AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011258.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011258.01.T01 MTR_2g100780 87.823 271 13 5 1 254 1 268 2.27e-158 441
MsG0280011258.01.T01 MTR_2g100780 87.786 262 12 5 1 245 1 259 6.19e-152 425
MsG0280011258.01.T01 MTR_8g014520 49.818 275 94 10 6 247 4 267 2.30e-66 207
MsG0280011258.01.T01 MTR_8g014520 50.000 272 92 10 6 244 4 264 6.01e-66 206
MsG0280011258.01.T01 MTR_6g488150 34.348 230 132 6 18 240 21 238 1.72e-30 114
MsG0280011258.01.T01 MTR_1g069495 48.673 113 49 2 133 240 144 252 3.97e-30 114
MsG0280011258.01.T01 MTR_5g030710 43.846 130 65 3 111 240 198 319 1.23e-26 106
MsG0280011258.01.T01 MTR_8g103030 46.491 114 60 1 127 240 165 277 1.55e-26 105
MsG0280011258.01.T01 MTR_2g101500 44.800 125 61 3 116 240 194 310 1.36e-24 100
MsG0280011258.01.T01 MTR_5g067350 47.273 110 53 3 131 240 227 331 4.10e-24 99.8
MsG0280011258.01.T01 MTR_8g067530 44.828 116 60 3 126 240 228 340 1.48e-23 98.2
MsG0280011258.01.T01 MTR_1g080860 47.273 110 48 4 134 240 135 237 2.56e-23 95.9
MsG0280011258.01.T01 MTR_1g080860 47.273 110 48 4 134 240 135 237 3.15e-23 95.5
MsG0280011258.01.T01 MTR_1g070520 37.838 148 74 3 93 240 100 229 4.61e-23 94.7
MsG0280011258.01.T01 MTR_7g110790 33.333 156 77 5 84 237 25 155 4.00e-22 90.1
MsG0280011258.01.T01 MTR_1g093240 44.762 105 54 2 136 240 120 220 8.31e-22 91.3
MsG0280011258.01.T01 MTR_1g093240 44.762 105 54 2 136 240 120 220 1.07e-21 91.3
MsG0280011258.01.T01 MTR_1g040675 31.489 235 96 7 13 240 2 178 2.03e-21 89.0
MsG0280011258.01.T01 MTR_7g096090 45.714 105 53 2 136 240 134 234 3.84e-21 89.7
MsG0280011258.01.T01 MTR_1g076270 42.991 107 44 3 134 240 85 174 4.48e-21 87.8
MsG0280011258.01.T01 MTR_1g093350 42.991 107 44 3 134 240 85 174 4.48e-21 87.8
MsG0280011258.01.T01 MTR_4g124300 40.000 105 46 2 134 238 94 181 1.20e-20 87.0
MsG0280011258.01.T01 MTR_1g085750 34.014 147 65 6 109 244 49 174 8.86e-19 81.6
MsG0280011258.01.T01 MTR_1g070830 39.252 107 48 3 134 240 108 197 2.21e-18 81.3
MsG0280011258.01.T01 MTR_2g102490 39.048 105 54 2 136 239 88 183 9.78e-18 79.3
MsG0280011258.01.T01 MTR_4g011880 35.714 112 50 2 135 244 75 166 1.22e-16 75.9
MsG0280011258.01.T01 MTR_1g093240 43.158 95 38 3 136 224 120 204 1.95e-14 70.5
MsG0280011258.01.T01 MTR_4g115075 31.452 124 59 3 115 238 109 206 8.65e-14 68.9
MsG0280011258.01.T01 MTR_1g040675 29.954 217 89 8 13 223 2 161 6.55e-13 65.5
MsG0280011258.01.T01 MTR_1g085750 31.746 126 57 5 109 223 49 156 3.44e-12 63.5
MsG0280011258.01.T01 MTR_3g106850 31.250 112 55 3 129 240 120 209 1.73e-11 62.4
MsG0280011258.01.T01 MTR_7g062540 25.946 185 90 5 58 241 516 654 2.41e-11 63.9
MsG0280011258.01.T01 MTR_1g109510 34.314 102 49 2 136 237 85 168 5.48e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011258.01.T01 AT3G16500 50.644 233 106 3 11 243 32 255 1.45e-65 205
MsG0280011258.01.T01 AT3G16500 50.644 233 106 3 11 243 32 255 1.59e-65 205
MsG0280011258.01.T01 AT1G51950 46.914 243 92 7 12 243 37 253 1.22e-55 180
MsG0280011258.01.T01 AT1G04550 48.760 121 50 4 126 245 115 224 1.01e-30 115
MsG0280011258.01.T01 AT5G25890 35.683 227 79 6 13 239 3 162 3.82e-30 111
MsG0280011258.01.T01 AT2G33310 52.381 105 42 2 136 240 130 226 6.20e-30 113
MsG0280011258.01.T01 AT2G33310 52.381 105 42 2 136 240 130 226 6.20e-30 113
MsG0280011258.01.T01 AT2G33310 52.381 105 42 2 136 240 131 227 6.21e-30 113
MsG0280011258.01.T01 AT4G28640 50.943 106 47 2 135 240 137 237 1.53e-28 109
MsG0280011258.01.T01 AT4G28640 49.541 109 50 2 135 243 137 240 1.75e-28 109
MsG0280011258.01.T01 AT4G28640 50.943 106 47 2 135 240 137 237 1.07e-27 108
MsG0280011258.01.T01 AT1G04100 42.537 134 72 2 109 239 123 254 5.67e-27 105
MsG0280011258.01.T01 AT4G29080 32.184 261 130 10 15 240 41 289 9.04e-25 100
MsG0280011258.01.T01 AT5G65670 42.609 115 64 2 126 240 208 320 1.11e-23 98.6
MsG0280011258.01.T01 AT5G65670 42.609 115 64 2 126 240 208 320 1.12e-23 98.6
MsG0280011258.01.T01 AT2G22670 45.283 106 56 2 135 240 200 303 9.78e-23 95.5
MsG0280011258.01.T01 AT2G22670 45.283 106 56 2 135 240 200 303 9.78e-23 95.5
MsG0280011258.01.T01 AT2G22670 45.283 106 56 2 135 240 200 303 1.09e-22 95.5
MsG0280011258.01.T01 AT2G22670 45.283 106 56 2 135 240 200 303 1.09e-22 95.5
MsG0280011258.01.T01 AT2G22670 45.283 106 56 2 135 240 217 320 1.37e-22 95.5
MsG0280011258.01.T01 AT3G15540 39.640 111 45 2 136 244 98 188 2.39e-22 92.0
MsG0280011258.01.T01 AT1G04250 32.231 242 110 7 15 240 10 213 4.47e-22 92.0
MsG0280011258.01.T01 AT4G14550 33.990 203 113 7 72 262 40 233 5.15e-22 92.0
MsG0280011258.01.T01 AT4G14550 35.912 181 96 6 72 240 40 212 1.05e-21 90.9
MsG0280011258.01.T01 AT3G04730 42.857 105 56 2 136 240 120 220 1.16e-21 90.9
MsG0280011258.01.T01 AT3G23050 44.762 105 54 2 136 240 126 226 6.34e-21 89.4
MsG0280011258.01.T01 AT1G04240 27.586 174 103 3 71 240 27 181 1.29e-20 87.0
MsG0280011258.01.T01 AT1G52830 30.108 186 91 4 78 244 19 184 3.87e-20 85.9
MsG0280011258.01.T01 AT1G04240 27.586 174 103 3 71 240 127 281 8.68e-20 87.0
MsG0280011258.01.T01 AT3G17600 37.736 106 45 2 132 237 70 154 3.39e-19 82.4
MsG0280011258.01.T01 AT2G46990 38.462 104 47 2 135 238 85 171 6.79e-19 82.0
MsG0280011258.01.T01 AT3G23030 34.783 138 58 4 107 244 65 170 7.76e-19 82.0
MsG0280011258.01.T01 AT3G62100 37.500 104 48 2 135 238 83 169 7.89e-19 82.0
MsG0280011258.01.T01 AT5G43700 28.902 173 94 4 78 244 32 181 1.61e-18 81.3
MsG0280011258.01.T01 AT3G23030 34.783 138 58 4 107 244 152 257 4.78e-18 81.6
MsG0280011258.01.T01 AT4G14560 40.000 105 46 3 136 240 76 163 2.67e-17 77.8
MsG0280011258.01.T01 AT4G14550 45.455 88 44 2 136 223 112 195 3.03e-14 70.1
MsG0280011258.01.T01 AT3G23050 42.697 89 47 2 136 224 126 210 1.72e-13 68.2
MsG0280011258.01.T01 AT3G62100 37.079 89 39 2 135 223 83 154 4.14e-13 65.9
MsG0280011258.01.T01 AT4G23980 34.259 108 48 1 138 245 527 611 6.03e-13 68.9
MsG0280011258.01.T01 AT4G23980 34.259 108 48 1 138 245 525 609 6.07e-13 68.9
MsG0280011258.01.T01 AT2G46990 37.079 89 39 2 135 223 85 156 9.38e-13 65.1
MsG0280011258.01.T01 AT4G32280 29.464 112 56 2 135 246 118 206 5.88e-12 63.9
MsG0280011258.01.T01 AT4G32280 29.464 112 56 2 135 246 160 248 9.56e-12 63.9
MsG0280011258.01.T01 AT3G61830 23.721 215 118 5 31 245 358 526 1.72e-11 64.3
MsG0280011258.01.T01 AT3G61830 23.721 215 118 5 31 245 409 577 1.92e-11 64.3
MsG0280011258.01.T01 AT2G46530 31.429 105 49 1 137 241 406 487 1.98e-11 64.3
MsG0280011258.01.T01 AT2G46530 31.429 105 49 1 137 241 493 574 2.53e-11 63.9
MsG0280011258.01.T01 AT2G46530 31.429 105 49 1 137 241 514 595 3.29e-11 63.5

Find 71 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAGATTTGAAATGTTTA+TGG 0.145528 2:-81561633 MsG0280011258.01.T01:three_prime_UTR
TGCTGTTGAGTCTGAGATTC+TGG 0.161798 2:+81563341 None:intergenic
AACATATATTAATACCTTTA+AGG 0.163444 2:+81563144 None:intergenic
GAAAGTGATTACTGGATTAT+TGG 0.223957 2:-81562502 MsG0280011258.01.T01:CDS
CTCTTTAGAGGACTCCTTAA+AGG 0.227479 2:-81563158 MsG0280011258.01.T01:intron
GTGACCAAAAGTACCGTTTA+AGG 0.306457 2:-81565405 MsG0280011258.01.T01:five_prime_UTR
GACAAGATATCTACTTGATT+TGG 0.322323 2:-81561736 MsG0280011258.01.T01:CDS
GAGTAACGATTAACTTGTTT+TGG 0.325616 2:-81561552 MsG0280011258.01.T01:three_prime_UTR
GAAAGATTTGAAATGTTTAT+GGG 0.332265 2:-81561632 MsG0280011258.01.T01:three_prime_UTR
TGAACCTTAAACGGTACTTT+TGG 0.336630 2:+81565401 None:intergenic
GACTACAACTATAGTAATAA+AGG 0.343834 2:-81563281 MsG0280011258.01.T01:CDS
GAGGAAGAGAAAGTGATTAC+TGG 0.355323 2:-81562510 MsG0280011258.01.T01:CDS
CTCTACTCTCTTAGGACAAC+AGG 0.361485 2:+81564981 None:intergenic
TTCTGTAACTCTACTCTCTT+AGG 0.365893 2:+81564973 None:intergenic
TGAGAGTCTTTGTTTGTTGT+TGG 0.370100 2:+81565083 None:intergenic
TTACTATAGTTGTAGTCAAT+AGG 0.388726 2:+81563287 None:intergenic
AATAGGGAAGGAAAACTTTA+CGG 0.390843 2:-81561600 MsG0280011258.01.T01:three_prime_UTR
AGGAAAGAAAGCTTGAACTA+AGG 0.413057 2:-81565143 MsG0280011258.01.T01:CDS
AATAGACAATGAACCTTAAA+CGG 0.419132 2:+81565392 None:intergenic
GCTGTGGATGAGCTCTTTAG+AGG 0.423705 2:-81563170 MsG0280011258.01.T01:CDS
TGAGGGGTCTTATAACTTGT+TGG 0.439328 2:-81561503 MsG0280011258.01.T01:three_prime_UTR
GTCTGAGATTCTGGTTGTGA+TGG 0.455939 2:+81563350 None:intergenic
AACAAACAAAGACTCTCATT+TGG 0.459493 2:-81565078 MsG0280011258.01.T01:CDS
CACCTGGTGTTGATGAAGAC+TGG 0.477048 2:-81565113 MsG0280011258.01.T01:CDS
AGGAGAAAGAGTATCTTTAG+AGG 0.486306 2:-81565899 MsG0280011258.01.T01:five_prime_UTR
AACATGGATGGTGTTCCAAT+TGG 0.487413 2:-81563242 MsG0280011258.01.T01:CDS
ATGAGGATAATGAAGGAGAC+AGG 0.490984 2:-81562452 MsG0280011258.01.T01:CDS
AACAACAACGTTATAGTAGT+AGG 0.497411 2:+81565810 None:intergenic
TCTAAAGATACTCTTTCTCC+TGG 0.498426 2:+81565901 None:intergenic
ACTGGATTATTGGATGGAAG+TGG 0.500145 2:-81562492 MsG0280011258.01.T01:CDS
TACACTTATTTGAGGTAGCT+AGG 0.506349 2:+81565350 None:intergenic
AGTTAGCATACACTTATTTG+AGG 0.509704 2:+81565342 None:intergenic
AGTAGTAGGTTGTTTATCAC+AGG 0.518414 2:+81565824 None:intergenic
AATGAAGATGCTTACTGCCA+TGG 0.519355 2:+81562411 None:intergenic
GTGATTACTGGATTATTGGA+TGG 0.521970 2:-81562498 MsG0280011258.01.T01:CDS
TTCTCTTCAAATTCAAACAA+TGG 0.522441 2:-81565048 MsG0280011258.01.T01:CDS
GAACTAAGGCTTGGTCCACC+TGG 0.527306 2:-81565129 MsG0280011258.01.T01:CDS
CTTGTTACCACCACAAGTAG+AGG 0.528048 2:+81562539 None:intergenic
AACAACAACAATGTTGCTGC+TGG 0.531158 2:-81563317 MsG0280011258.01.T01:CDS
AGAGTATACTCTTGTATATG+AGG 0.532161 2:-81562469 MsG0280011258.01.T01:CDS
TTTCCAACACCTCTCAGAAA+AGG 0.535342 2:-81564924 MsG0280011258.01.T01:intron
GAAATGAAAGTGCTGTTAAG+TGG 0.537872 2:-81561709 MsG0280011258.01.T01:exon
CTTGTATATGAGGATAATGA+AGG 0.541105 2:-81562459 MsG0280011258.01.T01:CDS
AATTGTAACAAGGGAAAGGA+AGG 0.542633 2:-81565974 MsG0280011258.01.T01:five_prime_UTR
AGAAAGCTTGAACTAAGGCT+TGG 0.547085 2:-81565138 MsG0280011258.01.T01:CDS
ATGAAGATGCTTACTGCCAT+GGG 0.556758 2:+81562412 None:intergenic
GAAGGAGACAGGATGCTTGT+TGG 0.558754 2:-81562441 MsG0280011258.01.T01:CDS
TGAAAATCTTTCTTCAGCTG+TGG 0.566410 2:-81563186 MsG0280011258.01.T01:CDS
TGTGTACTCTTGATTTACTG+TGG 0.566567 2:-81561574 MsG0280011258.01.T01:three_prime_UTR
TGCTTGTTGGTGATGTCCCA+TGG 0.568099 2:-81562428 MsG0280011258.01.T01:CDS
ATGTGCCTGTAATTGTAACA+AGG 0.586900 2:-81565984 None:intergenic
CTGTAATTGTAACAAGGGAA+AGG 0.593229 2:-81565978 None:intergenic
TGTTTGTATCAACAGTGAAG+AGG 0.599382 2:-81561933 MsG0280011258.01.T01:CDS
ACATAGGAGCTATAAGACAT+AGG 0.600510 2:-81565942 MsG0280011258.01.T01:five_prime_UTR
CAACGAGATTCCTCTACTTG+TGG 0.602220 2:-81562549 MsG0280011258.01.T01:CDS
AGGAAGGGACACAGTCACAT+AGG 0.602333 2:-81565958 MsG0280011258.01.T01:five_prime_UTR
GCTGAAGAATACATAAAACA+AGG 0.604311 2:-81565236 MsG0280011258.01.T01:five_prime_UTR
AAGAGAGTAGAGTTACAGAA+TGG 0.608229 2:-81564970 MsG0280011258.01.T01:CDS
GACCTCATTTCTCACAGCAC+AGG 0.611289 2:-81565777 MsG0280011258.01.T01:intron
CGAGATTCCTCTACTTGTGG+TGG 0.613069 2:-81562546 MsG0280011258.01.T01:CDS
TTTGTTAAGATCAACATGGA+TGG 0.616572 2:-81563254 MsG0280011258.01.T01:CDS
TGGTGGTAACAAGAAAGAAG+AGG 0.622799 2:-81562529 MsG0280011258.01.T01:CDS
CTGAAGAATACATAAAACAA+GGG 0.624972 2:-81565235 MsG0280011258.01.T01:five_prime_UTR
AAATGAGAGAGAATCTTCTG+AGG 0.628593 2:-81565163 MsG0280011258.01.T01:CDS
TGTGCCTGTAATTGTAACAA+GGG 0.629371 2:-81565983 None:intergenic
AACCAGTCTTCATCAACACC+AGG 0.647259 2:+81565111 None:intergenic
AGAAAGAGTATCTTTAGAGG+AGG 0.650850 2:-81565896 MsG0280011258.01.T01:five_prime_UTR
ATTGTAACAAGGGAAAGGAA+GGG 0.662003 2:-81565973 MsG0280011258.01.T01:five_prime_UTR
TTTGTTTGTTAAGATCAACA+TGG 0.679515 2:-81563258 MsG0280011258.01.T01:CDS
CAGTCTTCATCAACACCAGG+TGG 0.694272 2:+81565114 None:intergenic
TACCTGTGCTGTGAGAAATG+AGG 0.694663 2:+81565775 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAAATAATAATTTTTG+AGG - Chr2:81563737-81563756 MsG0280011258.01.T01:intron 10.0%
!!! AACTAAATAATAATTTTTGA+GGG - Chr2:81563738-81563757 MsG0280011258.01.T01:intron 10.0%
!!! TAATATATGTACTTTAAAAA+TGG + Chr2:81564820-81564839 None:intergenic 10.0%
!!! TTATTTATTTTTTTTTCAGT+TGG - Chr2:81565665-81565684 MsG0280011258.01.T01:intron 10.0%
!! AAAACTTTAGATATAGAAAA+AGG + Chr2:81562543-81562562 None:intergenic 15.0%
!! AAATATAAAAAACTAAACCT+AGG + Chr2:81562178-81562197 None:intergenic 15.0%
!! AACATATATTAATACCTTTA+AGG + Chr2:81564293-81564312 None:intergenic 15.0%
!! AATAAAAATTCAAAGCAATA+TGG + Chr2:81564795-81564814 None:intergenic 15.0%
!! ACTATGATTGAATTTAAAAA+AGG + Chr2:81564322-81564341 None:intergenic 15.0%
!! ATATTTACAATATGTTAGTT+AGG + Chr2:81563790-81563809 None:intergenic 15.0%
!! CAAAAACTTAAAATAAAAAG+TGG - Chr2:81563697-81563716 MsG0280011258.01.T01:intron 15.0%
!! CATTTCGTATATATAATATA+TGG - Chr2:81564388-81564407 MsG0280011258.01.T01:intron 15.0%
!! CTATGATTGAATTTAAAAAA+GGG + Chr2:81564321-81564340 None:intergenic 15.0%
!! GAAAAAATATACTATAAAGA+AGG + Chr2:81562944-81562963 None:intergenic 15.0%
!! TAACATATTGTAAATATGTA+GGG - Chr2:81563793-81563812 MsG0280011258.01.T01:intron 15.0%
!! TATTGTTAGAAAACTATTAT+TGG - Chr2:81565420-81565439 MsG0280011258.01.T01:intron 15.0%
!!! AAACTTTAAAAAAAAGAGAT+AGG + Chr2:81562123-81562142 None:intergenic 15.0%
!!! AAATAAAAGTTTACTTTTAC+AGG + Chr2:81563440-81563459 None:intergenic 15.0%
!!! AATAAAAGTTTACTTTTACA+GGG + Chr2:81563439-81563458 None:intergenic 15.0%
!!! ATGTGTATGATTTTTTTTTT+TGG - Chr2:81565776-81565795 MsG0280011258.01.T01:intron 15.0%
!!! ATTTTTTTAATGTATGTGTT+TGG - Chr2:81565473-81565492 MsG0280011258.01.T01:intron 15.0%
!!! GTTATAATTCACATTTTAAA+GGG + Chr2:81563295-81563314 None:intergenic 15.0%
!!! TAATTAATAATGGAAAAACA+TGG + Chr2:81562722-81562741 None:intergenic 15.0%
!!! TATTAGTTTTAATTTTTCCT+TGG - Chr2:81563022-81563041 MsG0280011258.01.T01:intron 15.0%
!!! TTATAGTATATTTTTTCCTT+GGG - Chr2:81562947-81562966 MsG0280011258.01.T01:intron 15.0%
!!! TTATTTTTATTTTAAGACAG+AGG - Chr2:81562563-81562582 MsG0280011258.01.T01:intron 15.0%
!!! TTTATAGTATATTTTTTCCT+TGG - Chr2:81562946-81562965 MsG0280011258.01.T01:intron 15.0%
!! AAATTCAACATTAATGCTTA+AGG - Chr2:81564717-81564736 MsG0280011258.01.T01:intron 20.0%
!! AACACAATTGTATATTTGTA+AGG + Chr2:81563468-81563487 None:intergenic 20.0%
!! AAGTACAAAAAAGTTCAATT+GGG - Chr2:81564592-81564611 MsG0280011258.01.T01:intron 20.0%
!! AATAAAGATCTCATTAGAAT+TGG + Chr2:81563622-81563641 None:intergenic 20.0%
!! CTAAAAACAGAAAATAAGAA+CGG + Chr2:81561713-81561732 None:intergenic 20.0%
!! CTAACATATTGTAAATATGT+AGG - Chr2:81563792-81563811 MsG0280011258.01.T01:intron 20.0%
!! TAATTGTATTATTGCTAAGA+GGG + Chr2:81565349-81565368 None:intergenic 20.0%
!! TACAAATATACAATTGTGTT+TGG - Chr2:81563468-81563487 MsG0280011258.01.T01:intron 20.0%
!! TGATAGTAAAAAAACAACAA+AGG + Chr2:81561766-81561785 None:intergenic 20.0%
!! TGTACTTATATATACCATTT+GGG - Chr2:81563123-81563142 MsG0280011258.01.T01:intron 20.0%
!! TTAATTGTATTATTGCTAAG+AGG + Chr2:81565350-81565369 None:intergenic 20.0%
!! TTATAAAGCTCTTTAACTAT+TGG + Chr2:81564473-81564492 None:intergenic 20.0%
!! TTGTACTTATATATACCATT+TGG - Chr2:81563122-81563141 MsG0280011258.01.T01:intron 20.0%
!!! GAAAGATTTGAAATGTTTAT+GGG - Chr2:81565802-81565821 MsG0280011258.01.T01:five_prime_UTR 20.0%
!!! GCATTAGAATAAAATTTGTT+TGG + Chr2:81564756-81564775 None:intergenic 20.0%
!!! GGTTATAATTCACATTTTAA+AGG + Chr2:81563296-81563315 None:intergenic 20.0%
!!! GTTCTTATTTTCTGTTTTTA+GGG - Chr2:81561712-81561731 MsG0280011258.01.T01:exon 20.0%
!!! TATAGTATATTTTTTCCTTG+GGG - Chr2:81562948-81562967 MsG0280011258.01.T01:intron 20.0%
!!! TGAAAGATTTGAAATGTTTA+TGG - Chr2:81565801-81565820 MsG0280011258.01.T01:five_prime_UTR 20.0%
!!! TTATGGGTTTTGTATAAATA+GGG - Chr2:81565818-81565837 MsG0280011258.01.T01:five_prime_UTR 20.0%
!!! TTTATGGGTTTTGTATAAAT+AGG - Chr2:81565817-81565836 MsG0280011258.01.T01:five_prime_UTR 20.0%
! AAAGATGAGAGAGAATAAAT+AGG - Chr2:81561813-81561832 MsG0280011258.01.T01:intron 25.0%
! AACACTTGTCATAAATAATG+TGG + Chr2:81565256-81565275 None:intergenic 25.0%
! AATAGACAATGAACCTTAAA+CGG + Chr2:81562045-81562064 None:intergenic 25.0%
! AATAGTAATTATGAAGCACA+AGG + Chr2:81565207-81565226 None:intergenic 25.0%
! AATTGTATTATTGCTAAGAG+GGG + Chr2:81565348-81565367 None:intergenic 25.0%
! AGGCATGTAGTAATTAATAA+TGG + Chr2:81562732-81562751 None:intergenic 25.0%
! ATCATGCTTAACTTTGTAAA+TGG - Chr2:81563964-81563983 MsG0280011258.01.T01:intron 25.0%
! ATGTACTATAGCATAAGATT+AGG + Chr2:81565058-81565077 None:intergenic 25.0%
! CAAAAATAGTTACTAGTACA+TGG + Chr2:81562842-81562861 None:intergenic 25.0%
! CTCTCTCATCTTTATAATAA+AGG + Chr2:81561806-81561825 None:intergenic 25.0%
! CTGAAGAATACATAAAACAA+GGG - Chr2:81562199-81562218 MsG0280011258.01.T01:intron 25.0%
! GAAGTACAAAAAAGTTCAAT+TGG - Chr2:81564591-81564610 MsG0280011258.01.T01:intron 25.0%
! GACTACAACTATAGTAATAA+AGG - Chr2:81564153-81564172 MsG0280011258.01.T01:intron 25.0%
! GATCCCTCAATATAAAATAA+GGG + Chr2:81563570-81563589 None:intergenic 25.0%
! GGAAAATGAAACAAAAACAT+AGG + Chr2:81562157-81562176 None:intergenic 25.0%
! GTTAGAAAACTATTATTGGT+AGG - Chr2:81565424-81565443 MsG0280011258.01.T01:intron 25.0%
! TAAAAAGTGGTATATTTGCT+TGG - Chr2:81563710-81563729 MsG0280011258.01.T01:intron 25.0%
! TACATGCCTTATATAAACAT+TGG - Chr2:81562743-81562762 MsG0280011258.01.T01:intron 25.0%
! TGATCCCTCAATATAAAATA+AGG + Chr2:81563571-81563590 None:intergenic 25.0%
! TTACTATAGTTGTAGTCAAT+AGG + Chr2:81564150-81564169 None:intergenic 25.0%
! TTCTCTTCAAATTCAAACAA+TGG - Chr2:81562386-81562405 MsG0280011258.01.T01:intron 25.0%
! TTTGTGCCAATGTTTATATA+AGG + Chr2:81562752-81562771 None:intergenic 25.0%
!! ATTTTTGTCGAATAATCTAG+TGG + Chr2:81563317-81563336 None:intergenic 25.0%
!! CTCTGGTTATGAATTTTAAA+TGG + Chr2:81563363-81563382 None:intergenic 25.0%
!! TAAAATTCTTATAGAGTGTC+CGG + Chr2:81563165-81563184 None:intergenic 25.0%
!! TTTGTTTGTTAAGATCAACA+TGG - Chr2:81564176-81564195 MsG0280011258.01.T01:intron 25.0%
!!! AAGCCCTTATTTTATATTGA+GGG - Chr2:81563564-81563583 MsG0280011258.01.T01:intron 25.0%
!!! ACATTTTAAAGGGAATAAGT+GGG + Chr2:81563285-81563304 None:intergenic 25.0%
!!! CGTTCTTATTTTCTGTTTTT+AGG - Chr2:81561711-81561730 MsG0280011258.01.T01:exon 25.0%
!!! TAAGCCCTTATTTTATATTG+AGG - Chr2:81563563-81563582 MsG0280011258.01.T01:intron 25.0%
!!! TGTTTTTGTTTCATTTTCCT+AGG - Chr2:81562158-81562177 MsG0280011258.01.T01:intron 25.0%
!!! TTTCTTTCATTTTGAGAGAT+AGG - Chr2:81564617-81564636 MsG0280011258.01.T01:intron 25.0%
!!! TTTTTTTTTCAGTTGGTACT+AGG - Chr2:81565672-81565691 MsG0280011258.01.T01:intron 25.0%
AAAAAAACAACAAAGGAGAG+AGG + Chr2:81561759-81561778 None:intergenic 30.0%
AACAAACAAAGACTCTCATT+TGG - Chr2:81562356-81562375 MsG0280011258.01.T01:intron 30.0%
AACAACAACGTTATAGTAGT+AGG + Chr2:81561627-81561646 None:intergenic 30.0%
AATAGGGAAGGAAAACTTTA+CGG - Chr2:81565834-81565853 MsG0280011258.01.T01:five_prime_UTR 30.0%
AGAGTATACTCTTGTATATG+AGG - Chr2:81564965-81564984 MsG0280011258.01.T01:CDS 30.0%
AGTTAGCATACACTTATTTG+AGG + Chr2:81562095-81562114 None:intergenic 30.0%
ATTAAATCACACTAGTTAGC+AGG + Chr2:81565400-81565419 None:intergenic 30.0%
ATTCAATCATAGTACTCATG+TGG - Chr2:81564329-81564348 MsG0280011258.01.T01:intron 30.0%
ATTTGAAGGGTTATGCTAAT+AGG - Chr2:81563851-81563870 MsG0280011258.01.T01:intron 30.0%
CAACCACACACAAAATATAT+TGG - Chr2:81562786-81562805 MsG0280011258.01.T01:intron 30.0%
CTTGTATATGAGGATAATGA+AGG - Chr2:81564975-81564994 MsG0280011258.01.T01:CDS 30.0%
GAAAGTGATTACTGGATTAT+TGG - Chr2:81564932-81564951 MsG0280011258.01.T01:CDS 30.0%
GACAAATTCAGATATTCACA+TGG + Chr2:81562990-81563009 None:intergenic 30.0%
GACAAGATATCTACTTGATT+TGG - Chr2:81565698-81565717 MsG0280011258.01.T01:intron 30.0%
GCTGAAGAATACATAAAACA+AGG - Chr2:81562198-81562217 MsG0280011258.01.T01:intron 30.0%
GGCACATAATAAATAACAGA+TGG + Chr2:81562923-81562942 None:intergenic 30.0%
GTAGCAAAAACTCAAGATAT+GGG + Chr2:81563409-81563428 None:intergenic 30.0%
TAAACAGTGAAACTTGTAGT+AGG + Chr2:81563942-81563961 None:intergenic 30.0%
TGTAGGGTTACTATTTGATT+TGG - Chr2:81563809-81563828 MsG0280011258.01.T01:intron 30.0%
TTTGTTAAGATCAACATGGA+TGG - Chr2:81564180-81564199 MsG0280011258.01.T01:intron 30.0%
! AAAACCATGCTTTTACTAGT+AGG + Chr2:81564649-81564668 None:intergenic 30.0%
! AAACCATGCTTTTACTAGTA+GGG + Chr2:81564648-81564667 None:intergenic 30.0%
! AGATCAACTTTTCTACCAAT+TGG + Chr2:81564210-81564229 None:intergenic 30.0%
! ATATATTTTGTGTGTGGTTG+AGG + Chr2:81562786-81562805 None:intergenic 30.0%
! TTGCCAATATATTTTGTGTG+TGG + Chr2:81562792-81562811 None:intergenic 30.0%
!! ATTTGATTTGGATGAGTGAT+TGG - Chr2:81563821-81563840 MsG0280011258.01.T01:intron 30.0%
!! CACATTTTAAAGGGAATAAG+TGG + Chr2:81563286-81563305 None:intergenic 30.0%
!! TGAAGTCATTTTGTAGATGA+GGG - Chr2:81565914-81565933 MsG0280011258.01.T01:five_prime_UTR 30.0%
!! TTGAAGTCATTTTGTAGATG+AGG - Chr2:81565913-81565932 MsG0280011258.01.T01:five_prime_UTR 30.0%
!! TTTACTTTTACAGGGACTAA+AGG + Chr2:81563431-81563450 None:intergenic 30.0%
!!! ATACCCATTTTTTAATGACG+AGG + Chr2:81563050-81563069 None:intergenic 30.0%
!!! GAGTAACGATTAACTTGTTT+TGG - Chr2:81565882-81565901 MsG0280011258.01.T01:five_prime_UTR 30.0%
!!! TACCCATTTTTTAATGACGA+GGG + Chr2:81563049-81563068 None:intergenic 30.0%
!!! TGTTTTTTCTCCTACTATTG+TGG - Chr2:81562608-81562627 MsG0280011258.01.T01:intron 30.0%
AAATGAGAGAGAATCTTCTG+AGG - Chr2:81562271-81562290 MsG0280011258.01.T01:intron 35.0%
AAGAGAGTAGAGTTACAGAA+TGG - Chr2:81562464-81562483 MsG0280011258.01.T01:CDS 35.0%
ACATAGGAGCTATAAGACAT+AGG - Chr2:81561492-81561511 MsG0280011258.01.T01:three_prime_UTR 35.0%
AGACATCTCTGAATCAAACA+TGG + Chr2:81562884-81562903 None:intergenic 35.0%
AGGAAAGAAAGCTTGAACTA+AGG - Chr2:81562291-81562310 MsG0280011258.01.T01:intron 35.0%
AGTAGTAGGTTGTTTATCAC+AGG + Chr2:81561613-81561632 None:intergenic 35.0%
ATTGTAACAAGGGAAAGGAA+GGG - Chr2:81561461-81561480 MsG0280011258.01.T01:three_prime_UTR 35.0%
GGTAGCAAAAACTCAAGATA+TGG + Chr2:81563410-81563429 None:intergenic 35.0%
GTCCCTCGTCATTAAAAAAT+GGG - Chr2:81563044-81563063 MsG0280011258.01.T01:intron 35.0%
GTGATTACTGGATTATTGGA+TGG - Chr2:81564936-81564955 MsG0280011258.01.T01:CDS 35.0%
TAAAAACATTGACCACACGA+CGG + Chr2:81564356-81564375 None:intergenic 35.0%
TATAGTGTGTGTAAAAAGCC+AGG - Chr2:81561515-81561534 MsG0280011258.01.T01:three_prime_UTR 35.0%
TCTAAAGATACTCTTTCTCC+TGG + Chr2:81561536-81561555 None:intergenic 35.0%
TGAAAATCTTTCTTCAGCTG+TGG - Chr2:81564248-81564267 MsG0280011258.01.T01:intron 35.0%
TGTGTACTCTTGATTTACTG+TGG - Chr2:81565860-81565879 MsG0280011258.01.T01:five_prime_UTR 35.0%
TGTTTGTATCAACAGTGAAG+AGG - Chr2:81565501-81565520 MsG0280011258.01.T01:intron 35.0%
TTCATCAACGTGTTTCGATA+CGG - Chr2:81564435-81564454 MsG0280011258.01.T01:intron 35.0%
TTCTGTAACTCTACTCTCTT+AGG + Chr2:81562464-81562483 None:intergenic 35.0%
TTCTTCCTGAATGAACGAAT+TGG + Chr2:81564039-81564058 None:intergenic 35.0%
TTGGATGAGTGATTGGATTT+GGG - Chr2:81563828-81563847 MsG0280011258.01.T01:intron 35.0%
TTTGGATGAGTGATTGGATT+TGG - Chr2:81563827-81563846 MsG0280011258.01.T01:intron 35.0%
! AATGGTTTTCAACATGTGAG+AGG - Chr2:81562404-81562423 MsG0280011258.01.T01:intron 35.0%
! CTTTTTCTTTCTTTCTCCAG+TGG - Chr2:81562004-81562023 MsG0280011258.01.T01:intron 35.0%
! GATTGGATTTGGGATTTGAA+GGG - Chr2:81563838-81563857 MsG0280011258.01.T01:intron 35.0%
! TACACTTATTTGAGGTAGCT+AGG + Chr2:81562087-81562106 None:intergenic 35.0%
! TGAACCTTAAACGGTACTTT+TGG + Chr2:81562036-81562055 None:intergenic 35.0%
! TGATTGGATTTGGGATTTGA+AGG - Chr2:81563837-81563856 MsG0280011258.01.T01:intron 35.0%
!! AGAAAGAGTATCTTTAGAGG+AGG - Chr2:81561538-81561557 MsG0280011258.01.T01:three_prime_UTR 35.0%
!! AGGAGAAAGAGTATCTTTAG+AGG - Chr2:81561535-81561554 MsG0280011258.01.T01:three_prime_UTR 35.0%
!! CTTTCATTTTGAGAGATAGG+TGG - Chr2:81564620-81564639 MsG0280011258.01.T01:intron 35.0%
!! GAAATGAAAGTGCTGTTAAG+TGG - Chr2:81565725-81565744 MsG0280011258.01.T01:intron 35.0%
!! GAAGTCATTTTGTAGATGAG+GGG - Chr2:81565915-81565934 MsG0280011258.01.T01:five_prime_UTR 35.0%
!! GGGTTTTGTATAAATAGGGA+AGG - Chr2:81565822-81565841 MsG0280011258.01.T01:five_prime_UTR 35.0%
!! TGAGAGTCTTTGTTTGTTGT+TGG + Chr2:81562354-81562373 None:intergenic 35.0%
!! TTTTTAGGGACTTGAGTTGT+TGG - Chr2:81561726-81561745 MsG0280011258.01.T01:CDS 35.0%
!!! AGCAGTTCTGTTTTTTTGGT+GGG + Chr2:81563992-81564011 None:intergenic 35.0%
!!! GTATATTTTTTCCTTGGGGT+TGG - Chr2:81562952-81562971 MsG0280011258.01.T01:intron 35.0%
AAATCACACTAGTTAGCAGG+AGG + Chr2:81565397-81565416 None:intergenic 40.0%
AAATTCATAACCAGAGCTCG+AGG - Chr2:81563367-81563386 MsG0280011258.01.T01:CDS 40.0%
AACAACAACAATGTTGCTGC+TGG - Chr2:81564117-81564136 MsG0280011258.01.T01:intron 40.0%
AACATGGATGGTGTTCCAAT+TGG - Chr2:81564192-81564211 MsG0280011258.01.T01:intron 40.0%
AAGGGAATAAGTGGGTGATT+AGG + Chr2:81563277-81563296 None:intergenic 40.0%
AATGAAGATGCTTACTGCCA+TGG + Chr2:81565026-81565045 None:intergenic 40.0%
AATTCATAACCAGAGCTCGA+GGG - Chr2:81563368-81563387 MsG0280011258.01.T01:CDS 40.0%
ACTGGATTATTGGATGGAAG+TGG - Chr2:81564942-81564961 MsG0280011258.01.T01:CDS 40.0%
AGAAACCCTACAAAGGTAGA+GGG + Chr2:81561918-81561937 None:intergenic 40.0%
AGAAAGCTTGAACTAAGGCT+TGG - Chr2:81562296-81562315 MsG0280011258.01.T01:intron 40.0%
AGAAGAGAGAAACCCTACAA+AGG + Chr2:81561925-81561944 None:intergenic 40.0%
AGAGGGAGTGATAATAGCAA+TGG + Chr2:81561901-81561920 None:intergenic 40.0%
AGGGAATAAGTGGGTGATTA+GGG + Chr2:81563276-81563295 None:intergenic 40.0%
ATGAAGATGCTTACTGCCAT+GGG + Chr2:81565025-81565044 None:intergenic 40.0%
ATGAGGATAATGAAGGAGAC+AGG - Chr2:81564982-81565001 MsG0280011258.01.T01:CDS 40.0%
ATTTGCACGCTTAGAGTTAG+AGG + Chr2:81561841-81561860 None:intergenic 40.0%
CAAAAAAACAGAACTGCTCC+TGG - Chr2:81563994-81564013 MsG0280011258.01.T01:intron 40.0%
GAAACAGAACAGAACTTGCA+TGG + Chr2:81562635-81562654 None:intergenic 40.0%
GAATCAAACATGGCTAGGAA+AGG + Chr2:81562874-81562893 None:intergenic 40.0%
GAGGAAGAGAAAGTGATTAC+TGG - Chr2:81564924-81564943 MsG0280011258.01.T01:intron 40.0%
GGTCCCTCGTCATTAAAAAA+TGG - Chr2:81563043-81563062 MsG0280011258.01.T01:intron 40.0%
GTACCCTACTAGTAAAAGCA+TGG - Chr2:81564642-81564661 MsG0280011258.01.T01:intron 40.0%
GTTTCGATACGGCTAGTATT+TGG - Chr2:81564446-81564465 MsG0280011258.01.T01:intron 40.0%
TCTCTGAATCAAACATGGCT+AGG + Chr2:81562879-81562898 None:intergenic 40.0%
TGGTGGTAACAAGAAAGAAG+AGG - Chr2:81564905-81564924 MsG0280011258.01.T01:intron 40.0%
TTCCTGAATGAACGAATTGG+TGG + Chr2:81564036-81564055 None:intergenic 40.0%
TTCTCACAGCACAGGTAATT+TGG - Chr2:81561665-81561684 MsG0280011258.01.T01:three_prime_UTR 40.0%
TTTCCAACACCTCTCAGAAA+AGG - Chr2:81562510-81562529 MsG0280011258.01.T01:CDS 40.0%
TTTGCACGCTTAGAGTTAGA+GGG + Chr2:81561840-81561859 None:intergenic 40.0%
! ATACCATTTGGGTATTGCTC+AGG - Chr2:81563134-81563153 MsG0280011258.01.T01:intron 40.0%
! CTCTTTAGAGGACTCCTTAA+AGG - Chr2:81564276-81564295 MsG0280011258.01.T01:intron 40.0%
! GGTATAGTACCTTTTCTGAG+AGG + Chr2:81562522-81562541 None:intergenic 40.0%
! TGAGGGGTCTTATAACTTGT+TGG - Chr2:81565931-81565950 MsG0280011258.01.T01:five_prime_UTR 40.0%
! TTTTTAATGACGAGGGACCA+AGG + Chr2:81563042-81563061 None:intergenic 40.0%
!! GTGACCAAAAGTACCGTTTA+AGG - Chr2:81562029-81562048 MsG0280011258.01.T01:intron 40.0%
!! TAGGGTTAGTTATGATCACG+AGG + Chr2:81563258-81563277 None:intergenic 40.0%
!!! CAGGAGCAGTTCTGTTTTTT+TGG + Chr2:81563996-81564015 None:intergenic 40.0%
!!! GAGCAGTTCTGTTTTTTTGG+TGG + Chr2:81563993-81564012 None:intergenic 40.0%
!!! GCAGTTCTGTTTTTTTGGTG+GGG + Chr2:81563991-81564010 None:intergenic 40.0%
AACCAGTCTTCATCAACACC+AGG + Chr2:81562326-81562345 None:intergenic 45.0%
ACCAGCTGTATGCTTCAGAT+TGG - Chr2:81564686-81564705 MsG0280011258.01.T01:intron 45.0%
ACTCCTGAGCAATACCCAAA+TGG + Chr2:81563140-81563159 None:intergenic 45.0%
AGTATGTCAAACCAACCCCA+AGG + Chr2:81562966-81562985 None:intergenic 45.0%
ATCACTCCCTCTACCTTTGT+AGG - Chr2:81561909-81561928 MsG0280011258.01.T01:CDS 45.0%
ATCTGTAGCACTACATGCCA+TGG - Chr2:81565284-81565303 MsG0280011258.01.T01:intron 45.0%
CAAAATGCCACATCGAGTGA+TGG + Chr2:81565149-81565168 None:intergenic 45.0%
CAACGAGATTCCTCTACTTG+TGG - Chr2:81564885-81564904 MsG0280011258.01.T01:intron 45.0%
CTCTACTCTCTTAGGACAAC+AGG + Chr2:81562456-81562475 None:intergenic 45.0%
CTTGCATGGACCACAATAGT+AGG + Chr2:81562621-81562640 None:intergenic 45.0%
CTTGTTACCACCACAAGTAG+AGG + Chr2:81564898-81564917 None:intergenic 45.0%
GAGAAACCCTACAAAGGTAG+AGG + Chr2:81561919-81561938 None:intergenic 45.0%
TACCTGTGCTGTGAGAAATG+AGG + Chr2:81561662-81561681 None:intergenic 45.0%
TCACTCCCTCTACCTTTGTA+GGG - Chr2:81561910-81561929 MsG0280011258.01.T01:CDS 45.0%
TCCAATTCCATCACTCGATG+TGG - Chr2:81565139-81565158 MsG0280011258.01.T01:CDS 45.0%
TGTGACAAACAGACATGCCA+TGG + Chr2:81565304-81565323 None:intergenic 45.0%
TTATTGCTAAGAGGGGACAG+TGG + Chr2:81565341-81565360 None:intergenic 45.0%
! ACCAATCTGAAGCATACAGC+TGG + Chr2:81564690-81564709 None:intergenic 45.0%
! AGGGACTTGAGTTGTTGGTT+TGG - Chr2:81561731-81561750 MsG0280011258.01.T01:CDS 45.0%
! GTCTGAGATTCTGGTTGTGA+TGG + Chr2:81564087-81564106 None:intergenic 45.0%
! TGCTGTTGAGTCTGAGATTC+TGG + Chr2:81564096-81564115 None:intergenic 45.0%
!! CTGCTTTTACACGTGAGTCA+TGG - Chr2:81565552-81565571 MsG0280011258.01.T01:intron 45.0%
!! GTACCTTTTCTGAGAGGTGT+TGG + Chr2:81562516-81562535 None:intergenic 45.0%
!! TGTTAATATTATTTAATTAA+AGG - Chr2:81565227-81565246 MsG0280011258.01.T01:five_prime_UTR 5.0%
!!! TTGTTTTTTAATAAATTTTT+TGG - Chr2:81563085-81563104 MsG0280011258.01.T01:intron 5.0%
AGGAAGGGACACAGTCACAT+AGG - Chr2:81561476-81561495 MsG0280011258.01.T01:three_prime_UTR 50.0%
CAGTCTTCATCAACACCAGG+TGG + Chr2:81562323-81562342 None:intergenic 50.0%
CGAGATTCCTCTACTTGTGG+TGG - Chr2:81564888-81564907 MsG0280011258.01.T01:intron 50.0%
GAAGGAGACAGGATGCTTGT+TGG - Chr2:81564993-81565012 MsG0280011258.01.T01:CDS 50.0%
GACCTCATTTCTCACAGCAC+AGG - Chr2:81561657-81561676 MsG0280011258.01.T01:three_prime_UTR 50.0%
GCTGTGGATGAGCTCTTTAG+AGG - Chr2:81564264-81564283 MsG0280011258.01.T01:intron 50.0%
GGCCACCAATTCGTTCATTC+AGG - Chr2:81564031-81564050 MsG0280011258.01.T01:intron 50.0%
! GCCACATCGAGTGATGGAAT+TGG + Chr2:81565143-81565162 None:intergenic 50.0%
! GTACTTTTGGTCACTGCCAC+TGG + Chr2:81562023-81562042 None:intergenic 50.0%
!! CACCTGGTGTTGATGAAGAC+TGG - Chr2:81562321-81562340 MsG0280011258.01.T01:intron 50.0%
!! GGGTATTGCTCAGGAGTATC+CGG - Chr2:81563143-81563162 MsG0280011258.01.T01:intron 50.0%
!! TGCTTGTTGGTGATGTCCCA+TGG - Chr2:81565006-81565025 MsG0280011258.01.T01:CDS 50.0%
AACTGCTCCTGGACCAGTAG+TGG - Chr2:81564005-81564024 MsG0280011258.01.T01:intron 55.0%
ACTGCTCCTGGACCAGTAGT+GGG - Chr2:81564006-81564025 MsG0280011258.01.T01:intron 55.0%
TAATTACCGCCCTCGAGCTC+TGG + Chr2:81563380-81563399 None:intergenic 55.0%
TACTCATGTGGACCGTCGTG+TGG - Chr2:81564341-81564360 MsG0280011258.01.T01:intron 55.0%
TCATAACCAGAGCTCGAGGG+CGG - Chr2:81563371-81563390 MsG0280011258.01.T01:CDS 55.0%
! ATTGGTGGCCAACCCACTAC+TGG + Chr2:81564021-81564040 None:intergenic 55.0%
! GAACTAAGGCTTGGTCCACC+TGG - Chr2:81562305-81562324 MsG0280011258.01.T01:intron 55.0%
!! CTCCTGGACCAGTAGTGGGT+TGG - Chr2:81564010-81564029 MsG0280011258.01.T01:intron 60.0%
GGCCAACCCACTACTGGTCC+AGG + Chr2:81564015-81564034 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81561461 81565995 81561461 ID=MsG0280011258.01;Name=MsG0280011258.01
Chr2 mRNA 81561461 81565995 81561461 ID=MsG0280011258.01.T01;Parent=MsG0280011258.01;Name=MsG0280011258.01.T01;_AED=0.35;_eAED=0.36;_QI=372|0.66|0.71|1|0.66|0.57|7|264|268
Chr2 exon 81561461 81561772 81561461 ID=MsG0280011258.01.T01:exon:12100;Parent=MsG0280011258.01.T01
Chr2 exon 81561870 81561957 81561870 ID=MsG0280011258.01.T01:exon:12099;Parent=MsG0280011258.01.T01
Chr2 exon 81562426 81562573 81562426 ID=MsG0280011258.01.T01:exon:12098;Parent=MsG0280011258.01.T01
Chr2 exon 81563159 81563403 81563159 ID=MsG0280011258.01.T01:exon:12097;Parent=MsG0280011258.01.T01
Chr2 exon 81564925 81565276 81564925 ID=MsG0280011258.01.T01:exon:12096;Parent=MsG0280011258.01.T01
Chr2 exon 81565353 81565432 81565353 ID=MsG0280011258.01.T01:exon:12095;Parent=MsG0280011258.01.T01
Chr2 exon 81565778 81565995 81565778 ID=MsG0280011258.01.T01:exon:12094;Parent=MsG0280011258.01.T01
Chr2 five_prime_UTR 81565778 81565995 81565778 ID=MsG0280011258.01.T01:five_prime_utr;Parent=MsG0280011258.01.T01
Chr2 five_prime_UTR 81565353 81565432 81565353 ID=MsG0280011258.01.T01:five_prime_utr;Parent=MsG0280011258.01.T01
Chr2 five_prime_UTR 81565203 81565276 81565203 ID=MsG0280011258.01.T01:five_prime_utr;Parent=MsG0280011258.01.T01
Chr2 CDS 81564925 81565202 81564925 ID=MsG0280011258.01.T01:cds;Parent=MsG0280011258.01.T01
Chr2 CDS 81563159 81563403 81563159 ID=MsG0280011258.01.T01:cds;Parent=MsG0280011258.01.T01
Chr2 CDS 81562426 81562573 81562426 ID=MsG0280011258.01.T01:cds;Parent=MsG0280011258.01.T01
Chr2 CDS 81561870 81561957 81561870 ID=MsG0280011258.01.T01:cds;Parent=MsG0280011258.01.T01
Chr2 CDS 81561725 81561772 81561725 ID=MsG0280011258.01.T01:cds;Parent=MsG0280011258.01.T01
Chr2 three_prime_UTR 81561461 81561724 81561461 ID=MsG0280011258.01.T01:three_prime_utr;Parent=MsG0280011258.01.T01
Gene Sequence

>MsG0280011258.01.T01

ATGAATGAGATGTCAAGAAATGAGAGAGAATCTTCTGAGGAAAGAAAGCTTGAACTAAGGCTTGGTCCACCTGGTGTTGATGAAGACTGGTTTCACACCAACAACAAACAAAGACTCTCATTTGGTAACTACTTCTCTTCAAATTCAAACAATGGTTTTCAACATGTGAGAGGTAACAAAGAATCTTCATCATCACAAACCTGTTGTCCTAAGAGAGTAGAGTTACAGAATGGTGATAATAACAAAGTAACAGCTGTTTCCAACACCTCTCAGAAAAGGAAGAATCTTGCAACTAGCAGCAGTTCTAAGCCATCACAACCAGAATCTCAGACTCAACAGCACAACAACAACAATGTTGCTGCTGGTAAAAAACCTATTGACTACAACTATAGTAATAAAGGTTTGTTTGTTAAGATCAACATGGATGGTGTTCCAATTGGTAGAAAAGTTGATCTCAATGCTTATCATAGCTATGAAAATCTTTCTTCAGCTGTGGATGAGCTCTTTAGAGGACTCCTTAAAGCTCAACGAGATTCCTCTACTTGTGGTGGTAACAAGAAAGAAGAGGAAGAGAAAGTGATTACTGGATTATTGGATGGAAGTGGAGAGTATACTCTTGTATATGAGGATAATGAAGGAGACAGGATGCTTGTTGGTGATGTCCCATGGCACATGTTTGTATCAACAGTGAAGAGGCTTCGAGTGTTGAAGAGTACAGAGCTTTCTGCTTTTACACGTGAGTCATGGAATCTTATAGTATTGGTACTAGGCAAGACAAGATATCTACTTGATTTGGCAATGAAATGA

Protein sequence

>MsG0280011258.01.T01

MNEMSRNERESSEERKLELRLGPPGVDEDWFHTNNKQRLSFGNYFSSNSNNGFQHVRGNKESSSSQTCCPKRVELQNGDNNKVTAVSNTSQKRKNLATSSSSKPSQPESQTQQHNNNNVAAGKKPIDYNYSNKGLFVKINMDGVPIGRKVDLNAYHSYENLSSAVDELFRGLLKAQRDSSTCGGNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTRESWNLIVLVLGKTRYLLDLAMK*