AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042633.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042633.01.T01 MTR_8g018550 91.359 868 34 2 1 827 1 868 0.0 1628
MsG0880042633.01.T01 MTR_8g018570 82.299 870 111 4 1 827 1 870 0.0 1482
MsG0880042633.01.T01 MTR_8g020990 80.645 868 127 2 1 827 1 868 0.0 1434
MsG0880042633.01.T01 MTR_8g018690 78.391 870 140 4 1 827 1 865 0.0 1397
MsG0880042633.01.T01 MTR_8g018430 75.930 860 162 3 9 827 6 861 0.0 1368
MsG0880042633.01.T01 MTR_8g018520 76.037 868 167 2 1 827 1 868 0.0 1364
MsG0880042633.01.T01 MTR_8g018690 76.092 870 140 5 1 827 1 845 0.0 1344
MsG0880042633.01.T01 MTR_8g018510 74.023 870 182 5 1 827 1 869 0.0 1334
MsG0880042633.01.T01 MTR_8g018450 70.336 863 172 9 9 827 6 828 0.0 1226
MsG0880042633.01.T01 MTR_2g099570 67.319 869 234 5 1 827 1 861 0.0 1204
MsG0880042633.01.T01 MTR_8g018420 67.211 857 233 4 12 827 7 856 0.0 1182
MsG0880042633.01.T01 MTR_2g099560 63.805 862 270 4 5 827 5 863 0.0 1128
MsG0880042633.01.T01 MTR_8g018730 62.860 867 271 8 7 827 3 864 0.0 1120
MsG0880042633.01.T01 MTR_8g018730 64.397 837 277 7 7 827 3 834 0.0 1113
MsG0880042633.01.T01 MTR_5g024020 62.399 867 278 8 7 827 3 867 0.0 1113
MsG0880042633.01.T01 MTR_8g018735 61.751 868 277 7 8 827 5 865 0.0 1097
MsG0880042633.01.T01 MTR_3g081130 61.298 863 283 6 8 827 4 858 0.0 1090
MsG0880042633.01.T01 MTR_5g024020 61.047 860 265 9 7 827 3 831 0.0 1069
MsG0880042633.01.T01 MTR_8g018650 62.238 858 221 9 14 827 9 807 0.0 1065
MsG0880042633.01.T01 MTR_8g018620 62.398 859 218 11 14 827 9 807 0.0 1059
MsG0880042633.01.T01 MTR_3g081130 62.357 789 250 5 82 827 2 786 0.0 1019
MsG0880042633.01.T01 MTR_8g018590 64.617 797 246 11 62 827 32 823 0.0 1018
MsG0880042633.01.T01 MTR_1g083020 54.220 865 321 9 14 827 18 858 0.0 926
MsG0880042633.01.T01 MTR_1g104650 53.042 871 328 10 15 827 9 856 0.0 926
MsG0880042633.01.T01 MTR_7g113410 53.287 867 328 10 15 827 24 867 0.0 924
MsG0880042633.01.T01 MTR_8g018730 66.267 584 183 5 254 827 5 584 0.0 805
MsG0880042633.01.T01 MTR_8g018735 59.319 617 197 6 8 576 5 615 0.0 741
MsG0880042633.01.T01 MTR_8g021020 86.329 395 54 0 433 827 37 431 0.0 724
MsG0880042633.01.T01 MTR_8g021020 79.487 39 8 0 261 299 1 39 9.53e-12 68.6
MsG0880042633.01.T01 MTR_8g020970 43.727 821 404 12 57 826 113 926 0.0 665
MsG0880042633.01.T01 MTR_3g479460 41.437 835 409 17 53 827 89 903 0.0 601
MsG0880042633.01.T01 MTR_4g066170 40.411 876 453 22 6 827 46 906 0.0 600
MsG0880042633.01.T01 MTR_8g011340 41.080 796 393 14 56 788 46 828 0.0 593
MsG0880042633.01.T01 MTR_3g079450 40.120 830 427 16 53 827 88 902 0.0 586
MsG0880042633.01.T01 MTR_8g080230 40.024 842 424 18 50 827 92 916 0.0 577
MsG0880042633.01.T01 MTR_4g088810 39.975 798 424 13 67 826 114 894 0.0 557
MsG0880042633.01.T01 MTR_3g079420 41.645 766 390 13 113 827 106 865 0.0 545
MsG0880042633.01.T01 MTR_6g452500 40.625 576 317 9 251 810 39 605 4.99e-143 436
MsG0880042633.01.T01 MTR_8g020970 41.681 571 275 12 57 576 113 676 5.87e-131 406
MsG0880042633.01.T01 MTR_3g079450 38.995 577 285 14 53 576 88 650 4.10e-119 375
MsG0880042633.01.T01 MTR_7g012030 61.538 117 44 1 481 596 87 203 1.69e-42 154
MsG0880042633.01.T01 MTR_6g046330 55.469 128 45 2 481 596 77 204 6.47e-37 141
MsG0880042633.01.T01 MTR_8g463810 32.700 263 110 5 351 612 161 357 2.60e-32 130
MsG0880042633.01.T01 MTR_4g088805 39.560 91 55 0 736 826 1 91 2.61e-16 75.5
MsG0880042633.01.T01 MTR_7g113408 42.857 63 35 1 719 781 8 69 1.58e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042633.01.T01 AT1G55020 52.887 866 332 11 13 827 19 859 0.0 914
MsG0880042633.01.T01 AT3G22400 51.941 876 336 11 14 827 34 886 0.0 913
MsG0880042633.01.T01 AT1G72520 42.144 821 417 10 57 827 114 926 0.0 648
MsG0880042633.01.T01 AT1G17420 42.509 821 413 12 57 827 108 919 0.0 640
MsG0880042633.01.T01 AT3G45140 40.843 830 404 19 57 827 95 896 0.0 586
MsG0880042633.01.T01 AT3G45140 42.393 769 366 17 118 827 4 754 0.0 573
MsG0880042633.01.T01 AT1G67560 39.611 823 422 16 64 827 111 917 0.0 557

Find 230 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8:-11738517 MsG0880042633.01.T01:CDS
TGTATCAAATGCAGCCTTAA+TGG 0.190018 8:-11737885 MsG0880042633.01.T01:three_prime_UTR
CTTCTGATGGACTAGAAATA+TGG 0.237016 8:-11738750 MsG0880042633.01.T01:CDS
AATAGTATCTCCATTTAAAA+TGG 0.263959 8:-11738079 MsG0880042633.01.T01:exon
AACCTCTTGAAGGCCTCTTT+TGG 0.275999 8:+11738247 None:intergenic
AAGCTTCCACCATCCTTATA+TGG 0.290240 8:-11738552 MsG0880042633.01.T01:CDS
CAATTGGCTCGTCAAATTCT+TGG 0.291064 8:-11740840 MsG0880042633.01.T01:CDS
TTCCTGAAATAAAACCATTA+AGG 0.307697 8:+11737871 None:intergenic
GCTTAAATGTATAATATCTT+AGG 0.309024 8:+11742724 None:intergenic
ATTCTGAACTCCAAGCATTC+TGG 0.313542 8:-11738657 MsG0880042633.01.T01:CDS
TATATACCTTGAATCACTTT+TGG 0.314352 8:+11740314 None:intergenic
TGGCTATCTAGCTTGCTCTT+TGG 0.332936 8:+11739982 None:intergenic
AATTGGCTCGTCAAATTCTT+GGG 0.333617 8:-11740839 MsG0880042633.01.T01:CDS
CAGGAACCAATTGTCTCATA+TGG 0.350135 8:-11737854 MsG0880042633.01.T01:three_prime_UTR
TCAGTAAGAGTATCATTCTT+TGG 0.350791 8:+11738364 None:intergenic
TGTCTCATATGGTTCAAATA+TGG 0.354626 8:-11737843 MsG0880042633.01.T01:three_prime_UTR
GCTTCAACACCTTCACTTGC+GGG 0.358408 8:+11739535 None:intergenic
GAAGAGTTGAAGACTTTAAG+AGG 0.362440 8:-11740948 MsG0880042633.01.T01:CDS
GACAGTGACATGGGAATTCC+TGG 0.363962 8:-11741398 MsG0880042633.01.T01:CDS
CTTCTTTCCAAACCTCTTGA+AGG 0.364115 8:+11738237 None:intergenic
GAAGGATAAAGCAAAGTATA+TGG 0.367622 8:+11738136 None:intergenic
AGTATGTACAATCTATTGTT+TGG 0.368731 8:+11739739 None:intergenic
CACCCTCAAGGTGATAGTTT+TGG 0.371667 8:-11739580 MsG0880042633.01.T01:CDS
GCCAATTGAGGTTTCGAGTC+AGG 0.371804 8:+11740855 None:intergenic
AAAGAGGCCTTCAAGAGGTT+TGG 0.382690 8:-11738244 MsG0880042633.01.T01:CDS
ACCCGCTCTTTCCATATTTG+AGG 0.383986 8:-11739705 MsG0880042633.01.T01:CDS
ACAGTGACCCCACCCATGTT+TGG 0.384996 8:+11739913 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.385775 8:+11739985 None:intergenic
TTATGATGTCTACAATGATT+TGG 0.388585 8:-11740883 MsG0880042633.01.T01:CDS
GTTCTTCCCCTTCGAGGGTA+AGG 0.388654 8:+11740801 None:intergenic
TCCACTTTGTTTGCAACTCA+TGG 0.389443 8:-11741292 MsG0880042633.01.T01:CDS
GTGCTGAAGCAATCCATATA+AGG 0.392721 8:+11738539 None:intergenic
TTGTCCTCAAATAAGACTTC+TGG 0.394515 8:+11738392 None:intergenic
CATTCGTCATAGCAACAAAT+AGG 0.394550 8:-11739329 MsG0880042633.01.T01:CDS
GACACTGCCACTTCCTTCTT+AGG 0.397476 8:-11742523 MsG0880042633.01.T01:CDS
CTGCTGTTGTTTACAAGGAT+TGG 0.398565 8:-11739155 MsG0880042633.01.T01:CDS
AGTTCCTTGAACAATGGTAT+TGG 0.400202 8:+11740377 None:intergenic
AGCATTAAAGATGACTTCAT+TGG 0.402361 8:-11742704 MsG0880042633.01.T01:exon
GTCAATCCTTCTTCACTAGA+AGG 0.407433 8:+11738118 None:intergenic
CTTTATCCTTCTAGTGAAGA+AGG 0.409562 8:-11738124 MsG0880042633.01.T01:CDS
CACCATAACTAAAGAAAACT+TGG 0.414273 8:-11739938 MsG0880042633.01.T01:CDS
TATGATGTCTACAATGATTT+GGG 0.419822 8:-11740882 MsG0880042633.01.T01:CDS
CTTGTGGGGAAATTATGCTT+TGG 0.426043 8:-11739184 MsG0880042633.01.T01:CDS
TTATAGTAGTTGATGAGATT+AGG 0.428042 8:+11742796 None:intergenic
CTGCCGGTTCTTCCCCTTCG+AGG 0.429096 8:+11740795 None:intergenic
TTTGAACCATATGAGACAAT+TGG 0.430721 8:+11737848 None:intergenic
CAAGAGGTTTGGAAAGAAGT+TGG 0.434558 8:-11738233 MsG0880042633.01.T01:CDS
TATTGAATCAACTTTCTTGT+GGG 0.435079 8:-11739199 MsG0880042633.01.T01:CDS
TTTGCAAGGGAGATGATTGC+TGG 0.437702 8:-11740164 MsG0880042633.01.T01:CDS
TCTTGTCTATAGTACACTAA+TGG 0.438231 8:+11740969 None:intergenic
GGAAGCAAGAGTTTATGAAT+AGG 0.438914 8:+11739288 None:intergenic
CCTTGACAAGACCTCTATAA+TGG 0.440236 8:+11738336 None:intergenic
CAAGTTCCTTCCAGAATGCT+TGG 0.443210 8:+11738647 None:intergenic
ATAGAATTGAAGGTGACAAT+TGG 0.444518 8:-11738285 MsG0880042633.01.T01:CDS
TACCCTCGAAGGGGAAGAAC+CGG 0.444987 8:-11740798 MsG0880042633.01.T01:CDS
GGCAAGTAAACATTGCTAAC+AGG 0.445982 8:+11739556 None:intergenic
AAGGCTGCATTTGATACAAC+AGG 0.447930 8:+11737890 None:intergenic
CCACCACCAAAAGTGATTCA+AGG 0.452144 8:-11740320 MsG0880042633.01.T01:intron
ACAATGGTATTGGACTAATC+TGG 0.453552 8:+11740387 None:intergenic
ATTATCTTGCAAGAAAAGAA+TGG 0.455567 8:+11739642 None:intergenic
GGTGCTATCGGTGATGTTGC+TGG 0.458540 8:-11742556 MsG0880042633.01.T01:CDS
GAAGCAAGAGTTTATGAATA+GGG 0.463724 8:+11739289 None:intergenic
GCCTGACTCGAAACCTCAAT+TGG 0.465501 8:-11740856 MsG0880042633.01.T01:CDS
CGGAGACCGGTAGGAGAGGC+TGG 0.466731 8:+11738799 None:intergenic
TAGTCCAATACCATTGTTCA+AGG 0.470489 8:-11740381 MsG0880042633.01.T01:CDS
GGAACTGGAAAAGGAAAAGT+TGG 0.470758 8:-11741506 MsG0880042633.01.T01:CDS
CAAAGCCCTACTGGTATCAT+TGG 0.470844 8:-11742589 MsG0880042633.01.T01:CDS
AAGTGGATGGATCCATGGTT+TGG 0.473548 8:+11741308 None:intergenic
CGGTCTCCGCCTTCTGATAG+AGG 0.473827 8:-11738785 MsG0880042633.01.T01:CDS
TCTCCATTTAAAATGGATCA+TGG 0.473941 8:-11738072 MsG0880042633.01.T01:exon
ACTTTAAGAGGGGATGGAAC+AGG 0.476377 8:-11740936 MsG0880042633.01.T01:CDS
TTTGTCTCCCAATGTTGGTA+TGG 0.481893 8:+11741451 None:intergenic
TACTCAGGTGATCCTTTCTC+AGG 0.482761 8:+11738436 None:intergenic
AACAGGAGAGCGCAAGGAAT+GGG 0.484527 8:-11740919 MsG0880042633.01.T01:CDS
CTCTATCAGAAGGCGGAGAC+CGG 0.489808 8:+11738786 None:intergenic
ATGATGAGACATTGAGGAAT+CGG 0.490739 8:-11738177 MsG0880042633.01.T01:CDS
TGCTTCAACACCTTCACTTG+CGG 0.491444 8:+11739534 None:intergenic
CATACCAATGGCTGACAAGT+TGG 0.492461 8:+11739458 None:intergenic
TTCCTAATGATCTAATCAAA+AGG 0.492577 8:-11739113 MsG0880042633.01.T01:intron
AAAGTATATGGCATCTTCAC+TGG 0.496464 8:+11738148 None:intergenic
GTGTGGCCTGCTTAGTTCAA+TGG 0.497006 8:+11739600 None:intergenic
AATGGAGCCGGTGTTTCACT+TGG 0.497543 8:+11740987 None:intergenic
ATCAGTTTGGCTCCTTGCCA+AGG 0.497881 8:-11739512 MsG0880042633.01.T01:CDS
CTTACCTCCATACCAACATT+GGG 0.499072 8:-11741458 MsG0880042633.01.T01:CDS
AAGAGTTGAAGACTTTAAGA+GGG 0.499352 8:-11740947 MsG0880042633.01.T01:CDS
GCTGACAAGTTGGTGATAGC+AGG 0.499609 8:+11739468 None:intergenic
ACTGCAGCTCAAAGCCCTAC+TGG 0.500476 8:-11742598 MsG0880042633.01.T01:CDS
GATTATCCTTATGCTTCTGA+TGG 0.500902 8:-11738763 MsG0880042633.01.T01:CDS
AGCTATAGAACGGCCTAAGA+AGG 0.502528 8:+11742510 None:intergenic
TGCCGGTTCTTCCCCTTCGA+GGG 0.503677 8:+11740796 None:intergenic
AATGTCTGCTGTTGTTTACA+AGG 0.504818 8:-11739160 MsG0880042633.01.T01:CDS
TTCTGATGGACTAGAAATAT+GGG 0.506179 8:-11738749 MsG0880042633.01.T01:CDS
AAGGTGTTGAAGCATCAGTT+TGG 0.507198 8:-11739525 MsG0880042633.01.T01:CDS
ATTACCAGAAGTCTTATTTG+AGG 0.507445 8:-11738396 MsG0880042633.01.T01:CDS
AGAATTTGACGAGCCAATTG+AGG 0.508375 8:+11740843 None:intergenic
TTATTGAATCAACTTTCTTG+TGG 0.508477 8:-11739200 MsG0880042633.01.T01:CDS
AACATCACCGATAGCACCTA+TGG 0.510702 8:+11742561 None:intergenic
TCTTGAAAGGTGTTAAACTC+GGG 0.511572 8:+11740461 None:intergenic
ATAATAACATGATCATAAGT+AGG 0.511721 8:+11737995 None:intergenic
TTCTGATACACAACCAAAAG+AGG 0.512590 8:-11738260 MsG0880042633.01.T01:CDS
TTGAAGACTTTAAGAGGGGA+TGG 0.514199 8:-11740942 MsG0880042633.01.T01:CDS
TCTTACCTCCATACCAACAT+TGG 0.515526 8:-11741459 MsG0880042633.01.T01:CDS
TACCTCGGAGATAGAATTGA+AGG 0.515864 8:-11738295 MsG0880042633.01.T01:CDS
GGTATCATTGGTGGTGCCAT+AGG 0.517163 8:-11742577 MsG0880042633.01.T01:CDS
TACTGACTTGACCATTATAG+AGG 0.518055 8:-11738347 MsG0880042633.01.T01:CDS
CACTGGCCATTGAACTAAGC+AGG 0.519121 8:-11739606 MsG0880042633.01.T01:CDS
GACCAAAACTATCACCTTGA+GGG 0.520938 8:+11739578 None:intergenic
TGGAAAAGGAAAAGTTGGAC+AGG 0.521456 8:-11741501 MsG0880042633.01.T01:CDS
GAACAGGAGAGCGCAAGGAA+TGG 0.522042 8:-11740920 MsG0880042633.01.T01:CDS
TCTAGTCCATCAGAAGCATA+AGG 0.525524 8:+11738757 None:intergenic
AGAAGATTCATGCCTGAGAA+AGG 0.525970 8:-11738448 MsG0880042633.01.T01:CDS
TTCTTCCCCTTCGAGGGTAA+GGG 0.526455 8:+11740802 None:intergenic
AGAAAACTTGGAGCCAAACA+TGG 0.527594 8:-11739926 MsG0880042633.01.T01:CDS
ATCACCAACTTGTCAGCCAT+TGG 0.528699 8:-11739462 MsG0880042633.01.T01:intron
TGCACTTGCACGAAATGTCT+TGG 0.528941 8:-11739238 MsG0880042633.01.T01:CDS
GATTGGAATTTCATTGAGCA+AGG 0.534618 8:-11739138 MsG0880042633.01.T01:CDS
AGCCCTACTGGTATCATTGG+TGG 0.535542 8:-11742586 MsG0880042633.01.T01:CDS
ATCTTGAAAGGTGTTAAACT+CGG 0.539742 8:+11740460 None:intergenic
GCTTGTGTCTTGTAACCATA+GGG 0.540521 8:+11742761 None:intergenic
TCCTCAAATATGGAAAGAGC+GGG 0.540806 8:+11739704 None:intergenic
CGATTTCCCTTACCCTCGAA+GGG 0.541927 8:-11740808 MsG0880042633.01.T01:CDS
CGGAAAAGTTCCTTGAACAA+TGG 0.542049 8:+11740371 None:intergenic
CTATTTGTTGCTATGACGAA+TGG 0.543162 8:+11739330 None:intergenic
AAACTATCACCTTGAGGGTG+TGG 0.543185 8:+11739583 None:intergenic
TAATGGAACTTTGAAGCCAC+TGG 0.543868 8:-11739623 MsG0880042633.01.T01:CDS
TATGGGCTGCTATTAAGTCA+TGG 0.543978 8:-11738732 MsG0880042633.01.T01:CDS
GAGGATCCAGCCTCTCCTAC+CGG 0.546593 8:-11738805 MsG0880042633.01.T01:CDS
ATTTACAACAACAAAAGCCT+TGG 0.548619 8:+11739495 None:intergenic
AAGAATGGTTCTAGTAGCAT+AGG 0.548654 8:+11739657 None:intergenic
CCGCATCTTCTTTGCCAACA+AGG 0.548836 8:-11741240 MsG0880042633.01.T01:intron
CTGGAAGGAACTTGTAGAGG+TGG 0.550168 8:-11738638 MsG0880042633.01.T01:CDS
TAAATACGAACCATTCCCTA+TGG 0.550679 8:-11742776 MsG0880042633.01.T01:five_prime_UTR
TGTCTTGTAACCATAGGGAA+TGG 0.551576 8:+11742766 None:intergenic
TCTCTTTGATAAGCACGAAA+AGG 0.553585 8:-11742674 MsG0880042633.01.T01:CDS
AAACAAAGTGGATGGATCCA+TGG 0.554216 8:+11741303 None:intergenic
ATTGGCTCGTCAAATTCTTG+GGG 0.554768 8:-11740838 MsG0880042633.01.T01:CDS
GGATGGAACAGGAGAGCGCA+AGG 0.559613 8:-11740925 MsG0880042633.01.T01:CDS
TACATCAAGAATTATATGCA+AGG 0.560399 8:-11741368 MsG0880042633.01.T01:CDS
ATTGAATCAACTTTCTTGTG+GGG 0.560869 8:-11739198 MsG0880042633.01.T01:CDS
CATCAGTCTGCCATGCAGAA+TGG 0.563367 8:+11740192 None:intergenic
ATGGGCTGCTATTAAGTCAT+GGG 0.563723 8:-11738731 MsG0880042633.01.T01:CDS
CTGCTTAGTTCAATGGCCAG+TGG 0.566870 8:+11739607 None:intergenic
CTATAGTACACTAATGGAGC+CGG 0.569261 8:+11740975 None:intergenic
TGAGTTGCAAACAAAGTGGA+TGG 0.569767 8:+11741295 None:intergenic
GCGATTTCCCTTACCCTCGA+AGG 0.569933 8:-11740809 MsG0880042633.01.T01:CDS
GTCTCCCAATGTTGGTATGG+AGG 0.572486 8:+11741454 None:intergenic
AGAGTTGAAGACTTTAAGAG+GGG 0.573240 8:-11740946 MsG0880042633.01.T01:CDS
TGCTTGTGTCTTGTAACCAT+AGG 0.574107 8:+11742760 None:intergenic
GAGACATTGAGGAATCGGTA+TGG 0.574624 8:-11738172 MsG0880042633.01.T01:CDS
ATTTAGAGGAGTAGCTGTTG+AGG 0.574648 8:-11738824 MsG0880042633.01.T01:intron
GAGAGAGCGCACATCTTGAA+AGG 0.575061 8:+11740448 None:intergenic
AGAACGGCCTAAGAAGGAAG+TGG 0.575241 8:+11742516 None:intergenic
TTGCAAGGGAGATGATTGCT+GGG 0.576355 8:-11740163 MsG0880042633.01.T01:CDS
GTTTACTTGCCCGCAAGTGA+AGG 0.576493 8:-11739544 MsG0880042633.01.T01:CDS
TGATCATAAGTAGGAAGTGA+GGG 0.577278 8:+11738004 None:intergenic
AAGATGACTTCATTGGTGAA+AGG 0.578712 8:-11742697 MsG0880042633.01.T01:CDS
AATAAATGCAAGTGAGACAA+AGG 0.579607 8:-11739680 MsG0880042633.01.T01:CDS
TCCATGAGTTGCAAACAAAG+TGG 0.581030 8:+11741291 None:intergenic
AAGGCGGAGACCGGTAGGAG+AGG 0.581152 8:+11738795 None:intergenic
TGATAAGCACGAAAAGGTGA+AGG 0.581687 8:-11742668 MsG0880042633.01.T01:CDS
TTCCTCAAATATGGAAAGAG+CGG 0.581997 8:+11739703 None:intergenic
GAGCCGGTGTTTCACTTGGA+AGG 0.583942 8:+11740991 None:intergenic
GGAACAATGATGAGACATTG+AGG 0.591650 8:-11738183 MsG0880042633.01.T01:CDS
ATCAGAAGGCGGAGACCGGT+AGG 0.591937 8:+11738790 None:intergenic
GTAACTACAGATCTCAATTG+AGG 0.593972 8:+11740500 None:intergenic
TGAGTATGATGAGCTCGCTA+AGG 0.594254 8:-11738419 MsG0880042633.01.T01:CDS
GCACCACCAATGATACCAGT+AGG 0.595832 8:+11742583 None:intergenic
CTTCAAGTGTCAAACTCACA+AGG 0.596098 8:+11741336 None:intergenic
GAACTTGTAGAGGTGGGTCA+TGG 0.597001 8:-11738631 MsG0880042633.01.T01:CDS
GGACAGGAAACATTTCTGAA+AGG 0.599176 8:-11741485 MsG0880042633.01.T01:CDS
CAACAACAAAAGCCTTGGCA+AGG 0.602926 8:+11739500 None:intergenic
AAGGATAATCCTCTATCAGA+AGG 0.603529 8:+11738776 None:intergenic
GAAGAAGGATTGACTTGCCG+AGG 0.604299 8:-11738109 MsG0880042633.01.T01:CDS
TTTGAATGGGACAGTGACAT+GGG 0.604319 8:-11741407 MsG0880042633.01.T01:CDS
TTCATTGTGTCACGATAATG+TGG 0.604329 8:+11739267 None:intergenic
CTAAGCAGGCCACACCCTCA+AGG 0.605346 8:-11739592 MsG0880042633.01.T01:CDS
TGGAAGGAACTTGTAGAGGT+GGG 0.607381 8:-11738637 MsG0880042633.01.T01:CDS
TTAAGGATATATCCTCCATA+CGG 0.608057 8:+11738487 None:intergenic
CTTGAAGATATTCCAAACCA+TGG 0.608577 8:-11741320 MsG0880042633.01.T01:CDS
GGTGGTGCCATAGGTGCTAT+CGG 0.609872 8:-11742568 MsG0880042633.01.T01:CDS
GTGCTTGTTCACCATCAGAT+CGG 0.610157 8:+11740351 None:intergenic
TTAGCGAGCTCATCATACTC+AGG 0.610394 8:+11738421 None:intergenic
GACTGATGAGGAATTTGCAA+GGG 0.610600 8:-11740177 MsG0880042633.01.T01:CDS
CTTGAAAGGTGTTAAACTCG+GGG 0.611801 8:+11740462 None:intergenic
CGAATGGCTCAACAACAGCA+TGG 0.613252 8:+11739346 None:intergenic
TTGAACAGAAACTCACTCAA+AGG 0.613745 8:-11738204 MsG0880042633.01.T01:CDS
TTTGGACAATATCCGTATGG+AGG 0.613753 8:-11738499 MsG0880042633.01.T01:CDS
AGATACTATTAGGAATGCCT+CGG 0.614836 8:+11738092 None:intergenic
GCTTTGAATAACAGATGAGA+AGG 0.615987 8:-11738036 MsG0880042633.01.T01:three_prime_UTR
AACAAATAGGCATCTTAGTG+TGG 0.616014 8:-11739316 MsG0880042633.01.T01:CDS
TTGGCTCGTCAAATTCTTGG+GGG 0.616447 8:-11740837 MsG0880042633.01.T01:CDS
CACCTTCAATTCTATCTCCG+AGG 0.616920 8:+11738293 None:intergenic
AAATGTCTTGGTCAATGCAG+AGG 0.620032 8:-11739226 MsG0880042633.01.T01:CDS
AATATGGAAAGAGCGGGTCG+TGG 0.621020 8:+11739710 None:intergenic
AGCAATCCATATAAGGATGG+TGG 0.623898 8:+11738546 None:intergenic
ATTAGTGCTACAAGTGCTGA+TGG 0.624947 8:-11742478 MsG0880042633.01.T01:intron
AGACTGATGAGGAATTTGCA+AGG 0.627020 8:-11740178 MsG0880042633.01.T01:CDS
GATAAGCACGAAAAGGTGAA+GGG 0.628987 8:-11742667 MsG0880042633.01.T01:CDS
AATGTCTTGGTCAATGCAGA+GGG 0.629733 8:-11739225 MsG0880042633.01.T01:CDS
GAATGGCTCAACAACAGCAT+GGG 0.631116 8:+11739347 None:intergenic
TTCTGCATGGCAGACTGATG+AGG 0.631772 8:-11740189 MsG0880042633.01.T01:CDS
GTGCGCTCTCTCTACGAGGG+TGG 0.634384 8:-11740437 MsG0880042633.01.T01:CDS
CCTTGTTGGCAAAGAAGATG+CGG 0.636835 8:+11741240 None:intergenic
TCAACTTGAGAGCTATAGAA+CGG 0.637447 8:+11742500 None:intergenic
AACCAAAAGAGGCCTTCAAG+AGG 0.638282 8:-11738249 MsG0880042633.01.T01:CDS
ATCTGGCTTAGTACATCAGT+AGG 0.640323 8:+11740404 None:intergenic
ATTCTGGAAGGAACTTGTAG+AGG 0.640924 8:-11738641 MsG0880042633.01.T01:CDS
CACCACCAATGATACCAGTA+GGG 0.641870 8:+11742584 None:intergenic
ATGATCATAAGTAGGAAGTG+AGG 0.642382 8:+11738003 None:intergenic
TGAAGCAATCCATATAAGGA+TGG 0.642489 8:+11738543 None:intergenic
CCATTATAGAGGTCTTGTCA+AGG 0.646315 8:-11738336 MsG0880042633.01.T01:CDS
GTTTAAGATGCAAACTCGTG+CGG 0.646505 8:-11738584 MsG0880042633.01.T01:CDS
AGATGTGCGCTCTCTCTACG+AGG 0.646720 8:-11740441 MsG0880042633.01.T01:CDS
ATACCTTCCAAGTGAAACAC+CGG 0.647734 8:-11740994 MsG0880042633.01.T01:CDS
GAAAACTTGGAGCCAAACAT+GGG 0.647756 8:-11739925 MsG0880042633.01.T01:intron
GGACCAAAACTATCACCTTG+AGG 0.648019 8:+11739577 None:intergenic
TGAACTCCAAGCATTCTGGA+AGG 0.649554 8:-11738653 MsG0880042633.01.T01:CDS
AACAGGACTAGAATGTTACA+AGG 0.650048 8:+11737907 None:intergenic
GCTTCTGATGAGCAATACCT+CGG 0.654024 8:-11738310 MsG0880042633.01.T01:CDS
GTTGGCAAAGAAGATGCGGT+CGG 0.663469 8:+11741244 None:intergenic
GCTGCTATTAAGTCATGGGT+TGG 0.665305 8:-11738727 MsG0880042633.01.T01:CDS
GAACAGTGGACCATTCTGCA+TGG 0.669132 8:-11740202 MsG0880042633.01.T01:intron
GATAATCCTCTATCAGAAGG+CGG 0.677768 8:+11738779 None:intergenic
CGAAAAGGTGAAGGGAACTG+TGG 0.680100 8:-11742659 MsG0880042633.01.T01:CDS
GATGTGCGCTCTCTCTACGA+GGG 0.685367 8:-11740440 MsG0880042633.01.T01:CDS
GATTTCCCTTACCCTCGAAG+GGG 0.685881 8:-11740807 MsG0880042633.01.T01:CDS
ACTTAAAGAATGCCACATGG+TGG 0.703250 8:-11738606 MsG0880042633.01.T01:CDS
TTGCATCTTAAACCACCATG+TGG 0.713418 8:+11738594 None:intergenic
TGCAAGGGAGATGATTGCTG+GGG 0.719674 8:-11740162 MsG0880042633.01.T01:CDS
GTGACTTAAAGAATGCCACA+TGG 0.775897 8:-11738609 MsG0880042633.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTTCAATATTTTAG+TGG + Chr8:11738978-11738997 None:intergenic 10.0%
!!! AATTTTAAATTGAAAAAGAT+TGG + Chr8:11738704-11738723 None:intergenic 10.0%
!!! ATTTTTTTTAATTAACCTAA+TGG - Chr8:11738245-11738264 MsG0880042633.01.T01:CDS 10.0%
!!! TTTTGTATGAAATATATTAT+TGG + Chr8:11740405-11740424 None:intergenic 10.0%
!! ATATATCTACTGTATATTAA+AGG - Chr8:11738431-11738450 MsG0880042633.01.T01:CDS 15.0%
!! TGCATAATATAATATATGTA+GGG + Chr8:11738329-11738348 None:intergenic 15.0%
!! TTCAAATATAAAGAAATAGA+GGG + Chr8:11738644-11738663 None:intergenic 15.0%
!! TTGCATAATATAATATATGT+AGG + Chr8:11738330-11738349 None:intergenic 15.0%
!! TTTATAATTAGTGACATTAT+TGG - Chr8:11740639-11740658 MsG0880042633.01.T01:intron 15.0%
!!! ACATACAAAAAATATGTTTT+AGG + Chr8:11741804-11741823 None:intergenic 15.0%
!!! ATATTGGTTATAAAATAATC+AGG - Chr8:11738940-11738959 MsG0880042633.01.T01:intron 15.0%
!!! CATACAAAAAATATGTTTTA+GGG + Chr8:11741803-11741822 None:intergenic 15.0%
!!! CTCTTAATAGATTTTAAAAT+TGG - Chr8:11738669-11738688 MsG0880042633.01.T01:CDS 15.0%
!!! TTTCAGTATTAATTTTGAAT+GGG - Chr8:11739251-11739270 MsG0880042633.01.T01:CDS 15.0%
!! AAGAAATAATAGAGTGAAAA+AGG + Chr8:11738384-11738403 None:intergenic 20.0%
!! AATAGTATCTCCATTTAAAA+TGG - Chr8:11742592-11742611 MsG0880042633.01.T01:CDS 20.0%
!! AATCATATATAGAAAGCTAA+TGG - Chr8:11740423-11740442 MsG0880042633.01.T01:CDS 20.0%
!! ATAAAAAATGAGAAAGAGAA+AGG + Chr8:11738227-11738246 None:intergenic 20.0%
!! ATAATAACATGATCATAAGT+AGG + Chr8:11742679-11742698 None:intergenic 20.0%
!! CCTATAAAAATGTCAAAAAT+TGG + Chr8:11739147-11739166 None:intergenic 20.0%
!! GCATAATATAATATATGTAG+GGG + Chr8:11738328-11738347 None:intergenic 20.0%
!! GCTTAAATGTATAATATCTT+AGG + Chr8:11737950-11737969 None:intergenic 20.0%
!! GTATGAAATATATTATTGGT+AGG + Chr8:11740401-11740420 None:intergenic 20.0%
!! GTTCAAATATAAAGAAATAG+AGG + Chr8:11738645-11738664 None:intergenic 20.0%
!! TGAAAACAAAAGAGAAAATA+AGG + Chr8:11738885-11738904 None:intergenic 20.0%
!! TTCATGAGTTAATCATAAAT+AGG + Chr8:11741278-11741297 None:intergenic 20.0%
!!! AATTTTTATTCTTACCTTGT+TGG + Chr8:11739448-11739467 None:intergenic 20.0%
!!! ATTTTGTCATTTGGTATAAA+TGG - Chr8:11738540-11738559 MsG0880042633.01.T01:CDS 20.0%
!!! CCAATTTTTGACATTTTTAT+AGG - Chr8:11739144-11739163 MsG0880042633.01.T01:CDS 20.0%
!!! CTTTCAGTATTAATTTTGAA+TGG - Chr8:11739250-11739269 MsG0880042633.01.T01:CDS 20.0%
!!! TCATTCAAAATATCAAGTTT+TGG + Chr8:11739641-11739660 None:intergenic 20.0%
!!! TTTTAAATGGAGATACTATT+AGG + Chr8:11742592-11742611 None:intergenic 20.0%
!!! TTTTTAATTAACCTAATGGT+TGG - Chr8:11738249-11738268 MsG0880042633.01.T01:CDS 20.0%
! AAATTTCTTACTATGAACAG+TGG - Chr8:11740455-11740474 MsG0880042633.01.T01:CDS 25.0%
! AAGAAAAACTAAAACAGGTT+AGG - Chr8:11739899-11739918 MsG0880042633.01.T01:intron 25.0%
! AATATAAAGAAATAGAGGGA+TGG + Chr8:11738640-11738659 None:intergenic 25.0%
! AATATATTATTGGTAGGACT+AGG + Chr8:11740395-11740414 None:intergenic 25.0%
! AGTATGTACAATCTATTGTT+TGG + Chr8:11740935-11740954 None:intergenic 25.0%
! ATTAAAGGTAGTATAGCTAA+TGG - Chr8:11738446-11738465 MsG0880042633.01.T01:CDS 25.0%
! ATTAATGAGATTCATACCAA+TGG + Chr8:11741228-11741247 None:intergenic 25.0%
! ATTATCTTGCAAGAAAAGAA+TGG + Chr8:11741032-11741051 None:intergenic 25.0%
! GTGACTTTAATGTAGAATAT+TGG - Chr8:11738924-11738943 MsG0880042633.01.T01:intron 25.0%
! TACATCAAGAATTATATGCA+AGG - Chr8:11739303-11739322 MsG0880042633.01.T01:CDS 25.0%
! TATGATGTCTACAATGATTT+GGG - Chr8:11739789-11739808 MsG0880042633.01.T01:intron 25.0%
! TATTGAATCAACTTTCTTGT+GGG - Chr8:11741472-11741491 MsG0880042633.01.T01:CDS 25.0%
! TCCAATAAGTGTGATATATT+TGG - Chr8:11738492-11738511 MsG0880042633.01.T01:CDS 25.0%
! TCTAGTCTAGTTATATGAAA+GGG + Chr8:11739001-11739020 None:intergenic 25.0%
! TTATGATGTCTACAATGATT+TGG - Chr8:11739788-11739807 MsG0880042633.01.T01:intron 25.0%
! TTATTGAATCAACTTTCTTG+TGG - Chr8:11741471-11741490 MsG0880042633.01.T01:CDS 25.0%
! TTCCTAATGATCTAATCAAA+AGG - Chr8:11741558-11741577 MsG0880042633.01.T01:intron 25.0%
! TTCCTGAAATAAAACCATTA+AGG + Chr8:11742803-11742822 None:intergenic 25.0%
!! ATTCTTTTCTTGCAAGATAA+TGG - Chr8:11741031-11741050 MsG0880042633.01.T01:intron 25.0%
!! ATTTTTATAGGAACTGGAAA+AGG - Chr8:11739156-11739175 MsG0880042633.01.T01:CDS 25.0%
!! GGACTTTATATTTTGTCATT+TGG - Chr8:11738531-11738550 MsG0880042633.01.T01:CDS 25.0%
!! TATATACCTTGAATCACTTT+TGG + Chr8:11740360-11740379 None:intergenic 25.0%
!! TGGCAAATTTTAAATAGCTA+TGG + Chr8:11738620-11738639 None:intergenic 25.0%
!! TTTGACATTTTTATAGGAAC+TGG - Chr8:11739150-11739169 MsG0880042633.01.T01:CDS 25.0%
!!! AATCTTTAGAATCATAAGCT+AGG + Chr8:11739987-11740006 None:intergenic 25.0%
!!! ATGAATCTTCTACTTTTTGT+TGG + Chr8:11742214-11742233 None:intergenic 25.0%
!!! CATAATTTTTTACGTTCATG+TGG - Chr8:11741642-11741661 MsG0880042633.01.T01:intron 25.0%
!!! GCATTTATTTTCCTCAAATA+TGG + Chr8:11740980-11740999 None:intergenic 25.0%
!!! GCTTATGATTCTAAAGATTT+TGG - Chr8:11739988-11740007 MsG0880042633.01.T01:CDS 25.0%
!!! TACCTTTTGATTAGATCATT+AGG + Chr8:11741563-11741582 None:intergenic 25.0%
!!! TGTTTTTTTTCTTTCCAAAG+TGG - Chr8:11740811-11740830 MsG0880042633.01.T01:CDS 25.0%
!!! TTATAGTAGTTGATGAGATT+AGG + Chr8:11737878-11737897 None:intergenic 25.0%
AAGCTAGATAGCCAAAAATT+TGG - Chr8:11740698-11740717 MsG0880042633.01.T01:intron 30.0%
AATAAATGCAAGTGAGACAA+AGG - Chr8:11740991-11741010 MsG0880042633.01.T01:CDS 30.0%
ACAACAAAACCTTACATCTT+TGG - Chr8:11741583-11741602 MsG0880042633.01.T01:intron 30.0%
ACACATCATCAAAAAACTCT+CGG - Chr8:11740539-11740558 MsG0880042633.01.T01:intron 30.0%
AGCATTAAAGATGACTTCAT+TGG - Chr8:11737967-11737986 MsG0880042633.01.T01:three_prime_UTR 30.0%
AGGTAAATCTTAATGAGTTG+CGG + Chr8:11738865-11738884 None:intergenic 30.0%
ATAGAATTGAAGGTGACAAT+TGG - Chr8:11742386-11742405 MsG0880042633.01.T01:intron 30.0%
ATTGAATCAACTTTCTTGTG+GGG - Chr8:11741473-11741492 MsG0880042633.01.T01:CDS 30.0%
ATTTACAACAACAAAAGCCT+TGG + Chr8:11741179-11741198 None:intergenic 30.0%
CAACCAAAAAACACATGTTT+AGG + Chr8:11739951-11739970 None:intergenic 30.0%
CACCATAACTAAAGAAAACT+TGG - Chr8:11740733-11740752 MsG0880042633.01.T01:intron 30.0%
GAAGCAAGAGTTTATGAATA+GGG + Chr8:11741385-11741404 None:intergenic 30.0%
GAAGGATAAAGCAAAGTATA+TGG + Chr8:11742538-11742557 None:intergenic 30.0%
GCCAAATATATCACACTTAT+TGG + Chr8:11738496-11738515 None:intergenic 30.0%
GCTATATAGCTATGATAAAG+TGG + Chr8:11739601-11739620 None:intergenic 30.0%
GGTATCAAAAACTCTTAATG+TGG + Chr8:11738844-11738863 None:intergenic 30.0%
GTCTAGTCTAGTTATATGAA+AGG + Chr8:11739002-11739021 None:intergenic 30.0%
TCATATAACTAGACTAGACT+AGG - Chr8:11739003-11739022 MsG0880042633.01.T01:intron 30.0%
TCTTGTCTATAGTACACTAA+TGG + Chr8:11739705-11739724 None:intergenic 30.0%
TGACCAAGTAAAACGATAAA+TGG - Chr8:11739032-11739051 MsG0880042633.01.T01:intron 30.0%
TGTCTCATATGGTTCAAATA+TGG - Chr8:11742828-11742847 MsG0880042633.01.T01:five_prime_UTR 30.0%
TTAAGGATATATCCTCCATA+CGG + Chr8:11742187-11742206 None:intergenic 30.0%
TTTGAACCATATGAGACAAT+TGG + Chr8:11742826-11742845 None:intergenic 30.0%
! AAGAGTTGAAGACTTTAAGA+GGG - Chr8:11739724-11739743 MsG0880042633.01.T01:CDS 30.0%
! AATTTTGGACAATATCCGTA+TGG - Chr8:11742169-11742188 MsG0880042633.01.T01:intron 30.0%
! ATTTTAAACGTGGAGAAGTA+GGG - Chr8:11738281-11738300 MsG0880042633.01.T01:CDS 30.0%
! CAACCATGATCCATTTTAAA+TGG + Chr8:11742605-11742624 None:intergenic 30.0%
! CTCCAAGTTTTCTTTAGTTA+TGG + Chr8:11740738-11740757 None:intergenic 30.0%
! GATCCATTTATCGTTTTACT+TGG + Chr8:11739038-11739057 None:intergenic 30.0%
! TCTCCATTTAAAATGGATCA+TGG - Chr8:11742599-11742618 MsG0880042633.01.T01:CDS 30.0%
!! ATCTTGAAAGGTGTTAAACT+CGG + Chr8:11740214-11740233 None:intergenic 30.0%
!! ATTACCAGAAGTCTTATTTG+AGG - Chr8:11742275-11742294 MsG0880042633.01.T01:intron 30.0%
!! ATTCCTTGCTTGTTATTTAG+AGG - Chr8:11741833-11741852 MsG0880042633.01.T01:intron 30.0%
!! GTTTTTAGAAATGTGTGTAG+AGG - Chr8:11739519-11739538 MsG0880042633.01.T01:CDS 30.0%
!! TACTTTTTGTTGGTCGATTA+AGG + Chr8:11742204-11742223 None:intergenic 30.0%
!! TCAGTAAGAGTATCATTCTT+TGG + Chr8:11742310-11742329 None:intergenic 30.0%
!! TTCTGATGGACTAGAAATAT+GGG - Chr8:11741922-11741941 MsG0880042633.01.T01:intron 30.0%
!!! AGCCTTAATGGTTTTATTTC+AGG - Chr8:11742798-11742817 MsG0880042633.01.T01:five_prime_UTR 30.0%
!!! TGGTGTTATCACCAAATTTT+TGG + Chr8:11740712-11740731 None:intergenic 30.0%
!!! TGTTTTAGTTTTTCTTCTGC+CGG + Chr8:11739895-11739914 None:intergenic 30.0%
!!! TTGGTTGCTACTTTTAATTC+AGG - Chr8:11740658-11740677 MsG0880042633.01.T01:intron 30.0%
AAAGTATATGGCATCTTCAC+TGG + Chr8:11742526-11742545 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - Chr8:11741355-11741374 MsG0880042633.01.T01:CDS 35.0%
AACAGGACTAGAATGTTACA+AGG + Chr8:11742767-11742786 None:intergenic 35.0%
AAGATGACTTCATTGGTGAA+AGG - Chr8:11737974-11737993 MsG0880042633.01.T01:three_prime_UTR 35.0%
AAGGATAATCCTCTATCAGA+AGG + Chr8:11741898-11741917 None:intergenic 35.0%
AAGTGTGATATATTTGGCGT+TGG - Chr8:11738498-11738517 MsG0880042633.01.T01:CDS 35.0%
ACATCAGAGTTGAAGAGATT+AGG + Chr8:11739562-11739581 None:intergenic 35.0%
ACTCCTCTAAATAACAAGCA+AGG + Chr8:11741839-11741858 None:intergenic 35.0%
AGATACTATTAGGAATGCCT+CGG + Chr8:11742582-11742601 None:intergenic 35.0%
AGTTCCTTGAACAATGGTAT+TGG + Chr8:11740297-11740316 None:intergenic 35.0%
ATGATCATAAGTAGGAAGTG+AGG + Chr8:11742671-11742690 None:intergenic 35.0%
ATGATGAGACATTGAGGAAT+CGG - Chr8:11742494-11742513 MsG0880042633.01.T01:CDS 35.0%
ATTGACTGACCAAAGATGTA+AGG + Chr8:11741595-11741614 None:intergenic 35.0%
CAAAATATGGCACAAGTGTT+TGG + Chr8:11739927-11739946 None:intergenic 35.0%
CACATGTTTAGGCCAAAATA+TGG + Chr8:11739940-11739959 None:intergenic 35.0%
CATTCGTCATAGCAACAAAT+AGG - Chr8:11741342-11741361 MsG0880042633.01.T01:CDS 35.0%
CTTGAAGATATTCCAAACCA+TGG - Chr8:11739351-11739370 MsG0880042633.01.T01:CDS 35.0%
CTTTATCCTTCTAGTGAAGA+AGG - Chr8:11742547-11742566 MsG0880042633.01.T01:CDS 35.0%
GAAGAGTTGAAGACTTTAAG+AGG - Chr8:11739723-11739742 MsG0880042633.01.T01:CDS 35.0%
GATTATCCTTATGCTTCTGA+TGG - Chr8:11741908-11741927 MsG0880042633.01.T01:intron 35.0%
GATTGGAATTTCATTGAGCA+AGG - Chr8:11741533-11741552 MsG0880042633.01.T01:intron 35.0%
GGAAGCAAGAGTTTATGAAT+AGG + Chr8:11741386-11741405 None:intergenic 35.0%
GGCAGAAGAAAAACTAAAAC+AGG - Chr8:11739894-11739913 MsG0880042633.01.T01:intron 35.0%
GGTAAAAGAGTCTAAGTAGT+CGG + Chr8:11738757-11738776 None:intergenic 35.0%
GGTAAAGAGATCATAGAAGT+AGG + Chr8:11738736-11738755 None:intergenic 35.0%
GTAACTACAGATCTCAATTG+AGG + Chr8:11740174-11740193 None:intergenic 35.0%
TAAATACGAACCATTCCCTA+TGG - Chr8:11737895-11737914 MsG0880042633.01.T01:three_prime_UTR 35.0%
TAGTCCAATACCATTGTTCA+AGG - Chr8:11740290-11740309 MsG0880042633.01.T01:intron 35.0%
TCAACTTGAGAGCTATAGAA+CGG + Chr8:11738174-11738193 None:intergenic 35.0%
TCATAAGCTAGGTAAACATC+TGG + Chr8:11739976-11739995 None:intergenic 35.0%
TCTCTGTGAACTAACTCAAT+TGG + Chr8:11738361-11738380 None:intergenic 35.0%
TCTCTTTGATAAGCACGAAA+AGG - Chr8:11737997-11738016 MsG0880042633.01.T01:three_prime_UTR 35.0%
TGAAGCAATCCATATAAGGA+TGG + Chr8:11742131-11742150 None:intergenic 35.0%
TGATCATAAGTAGGAAGTGA+GGG + Chr8:11742670-11742689 None:intergenic 35.0%
TGGTATAAATGGAACTACGT+GGG - Chr8:11738551-11738570 MsG0880042633.01.T01:CDS 35.0%
TGTATCAAATGCAGCCTTAA+TGG - Chr8:11742786-11742805 MsG0880042633.01.T01:five_prime_UTR 35.0%
TTCATTGTGTCACGATAATG+TGG + Chr8:11741407-11741426 None:intergenic 35.0%
TTCCTCAAATATGGAAAGAG+CGG + Chr8:11740971-11740990 None:intergenic 35.0%
TTCTGATACACAACCAAAAG+AGG - Chr8:11742411-11742430 MsG0880042633.01.T01:intron 35.0%
TTCTTGATGTAAAAAGCTCC+AGG + Chr8:11739294-11739313 None:intergenic 35.0%
TTGAACAGAAACTCACTCAA+AGG - Chr8:11742467-11742486 MsG0880042633.01.T01:intron 35.0%
TTGGTATAAATGGAACTACG+TGG - Chr8:11738550-11738569 MsG0880042633.01.T01:CDS 35.0%
TTGTCCTCAAATAAGACTTC+TGG + Chr8:11742282-11742301 None:intergenic 35.0%
! AAAATTCACGAATGCCACTT+TGG + Chr8:11740828-11740847 None:intergenic 35.0%
! AATGTCTGCTGTTGTTTACA+AGG - Chr8:11741511-11741530 MsG0880042633.01.T01:intron 35.0%
! ACAATGGTATTGGACTAATC+TGG + Chr8:11740287-11740306 None:intergenic 35.0%
! AGAGTTGAAGACTTTAAGAG+GGG - Chr8:11739725-11739744 MsG0880042633.01.T01:CDS 35.0%
! ATAAGATCGACTTTAACCAC+TGG - Chr8:11740884-11740903 MsG0880042633.01.T01:CDS 35.0%
! CAAACACTTGTGCCATATTT+TGG - Chr8:11739925-11739944 MsG0880042633.01.T01:intron 35.0%
! CATTTTAAACGTGGAGAAGT+AGG - Chr8:11738280-11738299 MsG0880042633.01.T01:CDS 35.0%
! CTATTTGTTGCTATGACGAA+TGG + Chr8:11741344-11741363 None:intergenic 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - Chr8:11742154-11742173 MsG0880042633.01.T01:intron 35.0%
! GCTTTGAATAACAGATGAGA+AGG - Chr8:11742635-11742654 MsG0880042633.01.T01:CDS 35.0%
! GTTTTCTTTAGTTATGGTGC+TGG + Chr8:11740732-11740751 None:intergenic 35.0%
! TAAGATCGACTTTAACCACT+GGG - Chr8:11740885-11740904 MsG0880042633.01.T01:CDS 35.0%
! TGGCATTCGTGAATTTTGTT+CGG - Chr8:11740831-11740850 MsG0880042633.01.T01:CDS 35.0%
! TTTTTACGTTCATGTGGTGT+CGG - Chr8:11741648-11741667 MsG0880042633.01.T01:intron 35.0%
!! AAGAATGGTTCTAGTAGCAT+AGG + Chr8:11741017-11741036 None:intergenic 35.0%
!! AATTGGCTCGTCAAATTCTT+GGG - Chr8:11739832-11739851 MsG0880042633.01.T01:intron 35.0%
!! ATACCTTGAATCACTTTTGG+TGG + Chr8:11740357-11740376 None:intergenic 35.0%
!! CTTCTGATGGACTAGAAATA+TGG - Chr8:11741921-11741940 MsG0880042633.01.T01:intron 35.0%
!! TACTGACTTGACCATTATAG+AGG - Chr8:11742324-11742343 MsG0880042633.01.T01:intron 35.0%
!! TCTTGAAAGGTGTTAAACTC+GGG + Chr8:11740213-11740232 None:intergenic 35.0%
!! TTTTGTTTGTCTCCCAATGT+TGG + Chr8:11739228-11739247 None:intergenic 35.0%
!!! GAGAGTTTTTTGATGATGTG+TGG + Chr8:11740540-11740559 None:intergenic 35.0%
!!! TGGCCTAAACATGTGTTTTT+TGG - Chr8:11739945-11739964 MsG0880042633.01.T01:CDS 35.0%
AAACAAAGTGGATGGATCCA+TGG + Chr8:11739371-11739390 None:intergenic 40.0%
AAATGTCTTGGTCAATGCAG+AGG - Chr8:11741445-11741464 MsG0880042633.01.T01:CDS 40.0%
AAGCTTCCACCATCCTTATA+TGG - Chr8:11742119-11742138 MsG0880042633.01.T01:intron 40.0%
AAGGCTGCATTTGATACAAC+AGG + Chr8:11742784-11742803 None:intergenic 40.0%
AAGTCGATCTTATAACCTCG+AGG + Chr8:11740877-11740896 None:intergenic 40.0%
AATGTCTTGGTCAATGCAGA+GGG - Chr8:11741446-11741465 MsG0880042633.01.T01:CDS 40.0%
ACTTAAAGAATGCCACATGG+TGG - Chr8:11742065-11742084 MsG0880042633.01.T01:intron 40.0%
AGAAAACTTGGAGCCAAACA+TGG - Chr8:11740745-11740764 MsG0880042633.01.T01:intron 40.0%
AGAAGATTCATGCCTGAGAA+AGG - Chr8:11742223-11742242 MsG0880042633.01.T01:intron 40.0%
AGAATTTGACGAGCCAATTG+AGG + Chr8:11739831-11739850 None:intergenic 40.0%
AGACTGATGAGGAATTTGCA+AGG - Chr8:11740493-11740512 MsG0880042633.01.T01:CDS 40.0%
AGCAATCCATATAAGGATGG+TGG + Chr8:11742128-11742147 None:intergenic 40.0%
AGTCGATCTTATAACCTCGA+GGG + Chr8:11740876-11740895 None:intergenic 40.0%
ATACCTTCCAAGTGAAACAC+CGG - Chr8:11739677-11739696 MsG0880042633.01.T01:CDS 40.0%
ATACTTATGCCACACAGTGT+TGG + Chr8:11738778-11738797 None:intergenic 40.0%
ATGACAAAAGTCAAACCCAG+TGG + Chr8:11740903-11740922 None:intergenic 40.0%
ATTCTGAACTCCAAGCATTC+TGG - Chr8:11742014-11742033 MsG0880042633.01.T01:intron 40.0%
ATTTAGAGGAGTAGCTGTTG+AGG - Chr8:11741847-11741866 MsG0880042633.01.T01:intron 40.0%
CAAGAGGTTTGGAAAGAAGT+TGG - Chr8:11742438-11742457 MsG0880042633.01.T01:intron 40.0%
CAGGAACCAATTGTCTCATA+TGG - Chr8:11742817-11742836 MsG0880042633.01.T01:five_prime_UTR 40.0%
CCAAATGATTCATCTCTGGA+AGG + Chr8:11740090-11740109 None:intergenic 40.0%
CCTTCCAGAGATGAATCATT+TGG - Chr8:11740087-11740106 MsG0880042633.01.T01:intron 40.0%
CCTTGACAAGACCTCTATAA+TGG + Chr8:11742338-11742357 None:intergenic 40.0%
CGGAAAAGTTCCTTGAACAA+TGG + Chr8:11740303-11740322 None:intergenic 40.0%
CTATAGTACACTAATGGAGC+CGG + Chr8:11739699-11739718 None:intergenic 40.0%
CTTACCTCCATACCAACATT+GGG - Chr8:11739213-11739232 MsG0880042633.01.T01:CDS 40.0%
CTTCAAGTGTCAAACTCACA+AGG + Chr8:11739338-11739357 None:intergenic 40.0%
CTTCTTTCCAAACCTCTTGA+AGG + Chr8:11742437-11742456 None:intergenic 40.0%
CTTGTGGGGAAATTATGCTT+TGG - Chr8:11741487-11741506 MsG0880042633.01.T01:CDS 40.0%
GAAAACTTGGAGCCAAACAT+GGG - Chr8:11740746-11740765 MsG0880042633.01.T01:intron 40.0%
GACCAAAACTATCACCTTGA+GGG + Chr8:11741096-11741115 None:intergenic 40.0%
GACTGATGAGGAATTTGCAA+GGG - Chr8:11740494-11740513 MsG0880042633.01.T01:CDS 40.0%
GATAAGCACGAAAAGGTGAA+GGG - Chr8:11738004-11738023 MsG0880042633.01.T01:three_prime_UTR 40.0%
GATAATCCTCTATCAGAAGG+CGG + Chr8:11741895-11741914 None:intergenic 40.0%
GCTTGTGTCTTGTAACCATA+GGG + Chr8:11737913-11737932 None:intergenic 40.0%
GGAACAATGATGAGACATTG+AGG - Chr8:11742488-11742507 MsG0880042633.01.T01:CDS 40.0%
GGAACTGGAAAAGGAAAAGT+TGG - Chr8:11739165-11739184 MsG0880042633.01.T01:CDS 40.0%
GGACAGGAAACATTTCTGAA+AGG - Chr8:11739186-11739205 MsG0880042633.01.T01:CDS 40.0%
GGCAAGTAAACATTGCTAAC+AGG + Chr8:11741118-11741137 None:intergenic 40.0%
GGTATAAATGGAACTACGTG+GGG - Chr8:11738552-11738571 MsG0880042633.01.T01:CDS 40.0%
GTATAAATGGAACTACGTGG+GGG - Chr8:11738553-11738572 MsG0880042633.01.T01:CDS 40.0%
GTCAATCCTTCTTCACTAGA+AGG + Chr8:11742556-11742575 None:intergenic 40.0%
GTGACTTAAAGAATGCCACA+TGG - Chr8:11742062-11742081 MsG0880042633.01.T01:intron 40.0%
GTGCTGAAGCAATCCATATA+AGG + Chr8:11742135-11742154 None:intergenic 40.0%
GTGTCCAAATGATTCATCTC+TGG + Chr8:11740094-11740113 None:intergenic 40.0%
TACCTCGGAGATAGAATTGA+AGG - Chr8:11742376-11742395 MsG0880042633.01.T01:intron 40.0%
TCCATGAGTTGCAAACAAAG+TGG + Chr8:11739383-11739402 None:intergenic 40.0%
TCCTCAAATATGGAAAGAGC+GGG + Chr8:11740970-11740989 None:intergenic 40.0%
TCTTACCTCCATACCAACAT+TGG - Chr8:11739212-11739231 MsG0880042633.01.T01:CDS 40.0%
TGAATATCGACATGTGTGAC+AGG - Chr8:11741294-11741313 MsG0880042633.01.T01:CDS 40.0%
TGAGTTGCAAACAAAGTGGA+TGG + Chr8:11739379-11739398 None:intergenic 40.0%
TGATAAGCACGAAAAGGTGA+AGG - Chr8:11738003-11738022 MsG0880042633.01.T01:three_prime_UTR 40.0%
TGCTTGTGTCTTGTAACCAT+AGG + Chr8:11737914-11737933 None:intergenic 40.0%
TGGAAAAGGAAAAGTTGGAC+AGG - Chr8:11739170-11739189 MsG0880042633.01.T01:CDS 40.0%
TGTCTTGTAACCATAGGGAA+TGG + Chr8:11737908-11737927 None:intergenic 40.0%
TTGCATCTTAAACCACCATG+TGG + Chr8:11742080-11742099 None:intergenic 40.0%
TTTGAATGGGACAGTGACAT+GGG - Chr8:11739264-11739283 MsG0880042633.01.T01:CDS 40.0%
TTTGGACAATATCCGTATGG+AGG - Chr8:11742172-11742191 MsG0880042633.01.T01:intron 40.0%
TTTGTCTCCCAATGTTGGTA+TGG + Chr8:11739223-11739242 None:intergenic 40.0%
! AAGGAACTTTTCCGATCTGA+TGG - Chr8:11740309-11740328 MsG0880042633.01.T01:intron 40.0%
! AATTTGAAATCTGTCCCTCG+AGG - Chr8:11740859-11740878 MsG0880042633.01.T01:CDS 40.0%
! ACTCTTTTACCAACACTGTG+TGG - Chr8:11738766-11738785 MsG0880042633.01.T01:CDS 40.0%
! ATCTCTGGAAGGTAAACAGT+GGG + Chr8:11740079-11740098 None:intergenic 40.0%
! ATCTGGCTTAGTACATCAGT+AGG + Chr8:11740270-11740289 None:intergenic 40.0%
! ATGGGCTGCTATTAAGTCAT+GGG - Chr8:11741940-11741959 MsG0880042633.01.T01:intron 40.0%
! ATTCTGGAAGGAACTTGTAG+AGG - Chr8:11742030-11742049 MsG0880042633.01.T01:intron 40.0%
! CCATTATAGAGGTCTTGTCA+AGG - Chr8:11742335-11742354 MsG0880042633.01.T01:intron 40.0%
! CTGCTGTTGTTTACAAGGAT+TGG - Chr8:11741516-11741535 MsG0880042633.01.T01:intron 40.0%
! GAGCTCACACATTTTAAACG+TGG - Chr8:11738271-11738290 MsG0880042633.01.T01:CDS 40.0%
! GGCATTCGTGAATTTTGTTC+GGG - Chr8:11740832-11740851 MsG0880042633.01.T01:CDS 40.0%
! GTTTAAGATGCAAACTCGTG+CGG - Chr8:11742087-11742106 MsG0880042633.01.T01:intron 40.0%
! TATGGGCTGCTATTAAGTCA+TGG - Chr8:11741939-11741958 MsG0880042633.01.T01:intron 40.0%
! TCCACTTTGTTTGCAACTCA+TGG - Chr8:11739379-11739398 MsG0880042633.01.T01:intron 40.0%
! TCTAGTCCATCAGAAGCATA+AGG + Chr8:11741917-11741936 None:intergenic 40.0%
! TTGAAGACTTTAAGAGGGGA+TGG - Chr8:11739729-11739748 MsG0880042633.01.T01:CDS 40.0%
! TTTTGAATGGGACAGTGACA+TGG - Chr8:11739263-11739282 MsG0880042633.01.T01:CDS 40.0%
!! AAGGTGTTGAAGCATCAGTT+TGG - Chr8:11741146-11741165 MsG0880042633.01.T01:intron 40.0%
!! ATTAGTGCTACAAGTGCTGA+TGG - Chr8:11738193-11738212 MsG0880042633.01.T01:CDS 40.0%
!! ATTGGCTCGTCAAATTCTTG+GGG - Chr8:11739833-11739852 MsG0880042633.01.T01:intron 40.0%
!! CAATTGGCTCGTCAAATTCT+TGG - Chr8:11739831-11739850 MsG0880042633.01.T01:intron 40.0%
!! CTTGAAAGGTGTTAAACTCG+GGG + Chr8:11740212-11740231 None:intergenic 40.0%
!! GGGTTTGACTTTTGTCATAC+AGG - Chr8:11740905-11740924 MsG0880042633.01.T01:CDS 40.0%
!! TAATGGAACTTTGAAGCCAC+TGG - Chr8:11741048-11741067 MsG0880042633.01.T01:intron 40.0%
!!! TTTGGCGTTGGTAACTGTTT+TGG - Chr8:11738510-11738529 MsG0880042633.01.T01:CDS 40.0%
AAACTATCACCTTGAGGGTG+TGG + Chr8:11741091-11741110 None:intergenic 45.0%
AAAGAGGCCTTCAAGAGGTT+TGG - Chr8:11742427-11742446 MsG0880042633.01.T01:intron 45.0%
AACATCACCGATAGCACCTA+TGG + Chr8:11738113-11738132 None:intergenic 45.0%
AACCAAAAGAGGCCTTCAAG+AGG - Chr8:11742422-11742441 MsG0880042633.01.T01:intron 45.0%
AAGTGGATGGATCCATGGTT+TGG + Chr8:11739366-11739385 None:intergenic 45.0%
ACCCGCTCTTTCCATATTTG+AGG - Chr8:11740966-11740985 MsG0880042633.01.T01:CDS 45.0%
AGCTATAGAACGGCCTAAGA+AGG + Chr8:11738164-11738183 None:intergenic 45.0%
ATCACCAACTTGTCAGCCAT+TGG - Chr8:11741209-11741228 MsG0880042633.01.T01:intron 45.0%
ATGTGTGAGCTCCAACCATT+AGG + Chr8:11738263-11738282 None:intergenic 45.0%
CAAAGCCCTACTGGTATCAT+TGG - Chr8:11738082-11738101 MsG0880042633.01.T01:exon 45.0%
CAACAACAAAAGCCTTGGCA+AGG + Chr8:11741174-11741193 None:intergenic 45.0%
CAAGTTCCTTCCAGAATGCT+TGG + Chr8:11742027-11742046 None:intergenic 45.0%
CACCACCAATGATACCAGTA+GGG + Chr8:11738090-11738109 None:intergenic 45.0%
CACCTTCAATTCTATCTCCG+AGG + Chr8:11742381-11742400 None:intergenic 45.0%
CATACCAATGGCTGACAAGT+TGG + Chr8:11741216-11741235 None:intergenic 45.0%
CCACCACCAAAAGTGATTCA+AGG - Chr8:11740351-11740370 MsG0880042633.01.T01:CDS 45.0%
CCTTGTTGGCAAAGAAGATG+CGG + Chr8:11739434-11739453 None:intergenic 45.0%
CGAGTTCGATTCTCACATCT+AGG + Chr8:11738818-11738837 None:intergenic 45.0%
GAATGGCTCAACAACAGCAT+GGG + Chr8:11741327-11741346 None:intergenic 45.0%
GAGACATTGAGGAATCGGTA+TGG - Chr8:11742499-11742518 MsG0880042633.01.T01:CDS 45.0%
GCTGCTATTAAGTCATGGGT+TGG - Chr8:11741944-11741963 MsG0880042633.01.T01:intron 45.0%
GCTTCTGATGAGCAATACCT+CGG - Chr8:11742361-11742380 MsG0880042633.01.T01:intron 45.0%
GGACCAAAACTATCACCTTG+AGG + Chr8:11741097-11741116 None:intergenic 45.0%
GTGCTTGTTCACCATCAGAT+CGG + Chr8:11740323-11740342 None:intergenic 45.0%
TACTCAGGTGATCCTTTCTC+AGG + Chr8:11742238-11742257 None:intergenic 45.0%
TGAACTCCAAGCATTCTGGA+AGG - Chr8:11742018-11742037 MsG0880042633.01.T01:intron 45.0%
TGAGTATGATGAGCTCGCTA+AGG - Chr8:11742252-11742271 MsG0880042633.01.T01:intron 45.0%
TGCACTTGCACGAAATGTCT+TGG - Chr8:11741433-11741452 MsG0880042633.01.T01:CDS 45.0%
TGCTTCAACACCTTCACTTG+CGG + Chr8:11741140-11741159 None:intergenic 45.0%
TGGAAGGAACTTGTAGAGGT+GGG - Chr8:11742034-11742053 MsG0880042633.01.T01:intron 45.0%
TTAGCGAGCTCATCATACTC+AGG + Chr8:11742253-11742272 None:intergenic 45.0%
TTGCAAGGGAGATGATTGCT+GGG - Chr8:11740508-11740527 MsG0880042633.01.T01:CDS 45.0%
TTTGCAAGGGAGATGATTGC+TGG - Chr8:11740507-11740526 MsG0880042633.01.T01:CDS 45.0%
! AACCTCTTGAAGGCCTCTTT+TGG + Chr8:11742427-11742446 None:intergenic 45.0%
! ACTTTAAGAGGGGATGGAAC+AGG - Chr8:11739735-11739754 MsG0880042633.01.T01:CDS 45.0%
! CACCCTCAAGGTGATAGTTT+TGG - Chr8:11741091-11741110 MsG0880042633.01.T01:intron 45.0%
! CATCTCTGGAAGGTAAACAG+TGG + Chr8:11740080-11740099 None:intergenic 45.0%
! TTGGCTCGTCAAATTCTTGG+GGG - Chr8:11739834-11739853 MsG0880042633.01.T01:intron 45.0%
!! CCTTGAATCACTTTTGGTGG+TGG + Chr8:11740354-11740373 None:intergenic 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + Chr8:11740689-11740708 None:intergenic 45.0%
!! TGGCTATCTAGCTTGCTCTT+TGG + Chr8:11740692-11740711 None:intergenic 45.0%
AACTTGGAGCCAAACATGGG+TGG - Chr8:11740749-11740768 MsG0880042633.01.T01:intron 50.0%
AATATGGAAAGAGCGGGTCG+TGG + Chr8:11740964-11740983 None:intergenic 50.0%
AATGGAGCCGGTGTTTCACT+TGG + Chr8:11739687-11739706 None:intergenic 50.0%
ACTTGGAGCCAAACATGGGT+GGG - Chr8:11740750-11740769 MsG0880042633.01.T01:intron 50.0%
AGAACGGCCTAAGAAGGAAG+TGG + Chr8:11738158-11738177 None:intergenic 50.0%
AGCCCTACTGGTATCATTGG+TGG - Chr8:11738085-11738104 MsG0880042633.01.T01:CDS 50.0%
AGGGGTTGAGTATCAAACCC+TGG + Chr8:11738310-11738329 None:intergenic 50.0%
CACTGGCCATTGAACTAAGC+AGG - Chr8:11741065-11741084 MsG0880042633.01.T01:intron 50.0%
CATCAGTCTGCCATGCAGAA+TGG + Chr8:11740482-11740501 None:intergenic 50.0%
CCGCATCTTCTTTGCCAACA+AGG - Chr8:11739431-11739450 MsG0880042633.01.T01:intron 50.0%
CGAAAAGGTGAAGGGAACTG+TGG - Chr8:11738012-11738031 MsG0880042633.01.T01:three_prime_UTR 50.0%
CGAATGGCTCAACAACAGCA+TGG + Chr8:11741328-11741347 None:intergenic 50.0%
CGATTTCCCTTACCCTCGAA+GGG - Chr8:11739863-11739882 MsG0880042633.01.T01:intron 50.0%
CTGCTTAGTTCAATGGCCAG+TGG + Chr8:11741067-11741086 None:intergenic 50.0%
CTGGAAGGAACTTGTAGAGG+TGG - Chr8:11742033-11742052 MsG0880042633.01.T01:intron 50.0%
GAACAGTGGACCATTCTGCA+TGG - Chr8:11740469-11740488 MsG0880042633.01.T01:CDS 50.0%
GAACTTGTAGAGGTGGGTCA+TGG - Chr8:11742040-11742059 MsG0880042633.01.T01:intron 50.0%
GACAGTGACATGGGAATTCC+TGG - Chr8:11739273-11739292 MsG0880042633.01.T01:CDS 50.0%
GATTTCCCTTACCCTCGAAG+GGG - Chr8:11739864-11739883 MsG0880042633.01.T01:intron 50.0%
GCACCACCAATGATACCAGT+AGG + Chr8:11738091-11738110 None:intergenic 50.0%
GCTTCAACACCTTCACTTGC+GGG + Chr8:11741139-11741158 None:intergenic 50.0%
GGACTTCGAGTCTCACTGTT+AGG + Chr8:11740058-11740077 None:intergenic 50.0%
GTCTCCCAATGTTGGTATGG+AGG + Chr8:11739220-11739239 None:intergenic 50.0%
GTGTGGCCTGCTTAGTTCAA+TGG + Chr8:11741074-11741093 None:intergenic 50.0%
GTTGGCAAAGAAGATGCGGT+CGG + Chr8:11739430-11739449 None:intergenic 50.0%
GTTTACTTGCCCGCAAGTGA+AGG - Chr8:11741127-11741146 MsG0880042633.01.T01:intron 50.0%
TGCAAGGGAGATGATTGCTG+GGG - Chr8:11740509-11740528 MsG0880042633.01.T01:CDS 50.0%
TTCTGCATGGCAGACTGATG+AGG - Chr8:11740482-11740501 MsG0880042633.01.T01:CDS 50.0%
TTCTTCCCCTTCGAGGGTAA+GGG + Chr8:11739872-11739891 None:intergenic 50.0%
! AACAGGAGAGCGCAAGGAAT+GGG - Chr8:11739752-11739771 MsG0880042633.01.T01:intron 50.0%
! ATCAGTTTGGCTCCTTGCCA+AGG - Chr8:11741159-11741178 MsG0880042633.01.T01:intron 50.0%
! GACACTGCCACTTCCTTCTT+AGG - Chr8:11738148-11738167 MsG0880042633.01.T01:CDS 50.0%
! GAGAGAGCGCACATCTTGAA+AGG + Chr8:11740226-11740245 None:intergenic 50.0%
! GCCAATTGAGGTTTCGAGTC+AGG + Chr8:11739819-11739838 None:intergenic 50.0%
! GCCTGACTCGAAACCTCAAT+TGG - Chr8:11739815-11739834 MsG0880042633.01.T01:intron 50.0%
!! GAAGAAGGATTGACTTGCCG+AGG - Chr8:11742562-11742581 MsG0880042633.01.T01:CDS 50.0%
!! GCTGACAAGTTGGTGATAGC+AGG + Chr8:11741206-11741225 None:intergenic 50.0%
!! GGTATCATTGGTGGTGCCAT+AGG - Chr8:11738094-11738113 MsG0880042633.01.T01:CDS 50.0%
ACAGTGACCCCACCCATGTT+TGG + Chr8:11740761-11740780 None:intergenic 55.0%
ACTGCAGCTCAAAGCCCTAC+TGG - Chr8:11738073-11738092 MsG0880042633.01.T01:exon 55.0%
AGATGTGCGCTCTCTCTACG+AGG - Chr8:11740230-11740249 MsG0880042633.01.T01:intron 55.0%
CTCTATCAGAAGGCGGAGAC+CGG + Chr8:11741888-11741907 None:intergenic 55.0%
CTTGGAGCCAAACATGGGTG+GGG - Chr8:11740751-11740770 MsG0880042633.01.T01:intron 55.0%
GAGCCGGTGTTTCACTTGGA+AGG + Chr8:11739683-11739702 None:intergenic 55.0%
GATGTGCGCTCTCTCTACGA+GGG - Chr8:11740231-11740250 MsG0880042633.01.T01:intron 55.0%
GCGATTTCCCTTACCCTCGA+AGG - Chr8:11739862-11739881 MsG0880042633.01.T01:intron 55.0%
GTGGAGAAGTAGGGTCTCCA+GGG - Chr8:11738290-11738309 MsG0880042633.01.T01:CDS 55.0%
GTTCTTCCCCTTCGAGGGTA+AGG + Chr8:11739873-11739892 None:intergenic 55.0%
TACCCTCGAAGGGGAAGAAC+CGG - Chr8:11739873-11739892 MsG0880042633.01.T01:intron 55.0%
! GAACAGGAGAGCGCAAGGAA+TGG - Chr8:11739751-11739770 MsG0880042633.01.T01:intron 55.0%
! GGTGCTATCGGTGATGTTGC+TGG - Chr8:11738115-11738134 MsG0880042633.01.T01:CDS 55.0%
!! GGTGGTGCCATAGGTGCTAT+CGG - Chr8:11738103-11738122 MsG0880042633.01.T01:CDS 55.0%
ATCAGAAGGCGGAGACCGGT+AGG + Chr8:11741884-11741903 None:intergenic 60.0%
CGGTCTCCGCCTTCTGATAG+AGG - Chr8:11741886-11741905 MsG0880042633.01.T01:intron 60.0%
CGTGGAGAAGTAGGGTCTCC+AGG - Chr8:11738289-11738308 MsG0880042633.01.T01:CDS 60.0%
CTAAGCAGGCCACACCCTCA+AGG - Chr8:11741079-11741098 MsG0880042633.01.T01:intron 60.0%
GAGGATCCAGCCTCTCCTAC+CGG - Chr8:11741866-11741885 MsG0880042633.01.T01:intron 60.0%
GGGTGGGGTCACTGTAGAAC+AGG - Chr8:11740766-11740785 MsG0880042633.01.T01:intron 60.0%
! GGATGGAACAGGAGAGCGCA+AGG - Chr8:11739746-11739765 MsG0880042633.01.T01:CDS 60.0%
!! TGCCGGTTCTTCCCCTTCGA+GGG + Chr8:11739878-11739897 None:intergenic 60.0%
AAGGCGGAGACCGGTAGGAG+AGG + Chr8:11741879-11741898 None:intergenic 65.0%
GTGCGCTCTCTCTACGAGGG+TGG - Chr8:11740234-11740253 MsG0880042633.01.T01:intron 65.0%
!! CTGCCGGTTCTTCCCCTTCG+AGG + Chr8:11739879-11739898 None:intergenic 65.0%
CGGAGACCGGTAGGAGAGGC+TGG + Chr8:11741875-11741894 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 11737824 11742869 11737824 ID=MsG0880042633.01;Name=MsG0880042633.01
Chr8 mRNA 11737824 11742869 11737824 ID=MsG0880042633.01.T01;Parent=MsG0880042633.01;Name=MsG0880042633.01.T01;_AED=0.49;_eAED=0.49;_QI=153|0.75|0.77|1|0.87|0.88|9|260|827
Chr8 exon 11737824 11738840 11737824 ID=MsG0880042633.01.T01:exon:3543;Parent=MsG0880042633.01.T01
Chr8 exon 11739114 11739377 11739114 ID=MsG0880042633.01.T01:exon:3542;Parent=MsG0880042633.01.T01
Chr8 exon 11739463 11739766 11739463 ID=MsG0880042633.01.T01:exon:3541;Parent=MsG0880042633.01.T01
Chr8 exon 11739926 11740013 11739926 ID=MsG0880042633.01.T01:exon:3540;Parent=MsG0880042633.01.T01
Chr8 exon 11740133 11740218 11740133 ID=MsG0880042633.01.T01:exon:3539;Parent=MsG0880042633.01.T01
Chr8 exon 11740321 11740539 11740321 ID=MsG0880042633.01.T01:exon:3538;Parent=MsG0880042633.01.T01
Chr8 exon 11740778 11741018 11740778 ID=MsG0880042633.01.T01:exon:3537;Parent=MsG0880042633.01.T01
Chr8 exon 11741241 11741527 11741241 ID=MsG0880042633.01.T01:exon:3536;Parent=MsG0880042633.01.T01
Chr8 exon 11742479 11742869 11742479 ID=MsG0880042633.01.T01:exon:3535;Parent=MsG0880042633.01.T01
Chr8 five_prime_UTR 11742717 11742869 11742717 ID=MsG0880042633.01.T01:five_prime_utr;Parent=MsG0880042633.01.T01
Chr8 CDS 11742479 11742716 11742479 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11741241 11741527 11741241 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11740778 11741018 11740778 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11740321 11740539 11740321 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11740133 11740218 11740133 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11739926 11740013 11739926 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11739463 11739766 11739463 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11739114 11739377 11739114 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 CDS 11738084 11738840 11738084 ID=MsG0880042633.01.T01:cds;Parent=MsG0880042633.01.T01
Chr8 three_prime_UTR 11737824 11738083 11737824 ID=MsG0880042633.01.T01:three_prime_utr;Parent=MsG0880042633.01.T01
Gene Sequence

>MsG0880042633.01.T01

ATGACTTCATTGGTGAAAGGTCTCTTTGATAAGCACGAAAAGGTGAAGGGAACTGTGGTGTTGATGCAAAAGAATGTGTTAGACATCAACGCACTCACTGCAGCTCAAAGCCCTACTGGTATCATTGGTGGTGCCATAGGTGCTATCGGTGATGTTGCTGGCAATATACTTGACACTGCCACTTCCTTCTTAGGCCGTTCTATAGCTCTCAAGTTGATTAGTGCTACAAGTGCTGATGGAACTGGAAAAGGAAAAGTTGGACAGGAAACATTTCTGAAAGGTATTCTTACCTCCATACCAACATTGGGAGACAAACAAAATGCTTTCAGTATTAATTTTGAATGGGACAGTGACATGGGAATTCCTGGAGCTTTTTACATCAAGAATTATATGCAAGGTGAATTCTTCCTTGTGAGTTTGACACTTGAAGATATTCCAAACCATGGATCCATCCACTTTGTTTGCAACTCATGGATTTACAATTCTAAAAAGTACAAAACCGACCGCATCTTCTTTGCCAACAAGACATACCTTCCAAGTGAAACACCGGCTCCATTAGTGTACTATAGACAAGAAGAGTTGAAGACTTTAAGAGGGGATGGAACAGGAGAGCGCAAGGAATGGGAAAGAATATATGATTATGATGTCTACAATGATTTGGGTGAGCCTGACTCGAAACCTCAATTGGCTCGTCAAATTCTTGGGGGATCGAGCGATTTCCCTTACCCTCGAAGGGGAAGAACCGGCAGAAGAAAAACTAAAACAGCATCTCAGAATGTCATACCTCAATTGAGATCTGTAGTTACGTTACAACTCAATAACCCCGAGTTTAACACCTTTCAAGATGTGCGCTCTCTCTACGAGGGTGGAATTAAGCTTCCTACTGATGTACTAAGCCAGATTAGTCCAATACCATTGTTCAAGGAACTTTTCCGATCTGATGGTGAACAAGCACTTAAGTTTCCACCACCAAAAGTGATTCAAGTGGACCATTCTGCATGGCAGACTGATGAGGAATTTGCAAGGGAGATGATTGCTGGGGTGAATCCACACATCATCAAAAAACTCTCGGAGTTTCCACCAAAGAGCAAGCTAGATAGCCAAAAATTTGGTGATAACACCAGCACCATAACTAAAGAAAACTTGGAGCCAAACATGGGCTATCCAAACAATAGATTGTACATACTTGATCACCACGACCCGCTCTTTCCATATTTGAGGAAAATAAATGCAAGTGAGACAAAGGCCTATGCTACTAGAACCATTCTTTTCTTGCAAGATAATGGAACTTTGAAGCCACTGGCCATTGAACTAAGCAGGCCACACCCTCAAGGTGATAGTTTTGGTCCTGTTAGCAATGTTTACTTGCCCGCAAGTGAAGGTGTTGAAGCATCAGTTTGGCTCCTTGCCAAGGCTTTTGTTGTTGTAAATGACTCCTGCTATCACCAACTTGTCAGCCATTGGTTGAATACCCATGCTGTTGTTGAGCCATTCGTCATAGCAACAAATAGGCATCTTAGTGTGGTTCACCCTATTCATAAACTCTTGCTTCCACATTATCGTGACACAATGAACATAAATGCACTTGCACGAAATGTCTTGGTCAATGCAGAGGGTATTATTGAATCAACTTTCTTGTGGGGAAATTATGCTTTGGAAATGTCTGCTGTTGTTTACAAGGATTGGAATTTCATTGAGCAAGGACTTCCTAATGATCTAATCAAAAGAGGAGTAGCTGTTGAGGATCCAGCCTCTCCTACCGGTCTCCGCCTTCTGATAGAGGATTATCCTTATGCTTCTGATGGACTAGAAATATGGGCTGCTATTAAGTCATGGGTTGGTGAATATGTGAACTTCTATTACAAGTCAGATGAAGCTATTGCACAAGATTCTGAACTCCAAGCATTCTGGAAGGAACTTGTAGAGGTGGGTCATGGTGACTTAAAGAATGCCACATGGTGGTTTAAGATGCAAACTCGTGCGGAGTTGATCGAAGCTTCCACCATCCTTATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTATGGAGGATATATCCTTAATCGACCAACAAAAAGTAGAAGATTCATGCCTGAGAAAGGATCACCTGAGTATGATGAGCTCGCTAAGGATTACCAGAAGTCTTATTTGAGGACAATCACACCAAAGAATGATACTCTTACTGACTTGACCATTATAGAGGTCTTGTCAAGGCATGCTTCTGATGAGCAATACCTCGGAGATAGAATTGAAGGTGACAATTGGACTTCTGATACACAACCAAAAGAGGCCTTCAAGAGGTTTGGAAAGAAGTTGGCTGAAATTGAACAGAAACTCACTCAAAGGAACAATGATGAGACATTGAGGAATCGGTATGGACCAGTGAAGATGCCATATACTTTGCTTTATCCTTCTAGTGAAGAAGGATTGACTTGCCGAGGCATTCCTAATAGTATCTCCATTTAA

Protein sequence

>MsG0880042633.01.T01

MTSLVKGLFDKHEKVKGTVVLMQKNVLDINALTAAQSPTGIIGGAIGAIGDVAGNILDTATSFLGRSIALKLISATSADGTGKGKVGQETFLKGILTSIPTLGDKQNAFSINFEWDSDMGIPGAFYIKNYMQGEFFLVSLTLEDIPNHGSIHFVCNSWIYNSKKYKTDRIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGERKEWERIYDYDVYNDLGEPDSKPQLARQILGGSSDFPYPRRGRTGRRKTKTASQNVIPQLRSVVTLQLNNPEFNTFQDVRSLYEGGIKLPTDVLSQISPIPLFKELFRSDGEQALKFPPPKVIQVDHSAWQTDEEFAREMIAGVNPHIIKKLSEFPPKSKLDSQKFGDNTSTITKENLEPNMGYPNNRLYILDHHDPLFPYLRKINASETKAYATRTILFLQDNGTLKPLAIELSRPHPQGDSFGPVSNVYLPASEGVEASVWLLAKAFVVVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGNYALEMSAVVYKDWNFIEQGLPNDLIKRGVAVEDPASPTGLRLLIEDYPYASDGLEIWAAIKSWVGEYVNFYYKSDEAIAQDSELQAFWKELVEVGHGDLKNATWWFKMQTRAELIEASTILIWIASALHAAVNFGQYPYGGYILNRPTKSRRFMPEKGSPEYDELAKDYQKSYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGDRIEGDNWTSDTQPKEAFKRFGKKLAEIEQKLTQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI*