282-11896301 None:intergenic 40.0%
ATGTGGCACACTTAGTTCAA+TGG + Chr8:11897523-11897542 None:intergenic 40.0%
ATTTCCCTCAACTCCCTTTA+TGG - Chr8:11899259-11899278 MsG0880042644.01.T01:five_prime_UTR 40.0%
CAAAAGCTTGATACCTCCAA+TGG - Chr8:11896221-11896240 MsG0880042644.01.T01:intron 40.0%
CAAAGTCTGATGGTTTCACA+TGG + Chr8:11896700-11896719 None:intergenic 40.0%
CAACCTATTCTCTCTTGTGA+TGG - Chr8:11894918-11894937 MsG0880042644.01.T01:CDS 40.0%
CAATATGTCCGTTGAGGATA+TGG - Chr8:11895588-11895607 MsG0880042644.01.T01:CDS 40.0%
CATACCAATGGCTAACAAGT+TGG + Chr8:11897665-11897684 None:intergenic 40.0%
CTCATGAGATGTCAATCTTG+TGG - Chr8:11898109-11898128 MsG0880042644.01.T01:intron 40.0%
CTGGCTAGAGATCTTAATTG+AGG + Chr8:11896761-11896780 None:intergenic 40.0%
CTTCTGATGCTTACAAGGAT+TGG - Chr8:11897970-11897989 MsG0880042644.01.T01:intron 40.0%
CTTTATCCTTCAAGTGATCC+AGG - Chr8:11899139-11899158 MsG0880042644.01.T01:CDS 40.0%
GAAGGATAAAGCACAGTGTA+TGG + Chr8:11899130-11899149 None:intergenic 40.0%
GGCGTGTAAACATTACTTAC+AGG + Chr8:11897567-11897586 None:intergenic 40.0%
GTAAACCTCGTCAGAAACAT+GGG + Chr8:11898951-11898970 None:intergenic 40.0%
GTATTGTCTAACAAGGTAGG+AGG + Chr8:11893216-11893235 None:intergenic 40.0%
GTGTTAAACCCCAATGTTGT+TGG - Chr8:11893159-11893178 MsG0880042644.01.T01:CDS 40.0%
GTGTTAACAGCAAAGTCTGA+TGG + Chr8:11896710-11896729 None:intergenic 40.0%
GTTACCGGAAAAGGAAAAGT+AGG - Chr8:11895391-11895410 MsG0880042644.01.T01:intron 40.0%
GTTTCTGACGAGGTTTACAT+CGG - Chr8:11898953-11898972 MsG0880042644.01.T01:intron 40.0%
GTTTGAAAGTCCGTATGTGT+AGG - Chr8:11894540-11894559 MsG0880042644.01.T01:intron 40.0%
TAAATACTAAGCATCCTCCG+CGG - Chr8:11893000-11893019 MsG0880042644.01.T01:three_prime_UTR 40.0%
TATTCTGTCTAACAGGCTCT+CGG - Chr8:11897360-11897379 MsG0880042644.01.T01:intron 40.0%
TCAAAGGAGTTAAACTCTGG+TGG + Chr8:11896797-11896816 None:intergenic 40.0%
TCGCCCAATGTTGGTATTAA+AGG + Chr8:11895436-11895455 None:intergenic 40.0%
TCTCCATCACAAGAGAGAAT+AGG + Chr8:11894924-11894943 None:intergenic 40.0%
TGATCCTTCACCTACACATA+CGG + Chr8:11894553-11894572 None:intergenic 40.0%
TGCAAACAGACACAAGTGTT+TGG + Chr8:11896510-11896529 None:intergenic 40.0%
TGCAAGAGTCAAAATTCGAC+CGG + Chr8:11893453-11893472 None:intergenic 40.0%
TGCTGAAGCTATCCATATGA+GGG + Chr8:11898726-11898745 None:intergenic 40.0%
TGGAAAGAGCTTGTAGAAGT+GGG - Chr8:11898626-11898645 MsG0880042644.01.T01:intron 40.0%
TGGCCTAGTAATTCATCTCT+TGG + Chr8:11896680-11896699 None:intergenic 40.0%
TGTAAACCTCGTCAGAAACA+TGG + Chr8:11898952-11898971 None:intergenic 40.0%
TTAGCAATGTATCCACCGTA+CGG + Chr8:11898779-11898798 None:intergenic 40.0%
TTCATTGTGTTGCGATAGTG+CGG + Chr8:11897861-11897880 None:intergenic 40.0%
TTCGTTCTCTACTACCTCTA+AGG + Chr8:11898154-11898173 None:intergenic 40.0%
TTGGAACCTTACATCTCTCA+AGG + Chr8:11896491-11896510 None:intergenic 40.0%
TTTACAAGGGAGATGATTGC+TGG - Chr8:11897015-11897034 MsG0880042644.01.T01:intron 40.0%
! AATGGAGCTGGTGTTTTACT+TGG + Chr8:11896270-11896289 None:intergenic 40.0%
! ACTAGTGGTGTTGGAAACTT+TGG + Chr8:11896848-11896867 None:intergenic 40.0%
! ACTTTAAGAGGAGATGGAAC+TGG - Chr8:11896318-11896337 MsG0880042644.01.T01:intron 40.0%
! AGTAGGAAAGCAAACGGTTT+TGG - Chr8:11895408-11895427 MsG0880042644.01.T01:intron 40.0%
! CATTGAAGAAGTAGAGTGTC+CGG - Chr8:11893431-11893450 MsG0880042644.01.T01:CDS 40.0%
! GACGATACAAGCTAGGATTT+TGG + Chr8:11896407-11896426 None:intergenic 40.0%
! GATTGGGTTTTCACTGAACA+AGG - Chr8:11897987-11898006 MsG0880042644.01.T01:intron 40.0%
! GCATGAAAGCATGACCATAA+AGG + Chr8:11899276-11899295 None:intergenic 40.0%
! GTTTAACTTCGGATCCTTAG+AGG - Chr8:11898137-11898156 MsG0880042644.01.T01:intron 40.0%
! TGGTGTTCGCCTTTTGATAA+AGG - Chr8:11898478-11898497 MsG0880042644.01.T01:intron 40.0%
!! AAAGTGCTTAAAGAGTGTCC+GGG + Chr8:11895937-11895956 None:intergenic 40.0%
!! AAGTGAGAGCACTTCATCAA+AGG + Chr8:11896813-11896832 None:intergenic 40.0%
!! AGAGAGTCGAAGGTATTCTT+TGG - Chr8:11898978-11898997 MsG0880042644.01.T01:intron 40.0%
!! ATCACCAACTTGTTAGCCAT+TGG - Chr8:11897658-11897677 MsG0880042644.01.T01:intron 40.0%
!! ATGGGGTGCTATTAAGTCAT+GGG - Chr8:11898532-11898551 MsG0880042644.01.T01:intron 40.0%
!! CATCCTGATGGTGATAGTTT+TGG - Chr8:11897540-11897559 MsG0880042644.01.T01:intron 40.0%
!! CTTCCTTGCTTGTTATCTAG+AGG - Chr8:11898425-11898444 MsG0880042644.01.T01:intron 40.0%
!! GATGAAGTGCTCTCACTTTT+TGG - Chr8:11896815-11896834 MsG0880042644.01.T01:CDS 40.0%
!! GCTAACAAGTTGGTGATATG+TGG + Chr8:11897655-11897674 None:intergenic 40.0%
!! TACAAGCTAGGATTTTGGTC+TGG + Chr8:11896402-11896421 None:intergenic 40.0%
!! TATGGGGTGCTATTAAGTCA+TGG - Chr8:11898531-11898550 MsG0880042644.01.T01:intron 40.0%
!! TTGCTTGTTATCTAGAGGAG+TGG - Chr8:11898430-11898449 MsG0880042644.01.T01:intron 40.0%
!!! CATTGGAGGTATCAAGCTTT+TGG + Chr8:11896223-11896242 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACAG+AGG - Chr8:11895320-11895339 MsG0880042644.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACCGA+TGG + Chr8:11895068-11895087 None:intergenic 40.0%
AAACTTGCACCACCCTCATA+TGG - Chr8:11898711-11898730 MsG0880042644.01.T01:intron 45.0%
AACAAGCTCCTCATACTCAG+GGG + Chr8:11898843-11898862 None:intergenic 45.0%
AAGGATCCAGATTCTCCACA+TGG - Chr8:11898458-11898477 MsG0880042644.01.T01:intron 45.0%
AAGTCCGTATGTGTAGGTGA+AGG - Chr8:11894546-11894565 MsG0880042644.01.T01:intron 45.0%
ACACTAACCCCATCCATGTA+TGG + Chr8:11897248-11897267 None:intergenic 45.0%
ACAGTGTATGGCATCTTCAC+AGG + Chr8:11899118-11899137 None:intergenic 45.0%
AGAATCGGACGATACAAGCT+AGG + Chr8:11896414-11896433 None:intergenic 45.0%
AGCTGCATCACCAACAACAT+TGG + Chr8:11893172-11893191 None:intergenic 45.0%
AGCTTGTATCGTCCGATTCT+TGG - Chr8:11896414-11896433 MsG0880042644.01.T01:intron 45.0%
ATATCAATCCTGCTCTCTGG+TGG + Chr8:11897176-11897195 None:intergenic 45.0%
ATCAAAAGGCGAACACCATG+TGG + Chr8:11898476-11898495 None:intergenic 45.0%
ATCTAGAGGAGTGGCTGTTA+AGG - Chr8:11898439-11898458 MsG0880042644.01.T01:intron 45.0%
ATTAGTGCTTCCATGGCTGA+TGG - Chr8:11893252-11893271 MsG0880042644.01.T01:CDS 45.0%
CAACAAGCTCCTCATACTCA+GGG + Chr8:11898844-11898863 None:intergenic 45.0%
CAAGCTCTTTCCAGAATGCT+TGG + Chr8:11898619-11898638 None:intergenic 45.0%
CAAGCTGATTAGTGCTTCCA+TGG - Chr8:11893245-11893264 MsG0880042644.01.T01:CDS 45.0%
CAATAGGGCCACAACTCTAA+AGG - Chr8:11893110-11893129 MsG0880042644.01.T01:exon 45.0%
CACTTGGAACCATACATGGA+TGG - Chr8:11897236-11897255 MsG0880042644.01.T01:intron 45.0%
CATGACCATAAAGGGAGTTG+AGG + Chr8:11899267-11899286 None:intergenic 45.0%
CCAACACCACTAGTGATTCA+AGG - Chr8:11896854-11896873 MsG0880042644.01.T01:CDS 45.0%
CCAACTTTGTTCCAAACCTC+AGG + Chr8:11899033-11899052 None:intergenic 45.0%
CCTCAACGGACATATTGACA+AGG + Chr8:11895585-11895604 None:intergenic 45.0%
CCTTGAATCACTAGTGGTGT+TGG + Chr8:11896857-11896876 None:intergenic 45.0%
CCTTGTCAATATGTCCGTTG+AGG - Chr8:11895582-11895601 MsG0880042644.01.T01:CDS 45.0%
CTGCATCACCAACAACATTG+GGG + Chr8:11893170-11893189 None:intergenic 45.0%
CTGGAAAGAGCTTGTAGAAG+TGG - Chr8:11898625-11898644 MsG0880042644.01.T01:intron 45.0%
CTTGGAACCATACATGGATG+GGG - Chr8:11897238-11897257 MsG0880042644.01.T01:intron 45.0%
CTTGTATCGTCCGATTCTTG+GGG - Chr8:11896416-11896435 MsG0880042644.01.T01:intron 45.0%
CTTTGTTCCAAACCTCAGGT+AGG + Chr8:11899029-11899048 None:intergenic 45.0%
GAGACATCTTAGAGTGTACG+TGG + Chr8:11896142-11896161 None:intergenic 45.0%
GATCAAGATATCTCGTGCAC+CGG + Chr8:11897892-11897911 None:intergenic 45.0%
GCTGCATCACCAACAACATT+GGG + Chr8:11893171-11893190 None:intergenic 45.0%
GCTTGTATCGTCCGATTCTT+GGG - Chr8:11896415-11896434 MsG0880042644.01.T01:intron 45.0%
GGACCAAAACTATCACCATC+AGG + Chr8:11897546-11897565 None:intergenic 45.0%
GTCAATCCTGGATCACTTGA+AGG + Chr8:11899148-11899167 None:intergenic 45.0%
GTCTAACAAGGTAGGAGGAA+CGG + Chr8:11893211-11893230 None:intergenic 45.0%
GTGCTGAAGCTATCCATATG+AGG + Chr8:11898727-11898746 None:intergenic 45.0%
TACATCGGAAAGAGAGTCGA+AGG - Chr8:11898968-11898987 MsG0880042644.01.T01:intron 45.0%
TCAACAAGCTCCTCATACTC+AGG + Chr8:11898845-11898864 None:intergenic 45.0%
TCACAAAGCCCCACAAGATT+TGG + Chr8:11898188-11898207 None:intergenic 45.0%
TGAAGCTATCCATATGAGGG+TGG + Chr8:11898723-11898742 None:intergenic 45.0%
TGGATATCAATCCTGCTCTC+TGG + Chr8:11897179-11897198 None:intergenic 45.0%
TTCAATTTGGCTGCTTGCCA+AGG - Chr8:11897608-11897627 MsG0880042644.01.T01:intron 45.0%
TTGTATCGTCCGATTCTTGG+GGG - Chr8:11896417-11896436 MsG0880042644.01.T01:intron 45.0%
TTTCCAGAATGCTTGGAGCT+CGG + Chr8:11898612-11898631 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+TGG - Chr8:11898764-11898783 MsG0880042644.01.T01:intron 45.0%
! AGCTTTGTGTCTTGTAACCG+CGG + Chr8:11893020-11893039 None:intergenic 45.0%
! AGTGGTGTTGGAAACTTTGG+AGG + Chr8:11896845-11896864 None:intergenic 45.0%
! ATGCCTCTGAAAGTCAATCC+TGG + Chr8:11899160-11899179 None:intergenic 45.0%
! ATGGGTTGCCATATCCTCAA+CGG + Chr8:11895599-11895618 None:intergenic 45.0%
! CACAACTCTAAAGGGAGTTG+TGG - Chr8:11893119-11893138 MsG0880042644.01.T01:CDS 45.0%
! CCTGAGGTTTGGAACAAAGT+TGG - Chr8:11899030-11899049 MsG0880042644.01.T01:intron 45.0%
! CTTGTGGGGCTTTGTGATTT+GGG - Chr8:11898191-11898210 MsG0880042644.01.T01:intron 45.0%
! GAGCTGGTGTTTTACTTGGA+AGG + Chr8:11896266-11896285 None:intergenic 45.0%
! GATCCAGGATTGACTTTCAG+AGG - Chr8:11899154-11899173 MsG0880042644.01.T01:CDS 45.0%
! GGTGATGCAGCTGATAATGA+AGG - Chr8:11893180-11893199 MsG0880042644.01.T01:CDS 45.0%
! TCTTGTGGGGCTTTGTGATT+TGG - Chr8:11898190-11898209 MsG0880042644.01.T01:intron 45.0%
! TTGTGGGGCTTTGTGATTTG+GGG - Chr8:11898192-11898211 MsG0880042644.01.T01:intron 45.0%
!! AAGTGCTTAAAGAGTGTCCG+GGG + Chr8:11895936-11895955 None:intergenic 45.0%
!! CACAACTCCCTTTAGAGTTG+TGG + Chr8:11893121-11893140 None:intergenic 45.0%
!! TGAGTATGAGGAGCTTGTTG+AGG - Chr8:11898844-11898863 MsG0880042644.01.T01:intron 45.0%
!! ATTATAAAAAAGTAAATAAA+GGG + Chr8:11896088-11896107 None:intergenic 5.0%
!! ATTTATAATGATAAAAAAAA+CGG + Chr8:11894727-11894746 None:intergenic 5.0%
!! TATTATAAAAAAGTAAATAA+AGG + Chr8:11896089-11896108 None:intergenic 5.0%
!!! AAAAAATAATTACTAATTTT+AGG - Chr8:11896024-11896043 MsG0880042644.01.T01:CDS 5.0%
!!! TATATAATTAAATATTTTGT+AGG + Chr8:11896908-11896927 None:intergenic 5.0%
!!! TTTTTTAAATTTTTATTTTG+AGG - Chr8:11894856-11894875 MsG0880042644.01.T01:CDS 5.0%
AAACCTCAGGTAGGCCAAGT+AGG + Chr8:11899020-11899039 None:intergenic 50.0%
AACCTCAGGTAGGCCAAGTA+GGG + Chr8:11899019-11899038 None:intergenic 50.0%
ATTCCGAGCTCCAAGCATTC+TGG - Chr8:11898606-11898625 MsG0880042644.01.T01:intron 50.0%
CACTGCATGGATGACTGATG+AGG - Chr8:11896990-11897009 MsG0880042644.01.T01:intron 50.0%
CGAACACCATGTGGAGAATC+TGG + Chr8:11898467-11898486 None:intergenic 50.0%
CTAAGTGTGCCACATCCTGA+TGG - Chr8:11897528-11897547 MsG0880042644.01.T01:intron 50.0%
GAAAGGAACCCCTGAGTATG+AGG - Chr8:11898832-11898851 MsG0880042644.01.T01:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG - Chr8:11895916-11895935 MsG0880042644.01.T01:CDS 50.0%
GTGGTTGATCCCCCAAGAAT+CGG + Chr8:11896429-11896448 None:intergenic 50.0%
GTTCTACACCTTCGAGGGTA+AGG + Chr8:11896456-11896475 None:intergenic 50.0%
GTTTACACGCCTGCAAGTCA+AGG - Chr8:11897576-11897595 MsG0880042644.01.T01:intron 50.0%
TACTCAGGGGTTCCTTTCTC+AGG + Chr8:11898830-11898849 None:intergenic 50.0%
TACTTGGCCTACCTGAGGTT+TGG - Chr8:11899019-11899038 MsG0880042644.01.T01:intron 50.0%
TCCTGGAATTCCCATGTGCT+GGG + Chr8:11895524-11895543 None:intergenic 50.0%
TGCCAGTTCTACACCTTCGA+GGG + Chr8:11896461-11896480 None:intergenic 50.0%
TTTGTGTCTTGTAACCGCGG+AGG + Chr8:11893017-11893036 None:intergenic 50.0%
! AACTGGAGAGCGCAAGGAAT+GGG - Chr8:11896335-11896354 MsG0880042644.01.T01:intron 50.0%
! GAAGCTTTGTCGCCCAATGT+TGG + Chr8:11895445-11895464 None:intergenic 50.0%
! GGATGGGGTTAGTGTAGAAC+AGG - Chr8:11897253-11897272 MsG0880042644.01.T01:intron 50.0%
! GTCAACCCATGTTTCTGACG+AGG - Chr8:11898943-11898962 MsG0880042644.01.T01:intron 50.0%
! TACCCTCGAAGGTGTAGAAC+TGG - Chr8:11896456-11896475 MsG0880042644.01.T01:intron 50.0%
!! AGGATGCTTAAAGAGTGCCC+CGG - Chr8:11896044-11896063 MsG0880042644.01.T01:intron 50.0%
!! AGTGCTTAAAGAGTGTCCGG+GGG + Chr8:11895935-11895954 None:intergenic 50.0%
!! GCTTCAACACCTTGACTTGC+AGG + Chr8:11897588-11897607 None:intergenic 50.0%
CAGATCCAGGGATCGAGAGT+CGG - Chr8:11896636-11896655 MsG0880042644.01.T01:CDS 55.0%
CCTGGAATTCCCATGTGCTG+GGG + Chr8:11895523-11895542 None:intergenic 55.0%
CTCCTGGAATTCCCATGTGC+TGG + Chr8:11895525-11895544 None:intergenic 55.0%
CTGCCAGTTCTACACCTTCG+AGG + Chr8:11896462-11896481 None:intergenic 55.0%
GAATGGGATCCCCAGCACAT+GGG - Chr8:11895511-11895530 MsG0880042644.01.T01:CDS 55.0%
GAGCTTGTAGAAGTGGGCCA+TGG - Chr8:11898632-11898651 MsG0880042644.01.T01:intron 55.0%
GAGTAGAGGATCGCACTGCA+TGG - Chr8:11896977-11896996 MsG0880042644.01.T01:intron 55.0%
GCGCAAAGGCTTATGCCACA+AGG - Chr8:11897454-11897473 MsG0880042644.01.T01:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + Chr8:11896065-11896084 None:intergenic 55.0%
TGAATGGGATCCCCAGCACA+TGG - Chr8:11895510-11895529 MsG0880042644.01.T01:CDS 55.0%
! AGATGGAACTGGAGAGCGCA+AGG - Chr8:11896329-11896348 MsG0880042644.01.T01:intron 55.0%
! GAACTGGAGAGCGCAAGGAA+TGG - Chr8:11896334-11896353 MsG0880042644.01.T01:intron 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + Chr8:11896066-11896085 None:intergenic 55.0%
!! ATGCTTAAAGAGTGCCCCGG+GGG - Chr8:11896047-11896066 MsG0880042644.01.T01:intron 55.0%
!! GATGCTTAAAGAGTGCCCCG+GGG - Chr8:11896046-11896065 MsG0880042644.01.T01:intron 55.0%
!! GGATGCTTAAAGAGTGCCCC+GGG - Chr8:11896045-11896064 MsG0880042644.01.T01:intron 55.0%
ACACCTTCGAGGGTAAGGCG+AGG + Chr8:11896451-11896470 None:intergenic 60.0%
AGCCCTACTTGGCCTACCTG+AGG - Chr8:11899014-11899033 MsG0880042644.01.T01:intron 60.0%
AGGCGTTTCCACCAGAGAGC+AGG - Chr8:11897165-11897184 MsG0880042644.01.T01:intron 60.0%
CCAGGGATCGAGAGTCGGAA+TGG - Chr8:11896641-11896660 MsG0880042644.01.T01:CDS 60.0%
CCATTCCGACTCTCGATCCC+TGG + Chr8:11896644-11896663 None:intergenic 60.0%
CCCCAGCACATGGGAATTCC+AGG - Chr8:11895520-11895539 MsG0880042644.01.T01:CDS 60.0%
CTTGTTAACGAGTGCCCCCG+GGG + Chr8:11896064-11896083 None:intergenic 60.0%
CCACCTCGCCTTACCCTCGA+AGG - Chr8:11896445-11896464 MsG0880042644.01.T01:intron 65.0%
CCTTCGAGGGTAAGGCGAGG+TGG + Chr8:11896448-11896467 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 11892965 11899354 11892965 ID=MsG0880042644.01;Name=MsG0880042644.01
Chr8 mRNA 11892965 11899354 11892965 ID=MsG0880042644.01.T01;Parent=MsG0880042644.01;Name=MsG0880042644.01.T01;_AED=0.49;_eAED=0.49;_QI=119|1|1|1|1|1|9|153|832
Chr8 exon 11892965 11893874 11892965 ID=MsG0880042644.01.T01:exon:3599;Parent=MsG0880042644.01.T01
Chr8 exon 11894286 11894549 11894286 ID=MsG0880042644.01.T01:exon:3598;Parent=MsG0880042644.01.T01
Chr8 exon 11894640 11894944 11894640 ID=MsG0880042644.01.T01:exon:3597;Parent=MsG0880042644.01.T01
Chr8 exon 11895045 11895152 11895045 ID=MsG0880042644.01.T01:exon:3596;Parent=MsG0880042644.01.T01
Chr8 exon 11895248 11895336 11895248 ID=MsG0880042644.01.T01:exon:3595;Parent=MsG0880042644.01.T01
Chr8 exon 11895444 11895680 11895444 ID=MsG0880042644.01.T01:exon:3594;Parent=MsG0880042644.01.T01
Chr8 exon 11895821 11896061 11895821 ID=MsG0880042644.01.T01:exon:3593;Parent=MsG0880042644.01.T01
Chr8 exon 11896620 11896927 11896620 ID=MsG0880042644.01.T01:exon:3592;Parent=MsG0880042644.01.T01
Chr8 exon 11899046 11899354 11899046 ID=MsG0880042644.01.T01:exon:3591;Parent=MsG0880042644.01.T01
Chr8 five_prime_UTR 11899236 11899354 11899236 ID=MsG0880042644.01.T01:five_prime_utr;Parent=MsG0880042644.01.T01
Chr8 CDS 11899046 11899235 11899046 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11896620 11896927 11896620 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11895821 11896061 11895821 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11895444 11895680 11895444 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11895248 11895336 11895248 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11895045 11895152 11895045 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11894640 11894944 11894640 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11894286 11894549 11894286 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 CDS 11893118 11893874 11893118 ID=MsG0880042644.01.T01:cds;Parent=MsG0880042644.01.T01
Chr8 three_prime_UTR 11892965 11893117 11892965 ID=MsG0880042644.01.T01:three_prime_utr;Parent=MsG0880042644.01.T01
Gene Sequence

>MsG0880042644.01.T01

ATGACTTCATTGGAGACAAATATCATCAATAGGGCCACAACTCTAAAGGGAGTTGTGGTTTTGAAGCTAAAGAATGTGTTAAACCCCAATGTTGTTGGTGATGCAGCTGATAATGAAGGTGATACCGTTCCTCCTACCTTGTTAGACAATACTGTGTCATTCAAGCTGATTAGTGCTTCCATGGCTGATGTTACCGGAAAAGGAAAAGTAGGAAAGCAAACGGTTTTGGAACCTTTAATACCAACATTGGGCGACAAAGCTTCTTCAGAAAAAACATTGGGAGGCGAAATTGCTTTCAATATGCATTTTGAATGGGATCCCCAGCACATGGGAATTCCAGGAGCTTTTTATGTTGAGAATTTTATGCAAGATGAATTCTTCCTTGTCAATATGTCCGTTGAGGATATGGCAACCCATGAAATTACAAACTTTGTTTGTTACTCATGGATTTACAATGCTCAAAATTACAAAACTGAACGCATTTTCTTTAGCAACAAGGCATACCTTCCAAGTAAAACACCAGCTCCATTAGTGTACTACATACAAGAAGAGTTGAAGACTTTAAGAGGAGATGGAACTGGAGAGCGCAAGGAATGGGAAAGAATATATGATTACGATGTCTACAATGATTTAGGTCAGCCAGACCAAAATCCTAGCTTGTATCGTCCGATTCTTGGGGGATCAACCACCTCGCCTTACCCTCGAAGGTGTAGAACTGGCAGAAAACACCTTGAGAGATATCCAGGGATCGAGAGTCGGAATGGATATTTTTACATTCCAAGAGATGAATTACTAGGCCATGTGAAACCATCAGACTTTGCTGTTAACACACTCAAATCAGCATCTGAATATGACACACCTCAATTAAGATCTCTAGCCAGAATACAAAACAATCCACCAGAGTTTAACTCCTTTGATGAAGTGCTCTCACTTTTTGGTGAACCTCCAAAGTTTCCAACACCACTAGTGATTCAAGAGGATCGCACTGCATGGATGACTGATGAGGAATTTACAAGGGAGATGATTGCTGGTGTGAATCCAAATGTCATCACAAAACTTTCTTCGGCGTTTCCACCAGAGAGCAGGATTGATATCCAACTTTATGGTGATAATACCACCACAATAACCAAAAAACACTTGGAACCATACATGGATGGGGTTAGTGTAGAACAGGCTCTCGGAGACAATAGATTATACATACTTGATCACCATGATGCGATCTTTCCATATTTGAGGAGAATAAATGCAACTGGCGCAAAGGCTTATGCCACAAGGACCGTTCTTTATTTACAAAATGACGGAACTTTGAAGCCGTTGTCCATTGAACTAAGTGTGCCACATCCTGATGGTGATAGTTTTGGTCCTGTAAGTAATGTTTACACGCCTGCAAGTCAAGGTGTTGAAGCTTCAATTTGGCTGCTTGCCAAGGCTTACGTTGTTGTAAATGATGCCACATATCACCAACTTGTTAGCCATTGGTTGAACACTCATGCTACTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAACTTATACTTCCGCACTATCGCAACACAATGAACATAAATGCCGGTGCACGAGATATCTTGATCAATGCTGAGGGTATTATAGAGTCAACATACTTGTTTGGAAGTTATTCAATGGAATTGTCTTCTGATGCTTACAAGGATTGGGTTTTCACTGAACAAGGACTACCTAATGATCTAATCAAAAGAGGAGTGGCTGTTAAGGATCCAGATTCTCCACATGGTGTTCGCCTTTTGATAAAGGATTATCCTTATGCTAATGATGGACTAGAGATATGGGGTGCTATTAAGTCATGGGTTGAAGAATATGTAAATTTCTATTACAAGTTAGATGCAGATATTGAAGAAGATTCCGAGCTCCAAGCATTCTGGAAAGAGCTTGTAGAAGTGGGCCATGGTGACAAAAAGAATGCAACATGGTGGTTTAAGATGCAAAATCGTTCAGAGTTGATTGAAACTTGCACCACCCTCATATGGATAGCTTCAGCACTTCATGCAGCTATTAATTTTGGACAATATCCGTACGGTGGATACATTGCTAACCGACCAACTAAATGCAGAAGATTCATGCCTGAGAAAGGAACCCCTGAGTATGAGGAGCTTGTTGAGGACTACGAGAAAGCGTATTTGAAGACAATCACAACAATGACAGATACCATTATGAACATGACCATTATGGAGATATTGTCAACCCATGTTTCTGACGAGGTTTACATCGGAAAGAGAGTCGAAGGTATTCTTTGGACTAATGATAATGAGCCCTACTTGGCCTACCTGAGGTTTGGAACAAAGTTGGCTGAAATTGAGCAAAAGCTCATTGAAAGGAACAATGATGAGTCATTGAAAAACAGGAATGGGCCTGTGAAGATGCCATACACTGTGCTTTATCCTTCAAGTGATCCAGGATTGACTTTCAGAGGCATTCCCAACAGTATCTCCATCTAG
Protein sequence

>MsG0880042644.01.T01

MTSLETNIINRATTLKGVVVLKLKNVLNPNVVGDAADNEGDTVPPTLLDNTVSFKLISASMADVTGKGKVGKQTVLEPLIPTLGDKASSEKTLGGEIAFNMHFEWDPQHMGIPGAFYVENFMQDEFFLVNMSVEDMATHEITNFVCYSWIYNAQNYKTERIFFSNKAYLPSKTPAPLVYYIQEELKTLRGDGTGERKEWERIYDYDVYNDLGQPDQNPSLYRPILGGSTTSPYPRRCRTGRKHLERYPGIESRNGYFYIPRDELLGHVKPSDFAVNTLKSASEYDTPQLRSLARIQNNPPEFNSFDEVLSLFGEPPKFPTPLVIQEDRTAWMTDEEFTREMIAGVNPNVITKLSSAFPPESRIDIQLYGDNTTTITKKHLEPYMDGVSVEQALGDNRLYILDHHDAIFPYLRRINATGAKAYATRTVLYLQNDGTLKPLSIELSVPHPDGDSFGPVSNVYTPASQGVEASIWLLAKAYVVVNDATYHQLVSHWLNTHATVEPFIIATNRHLSVVHPIHKLILPHYRNTMNINAGARDILINAEGIIESTYLFGSYSMELSSDAYKDWVFTEQGLPNDLIKRGVAVKDPDSPHGVRLLIKDYPYANDGLEIWGAIKSWVEEYVNFYYKLDADIEEDSELQAFWKELVEVGHGDKKNATWWFKMQNRSELIETCTTLIWIASALHAAINFGQYPYGGYIANRPTKCRRFMPEKGTPEYEELVEDYEKAYLKTITTMTDTIMNMTIMEILSTHVSDEVYIGKRVEGILWTNDNEPYLAYLRFGTKLAEIEQKLIERNNDESLKNRNGPVKMPYTVLYPSSDPGLTFRGIPNSISI*