Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045139.01.T01 | XP_024627494.1 | 91.468 | 293 | 22 | 1 | 1 | 290 | 1 | 293 | 0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045139.01.T01 | Q9C616 | 48.955 | 335 | 116 | 13 | 1 | 289 | 1 | 326 | 1.07E-73 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045139.01.T01 | G7LGX4 | 91.438 | 292 | 22 | 1 | 1 | 289 | 1 | 292 | 0.0 | 514 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0880045139.01.T01 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000360.01 | MsG0880045139.01 | 0.804514 | 2.082685e-49 | 1.075890e-46 |
| MsG0180001565.01 | MsG0880045139.01 | 0.811318 | 7.433487e-51 | 4.586588e-48 |
| MsG0880045139.01 | MsG0880047226.01 | 0.800443 | 1.438091e-48 | 6.696940e-46 |
| MsG0180006260.01 | MsG0880045139.01 | 0.803075 | 4.144528e-49 | 2.063255e-46 |
| MsG0880041860.01 | MsG0880045139.01 | 0.808509 | 2.991585e-50 | 1.713667e-47 |
| MsG0880043516.01 | MsG0880045139.01 | 0.826323 | 2.889383e-54 | 2.700850e-51 |
| MsG0280010868.01 | MsG0880045139.01 | 0.818626 | 1.776988e-52 | 1.336996e-49 |
| MsG0280011154.01 | MsG0880045139.01 | 0.802930 | 4.440003e-49 | 2.202357e-46 |
| MsG0280011258.01 | MsG0880045139.01 | 0.807215 | 5.635144e-50 | 3.120576e-47 |
| MsG0280011282.01 | MsG0880045139.01 | 0.812163 | 4.868870e-51 | 3.072876e-48 |
| MsG0480022331.01 | MsG0880045139.01 | 0.807940 | 3.954070e-50 | 2.231302e-47 |
| MsG0580024489.01 | MsG0880045139.01 | 0.805564 | 1.255996e-49 | 6.666278e-47 |
| MsG0380016140.01 | MsG0880045139.01 | 0.804020 | 2.638829e-49 | 1.346109e-46 |
| MsG0380016994.01 | MsG0880045139.01 | 0.820289 | 7.420141e-53 | 5.846903e-50 |
| MsG0580029640.01 | MsG0880045139.01 | 0.841147 | 5.669121e-58 | 8.254354e-55 |
| MsG0280008280.01 | MsG0880045139.01 | 0.829995 | 3.767539e-55 | 3.919022e-52 |
| MsG0280009514.01 | MsG0880045139.01 | 0.839142 | 1.891123e-57 | 2.587810e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045139.01.T01 | MTR_8g066310 | 91.438 | 292 | 22 | 1 | 1 | 289 | 1 | 292 | 0.0 | 514 |
| MsG0880045139.01.T01 | MTR_5g029470 | 55.301 | 349 | 88 | 13 | 1 | 290 | 1 | 340 | 7.27e-99 | 296 |
| MsG0880045139.01.T01 | MTR_3g064840 | 59.574 | 141 | 44 | 3 | 154 | 289 | 258 | 390 | 1.90e-45 | 159 |
| MsG0880045139.01.T01 | MTR_6g071625 | 80.952 | 84 | 14 | 2 | 154 | 235 | 184 | 267 | 6.78e-39 | 140 |
| MsG0880045139.01.T01 | MTR_1g021520 | 84.722 | 72 | 11 | 0 | 165 | 236 | 121 | 192 | 2.45e-36 | 132 |
| MsG0880045139.01.T01 | MTR_7g069660 | 44.737 | 114 | 59 | 1 | 131 | 244 | 36 | 145 | 2.80e-24 | 100 |
| MsG0880045139.01.T01 | MTR_0223s0040 | 67.241 | 58 | 19 | 0 | 169 | 226 | 17 | 74 | 2.96e-22 | 94.0 |
| MsG0880045139.01.T01 | MTR_1g112370 | 65.517 | 58 | 20 | 0 | 169 | 226 | 21 | 78 | 7.14e-22 | 94.0 |
| MsG0880045139.01.T01 | MTR_2g023580 | 67.188 | 64 | 20 | 1 | 163 | 226 | 49 | 111 | 3.98e-21 | 90.1 |
| MsG0880045139.01.T01 | MTR_2g084230 | 63.934 | 61 | 22 | 0 | 169 | 229 | 96 | 156 | 5.75e-20 | 88.2 |
| MsG0880045139.01.T01 | MTR_8g086410 | 62.295 | 61 | 23 | 0 | 169 | 229 | 110 | 170 | 7.05e-20 | 89.4 |
| MsG0880045139.01.T01 | MTR_8g086410 | 62.295 | 61 | 23 | 0 | 169 | 229 | 108 | 168 | 7.17e-20 | 89.4 |
| MsG0880045139.01.T01 | MTR_2g084230 | 63.934 | 61 | 22 | 0 | 169 | 229 | 96 | 156 | 9.84e-20 | 88.6 |
| MsG0880045139.01.T01 | MTR_7g098250 | 52.439 | 82 | 37 | 1 | 158 | 239 | 250 | 329 | 1.54e-19 | 88.6 |
| MsG0880045139.01.T01 | MTR_2g016220 | 62.295 | 61 | 23 | 0 | 169 | 229 | 88 | 148 | 4.57e-19 | 86.7 |
| MsG0880045139.01.T01 | MTR_2g016220 | 62.295 | 61 | 23 | 0 | 169 | 229 | 88 | 148 | 5.01e-19 | 86.3 |
| MsG0880045139.01.T01 | MTR_7g115530 | 39.062 | 128 | 67 | 2 | 171 | 287 | 219 | 346 | 9.42e-19 | 86.3 |
| MsG0880045139.01.T01 | MTR_1g080330 | 47.872 | 94 | 35 | 2 | 155 | 236 | 148 | 239 | 1.25e-18 | 84.3 |
| MsG0880045139.01.T01 | MTR_1g080330 | 47.872 | 94 | 35 | 2 | 155 | 236 | 148 | 239 | 1.28e-18 | 85.5 |
| MsG0880045139.01.T01 | MTR_7g093030 | 54.412 | 68 | 29 | 1 | 172 | 239 | 214 | 279 | 1.64e-18 | 84.0 |
| MsG0880045139.01.T01 | MTR_7g115530 | 54.286 | 70 | 32 | 0 | 171 | 240 | 219 | 288 | 2.80e-18 | 83.6 |
| MsG0880045139.01.T01 | MTR_7g093030 | 54.412 | 68 | 29 | 1 | 172 | 239 | 214 | 279 | 2.95e-18 | 84.3 |
| MsG0880045139.01.T01 | MTR_7g115530 | 54.286 | 70 | 32 | 0 | 171 | 240 | 219 | 288 | 4.31e-18 | 83.2 |
| MsG0880045139.01.T01 | MTR_8g086410 | 62.500 | 56 | 21 | 0 | 169 | 224 | 110 | 165 | 8.06e-18 | 83.6 |
| MsG0880045139.01.T01 | MTR_5g027440 | 69.811 | 53 | 16 | 0 | 171 | 223 | 26 | 78 | 8.40e-18 | 81.6 |
| MsG0880045139.01.T01 | MTR_3g450310 | 60.714 | 56 | 22 | 0 | 171 | 226 | 20 | 75 | 9.32e-18 | 80.1 |
| MsG0880045139.01.T01 | MTR_2g027860 | 45.631 | 103 | 51 | 3 | 172 | 274 | 51 | 148 | 1.41e-17 | 81.6 |
| MsG0880045139.01.T01 | MTR_7g115530 | 59.677 | 62 | 25 | 0 | 171 | 232 | 219 | 280 | 2.93e-17 | 81.3 |
| MsG0880045139.01.T01 | MTR_2g016220 | 58.462 | 65 | 23 | 1 | 169 | 229 | 88 | 152 | 4.41e-17 | 80.9 |
| MsG0880045139.01.T01 | MTR_7g088070 | 46.237 | 93 | 47 | 2 | 172 | 263 | 52 | 142 | 8.31e-17 | 79.0 |
| MsG0880045139.01.T01 | MTR_7g088070 | 50.000 | 78 | 38 | 1 | 172 | 249 | 52 | 128 | 1.19e-16 | 78.6 |
| MsG0880045139.01.T01 | MTR_1g053835 | 52.941 | 68 | 30 | 1 | 172 | 239 | 260 | 325 | 3.39e-16 | 78.6 |
| MsG0880045139.01.T01 | MTR_1g090670 | 62.500 | 56 | 21 | 0 | 171 | 226 | 45 | 100 | 6.78e-16 | 76.6 |
| MsG0880045139.01.T01 | MTR_6g444980 | 58.929 | 56 | 23 | 0 | 171 | 226 | 36 | 91 | 1.65e-15 | 76.3 |
| MsG0880045139.01.T01 | MTR_6g444980 | 58.929 | 56 | 23 | 0 | 171 | 226 | 36 | 91 | 1.67e-15 | 76.3 |
| MsG0880045139.01.T01 | MTR_5g041350 | 43.590 | 78 | 44 | 0 | 171 | 248 | 16 | 93 | 2.34e-15 | 75.9 |
| MsG0880045139.01.T01 | MTR_2g027800 | 60.714 | 56 | 22 | 0 | 171 | 226 | 40 | 95 | 3.01e-15 | 75.1 |
| MsG0880045139.01.T01 | MTR_7g115530 | 63.462 | 52 | 19 | 0 | 171 | 222 | 219 | 270 | 3.16e-15 | 74.7 |
| MsG0880045139.01.T01 | MTR_2g027800 | 62.264 | 53 | 20 | 0 | 171 | 223 | 40 | 92 | 5.30e-15 | 73.9 |
| MsG0880045139.01.T01 | MTR_7g115530 | 66.000 | 50 | 17 | 0 | 171 | 220 | 219 | 268 | 6.10e-15 | 73.6 |
| MsG0880045139.01.T01 | MTR_6g032990 | 60.377 | 53 | 21 | 0 | 171 | 223 | 43 | 95 | 6.13e-15 | 74.7 |
| MsG0880045139.01.T01 | MTR_2g086450 | 57.143 | 56 | 24 | 0 | 171 | 226 | 46 | 101 | 1.24e-14 | 73.9 |
| MsG0880045139.01.T01 | MTR_4g081710 | 55.357 | 56 | 25 | 0 | 171 | 226 | 18 | 73 | 1.41e-14 | 73.2 |
| MsG0880045139.01.T01 | MTR_1g053830 | 44.444 | 72 | 38 | 1 | 172 | 243 | 20 | 89 | 2.20e-13 | 65.5 |
| MsG0880045139.01.T01 | MTR_7g068600 | 54.237 | 59 | 24 | 1 | 172 | 227 | 15 | 73 | 5.41e-13 | 67.4 |
| MsG0880045139.01.T01 | MTR_1g053800 | 45.122 | 82 | 40 | 1 | 143 | 224 | 155 | 231 | 1.41e-12 | 67.4 |
| MsG0880045139.01.T01 | MTR_4g086835 | 50.000 | 72 | 34 | 1 | 165 | 236 | 269 | 338 | 3.69e-12 | 66.6 |
| MsG0880045139.01.T01 | MTR_4g113140 | 47.297 | 74 | 36 | 1 | 164 | 237 | 229 | 299 | 8.23e-12 | 65.5 |
| MsG0880045139.01.T01 | MTR_1g093080 | 32.692 | 156 | 78 | 4 | 83 | 238 | 149 | 277 | 2.72e-11 | 63.9 |
| MsG0880045139.01.T01 | MTR_7g093010 | 33.884 | 121 | 77 | 1 | 137 | 257 | 180 | 297 | 3.17e-11 | 63.5 |
| MsG0880045139.01.T01 | MTR_4g086835 | 50.000 | 72 | 33 | 2 | 165 | 236 | 269 | 337 | 8.30e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045139.01.T01 | AT1G32240 | 48.955 | 335 | 116 | 13 | 1 | 289 | 1 | 326 | 6.57e-75 | 233 |
| MsG0880045139.01.T01 | AT1G32240 | 48.955 | 335 | 116 | 13 | 1 | 289 | 1 | 326 | 1.09e-74 | 234 |
| MsG0880045139.01.T01 | AT4G17695 | 42.366 | 262 | 110 | 6 | 1 | 245 | 1 | 238 | 1.22e-49 | 167 |
| MsG0880045139.01.T01 | AT5G16560 | 47.917 | 192 | 49 | 4 | 104 | 244 | 105 | 296 | 4.23e-43 | 152 |
| MsG0880045139.01.T01 | AT5G42630 | 77.333 | 75 | 17 | 0 | 165 | 239 | 100 | 174 | 5.14e-36 | 129 |
| MsG0880045139.01.T01 | AT5G42630 | 77.333 | 75 | 17 | 0 | 165 | 239 | 100 | 174 | 1.89e-35 | 129 |
| MsG0880045139.01.T01 | AT1G32240 | 55.814 | 86 | 30 | 2 | 205 | 289 | 1 | 79 | 7.33e-23 | 92.0 |
| MsG0880045139.01.T01 | AT2G38300 | 39.216 | 153 | 81 | 4 | 139 | 290 | 29 | 170 | 1.25e-22 | 96.3 |
| MsG0880045139.01.T01 | AT4G04605 | 65.574 | 61 | 21 | 0 | 169 | 229 | 13 | 73 | 2.13e-22 | 93.2 |
| MsG0880045139.01.T01 | AT1G14600 | 69.492 | 59 | 18 | 0 | 170 | 228 | 23 | 81 | 1.05e-21 | 92.0 |
| MsG0880045139.01.T01 | AT2G02060 | 74.074 | 54 | 14 | 0 | 170 | 223 | 29 | 82 | 2.14e-21 | 91.3 |
| MsG0880045139.01.T01 | AT2G02060 | 74.074 | 54 | 14 | 0 | 170 | 223 | 29 | 82 | 2.14e-21 | 91.3 |
| MsG0880045139.01.T01 | AT5G45580 | 48.936 | 94 | 40 | 2 | 171 | 256 | 8 | 101 | 5.64e-19 | 84.7 |
| MsG0880045139.01.T01 | AT5G45580 | 48.936 | 94 | 40 | 2 | 171 | 256 | 24 | 117 | 8.34e-19 | 84.7 |
| MsG0880045139.01.T01 | AT4G04580 | 64.286 | 56 | 20 | 0 | 171 | 226 | 15 | 70 | 1.17e-18 | 81.6 |
| MsG0880045139.01.T01 | AT2G40260 | 62.319 | 69 | 24 | 2 | 163 | 231 | 76 | 142 | 2.53e-18 | 84.7 |
| MsG0880045139.01.T01 | AT2G42660 | 63.158 | 57 | 21 | 0 | 171 | 227 | 51 | 107 | 6.93e-18 | 81.6 |
| MsG0880045139.01.T01 | AT2G01060 | 46.602 | 103 | 49 | 3 | 172 | 274 | 17 | 113 | 1.14e-17 | 81.6 |
| MsG0880045139.01.T01 | AT4G04555 | 60.345 | 58 | 23 | 0 | 169 | 226 | 13 | 70 | 2.67e-17 | 76.3 |
| MsG0880045139.01.T01 | AT4G28610 | 60.606 | 66 | 23 | 2 | 172 | 236 | 227 | 290 | 4.47e-17 | 81.3 |
| MsG0880045139.01.T01 | AT3G12730 | 62.500 | 56 | 21 | 0 | 171 | 226 | 24 | 79 | 7.45e-17 | 78.2 |
| MsG0880045139.01.T01 | AT3G04450 | 41.748 | 103 | 46 | 1 | 172 | 274 | 200 | 288 | 3.40e-16 | 78.6 |
| MsG0880045139.01.T01 | AT3G04450 | 41.748 | 103 | 46 | 1 | 172 | 274 | 200 | 288 | 3.40e-16 | 78.6 |
| MsG0880045139.01.T01 | AT3G04450 | 41.748 | 103 | 46 | 1 | 172 | 274 | 240 | 328 | 3.97e-16 | 78.6 |
| MsG0880045139.01.T01 | AT3G24120 | 62.264 | 53 | 20 | 0 | 171 | 223 | 42 | 94 | 4.54e-16 | 77.0 |
| MsG0880045139.01.T01 | AT3G24120 | 62.264 | 53 | 20 | 0 | 171 | 223 | 42 | 94 | 4.62e-16 | 77.0 |
| MsG0880045139.01.T01 | AT5G29000 | 52.778 | 72 | 34 | 0 | 172 | 243 | 233 | 304 | 5.40e-16 | 77.0 |
| MsG0880045139.01.T01 | AT3G04450 | 61.818 | 55 | 21 | 0 | 172 | 226 | 240 | 294 | 7.22e-16 | 76.6 |
| MsG0880045139.01.T01 | AT5G29000 | 63.636 | 55 | 20 | 0 | 172 | 226 | 190 | 244 | 1.17e-15 | 76.6 |
| MsG0880045139.01.T01 | AT5G29000 | 63.636 | 55 | 20 | 0 | 172 | 226 | 190 | 244 | 1.17e-15 | 76.6 |
| MsG0880045139.01.T01 | AT4G13640 | 60.377 | 53 | 21 | 0 | 171 | 223 | 38 | 90 | 1.37e-15 | 75.9 |
| MsG0880045139.01.T01 | AT4G13640 | 60.377 | 53 | 21 | 0 | 171 | 223 | 38 | 90 | 1.39e-15 | 75.9 |
| MsG0880045139.01.T01 | AT5G29000 | 63.636 | 55 | 20 | 0 | 172 | 226 | 233 | 287 | 1.57e-15 | 76.6 |
| MsG0880045139.01.T01 | AT1G79430 | 58.929 | 56 | 23 | 0 | 171 | 226 | 35 | 90 | 1.68e-15 | 76.3 |
| MsG0880045139.01.T01 | AT2G20400 | 45.745 | 94 | 47 | 2 | 172 | 263 | 233 | 324 | 4.28e-15 | 75.1 |
| MsG0880045139.01.T01 | AT5G06800 | 53.333 | 60 | 28 | 0 | 167 | 226 | 189 | 248 | 5.57e-15 | 73.9 |
| MsG0880045139.01.T01 | AT2G20400 | 60.000 | 60 | 24 | 0 | 172 | 231 | 233 | 292 | 9.48e-15 | 74.3 |
| MsG0880045139.01.T01 | AT5G18240 | 55.357 | 56 | 25 | 0 | 171 | 226 | 46 | 101 | 1.13e-14 | 73.9 |
| MsG0880045139.01.T01 | AT5G18240 | 55.357 | 56 | 25 | 0 | 171 | 226 | 46 | 101 | 1.13e-14 | 73.9 |
| MsG0880045139.01.T01 | AT5G18240 | 55.357 | 56 | 25 | 0 | 171 | 226 | 46 | 101 | 1.24e-14 | 73.9 |
| MsG0880045139.01.T01 | AT5G18240 | 55.357 | 56 | 25 | 0 | 171 | 226 | 46 | 101 | 1.34e-14 | 73.9 |
| MsG0880045139.01.T01 | AT5G18240 | 55.357 | 56 | 25 | 0 | 171 | 226 | 46 | 101 | 1.34e-14 | 73.9 |
| MsG0880045139.01.T01 | AT3G04030 | 53.571 | 56 | 26 | 0 | 171 | 226 | 46 | 101 | 1.41e-14 | 73.6 |
| MsG0880045139.01.T01 | AT3G04030 | 53.571 | 56 | 26 | 0 | 171 | 226 | 46 | 101 | 1.55e-14 | 73.6 |
| MsG0880045139.01.T01 | AT5G06800 | 53.333 | 60 | 28 | 0 | 167 | 226 | 189 | 248 | 1.62e-14 | 73.6 |
| MsG0880045139.01.T01 | AT5G06800 | 53.333 | 60 | 28 | 0 | 167 | 226 | 189 | 248 | 1.74e-14 | 73.6 |
| MsG0880045139.01.T01 | AT3G13040 | 61.818 | 55 | 21 | 0 | 172 | 226 | 243 | 297 | 3.43e-14 | 72.8 |
| MsG0880045139.01.T01 | AT3G13040 | 61.818 | 55 | 21 | 0 | 172 | 226 | 243 | 297 | 3.43e-14 | 72.8 |
| MsG0880045139.01.T01 | AT3G13040 | 61.818 | 55 | 21 | 0 | 172 | 226 | 243 | 297 | 3.43e-14 | 72.8 |
| MsG0880045139.01.T01 | AT2G06020 | 49.333 | 75 | 37 | 1 | 156 | 230 | 73 | 146 | 4.22e-14 | 71.6 |
| MsG0880045139.01.T01 | AT1G69580 | 51.786 | 56 | 27 | 0 | 171 | 226 | 35 | 90 | 8.61e-14 | 71.2 |
| MsG0880045139.01.T01 | AT1G69580 | 51.786 | 56 | 27 | 0 | 171 | 226 | 35 | 90 | 9.71e-14 | 70.9 |
| MsG0880045139.01.T01 | AT3G04030 | 51.786 | 56 | 26 | 1 | 171 | 226 | 46 | 100 | 4.42e-12 | 66.2 |
| MsG0880045139.01.T01 | AT2G03500 | 53.448 | 58 | 27 | 0 | 166 | 223 | 229 | 286 | 8.91e-12 | 65.5 |
Find 57 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTTCTCTTTCCAATCTA+AGG | 0.141226 | 8:-54829642 | MsG0880045139.01.T01:CDS |
| TGTTCATGCTGTTGAGCTTT+TGG | 0.175843 | 8:-54829260 | MsG0880045139.01.T01:CDS |
| CAAGATGAGTTGGATGATTT+AGG | 0.214915 | 8:-54829715 | MsG0880045139.01.T01:CDS |
| AGTTGGATGATTTAGGATTC+TGG | 0.227254 | 8:-54829708 | MsG0880045139.01.T01:CDS |
| TTAAGCTTTGGTAATTGTTT+TGG | 0.233379 | 8:+54829521 | None:intergenic |
| CATTAGCTCAAGAACTGATT+TGG | 0.260573 | 8:+54829001 | None:intergenic |
| TACACTGGAATTCCTCTTAT+AGG | 0.266139 | 8:+54829475 | None:intergenic |
| ATTGGAAAGAGAAGGGTTAA+AGG | 0.279584 | 8:+54829648 | None:intergenic |
| ACATGTTAAATCTCATTTAC+AGG | 0.296664 | 8:-54828955 | MsG0880045139.01.T01:intron |
| CAAAGCTTAAGTGAAGAGTT+AGG | 0.304469 | 8:-54829508 | MsG0880045139.01.T01:CDS |
| GGTACGAAAATTTACTTTCA+TGG | 0.315520 | 8:+54829233 | None:intergenic |
| AATAAAGCAATAGAAGGATT+AGG | 0.317571 | 8:+54829442 | None:intergenic |
| CTTGATGTTTGTTTGCTGTT+TGG | 0.333293 | 8:+54829760 | None:intergenic |
| CAAATCAGTTCTTGAGCTAA+TGG | 0.343450 | 8:-54829000 | MsG0880045139.01.T01:CDS |
| ATAAAGCAATAGAAGGATTA+GGG | 0.352793 | 8:+54829443 | None:intergenic |
| ATTTCTGCATCCAACTTAAC+TGG | 0.356971 | 8:+54827259 | None:intergenic |
| AATGAGATTTAACATGTGAT+AGG | 0.371948 | 8:+54828961 | None:intergenic |
| CTAACTCTTCACTTAAGCTT+TGG | 0.376994 | 8:+54829509 | None:intergenic |
| GCATTTGGAGCAAATCTTCC+AGG | 0.379781 | 8:-54827210 | MsG0880045139.01.T01:CDS |
| ATTAGCTCAAGAACTGATTT+GGG | 0.410489 | 8:+54829002 | None:intergenic |
| AGGATTCTGGAAAAGAGCTT+TGG | 0.413378 | 8:-54829695 | MsG0880045139.01.T01:CDS |
| AAAGCTTAAGTGAAGAGTTA+GGG | 0.427487 | 8:-54829507 | MsG0880045139.01.T01:CDS |
| ATGTATGACAATGGTTCATC+TGG | 0.431132 | 8:-54827340 | MsG0880045139.01.T01:CDS |
| GCTCTCACGCTGCGCTTTGA+AGG | 0.432112 | 8:+54829322 | None:intergenic |
| TGAGAAAATAAAGCAATAGA+AGG | 0.441258 | 8:+54829436 | None:intergenic |
| AGAAGAAGCAGCCCTTAGAT+TGG | 0.445875 | 8:+54829630 | None:intergenic |
| CCCTTCTCTTTCCAATCTAA+GGG | 0.458265 | 8:-54829641 | MsG0880045139.01.T01:CDS |
| TAATGATCTGCCAGTTAAGT+TGG | 0.466844 | 8:-54827269 | MsG0880045139.01.T01:CDS |
| AATGATAAATCTAGTTGTGC+TGG | 0.487533 | 8:+54829796 | None:intergenic |
| TACAGATGATCAAGATGAGT+TGG | 0.492255 | 8:-54829725 | MsG0880045139.01.T01:CDS |
| GGGTTTCTCAAACCTATAAG+AGG | 0.493525 | 8:-54829487 | MsG0880045139.01.T01:CDS |
| TAAATTTATATTAGATGTAC+CGG | 0.494213 | 8:-54827528 | MsG0880045139.01.T01:intron |
| TGGTTGAAAAGAGTTATTGT+TGG | 0.506043 | 8:+54829555 | None:intergenic |
| GATAGACCACCAGCATCATC+AGG | 0.511405 | 8:-54827490 | MsG0880045139.01.T01:intron |
| ATGAGATTTAACATGTGATA+GGG | 0.516911 | 8:+54828962 | None:intergenic |
| GCCCTTAGATTGGAAAGAGA+AGG | 0.518621 | 8:+54829640 | None:intergenic |
| TCTTGAGCTAATGGATGTAA+AGG | 0.520433 | 8:-54828991 | MsG0880045139.01.T01:CDS |
| CTTGAAGCAGAAGCATCAAA+AGG | 0.544886 | 8:+54829403 | None:intergenic |
| GTGGTAGTCCAACGCATCCT+CGG | 0.547370 | 8:+54829298 | None:intergenic |
| TGAGAGCTCCGAGGATGCGT+TGG | 0.564823 | 8:-54829306 | MsG0880045139.01.T01:CDS |
| CCCTTAGATTGGAAAGAGAA+GGG | 0.569429 | 8:+54829641 | None:intergenic |
| GCAAACAAACATCAAGTTGG+AGG | 0.579839 | 8:-54829753 | MsG0880045139.01.T01:CDS |
| GAAGCATCAAAAGGTGGTTG+TGG | 0.580777 | 8:+54829412 | None:intergenic |
| ACAGCAAACAAACATCAAGT+TGG | 0.580847 | 8:-54829756 | MsG0880045139.01.T01:CDS |
| TATCACTAACCTGATGATGC+TGG | 0.583542 | 8:+54827481 | None:intergenic |
| GGTTAGGTATGAGATTGTAG+AGG | 0.587027 | 8:+54829599 | None:intergenic |
| ATACTGTATTATATATTACC+TGG | 0.596752 | 8:+54827192 | None:intergenic |
| ATGATAAATCTAGTTGTGCT+GGG | 0.613410 | 8:+54829797 | None:intergenic |
| AACAAAGCGATTATGAAGAG+TGG | 0.613873 | 8:+54829279 | None:intergenic |
| CAATCTGATATGTATGACAA+TGG | 0.620941 | 8:-54827349 | MsG0880045139.01.T01:CDS |
| TGAGATCAAAGTTGTTGCCG+CGG | 0.651120 | 8:-54829348 | MsG0880045139.01.T01:CDS |
| TTGACATAAACTCTTCAACA+AGG | 0.659495 | 8:-54827294 | MsG0880045139.01.T01:CDS |
| GAAGCAGAAGCATCAAAAGG+TGG | 0.676780 | 8:+54829406 | None:intergenic |
| CACTAACCTGATGATGCTGG+TGG | 0.677669 | 8:+54827484 | None:intergenic |
| CTGCGCTTTGAAGGAAACCG+CGG | 0.685322 | 8:+54829331 | None:intergenic |
| TTTATATTAGATGTACCGGA+CGG | 0.686505 | 8:-54827524 | MsG0880045139.01.T01:intron |
| AGCGCAGCGTGAGAGCTCCG+AGG | 0.728362 | 8:-54829315 | MsG0880045139.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATTAATATAGTTTAAAT+TGG | - | Chr8:54829318-54829337 | MsG0880045139.01.T01:CDS | 10.0% |
| !!! | ATTATTTTTATATTTAGCTA+TGG | - | Chr8:54828354-54828373 | MsG0880045139.01.T01:intron | 10.0% |
| !!! | TATAAAAATAATTTTTGCTA+AGG | + | Chr8:54828346-54828365 | None:intergenic | 10.0% |
| !!! | TTTTAAAACAACTAAAAAAA+AGG | + | Chr8:54829144-54829163 | None:intergenic | 10.0% |
| !! | TAAATTTATATTAGATGTAC+CGG | - | Chr8:54829487-54829506 | MsG0880045139.01.T01:CDS | 15.0% |
| !! | TATTTCATTTAAATTGATAG+TGG | + | Chr8:54829355-54829374 | None:intergenic | 15.0% |
| !!! | AATTATTAGTGTTTTGAAAA+GGG | + | Chr8:54827440-54827459 | None:intergenic | 15.0% |
| !! | AAAACAACTAAAAAAAAGGA+TGG | + | Chr8:54829140-54829159 | None:intergenic | 20.0% |
| !! | AAGAAAAATCAAGAAAATAG+AGG | + | Chr8:54829626-54829645 | None:intergenic | 20.0% |
| !! | AAGATTTATTGATCAAATGA+TGG | - | Chr8:54829379-54829398 | MsG0880045139.01.T01:CDS | 20.0% |
| !! | ATAAAGAAAAACATAGCATT+TGG | - | Chr8:54829790-54829809 | MsG0880045139.01.T01:CDS | 20.0% |
| !! | ATAGTAGATGAATGAATTTA+TGG | + | Chr8:54829586-54829605 | None:intergenic | 20.0% |
| !! | CTCAATTTGTAATTAGTATT+AGG | - | Chr8:54829560-54829579 | MsG0880045139.01.T01:CDS | 20.0% |
| !! | TCTATTTGTTTATTTGGTTA+TGG | - | Chr8:54827942-54827961 | MsG0880045139.01.T01:intron | 20.0% |
| !! | TTTATATTGCACAAGAAAAT+AGG | - | Chr8:54828590-54828609 | MsG0880045139.01.T01:intron | 20.0% |
| !!! | GAATTATTAGTGTTTTGAAA+AGG | + | Chr8:54827441-54827460 | None:intergenic | 20.0% |
| !!! | GATTTTTCTTGTGTTTAAAA+TGG | - | Chr8:54829636-54829655 | MsG0880045139.01.T01:CDS | 20.0% |
| !!! | GCTAATTTTGTATTGTTAAA+TGG | - | Chr8:54827967-54827986 | MsG0880045139.01.T01:intron | 20.0% |
| !!! | GTTTTTCTTTATCTTGATTA+GGG | + | Chr8:54829782-54829801 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTTATCTTGATT+AGG | + | Chr8:54829783-54829802 | None:intergenic | 20.0% |
| !!! | TTTATAGAGTATCATTAACA+CGG | + | Chr8:54829471-54829490 | None:intergenic | 20.0% |
| ! | AATAAAGCAATAGAAGGATT+AGG | + | Chr8:54827576-54827595 | None:intergenic | 25.0% |
| ! | AATGAGATTTAACATGTGAT+AGG | + | Chr8:54828057-54828076 | None:intergenic | 25.0% |
| ! | ACATGTTAAATCTCATTTAC+AGG | - | Chr8:54828060-54828079 | MsG0880045139.01.T01:intron | 25.0% |
| ! | AGAACTTAAAATAACCTTGA+AGG | + | Chr8:54828158-54828177 | None:intergenic | 25.0% |
| ! | ATAAAGCAATAGAAGGATTA+GGG | + | Chr8:54827575-54827594 | None:intergenic | 25.0% |
| ! | ATGAGATTTAACATGTGATA+GGG | + | Chr8:54828056-54828075 | None:intergenic | 25.0% |
| ! | CACAACAAATCATATGAATT+TGG | + | Chr8:54829297-54829316 | None:intergenic | 25.0% |
| ! | GAATTTACTCAATTGATACA+TGG | + | Chr8:54828799-54828818 | None:intergenic | 25.0% |
| ! | GTTAATTATAAACTCCTTCA+AGG | - | Chr8:54828141-54828160 | MsG0880045139.01.T01:intron | 25.0% |
| ! | GTTACATAGATACTATATCA+GGG | - | Chr8:54829057-54829076 | MsG0880045139.01.T01:intron | 25.0% |
| ! | TGAACTCAAACTATATCAAT+TGG | + | Chr8:54828890-54828909 | None:intergenic | 25.0% |
| ! | TGAGAAAATAAAGCAATAGA+AGG | + | Chr8:54827582-54827601 | None:intergenic | 25.0% |
| ! | TGTTACATAGATACTATATC+AGG | - | Chr8:54829056-54829075 | MsG0880045139.01.T01:intron | 25.0% |
| !! | ACAATTTTCTCCCTTAATTA+GGG | + | Chr8:54828433-54828452 | None:intergenic | 25.0% |
| !! | ACACATTTAATCAAAAGTGT+TGG | - | Chr8:54829033-54829052 | MsG0880045139.01.T01:intron | 25.0% |
| !! | ATTTTCAACCTCAATTTCAA+AGG | + | Chr8:54828189-54828208 | None:intergenic | 25.0% |
| !! | TACAATTTTCTCCCTTAATT+AGG | + | Chr8:54828434-54828453 | None:intergenic | 25.0% |
| !!! | AAACTCGCTATAATTTTTTC+TGG | - | Chr8:54827918-54827937 | MsG0880045139.01.T01:intron | 25.0% |
| !!! | TCTGGTTCTATTTGTTTATT+TGG | - | Chr8:54827936-54827955 | MsG0880045139.01.T01:intron | 25.0% |
| !!! | TTAAGCTTTGGTAATTGTTT+TGG | + | Chr8:54827497-54827516 | None:intergenic | 25.0% |
| !!! | TTGTTTTGGTTTTGATGAAA+TGG | + | Chr8:54827483-54827502 | None:intergenic | 25.0% |
| AAAGCTTAAGTGAAGAGTTA+GGG | - | Chr8:54827508-54827527 | MsG0880045139.01.T01:CDS | 30.0% | |
| AATCCAAACATGTTCAAAGA+AGG | + | Chr8:54827806-54827825 | None:intergenic | 30.0% | |
| AATGATAAATCTAGTTGTGC+TGG | + | Chr8:54827222-54827241 | None:intergenic | 30.0% | |
| ACTATATCAATTGGATCGTT+TGG | + | Chr8:54828881-54828900 | None:intergenic | 30.0% | |
| ATGATAAATCTAGTTGTGCT+GGG | + | Chr8:54827221-54827240 | None:intergenic | 30.0% | |
| ATGGAAAATAAACTTGCGTA+TGG | - | Chr8:54829398-54829417 | MsG0880045139.01.T01:CDS | 30.0% | |
| ATTGATACATGGCTGTATAA+AGG | + | Chr8:54828788-54828807 | None:intergenic | 30.0% | |
| CAACTAAAAAAAAGGATGGT+CGG | + | Chr8:54829136-54829155 | None:intergenic | 30.0% | |
| CAATCTGATATGTATGACAA+TGG | - | Chr8:54829666-54829685 | MsG0880045139.01.T01:CDS | 30.0% | |
| CGAGTTTGACAAAATTATCA+CGG | + | Chr8:54827905-54827924 | None:intergenic | 30.0% | |
| CTTTGAACATGTTTGGATTA+AGG | - | Chr8:54827807-54827826 | MsG0880045139.01.T01:intron | 30.0% | |
| GAGAAATTCAAAATGAGTCT+TGG | - | Chr8:54828526-54828545 | MsG0880045139.01.T01:intron | 30.0% | |
| GGATATGTTTCAAATTCCAA+TGG | - | Chr8:54828313-54828332 | MsG0880045139.01.T01:intron | 30.0% | |
| GGTACGAAAATTTACTTTCA+TGG | + | Chr8:54827785-54827804 | None:intergenic | 30.0% | |
| TGGAAAATAAACTTGCGTAT+GGG | - | Chr8:54829399-54829418 | MsG0880045139.01.T01:CDS | 30.0% | |
| TGGTTGAAAAGAGTTATTGT+TGG | + | Chr8:54827463-54827482 | None:intergenic | 30.0% | |
| TGTATTGTTAAATGGTGTTC+TGG | - | Chr8:54827975-54827994 | MsG0880045139.01.T01:intron | 30.0% | |
| TTGAAAAATGTGACTAACCA+TGG | + | Chr8:54828711-54828730 | None:intergenic | 30.0% | |
| TTGACATAAACTCTTCAACA+AGG | - | Chr8:54829721-54829740 | MsG0880045139.01.T01:CDS | 30.0% | |
| TTGCTAAGGAAATTAACCAT+TGG | + | Chr8:54828332-54828351 | None:intergenic | 30.0% | |
| TTTATATTAGATGTACCGGA+CGG | - | Chr8:54829491-54829510 | MsG0880045139.01.T01:CDS | 30.0% | |
| TTTGACAAAATTATCACGGT+GGG | + | Chr8:54827901-54827920 | None:intergenic | 30.0% | |
| ! | ATTAGCTCAAGAACTGATTT+GGG | + | Chr8:54828016-54828035 | None:intergenic | 30.0% |
| ! | CTAGTTTGTAATGTAGTACA+AGG | - | Chr8:54828276-54828295 | MsG0880045139.01.T01:intron | 30.0% |
| ! | TCTTGTGTTTAAAATGGAGT+AGG | - | Chr8:54829642-54829661 | MsG0880045139.01.T01:CDS | 30.0% |
| !! | TAAATGGTGTTCTGGATTTT+AGG | - | Chr8:54827983-54828002 | MsG0880045139.01.T01:intron | 30.0% |
| !!! | CGATGACACATTATTTTTGT+CGG | - | Chr8:54827848-54827867 | MsG0880045139.01.T01:intron | 30.0% |
| !!! | TTAGTGTTTTGAAAAGGGTT+AGG | + | Chr8:54827435-54827454 | None:intergenic | 30.0% |
| AACAAAGCGATTATGAAGAG+TGG | + | Chr8:54827739-54827758 | None:intergenic | 35.0% | |
| AATTTGGTTATGACTCGTGA+GGG | + | Chr8:54829281-54829300 | None:intergenic | 35.0% | |
| ACAGCAAACAAACATCAAGT+TGG | - | Chr8:54827259-54827278 | MsG0880045139.01.T01:CDS | 35.0% | |
| AGAATGAACCACCCTAATTA+AGG | - | Chr8:54828419-54828438 | MsG0880045139.01.T01:intron | 35.0% | |
| ATGCAGAAAACAAATGGTTC+TGG | + | Chr8:54828756-54828775 | None:intergenic | 35.0% | |
| ATGTATGACAATGGTTCATC+TGG | - | Chr8:54829675-54829694 | MsG0880045139.01.T01:CDS | 35.0% | |
| ATTGGAAAGAGAAGGGTTAA+AGG | + | Chr8:54827370-54827389 | None:intergenic | 35.0% | |
| ATTTCTGCATCCAACTTAAC+TGG | + | Chr8:54829759-54829778 | None:intergenic | 35.0% | |
| CAAAGCTTAAGTGAAGAGTT+AGG | - | Chr8:54827507-54827526 | MsG0880045139.01.T01:CDS | 35.0% | |
| CAAATCAGTTCTTGAGCTAA+TGG | - | Chr8:54828015-54828034 | MsG0880045139.01.T01:intron | 35.0% | |
| CAAATTCCACTATTGATGTG+TGG | - | Chr8:54829089-54829108 | MsG0880045139.01.T01:intron | 35.0% | |
| CATTAGCTCAAGAACTGATT+TGG | + | Chr8:54828017-54828036 | None:intergenic | 35.0% | |
| CTAACTCTTCACTTAAGCTT+TGG | + | Chr8:54827509-54827528 | None:intergenic | 35.0% | |
| CTATGTCAACGTGTTTGTAT+CGG | + | Chr8:54828947-54828966 | None:intergenic | 35.0% | |
| GAATGAACCACCCTAATTAA+GGG | - | Chr8:54828420-54828439 | MsG0880045139.01.T01:intron | 35.0% | |
| GTACCTTCTTTGAACATGTT+TGG | - | Chr8:54827800-54827819 | MsG0880045139.01.T01:intron | 35.0% | |
| GTTTGACAAAATTATCACGG+TGG | + | Chr8:54827902-54827921 | None:intergenic | 35.0% | |
| TAATGATCTGCCAGTTAAGT+TGG | - | Chr8:54829746-54829765 | MsG0880045139.01.T01:CDS | 35.0% | |
| TACACTGGAATTCCTCTTAT+AGG | + | Chr8:54827543-54827562 | None:intergenic | 35.0% | |
| TACAGATGATCAAGATGAGT+TGG | - | Chr8:54827290-54827309 | MsG0880045139.01.T01:CDS | 35.0% | |
| TAGCTGATGCAGAAAACAAA+TGG | + | Chr8:54828762-54828781 | None:intergenic | 35.0% | |
| TTGTAATGTAGTACAAGGAG+TGG | - | Chr8:54828281-54828300 | MsG0880045139.01.T01:intron | 35.0% | |
| ! | AGACTAAGTAGCTTTTTGCT+TGG | - | Chr8:54828395-54828414 | MsG0880045139.01.T01:intron | 35.0% |
| ! | AGTTGGATGATTTAGGATTC+TGG | - | Chr8:54827307-54827326 | MsG0880045139.01.T01:CDS | 35.0% |
| ! | ATTCTCATTTTGCCCACTTT+AGG | - | Chr8:54829244-54829263 | MsG0880045139.01.T01:intron | 35.0% |
| ! | ATTTTCTCCCTTAATTAGGG+TGG | + | Chr8:54828430-54828449 | None:intergenic | 35.0% |
| ! | CAAGATGAGTTGGATGATTT+AGG | - | Chr8:54827300-54827319 | MsG0880045139.01.T01:CDS | 35.0% |
| ! | TATCGTATCAGCTTTAACCA+TGG | - | Chr8:54828691-54828710 | MsG0880045139.01.T01:intron | 35.0% |
| ! | TATCTGTAATTTTCACCGTC+CGG | + | Chr8:54829509-54829528 | None:intergenic | 35.0% |
| ! | TCTTGAGCTAATGGATGTAA+AGG | - | Chr8:54828024-54828043 | MsG0880045139.01.T01:intron | 35.0% |
| !! | CTTGATGTTTGTTTGCTGTT+TGG | + | Chr8:54827258-54827277 | None:intergenic | 35.0% |
| !! | GTTCTGATTGCGTGTTTTAA+TGG | - | Chr8:54828215-54828234 | MsG0880045139.01.T01:intron | 35.0% |
| !! | TCTGTAGTCCTTTGAAATTG+AGG | - | Chr8:54828178-54828197 | MsG0880045139.01.T01:intron | 35.0% |
| !! | TTAGGGTTTTGATGATACAC+TGG | + | Chr8:54827558-54827577 | None:intergenic | 35.0% |
| !!! | AACAAATGGTTCTGGTTTTC+TGG | + | Chr8:54828748-54828767 | None:intergenic | 35.0% |
| !!! | TTCTGGTTTTCTGGTAAATG+TGG | + | Chr8:54828739-54828758 | None:intergenic | 35.0% |
| AATGTAGTACAAGGAGTGGT+TGG | - | Chr8:54828285-54828304 | MsG0880045139.01.T01:intron | 40.0% | |
| ACCCTTCTCTTTCCAATCTA+AGG | - | Chr8:54827373-54827392 | MsG0880045139.01.T01:intron | 40.0% | |
| CAAGATCCACACATCAATAG+TGG | + | Chr8:54829098-54829117 | None:intergenic | 40.0% | |
| CACTATTGATGTGTGGATCT+TGG | - | Chr8:54829096-54829115 | MsG0880045139.01.T01:intron | 40.0% | |
| CCCTTAGATTGGAAAGAGAA+GGG | + | Chr8:54827377-54827396 | None:intergenic | 40.0% | |
| CCCTTCTCTTTCCAATCTAA+GGG | - | Chr8:54827374-54827393 | MsG0880045139.01.T01:intron | 40.0% | |
| GAATTTGGTTATGACTCGTG+AGG | + | Chr8:54829282-54829301 | None:intergenic | 40.0% | |
| GGGTTTCTCAAACCTATAAG+AGG | - | Chr8:54827528-54827547 | MsG0880045139.01.T01:intron | 40.0% | |
| GGTTAGGTATGAGATTGTAG+AGG | + | Chr8:54827419-54827438 | None:intergenic | 40.0% | |
| ! | AGGATTCTGGAAAAGAGCTT+TGG | - | Chr8:54827320-54827339 | MsG0880045139.01.T01:CDS | 40.0% |
| ! | GTTCATGCTGTTGAGCTTTT+GGG | - | Chr8:54827756-54827775 | MsG0880045139.01.T01:intron | 40.0% |
| ! | TATCACTAACCTGATGATGC+TGG | + | Chr8:54829537-54829556 | None:intergenic | 40.0% |
| ! | TCATTTTGCCCACTTTAGGT+GGG | - | Chr8:54829248-54829267 | MsG0880045139.01.T01:CDS | 40.0% |
| ! | TGTTCATGCTGTTGAGCTTT+TGG | - | Chr8:54827755-54827774 | MsG0880045139.01.T01:intron | 40.0% |
| !! | CTTGAAGCAGAAGCATCAAA+AGG | + | Chr8:54827615-54827634 | None:intergenic | 40.0% |
| !! | GCAAACAAACATCAAGTTGG+AGG | - | Chr8:54827262-54827281 | MsG0880045139.01.T01:CDS | 40.0% |
| !! | TACAAGGAGTGGTTGGTTTA+TGG | - | Chr8:54828292-54828311 | MsG0880045139.01.T01:intron | 40.0% |
| AGAAGAAGCAGCCCTTAGAT+TGG | + | Chr8:54827388-54827407 | None:intergenic | 45.0% | |
| GCCCTTAGATTGGAAAGAGA+AGG | + | Chr8:54827378-54827397 | None:intergenic | 45.0% | |
| TGAGATCAAAGTTGTTGCCG+CGG | - | Chr8:54827667-54827686 | MsG0880045139.01.T01:intron | 45.0% | |
| TGATGTGTGGATCTTGGTAG+CGG | - | Chr8:54829102-54829121 | MsG0880045139.01.T01:intron | 45.0% | |
| ! | CTCATTTTGCCCACTTTAGG+TGG | - | Chr8:54829247-54829266 | MsG0880045139.01.T01:intron | 45.0% |
| ! | GAAGCATCAAAAGGTGGTTG+TGG | + | Chr8:54827606-54827625 | None:intergenic | 45.0% |
| ! | GCATTTGGAGCAAATCTTCC+AGG | - | Chr8:54829805-54829824 | MsG0880045139.01.T01:CDS | 45.0% |
| !! | GAAGCAGAAGCATCAAAAGG+TGG | + | Chr8:54827612-54827631 | None:intergenic | 45.0% |
| ATCCTCTCCTCTGTCATGAC+TGG | - | Chr8:54828658-54828677 | MsG0880045139.01.T01:intron | 50.0% | |
| GATAGACCACCAGCATCATC+AGG | - | Chr8:54829525-54829544 | MsG0880045139.01.T01:CDS | 50.0% | |
| TATCGGCAGTGTGTCTGATG+TGG | + | Chr8:54828930-54828949 | None:intergenic | 50.0% | |
| TCCTCTCCTCTGTCATGACT+GGG | - | Chr8:54828659-54828678 | MsG0880045139.01.T01:intron | 50.0% | |
| ! | CACTAACCTGATGATGCTGG+TGG | + | Chr8:54829534-54829553 | None:intergenic | 50.0% |
| ! | CATGCTGTTGAGCTTTTGGG+TGG | - | Chr8:54827759-54827778 | MsG0880045139.01.T01:intron | 50.0% |
| ! | TTTTGCCCACTTTAGGTGGG+AGG | - | Chr8:54829251-54829270 | MsG0880045139.01.T01:CDS | 50.0% |
| CCTCTCCTCTGTCATGACTG+GGG | - | Chr8:54828660-54828679 | MsG0880045139.01.T01:intron | 55.0% | |
| GAACTCCCCAGTCATGACAG+AGG | + | Chr8:54828668-54828687 | None:intergenic | 55.0% | |
| GTGGTAGTCCAACGCATCCT+CGG | + | Chr8:54827720-54827739 | None:intergenic | 55.0% | |
| GTTCGCCTCCCACCTAAAGT+GGG | + | Chr8:54829259-54829278 | None:intergenic | 55.0% | |
| !! | CTGCGCTTTGAAGGAAACCG+CGG | + | Chr8:54827687-54827706 | None:intergenic | 55.0% |
| CCCCAGTCATGACAGAGGAG+AGG | + | Chr8:54828663-54828682 | None:intergenic | 60.0% | |
| GCTCTCACGCTGCGCTTTGA+AGG | + | Chr8:54827696-54827715 | None:intergenic | 60.0% | |
| GGTTCGCCTCCCACCTAAAG+TGG | + | Chr8:54829260-54829279 | None:intergenic | 60.0% | |
| TGAGAGCTCCGAGGATGCGT+TGG | - | Chr8:54827709-54827728 | MsG0880045139.01.T01:intron | 60.0% | |
| AGCGCAGCGTGAGAGCTCCG+AGG | - | Chr8:54827700-54827719 | MsG0880045139.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 54827207 | 54829830 | 54827207 | ID=MsG0880045139.01;Name=MsG0880045139.01 |
| Chr8 | mRNA | 54827207 | 54829830 | 54827207 | ID=MsG0880045139.01.T01;Parent=MsG0880045139.01;Name=MsG0880045139.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|4|0|290 |
| Chr8 | exon | 54829248 | 54829830 | 54829248 | ID=MsG0880045139.01.T01:exon:23660;Parent=MsG0880045139.01.T01 |
| Chr8 | exon | 54828956 | 54829032 | 54828956 | ID=MsG0880045139.01.T01:exon:23659;Parent=MsG0880045139.01.T01 |
| Chr8 | exon | 54827491 | 54827536 | 54827491 | ID=MsG0880045139.01.T01:exon:23658;Parent=MsG0880045139.01.T01 |
| Chr8 | exon | 54827207 | 54827373 | 54827207 | ID=MsG0880045139.01.T01:exon:23657;Parent=MsG0880045139.01.T01 |
| Chr8 | CDS | 54829248 | 54829830 | 54829248 | ID=MsG0880045139.01.T01:cds;Parent=MsG0880045139.01.T01 |
| Chr8 | CDS | 54828956 | 54829032 | 54828956 | ID=MsG0880045139.01.T01:cds;Parent=MsG0880045139.01.T01 |
| Chr8 | CDS | 54827491 | 54827536 | 54827491 | ID=MsG0880045139.01.T01:cds;Parent=MsG0880045139.01.T01 |
| Chr8 | CDS | 54827207 | 54827373 | 54827207 | ID=MsG0880045139.01.T01:cds;Parent=MsG0880045139.01.T01 |
| Gene Sequence |
| Protein sequence |
