Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045295.01.T01 | KAF1871915.1 | 77.451 | 306 | 68 | 1 | 2 | 306 | 88 | 393 | 0 | 520 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045295.01.T01 | A0A072TRY4 | 81.717 | 361 | 11 | 2 | 1 | 306 | 51 | 411 | 0.0 | 598 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000983.01 | MsG0880045295.01 | 0.816803 | 4.579591e-52 | 3.277575e-49 |
MsG0880045295.01 | MsG0880047226.01 | 0.829081 | 6.284873e-55 | 6.364919e-52 |
MsG0880045295.01 | MsG0880047666.01 | 0.822487 | 2.308014e-53 | 1.934517e-50 |
MsG0180003858.01 | MsG0880045295.01 | 0.805748 | 1.149075e-49 | 6.128293e-47 |
MsG0780041063.01 | MsG0880045295.01 | 0.815042 | 1.131852e-51 | 7.719517e-49 |
MsG0880042961.01 | MsG0880045295.01 | 0.806380 | 8.460059e-50 | 4.585057e-47 |
MsG0280010779.01 | MsG0880045295.01 | 0.800785 | 1.224720e-48 | 5.752778e-46 |
MsG0280010795.01 | MsG0880045295.01 | 0.816128 | 6.487246e-52 | 4.557903e-49 |
MsG0280011282.01 | MsG0880045295.01 | 0.800716 | 1.264955e-48 | 5.931415e-46 |
MsG0680034598.01 | MsG0880045295.01 | 0.804744 | 1.865249e-49 | 9.694218e-47 |
MsG0480022325.01 | MsG0880045295.01 | 0.800017 | 1.755714e-48 | 8.088025e-46 |
MsG0580024109.01 | MsG0880045295.01 | 0.813754 | 2.180890e-51 | 1.436454e-48 |
MsG0580024489.01 | MsG0880045295.01 | 0.806354 | 8.569788e-50 | 4.641366e-47 |
MsG0580024758.01 | MsG0880045295.01 | 0.807634 | 4.592418e-50 | 2.570945e-47 |
MsG0580025766.01 | MsG0880045295.01 | 0.824848 | 6.460960e-54 | 5.791204e-51 |
MsG0380015548.01 | MsG0880045295.01 | 0.831049 | 2.080588e-55 | 2.231860e-52 |
MsG0380015816.01 | MsG0880045295.01 | 0.800140 | 1.657162e-48 | 7.658130e-46 |
MsG0380016703.01 | MsG0880045295.01 | 0.838273 | 3.171947e-57 | 4.226624e-54 |
MsG0380016994.01 | MsG0880045295.01 | 0.811605 | 6.440165e-51 | 4.003897e-48 |
MsG0380017159.01 | MsG0880045295.01 | 0.833577 | 4.923910e-56 | 5.693987e-53 |
MsG0580029298.01 | MsG0880045295.01 | 0.806669 | 7.354241e-50 | 4.015039e-47 |
MsG0280007359.01 | MsG0880045295.01 | 0.811288 | 7.545695e-51 | 4.652216e-48 |
MsG0780036752.01 | MsG0880045295.01 | 0.808997 | 2.352746e-50 | 1.365125e-47 |
MsG0780039425.01 | MsG0880045295.01 | 0.801289 | 9.657172e-49 | 4.594736e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045295.01.T01 | MTR_8g069575 | 81.717 | 361 | 11 | 2 | 1 | 306 | 51 | 411 | 0.0 | 598 |
MsG0880045295.01.T01 | MTR_5g033650 | 63.056 | 360 | 76 | 3 | 3 | 306 | 8 | 366 | 1.04e-163 | 460 |
MsG0880045295.01.T01 | MTR_3g077430 | 61.219 | 361 | 83 | 4 | 2 | 306 | 106 | 465 | 2.88e-159 | 452 |
MsG0880045295.01.T01 | MTR_4g105400 | 59.599 | 349 | 83 | 4 | 15 | 306 | 11 | 358 | 6.31e-148 | 420 |
MsG0880045295.01.T01 | MTR_8g069610 | 59.331 | 359 | 91 | 2 | 3 | 306 | 56 | 414 | 2.50e-147 | 420 |
MsG0880045295.01.T01 | MTR_3g095890 | 55.932 | 354 | 99 | 4 | 3 | 305 | 86 | 433 | 3.52e-133 | 385 |
MsG0880045295.01.T01 | MTR_8g069580 | 56.560 | 343 | 107 | 5 | 3 | 306 | 55 | 394 | 9.36e-131 | 377 |
MsG0880045295.01.T01 | MTR_8g069720 | 50.843 | 356 | 122 | 3 | 3 | 306 | 53 | 407 | 1.47e-127 | 370 |
MsG0880045295.01.T01 | MTR_8g069715 | 50.696 | 359 | 122 | 4 | 2 | 306 | 53 | 410 | 3.02e-123 | 359 |
MsG0880045295.01.T01 | MTR_8g069660 | 51.429 | 350 | 119 | 5 | 3 | 306 | 56 | 400 | 8.96e-122 | 355 |
MsG0880045295.01.T01 | MTR_8g069640 | 50.716 | 349 | 126 | 3 | 3 | 305 | 56 | 404 | 6.09e-121 | 353 |
MsG0880045295.01.T01 | MTR_7g116420 | 46.214 | 383 | 127 | 4 | 2 | 305 | 57 | 439 | 5.82e-120 | 352 |
MsG0880045295.01.T01 | MTR_1g079730 | 44.784 | 393 | 129 | 5 | 2 | 306 | 59 | 451 | 4.37e-118 | 347 |
MsG0880045295.01.T01 | MTR_8g069590 | 52.288 | 306 | 90 | 4 | 56 | 306 | 1 | 305 | 2.77e-106 | 312 |
MsG0880045295.01.T01 | MTR_8g069600 | 68.912 | 193 | 60 | 0 | 114 | 306 | 201 | 393 | 9.28e-94 | 283 |
MsG0880045295.01.T01 | MTR_8g069600 | 63.964 | 111 | 40 | 0 | 3 | 113 | 30 | 140 | 5.15e-46 | 160 |
MsG0880045295.01.T01 | MTR_8g088510 | 59.716 | 211 | 79 | 2 | 96 | 305 | 210 | 415 | 9.06e-92 | 279 |
MsG0880045295.01.T01 | MTR_8g088510 | 50.000 | 114 | 41 | 3 | 2 | 103 | 40 | 149 | 1.77e-24 | 102 |
MsG0880045295.01.T01 | MTR_2g062610 | 56.872 | 211 | 86 | 1 | 96 | 306 | 131 | 336 | 2.70e-90 | 272 |
MsG0880045295.01.T01 | MTR_2g062610 | 56.872 | 211 | 86 | 1 | 96 | 306 | 138 | 343 | 3.15e-90 | 272 |
MsG0880045295.01.T01 | MTR_2g062610 | 56.872 | 211 | 86 | 1 | 96 | 306 | 221 | 426 | 2.29e-89 | 273 |
MsG0880045295.01.T01 | MTR_2g093840 | 46.407 | 334 | 113 | 8 | 29 | 306 | 37 | 360 | 1.96e-84 | 258 |
MsG0880045295.01.T01 | MTR_2g073040 | 54.978 | 231 | 52 | 2 | 3 | 181 | 39 | 269 | 6.03e-82 | 249 |
MsG0880045295.01.T01 | MTR_2g073020 | 51.948 | 231 | 59 | 2 | 3 | 181 | 52 | 282 | 1.02e-74 | 231 |
MsG0880045295.01.T01 | MTR_8g069695 | 50.000 | 202 | 99 | 2 | 107 | 306 | 58 | 259 | 6.88e-69 | 215 |
MsG0880045295.01.T01 | MTR_3g104030 | 34.048 | 373 | 171 | 10 | 3 | 302 | 40 | 410 | 3.72e-60 | 197 |
MsG0880045295.01.T01 | MTR_8g069630 | 63.846 | 130 | 45 | 2 | 178 | 306 | 1 | 129 | 1.76e-54 | 174 |
MsG0880045295.01.T01 | MTR_6g012620 | 44.828 | 203 | 96 | 5 | 112 | 306 | 216 | 410 | 1.22e-51 | 175 |
MsG0880045295.01.T01 | MTR_6g012620 | 46.154 | 104 | 49 | 3 | 3 | 100 | 31 | 133 | 2.59e-21 | 93.6 |
MsG0880045295.01.T01 | MTR_8g069750 | 61.607 | 112 | 43 | 0 | 114 | 225 | 151 | 262 | 2.02e-46 | 158 |
MsG0880045295.01.T01 | MTR_5g078580 | 31.737 | 334 | 171 | 8 | 2 | 283 | 39 | 367 | 1.48e-44 | 156 |
MsG0880045295.01.T01 | MTR_1g016910 | 40.306 | 196 | 115 | 2 | 112 | 306 | 226 | 420 | 5.65e-44 | 155 |
MsG0880045295.01.T01 | MTR_1g016910 | 39.024 | 123 | 54 | 2 | 3 | 105 | 37 | 158 | 4.86e-12 | 66.6 |
MsG0880045295.01.T01 | MTR_3g103980 | 38.725 | 204 | 121 | 3 | 106 | 306 | 233 | 435 | 1.59e-42 | 152 |
MsG0880045295.01.T01 | MTR_3g103980 | 44.248 | 113 | 56 | 3 | 3 | 109 | 56 | 167 | 5.70e-22 | 95.9 |
MsG0880045295.01.T01 | MTR_3g104000 | 39.086 | 197 | 118 | 2 | 106 | 301 | 216 | 411 | 2.98e-42 | 150 |
MsG0880045295.01.T01 | MTR_3g104000 | 44.643 | 112 | 55 | 2 | 3 | 108 | 35 | 145 | 4.33e-22 | 95.9 |
MsG0880045295.01.T01 | MTR_3g104070 | 39.583 | 192 | 113 | 2 | 112 | 301 | 226 | 416 | 8.28e-42 | 149 |
MsG0880045295.01.T01 | MTR_3g104070 | 46.429 | 112 | 45 | 4 | 3 | 100 | 43 | 153 | 1.12e-21 | 94.7 |
MsG0880045295.01.T01 | MTR_3g104030 | 39.378 | 193 | 114 | 2 | 112 | 302 | 155 | 346 | 4.63e-41 | 146 |
MsG0880045295.01.T01 | MTR_8g040850 | 30.579 | 363 | 182 | 11 | 2 | 302 | 36 | 390 | 1.22e-40 | 146 |
MsG0880045295.01.T01 | MTR_8g069665 | 61.538 | 91 | 34 | 1 | 10 | 100 | 103 | 192 | 1.68e-33 | 122 |
MsG0880045295.01.T01 | MTR_5g094280 | 32.046 | 259 | 122 | 7 | 2 | 209 | 23 | 278 | 5.43e-32 | 122 |
MsG0880045295.01.T01 | MTR_8g012985 | 35.922 | 206 | 118 | 7 | 105 | 300 | 36 | 237 | 8.50e-32 | 119 |
MsG0880045295.01.T01 | MTR_3g108680 | 27.586 | 348 | 181 | 13 | 12 | 302 | 53 | 386 | 5.78e-31 | 120 |
MsG0880045295.01.T01 | MTR_5g092260 | 26.611 | 357 | 184 | 11 | 2 | 302 | 50 | 384 | 3.11e-30 | 118 |
MsG0880045295.01.T01 | MTR_2g073050 | 71.831 | 71 | 19 | 1 | 236 | 306 | 1 | 70 | 6.77e-30 | 108 |
MsG0880045295.01.T01 | MTR_8g104480 | 34.500 | 200 | 113 | 7 | 112 | 300 | 145 | 337 | 1.27e-26 | 107 |
MsG0880045295.01.T01 | MTR_2g046390 | 26.074 | 349 | 180 | 10 | 13 | 300 | 37 | 368 | 3.20e-26 | 107 |
MsG0880045295.01.T01 | MTR_8g040890 | 36.269 | 193 | 114 | 6 | 112 | 300 | 231 | 418 | 2.86e-25 | 105 |
MsG0880045295.01.T01 | MTR_8g040890 | 36.000 | 100 | 61 | 2 | 2 | 98 | 36 | 135 | 6.63e-14 | 72.0 |
MsG0880045295.01.T01 | MTR_2g046520 | 31.579 | 209 | 130 | 7 | 104 | 302 | 35 | 240 | 4.12e-25 | 101 |
MsG0880045295.01.T01 | MTR_2g046430 | 31.579 | 209 | 130 | 7 | 104 | 302 | 35 | 240 | 1.36e-24 | 99.8 |
MsG0880045295.01.T01 | MTR_8g069950 | 80.000 | 55 | 11 | 0 | 133 | 187 | 58 | 112 | 5.95e-24 | 94.7 |
MsG0880045295.01.T01 | MTR_5g065260 | 32.474 | 194 | 118 | 5 | 112 | 300 | 41 | 226 | 2.35e-23 | 96.3 |
MsG0880045295.01.T01 | MTR_0009s0020 | 36.957 | 138 | 81 | 4 | 115 | 252 | 18 | 149 | 2.81e-22 | 91.3 |
MsG0880045295.01.T01 | MTR_7g072230 | 32.000 | 175 | 107 | 6 | 133 | 298 | 34 | 205 | 2.51e-21 | 90.1 |
MsG0880045295.01.T01 | MTR_2g046390 | 26.471 | 306 | 190 | 11 | 13 | 300 | 37 | 325 | 9.67e-19 | 85.5 |
MsG0880045295.01.T01 | MTR_2g046300 | 25.634 | 355 | 159 | 13 | 13 | 300 | 37 | 353 | 2.60e-18 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045295.01.T01 | AT1G10750 | 61.111 | 360 | 85 | 2 | 2 | 306 | 108 | 467 | 2.03e-161 | 458 |
MsG0880045295.01.T01 | AT1G23340 | 57.222 | 360 | 99 | 4 | 2 | 306 | 50 | 409 | 8.87e-146 | 416 |
MsG0880045295.01.T01 | AT1G23340 | 57.222 | 360 | 99 | 4 | 2 | 306 | 50 | 409 | 8.87e-146 | 416 |
MsG0880045295.01.T01 | AT1G70550 | 57.382 | 359 | 98 | 3 | 3 | 306 | 107 | 465 | 3.00e-144 | 414 |
MsG0880045295.01.T01 | AT5G50150 | 56.510 | 361 | 101 | 3 | 2 | 306 | 60 | 420 | 7.17e-142 | 407 |
MsG0880045295.01.T01 | AT5G18460 | 45.144 | 381 | 128 | 5 | 2 | 305 | 53 | 429 | 1.59e-114 | 337 |
MsG0880045295.01.T01 | AT3G13510 | 44.562 | 377 | 136 | 6 | 2 | 306 | 44 | 419 | 1.25e-108 | 322 |
MsG0880045295.01.T01 | AT1G55360 | 44.444 | 378 | 136 | 6 | 2 | 306 | 46 | 422 | 1.22e-107 | 320 |
MsG0880045295.01.T01 | AT5G56530 | 43.832 | 381 | 131 | 6 | 2 | 305 | 45 | 419 | 2.02e-104 | 311 |
MsG0880045295.01.T01 | AT5G56530 | 43.832 | 381 | 131 | 6 | 2 | 305 | 45 | 419 | 2.02e-104 | 311 |
MsG0880045295.01.T01 | AT2G44220 | 42.627 | 373 | 139 | 10 | 2 | 306 | 38 | 403 | 3.11e-94 | 285 |
MsG0880045295.01.T01 | AT2G44210 | 59.406 | 202 | 81 | 1 | 106 | 306 | 214 | 415 | 2.94e-88 | 270 |
MsG0880045295.01.T01 | AT2G44210 | 41.964 | 112 | 54 | 3 | 2 | 103 | 37 | 147 | 1.02e-19 | 89.4 |
MsG0880045295.01.T01 | AT2G44210 | 59.406 | 202 | 81 | 1 | 106 | 306 | 244 | 445 | 3.84e-88 | 271 |
MsG0880045295.01.T01 | AT2G44210 | 33.803 | 142 | 53 | 4 | 2 | 103 | 37 | 177 | 7.79e-15 | 75.1 |
MsG0880045295.01.T01 | AT2G17750 | 38.082 | 365 | 161 | 7 | 3 | 305 | 34 | 395 | 3.25e-85 | 261 |
MsG0880045295.01.T01 | AT3G48230 | 54.455 | 202 | 90 | 2 | 106 | 306 | 173 | 373 | 2.40e-74 | 233 |
MsG0880045295.01.T01 | AT5G19170 | 39.306 | 346 | 151 | 8 | 11 | 300 | 23 | 365 | 3.23e-73 | 231 |
MsG0880045295.01.T01 | AT1G23340 | 49.787 | 235 | 63 | 4 | 2 | 181 | 50 | 284 | 3.23e-70 | 220 |
MsG0880045295.01.T01 | AT2G44240 | 37.432 | 366 | 165 | 11 | 3 | 306 | 39 | 402 | 2.83e-66 | 213 |
MsG0880045295.01.T01 | AT2G44250 | 50.246 | 203 | 97 | 4 | 106 | 305 | 124 | 325 | 7.47e-64 | 204 |
MsG0880045295.01.T01 | AT2G19360 | 48.020 | 202 | 105 | 0 | 104 | 305 | 224 | 425 | 1.83e-63 | 206 |
MsG0880045295.01.T01 | AT2G19360 | 38.971 | 136 | 70 | 6 | 3 | 126 | 39 | 173 | 3.76e-20 | 90.5 |
MsG0880045295.01.T01 | AT2G44250 | 50.246 | 203 | 97 | 4 | 106 | 305 | 207 | 408 | 1.91e-63 | 206 |
MsG0880045295.01.T01 | AT2G44250 | 51.000 | 100 | 46 | 2 | 3 | 100 | 42 | 140 | 2.52e-17 | 82.0 |
MsG0880045295.01.T01 | AT5G25960 | 38.938 | 339 | 166 | 8 | 1 | 306 | 27 | 357 | 6.02e-61 | 198 |
MsG0880045295.01.T01 | AT2G20170 | 33.609 | 363 | 170 | 11 | 3 | 300 | 40 | 396 | 4.90e-57 | 189 |
MsG0880045295.01.T01 | AT2G20170 | 33.609 | 363 | 170 | 11 | 3 | 300 | 40 | 396 | 4.90e-57 | 189 |
MsG0880045295.01.T01 | AT2G20170 | 34.393 | 346 | 173 | 11 | 3 | 300 | 40 | 379 | 3.24e-56 | 186 |
MsG0880045295.01.T01 | AT1G10750 | 67.257 | 113 | 37 | 0 | 2 | 114 | 108 | 220 | 4.54e-52 | 175 |
MsG0880045295.01.T01 | AT4G23370 | 30.874 | 366 | 181 | 11 | 3 | 300 | 40 | 401 | 1.63e-50 | 172 |
MsG0880045295.01.T01 | AT4G23390 | 32.133 | 361 | 178 | 11 | 3 | 300 | 41 | 397 | 1.09e-49 | 170 |
MsG0880045295.01.T01 | AT1G70550 | 65.789 | 114 | 39 | 0 | 1 | 114 | 105 | 218 | 8.33e-48 | 162 |
MsG0880045295.01.T01 | AT5G25950 | 42.157 | 204 | 114 | 3 | 106 | 306 | 230 | 432 | 1.02e-47 | 166 |
MsG0880045295.01.T01 | AT5G25950 | 46.226 | 106 | 50 | 2 | 1 | 100 | 46 | 150 | 1.02e-14 | 74.7 |
MsG0880045295.01.T01 | AT4G23365 | 28.375 | 363 | 190 | 9 | 2 | 300 | 42 | 398 | 8.22e-45 | 157 |
MsG0880045295.01.T01 | AT2G35250 | 30.183 | 328 | 172 | 7 | 20 | 302 | 24 | 339 | 1.86e-39 | 141 |
MsG0880045295.01.T01 | AT4G17505 | 28.190 | 337 | 168 | 11 | 11 | 306 | 18 | 321 | 1.31e-36 | 134 |
MsG0880045295.01.T01 | AT4G23360 | 26.703 | 367 | 192 | 10 | 2 | 300 | 42 | 399 | 1.81e-32 | 124 |
MsG0880045295.01.T01 | AT4G23350 | 34.375 | 192 | 116 | 5 | 115 | 300 | 213 | 400 | 1.42e-31 | 122 |
MsG0880045295.01.T01 | AT4G23350 | 31.818 | 110 | 74 | 1 | 2 | 111 | 42 | 150 | 8.90e-12 | 65.9 |
MsG0880045295.01.T01 | AT2G27320 | 29.268 | 287 | 149 | 6 | 22 | 265 | 30 | 305 | 3.06e-31 | 119 |
MsG0880045295.01.T01 | AT4G23380 | 33.778 | 225 | 131 | 8 | 82 | 300 | 186 | 398 | 1.11e-30 | 119 |
MsG0880045295.01.T01 | AT4G23380 | 33.333 | 105 | 65 | 2 | 3 | 103 | 44 | 147 | 3.14e-12 | 67.0 |
MsG0880045295.01.T01 | AT4G23355 | 34.872 | 195 | 116 | 6 | 112 | 300 | 209 | 398 | 1.49e-30 | 119 |
MsG0880045295.01.T01 | AT1G10190 | 28.142 | 366 | 182 | 16 | 3 | 300 | 42 | 394 | 1.86e-28 | 113 |
MsG0880045295.01.T01 | AT5G05030 | 25.634 | 355 | 188 | 10 | 7 | 302 | 22 | 359 | 3.23e-24 | 101 |
MsG0880045295.01.T01 | AT4G15053 | 29.503 | 322 | 152 | 13 | 3 | 259 | 46 | 357 | 6.91e-24 | 100 |
MsG0880045295.01.T01 | AT5G46820 | 25.439 | 342 | 198 | 10 | 14 | 300 | 8 | 347 | 1.29e-23 | 99.4 |
MsG0880045295.01.T01 | AT5G25415 | 27.393 | 303 | 184 | 8 | 11 | 302 | 55 | 332 | 4.65e-23 | 97.4 |
MsG0880045295.01.T01 | AT4G23373 | 31.551 | 187 | 91 | 4 | 3 | 153 | 40 | 225 | 6.67e-22 | 94.0 |
MsG0880045295.01.T01 | AT2G24950 | 26.243 | 362 | 193 | 14 | 2 | 300 | 59 | 409 | 1.01e-21 | 94.7 |
MsG0880045295.01.T01 | AT5G46200 | 32.338 | 201 | 125 | 7 | 106 | 300 | 210 | 405 | 1.42e-21 | 94.4 |
MsG0880045295.01.T01 | AT5G46810 | 33.668 | 199 | 119 | 7 | 112 | 300 | 154 | 349 | 6.87e-21 | 92.0 |
MsG0880045295.01.T01 | AT5G25410 | 23.864 | 352 | 194 | 10 | 7 | 300 | 28 | 363 | 2.50e-20 | 90.5 |
MsG0880045295.01.T01 | AT5G60380 | 25.595 | 336 | 180 | 11 | 23 | 300 | 44 | 367 | 3.61e-20 | 90.1 |
MsG0880045295.01.T01 | AT4G10220 | 25.683 | 366 | 185 | 14 | 3 | 300 | 52 | 398 | 1.05e-19 | 89.0 |
MsG0880045295.01.T01 | AT5G11660 | 31.980 | 197 | 121 | 6 | 112 | 302 | 115 | 304 | 2.47e-19 | 87.0 |
MsG0880045295.01.T01 | AT4G15050 | 30.693 | 202 | 123 | 8 | 107 | 300 | 202 | 394 | 2.38e-18 | 85.1 |
MsG0880045295.01.T01 | AT4G15050 | 37.864 | 103 | 56 | 4 | 3 | 102 | 42 | 139 | 1.50e-13 | 70.9 |
MsG0880045295.01.T01 | AT4G10210 | 24.789 | 355 | 175 | 12 | 3 | 285 | 52 | 386 | 1.60e-17 | 82.8 |
MsG0880045295.01.T01 | AT4G17860 | 25.740 | 338 | 176 | 14 | 23 | 300 | 29 | 351 | 4.08e-17 | 81.3 |
MsG0880045295.01.T01 | AT5G37520 | 30.114 | 176 | 108 | 8 | 131 | 301 | 33 | 198 | 6.29e-15 | 72.4 |
MsG0880045295.01.T01 | AT2G38255 | 26.904 | 197 | 81 | 4 | 23 | 170 | 14 | 196 | 1.13e-14 | 72.0 |
MsG0880045295.01.T01 | AT5G04937 | 28.571 | 196 | 113 | 8 | 112 | 300 | 23 | 198 | 1.17e-14 | 72.0 |
MsG0880045295.01.T01 | AT5G36680 | 29.612 | 206 | 118 | 9 | 112 | 305 | 141 | 331 | 6.81e-14 | 71.6 |
MsG0880045295.01.T01 | AT5G36770 | 29.612 | 206 | 118 | 9 | 112 | 305 | 141 | 331 | 6.81e-14 | 71.6 |
Find 79 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCCTAGATTCTTTACTTAT+TGG | 0.120179 | 8:-57064649 | MsG0880045295.01.T01:CDS |
ATCCCTATTCACACACTTAA+AGG | 0.191236 | 8:-57062832 | MsG0880045295.01.T01:CDS |
TCTTGTATATTATAACAATT+TGG | 0.235227 | 8:+57062612 | None:intergenic |
TCTCCAACTTCTACATATAA+TGG | 0.288121 | 8:-57064400 | MsG0880045295.01.T01:CDS |
CCCATTTGCTTATGCTCTCT+TGG | 0.302334 | 8:+57066586 | None:intergenic |
CAAAATGTCCACTACCCATT+TGG | 0.328159 | 8:+57062739 | None:intergenic |
AGCCACCAATTCCCATGCTT+TGG | 0.330284 | 8:+57062894 | None:intergenic |
GGGAATTGGTGGCTTGAATA+TGG | 0.338331 | 8:-57062885 | MsG0880045295.01.T01:CDS |
GCTTGCTCTATTAACACATT+TGG | 0.344553 | 8:-57066463 | MsG0880045295.01.T01:CDS |
AGTGCAACAATGGTTCAATT+TGG | 0.351443 | 8:-57062807 | MsG0880045295.01.T01:CDS |
TATCCTTTAAGTGTGTGAAT+AGG | 0.369475 | 8:+57062829 | None:intergenic |
TTAGCTACAACATTGAGATT+TGG | 0.370876 | 8:+57062639 | None:intergenic |
TGCTACAATTTACTTTGCTC+TGG | 0.378764 | 8:-57064466 | MsG0880045295.01.T01:CDS |
GTCCAATAAGTAAAGAATCT+AGG | 0.379605 | 8:+57064647 | None:intergenic |
ATCCTTTAAGTGTGTGAATA+GGG | 0.384997 | 8:+57062830 | None:intergenic |
GTCTCACACTTCTACCCAAA+TGG | 0.386568 | 8:-57062754 | MsG0880045295.01.T01:CDS |
ATACAAGAAGGAACTAATAA+TGG | 0.394517 | 8:-57062597 | MsG0880045295.01.T01:CDS |
ACTAGCAGTAATATTGCAAT+TGG | 0.395249 | 8:-57064433 | MsG0880045295.01.T01:CDS |
TTGATATTAGCTTAATGATC+TGG | 0.397300 | 8:-57064369 | MsG0880045295.01.T01:CDS |
ACTGATGCATATCAAGGAAC+TGG | 0.402596 | 8:-57064490 | MsG0880045295.01.T01:CDS |
ATAGTGAATACAATGTCAAC+AGG | 0.406411 | 8:-57062777 | MsG0880045295.01.T01:CDS |
CAGGTCAGCCCAGAGCTCTA+TGG | 0.408690 | 8:-57064680 | MsG0880045295.01.T01:CDS |
TATGGATCTGGAAACTTGAT+TGG | 0.410366 | 8:-57062867 | MsG0880045295.01.T01:CDS |
TCATTAAGCTAATATCAAAT+TGG | 0.410645 | 8:+57064374 | None:intergenic |
CTGGAAACTTGATTGGGTAT+TGG | 0.411401 | 8:-57062860 | MsG0880045295.01.T01:CDS |
TTTCAATTGTGGAGTTTCTC+AGG | 0.412909 | 8:-57066547 | MsG0880045295.01.T01:CDS |
AGAAGGAACTAATAATGGTT+GGG | 0.415334 | 8:-57062592 | MsG0880045295.01.T01:CDS |
AAAATGTCCACTACCCATTT+GGG | 0.415939 | 8:+57062740 | None:intergenic |
CTAATCGGAATCGTTCCTTC+TGG | 0.418990 | 8:+57066514 | None:intergenic |
ACCAAGAGAGCATAAGCAAA+TGG | 0.428963 | 8:-57066587 | MsG0880045295.01.T01:CDS |
GCCTGCTGTTAAGACAATTC+AGG | 0.432132 | 8:-57066909 | MsG0880045295.01.T01:intron |
TAGTTATCCCCATAGAGCTC+TGG | 0.433611 | 8:+57064671 | None:intergenic |
AAAATTGAAACGTGTTAGAA+TGG | 0.456346 | 8:-57066437 | MsG0880045295.01.T01:CDS |
CCTCCATTATATGTAGAAGT+TGG | 0.467832 | 8:+57064397 | None:intergenic |
TGGTGGCTTGAATATGGATC+TGG | 0.475485 | 8:-57062879 | MsG0880045295.01.T01:CDS |
AGGATCCAAAGCATGGGAAT+TGG | 0.479599 | 8:-57062899 | MsG0880045295.01.T01:CDS |
TCCAATAAGTAAAGAATCTA+GGG | 0.480244 | 8:+57064648 | None:intergenic |
AGGTCAGCCCAGAGCTCTAT+GGG | 0.482474 | 8:-57064679 | MsG0880045295.01.T01:CDS |
ACCTGAATTGTCTTAACAGC+AGG | 0.484466 | 8:+57066908 | None:intergenic |
GCAACAATGGTTCAATTTGG+TGG | 0.484648 | 8:-57062804 | MsG0880045295.01.T01:CDS |
AAAATTATAACTTTCAATTG+TGG | 0.487536 | 8:-57066558 | MsG0880045295.01.T01:CDS |
AAGAAGGAACTAATAATGGT+TGG | 0.497939 | 8:-57062593 | MsG0880045295.01.T01:CDS |
CTTTAGAAATATGCAAGTTG+TGG | 0.502120 | 8:-57062688 | MsG0880045295.01.T01:CDS |
CCAAGAGAGCATAAGCAAAT+GGG | 0.509356 | 8:-57066586 | MsG0880045295.01.T01:CDS |
TTATGCTCTCTTGGTCTCTC+CGG | 0.511099 | 8:+57066595 | None:intergenic |
AGTTATCCCCATAGAGCTCT+GGG | 0.512647 | 8:+57064672 | None:intergenic |
TCTCACACTTCTACCCAAAT+GGG | 0.527784 | 8:-57062753 | MsG0880045295.01.T01:CDS |
ATCCAAAGCATGGGAATTGG+TGG | 0.528426 | 8:-57062896 | MsG0880045295.01.T01:CDS |
ATGGATCTGGAAACTTGATT+GGG | 0.531742 | 8:-57062866 | MsG0880045295.01.T01:CDS |
AACATAGGATGGTCAAAAGC+TGG | 0.536748 | 8:+57066748 | None:intergenic |
TTGCAGACTGATGCATATCA+AGG | 0.537288 | 8:-57064496 | MsG0880045295.01.T01:intron |
TTTATGTGTATAGGATCCTC+CGG | 0.539657 | 8:-57066614 | MsG0880045295.01.T01:intron |
CAATCTATGATATCACCATC+AGG | 0.544949 | 8:+57066790 | None:intergenic |
TTGTACCTCATGTCCATCGC+CGG | 0.547979 | 8:+57066408 | None:intergenic |
TTTGTCCTCTCAACATAGGA+TGG | 0.550432 | 8:+57066737 | None:intergenic |
GAAGGAACTAATAATGGTTG+GGG | 0.556689 | 8:-57062591 | MsG0880045295.01.T01:CDS |
TACAACATTGAGATTTGGCA+AGG | 0.560466 | 8:+57062644 | None:intergenic |
TAGATTCTTTACTTATTGGA+CGG | 0.561026 | 8:-57064645 | MsG0880045295.01.T01:intron |
TGCGTGTAGGATCCAAAGCA+TGG | 0.565093 | 8:-57062906 | MsG0880045295.01.T01:intron |
GTATATTATAACAATTTGGA+CGG | 0.567975 | 8:+57062616 | None:intergenic |
TTTACTATGGTGGTCCTGGA+AGG | 0.570062 | 8:-57062560 | MsG0880045295.01.T01:CDS |
ACTTCTACCCAAATGGGTAG+TGG | 0.571003 | 8:-57062747 | MsG0880045295.01.T01:CDS |
CTTAAAGGATAGTGCAACAA+TGG | 0.576183 | 8:-57062817 | MsG0880045295.01.T01:CDS |
TGCTCTCTTGGTCTCTCCGG+AGG | 0.583271 | 8:+57066598 | None:intergenic |
AGAATGGACACCACCGGCGA+TGG | 0.585596 | 8:-57066421 | MsG0880045295.01.T01:CDS |
AATTGTTATAATATACAAGA+AGG | 0.590507 | 8:-57062609 | MsG0880045295.01.T01:CDS |
TTTGACCATCCTATGTTGAG+AGG | 0.592755 | 8:-57066742 | MsG0880045295.01.T01:CDS |
CACCACCGGCGATGGACATG+AGG | 0.599402 | 8:-57066413 | MsG0880045295.01.T01:intron |
CTGATGCATATCAAGGAACT+GGG | 0.602205 | 8:-57064489 | MsG0880045295.01.T01:CDS |
AAGTGTGTGAATAGGGATGA+TGG | 0.604788 | 8:+57062837 | None:intergenic |
TACCTCATGTCCATCGCCGG+TGG | 0.612456 | 8:+57066411 | None:intergenic |
TATTAGCTTAATGATCTGGA+AGG | 0.620476 | 8:-57064365 | MsG0880045295.01.T01:intron |
TCAGGTGAATCATGTCCAGA+AGG | 0.626410 | 8:-57066529 | MsG0880045295.01.T01:CDS |
GCGTGTAGGATCCAAAGCAT+GGG | 0.628244 | 8:-57062905 | MsG0880045295.01.T01:intron |
ACAACATTGAGATTTGGCAA+GGG | 0.654257 | 8:+57062645 | None:intergenic |
CGTGTTAGAATGGACACCAC+CGG | 0.654611 | 8:-57066427 | MsG0880045295.01.T01:CDS |
CCAACTTCTACATATAATGG+AGG | 0.662547 | 8:-57064397 | MsG0880045295.01.T01:CDS |
TAGTGAATACAATGTCAACA+GGG | 0.716345 | 8:-57062776 | MsG0880045295.01.T01:CDS |
GGTCAGCCCAGAGCTCTATG+GGG | 0.745363 | 8:-57064678 | MsG0880045295.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATGATAAATTATG+TGG | + | Chr8:57066042-57066061 | None:intergenic | 10.0% |
!! | AAAAATAAAGGAATAAAAAA+AGG | + | Chr8:57066148-57066167 | None:intergenic | 10.0% |
!! | TGTATTAAAAAAAATGATAA+TGG | - | Chr8:57064945-57064964 | MsG0880045295.01.T01:intron | 10.0% |
!!! | TCTTTTGAAATAATTAATAT+CGG | - | Chr8:57063611-57063630 | MsG0880045295.01.T01:intron | 10.0% |
!!! | TCTTTTTTAAACTATTAAAA+AGG | - | Chr8:57066444-57066463 | MsG0880045295.01.T01:CDS | 10.0% |
!!! | TTTTATCAGAATATTATTTT+TGG | + | Chr8:57063821-57063840 | None:intergenic | 10.0% |
!! | AAAAAGAAAAAGAAAACATT+TGG | + | Chr8:57063653-57063672 | None:intergenic | 15.0% |
!! | AAAATTATAACTTTCAATTG+TGG | - | Chr8:57062916-57062935 | MsG0880045295.01.T01:intron | 15.0% |
!! | AAAGAAAATATAGACAAAAA+TGG | + | Chr8:57063410-57063429 | None:intergenic | 15.0% |
!! | AACAAATAGAACAATTAATT+TGG | - | Chr8:57064578-57064597 | MsG0880045295.01.T01:intron | 15.0% |
!! | AATTGTTATAATATACAAGA+AGG | - | Chr8:57066865-57066884 | MsG0880045295.01.T01:intron | 15.0% |
!! | ACAAAATTTCTTAAATTCAT+TGG | - | Chr8:57064659-57064678 | MsG0880045295.01.T01:CDS | 15.0% |
!! | ATTTATATTAGATTCAATGT+TGG | + | Chr8:57064015-57064034 | None:intergenic | 15.0% |
!! | CTATTGAAGATAAAAATAAT+TGG | + | Chr8:57063968-57063987 | None:intergenic | 15.0% |
!! | GTTAAATAAGAGAAAAATAA+AGG | + | Chr8:57066160-57066179 | None:intergenic | 15.0% |
!! | TCTTGTATATTATAACAATT+TGG | + | Chr8:57066865-57066884 | None:intergenic | 15.0% |
!! | TGAAAAAAAGAAACAAAAAA+GGG | + | Chr8:57066019-57066038 | None:intergenic | 15.0% |
!! | TTAAAAATTGTTTATAAACG+TGG | - | Chr8:57065329-57065348 | MsG0880045295.01.T01:intron | 15.0% |
!! | TTTATACATATCAAGAAAAA+TGG | + | Chr8:57064555-57064574 | None:intergenic | 15.0% |
!!! | AAAGTATCATTATTAAGTAT+TGG | + | Chr8:57064500-57064519 | None:intergenic | 15.0% |
!!! | AATATTTTGTAACAAATCAA+TGG | + | Chr8:57065601-57065620 | None:intergenic | 15.0% |
!!! | ATTTTTTACTTGTCATTTTA+AGG | - | Chr8:57064356-57064375 | MsG0880045295.01.T01:intron | 15.0% |
!!! | TTTTGGCTTATATAAAATTA+CGG | - | Chr8:57063323-57063342 | MsG0880045295.01.T01:intron | 15.0% |
!! | AAAACTAAGAAAAATACCAA+TGG | + | Chr8:57062765-57062784 | None:intergenic | 20.0% |
!! | AAATTGCTTATAAATGTGAT+CGG | + | Chr8:57065228-57065247 | None:intergenic | 20.0% |
!! | AACTTAACATAGATAGATAA+TGG | - | Chr8:57063222-57063241 | MsG0880045295.01.T01:intron | 20.0% |
!! | AGTAAAATACGCAAAATATT+AGG | + | Chr8:57066188-57066207 | None:intergenic | 20.0% |
!! | GTAAAATACGCAAAATATTA+GGG | + | Chr8:57066187-57066206 | None:intergenic | 20.0% |
!! | GTATATTATAACAATTTGGA+CGG | + | Chr8:57066861-57066880 | None:intergenic | 20.0% |
!! | GTGAAAAAAAGAAACAAAAA+AGG | + | Chr8:57066020-57066039 | None:intergenic | 20.0% |
!! | TACTTCAACTTATAATTGTT+CGG | - | Chr8:57062836-57062855 | MsG0880045295.01.T01:CDS | 20.0% |
!! | TATCAAGAAAAATGGATAAA+TGG | + | Chr8:57064547-57064566 | None:intergenic | 20.0% |
!! | TCATTAAGCTAATATCAAAT+TGG | + | Chr8:57065103-57065122 | None:intergenic | 20.0% |
!! | TTTCTTAAATTCATTGGATT+TGG | - | Chr8:57064665-57064684 | MsG0880045295.01.T01:CDS | 20.0% |
!!! | AAATCAATGGTTAGTTAATT+TGG | + | Chr8:57065588-57065607 | None:intergenic | 20.0% |
!!! | AAATGGTCAAATTTCTTTTA+CGG | + | Chr8:57063393-57063412 | None:intergenic | 20.0% |
!!! | AACAATTAATTTGGAAAGAA+GGG | - | Chr8:57064587-57064606 | MsG0880045295.01.T01:intron | 20.0% |
!!! | AATAATCTCATTGACTAAAT+TGG | + | Chr8:57065495-57065514 | None:intergenic | 20.0% |
!!! | AGTTTAAGTAATTTTTATGC+AGG | - | Chr8:57064775-57064794 | MsG0880045295.01.T01:intron | 20.0% |
!!! | ATAAAGTACTAACAACAAAT+TGG | - | Chr8:57064053-57064072 | MsG0880045295.01.T01:intron | 20.0% |
!!! | ATCTATGTTAAGTTGTTTTT+TGG | + | Chr8:57063216-57063235 | None:intergenic | 20.0% |
!!! | ATTTTACGTTAAATGTGTTT+TGG | - | Chr8:57063306-57063325 | MsG0880045295.01.T01:intron | 20.0% |
!!! | TCATTATTAAGTATTGGATT+TGG | + | Chr8:57064494-57064513 | None:intergenic | 20.0% |
!!! | TCTATGTTAAGTTGTTTTTT+GGG | + | Chr8:57063215-57063234 | None:intergenic | 20.0% |
!!! | TCTTCTTTTATTCTTCTAAT+CGG | + | Chr8:57062978-57062997 | None:intergenic | 20.0% |
!!! | TTTTATGTTTCTTTTCCTTA+TGG | - | Chr8:57063154-57063173 | MsG0880045295.01.T01:intron | 20.0% |
! | AAAATGACCTTAGAAGATTA+TGG | - | Chr8:57065153-57065172 | MsG0880045295.01.T01:intron | 25.0% |
! | AAAATTGAAACGTGTTAGAA+TGG | - | Chr8:57063037-57063056 | MsG0880045295.01.T01:intron | 25.0% |
! | AAATGACCTTAGAAGATTAT+GGG | - | Chr8:57065154-57065173 | MsG0880045295.01.T01:intron | 25.0% |
! | AAATTACCCATAATCTTCTA+AGG | + | Chr8:57065163-57065182 | None:intergenic | 25.0% |
! | AAGTAAATTGATTGAAGCAA+GGG | - | Chr8:57064853-57064872 | MsG0880045295.01.T01:intron | 25.0% |
! | AATGACAAGTAAAAAATGAG+TGG | + | Chr8:57064353-57064372 | None:intergenic | 25.0% |
! | AGTAGTAAAGTGAGTAAATA+TGG | + | Chr8:57065902-57065921 | None:intergenic | 25.0% |
! | AGTCAAAAAGAAGAAAACAA+AGG | + | Chr8:57066224-57066243 | None:intergenic | 25.0% |
! | ATACAAGAAGGAACTAATAA+TGG | - | Chr8:57066877-57066896 | MsG0880045295.01.T01:intron | 25.0% |
! | ATGACAAGTAAAAAATGAGT+GGG | + | Chr8:57064352-57064371 | None:intergenic | 25.0% |
! | ATTTACTCACTTTACTACTT+TGG | - | Chr8:57065903-57065922 | MsG0880045295.01.T01:intron | 25.0% |
! | GAAAATTTAAGCTGAAAATG+TGG | - | Chr8:57065647-57065666 | MsG0880045295.01.T01:intron | 25.0% |
! | GTTCAAATGTTAGTGAATTT+AGG | - | Chr8:57065874-57065893 | MsG0880045295.01.T01:intron | 25.0% |
! | TAAAGGAATAAAAAAAGGTG+TGG | + | Chr8:57066143-57066162 | None:intergenic | 25.0% |
! | TAAGTAAATTGATTGAAGCA+AGG | - | Chr8:57064852-57064871 | MsG0880045295.01.T01:intron | 25.0% |
! | TAGATTCTTTACTTATTGGA+CGG | - | Chr8:57064829-57064848 | MsG0880045295.01.T01:intron | 25.0% |
! | TCCAATAAGTAAAGAATCTA+GGG | + | Chr8:57064829-57064848 | None:intergenic | 25.0% |
! | TGACCACTTTAAATTGAAAA+AGG | + | Chr8:57063901-57063920 | None:intergenic | 25.0% |
! | TTAGAAGATTATGGGTAATT+TGG | - | Chr8:57065162-57065181 | MsG0880045295.01.T01:intron | 25.0% |
! | TTATTCCATACTTTACCATA+AGG | + | Chr8:57063172-57063191 | None:intergenic | 25.0% |
!! | CAATGTACATAATTTTGCAT+TGG | - | Chr8:57064740-57064759 | MsG0880045295.01.T01:intron | 25.0% |
!! | GAAAGAGATAAAAAGCATAA+GGG | + | Chr8:57065966-57065985 | None:intergenic | 25.0% |
!! | GAACAATTAATTTGGAAAGA+AGG | - | Chr8:57064586-57064605 | MsG0880045295.01.T01:intron | 25.0% |
!! | TGAAAGAGATAAAAAGCATA+AGG | + | Chr8:57065967-57065986 | None:intergenic | 25.0% |
!! | TTGATATTAGCTTAATGATC+TGG | - | Chr8:57065105-57065124 | MsG0880045295.01.T01:intron | 25.0% |
!!! | AGTCCTTTTTCAATTTAAAG+TGG | - | Chr8:57063895-57063914 | MsG0880045295.01.T01:intron | 25.0% |
!!! | ATAATCTTCTAAGGTCATTT+TGG | + | Chr8:57065154-57065173 | None:intergenic | 25.0% |
!!! | CATAGATAGATAATGGAAAT+TGG | - | Chr8:57063229-57063248 | MsG0880045295.01.T01:intron | 25.0% |
!!! | CATATGGTAGTATTTTTTGA+GGG | - | Chr8:57063257-57063276 | MsG0880045295.01.T01:intron | 25.0% |
!!! | CTTTAAGTTGTAAAAAGCAA+AGG | + | Chr8:57066106-57066125 | None:intergenic | 25.0% |
!!! | GATTTGGTTTTGCATTAAAT+AGG | - | Chr8:57064681-57064700 | MsG0880045295.01.T01:intron | 25.0% |
!!! | GTTTTTTTTTCTCTATTGAG+CGG | - | Chr8:57062780-57062799 | MsG0880045295.01.T01:CDS | 25.0% |
AAAAGCTAGCATAAATGTGT+GGG | - | Chr8:57064137-57064156 | MsG0880045295.01.T01:intron | 30.0% | |
AAGAAGGAACTAATAATGGT+TGG | - | Chr8:57066881-57066900 | MsG0880045295.01.T01:intron | 30.0% | |
AATTCAGCTTGTCTCAAATA+TGG | - | Chr8:57064184-57064203 | MsG0880045295.01.T01:intron | 30.0% | |
ACATACTTTAGTCCTTATGT+AGG | + | Chr8:57063455-57063474 | None:intergenic | 30.0% | |
ACCCTAGATTCTTTACTTAT+TGG | - | Chr8:57064825-57064844 | MsG0880045295.01.T01:intron | 30.0% | |
ACTAGCAGTAATATTGCAAT+TGG | - | Chr8:57065041-57065060 | MsG0880045295.01.T01:intron | 30.0% | |
AGAAGGAACTAATAATGGTT+GGG | - | Chr8:57066882-57066901 | MsG0880045295.01.T01:intron | 30.0% | |
AGTAAATACCAGTAGAAACT+TGG | + | Chr8:57065199-57065218 | None:intergenic | 30.0% | |
ATAGTGAATACAATGTCAAC+AGG | - | Chr8:57066697-57066716 | MsG0880045295.01.T01:intron | 30.0% | |
ATCCTTTAAGTGTGTGAATA+GGG | + | Chr8:57066647-57066666 | None:intergenic | 30.0% | |
ATGGAAATTGGTAAAGCATA+TGG | - | Chr8:57063241-57063260 | MsG0880045295.01.T01:intron | 30.0% | |
CAACATAAATGACACACAAA+AGG | - | Chr8:57065818-57065837 | MsG0880045295.01.T01:intron | 30.0% | |
CTTCTCAGTTTCTTAATATG+TGG | - | Chr8:57063941-57063960 | MsG0880045295.01.T01:intron | 30.0% | |
GTATCGTTGAAGATTTACTA+GGG | - | Chr8:57066331-57066350 | MsG0880045295.01.T01:intron | 30.0% | |
GTCCAATAAGTAAAGAATCT+AGG | + | Chr8:57064830-57064849 | None:intergenic | 30.0% | |
TAATGAGACTTCCAAACTAA+TGG | + | Chr8:57065701-57065720 | None:intergenic | 30.0% | |
TAGAATTGTAGAAGAAGCAA+GGG | - | Chr8:57065746-57065765 | MsG0880045295.01.T01:intron | 30.0% | |
TAGTGAATACAATGTCAACA+GGG | - | Chr8:57066698-57066717 | MsG0880045295.01.T01:intron | 30.0% | |
TATCCTTTAAGTGTGTGAAT+AGG | + | Chr8:57066648-57066667 | None:intergenic | 30.0% | |
TCTCCAACTTCTACATATAA+TGG | - | Chr8:57065074-57065093 | MsG0880045295.01.T01:intron | 30.0% | |
TGGCTTATATAAAATTACGG+TGG | - | Chr8:57063326-57063345 | MsG0880045295.01.T01:intron | 30.0% | |
TGTATCGTTGAAGATTTACT+AGG | - | Chr8:57066330-57066349 | MsG0880045295.01.T01:intron | 30.0% | |
TGTATTAATGTGAGACTACA+AGG | + | Chr8:57063771-57063790 | None:intergenic | 30.0% | |
TTAGCTACAACATTGAGATT+TGG | + | Chr8:57066838-57066857 | None:intergenic | 30.0% | |
! | AGACTAACTTTTCTTTTGGA+AGG | + | Chr8:57063370-57063389 | None:intergenic | 30.0% |
! | CTTTAGAAATATGCAAGTTG+TGG | - | Chr8:57066786-57066805 | MsG0880045295.01.T01:CDS | 30.0% |
! | CTTTTCCTTATGGTAAAGTA+TGG | - | Chr8:57063164-57063183 | MsG0880045295.01.T01:intron | 30.0% |
! | TATTAGCTTAATGATCTGGA+AGG | - | Chr8:57065109-57065128 | MsG0880045295.01.T01:intron | 30.0% |
!! | GGAAATTACTTTTACTATGG+TGG | - | Chr8:57066904-57066923 | MsG0880045295.01.T01:intron | 30.0% |
!! | TGGGGAAATTACTTTTACTA+TGG | - | Chr8:57066901-57066920 | MsG0880045295.01.T01:intron | 30.0% |
!! | TTGTTCGGTTTTATGTGTAT+AGG | - | Chr8:57062851-57062870 | MsG0880045295.01.T01:CDS | 30.0% |
!!! | GCATATGGTAGTATTTTTTG+AGG | - | Chr8:57063256-57063275 | MsG0880045295.01.T01:intron | 30.0% |
!!! | TTTGCACTGCTTTTTTTAGT+AGG | - | Chr8:57064322-57064341 | MsG0880045295.01.T01:intron | 30.0% |
!!! | TTTTTTGAGGGTAAAGCATA+TGG | - | Chr8:57063269-57063288 | MsG0880045295.01.T01:intron | 30.0% |
AAAATGTCCACTACCCATTT+GGG | + | Chr8:57066737-57066756 | None:intergenic | 35.0% | |
AAAGTGGTCACTGAATTTCA+TGG | - | Chr8:57063911-57063930 | MsG0880045295.01.T01:intron | 35.0% | |
AAATACCAGTAGAAACTTGG+AGG | + | Chr8:57065196-57065215 | None:intergenic | 35.0% | |
AATACCAGTAGAAACTTGGA+GGG | + | Chr8:57065195-57065214 | None:intergenic | 35.0% | |
ACAACATTGAGATTTGGCAA+GGG | + | Chr8:57066832-57066851 | None:intergenic | 35.0% | |
AGTGCAACAATGGTTCAATT+TGG | - | Chr8:57066667-57066686 | MsG0880045295.01.T01:intron | 35.0% | |
ATCCCTATTCACACACTTAA+AGG | - | Chr8:57066642-57066661 | MsG0880045295.01.T01:intron | 35.0% | |
ATGGATCTGGAAACTTGATT+GGG | - | Chr8:57066608-57066627 | MsG0880045295.01.T01:intron | 35.0% | |
ATTAATGTGAGACTACAAGG+AGG | + | Chr8:57063768-57063787 | None:intergenic | 35.0% | |
CAAAAGCTAGCATAAATGTG+TGG | - | Chr8:57064136-57064155 | MsG0880045295.01.T01:intron | 35.0% | |
CAATCTATGATATCACCATC+AGG | + | Chr8:57062687-57062706 | None:intergenic | 35.0% | |
CACAATGTTAGTGTTGTGTA+TGG | - | Chr8:57066474-57066493 | MsG0880045295.01.T01:CDS | 35.0% | |
CCAACTTCTACATATAATGG+AGG | - | Chr8:57065077-57065096 | MsG0880045295.01.T01:intron | 35.0% | |
CCTCCATTATATGTAGAAGT+TGG | + | Chr8:57065080-57065099 | None:intergenic | 35.0% | |
CTTAAAGGATAGTGCAACAA+TGG | - | Chr8:57066657-57066676 | MsG0880045295.01.T01:intron | 35.0% | |
GAAGGAACTAATAATGGTTG+GGG | - | Chr8:57066883-57066902 | MsG0880045295.01.T01:intron | 35.0% | |
GCTTGCTCTATTAACACATT+TGG | - | Chr8:57063011-57063030 | MsG0880045295.01.T01:intron | 35.0% | |
GTAGAATTGTAGAAGAAGCA+AGG | - | Chr8:57065745-57065764 | MsG0880045295.01.T01:intron | 35.0% | |
TAAATTGATTGAAGCAAGGG+AGG | - | Chr8:57064856-57064875 | MsG0880045295.01.T01:intron | 35.0% | |
TACAACATTGAGATTTGGCA+AGG | + | Chr8:57066833-57066852 | None:intergenic | 35.0% | |
TATGGATCTGGAAACTTGAT+TGG | - | Chr8:57066607-57066626 | MsG0880045295.01.T01:intron | 35.0% | |
TCTCAAATATGGATCATCTC+TGG | - | Chr8:57064195-57064214 | MsG0880045295.01.T01:intron | 35.0% | |
TCTCATAGTCAAAGTCTCAA+AGG | - | Chr8:57065625-57065644 | MsG0880045295.01.T01:intron | 35.0% | |
TGAGACAAGCTGAATTCATA+TGG | + | Chr8:57064180-57064199 | None:intergenic | 35.0% | |
TGCTACAATTTACTTTGCTC+TGG | - | Chr8:57065008-57065027 | MsG0880045295.01.T01:intron | 35.0% | |
TGTACATTGATGAAAGTGAG+AGG | + | Chr8:57064729-57064748 | None:intergenic | 35.0% | |
TTGCTTATAAATGTGATCGG+AGG | + | Chr8:57065225-57065244 | None:intergenic | 35.0% | |
TTGCTTCTATTTATGCGTGT+AGG | - | Chr8:57066555-57066574 | MsG0880045295.01.T01:CDS | 35.0% | |
TTTATGTGTATAGGATCCTC+CGG | - | Chr8:57062860-57062879 | MsG0880045295.01.T01:CDS | 35.0% | |
TTTCAATTGTGGAGTTTCTC+AGG | - | Chr8:57062927-57062946 | MsG0880045295.01.T01:intron | 35.0% | |
! | AAAAAAAGGTGTGGCGTTTA+TGG | + | Chr8:57066134-57066153 | None:intergenic | 35.0% |
! | ACGGAGACTAACTTTTCTTT+TGG | + | Chr8:57063374-57063393 | None:intergenic | 35.0% |
!! | AGAAGAAAACAAAGGTACCA+AGG | + | Chr8:57066216-57066235 | None:intergenic | 35.0% |
!!! | GTGATTTTAGCTCCTACATA+AGG | - | Chr8:57063440-57063459 | MsG0880045295.01.T01:intron | 35.0% |
!!! | GTTTCTGTTGTTTTCTGTGA+TGG | + | Chr8:57063094-57063113 | None:intergenic | 35.0% |
AACATAGGATGGTCAAAAGC+TGG | + | Chr8:57062729-57062748 | None:intergenic | 40.0% | |
AAGTGTGTGAATAGGGATGA+TGG | + | Chr8:57066640-57066659 | None:intergenic | 40.0% | |
ACATATGCTTGTGTTCGATG+TGG | - | Chr8:57066394-57066413 | MsG0880045295.01.T01:intron | 40.0% | |
ACCTGAATTGTCTTAACAGC+AGG | + | Chr8:57062569-57062588 | None:intergenic | 40.0% | |
ACTGATGCATATCAAGGAAC+TGG | - | Chr8:57064984-57065003 | MsG0880045295.01.T01:intron | 40.0% | |
ATATCCCTCCAAGTTTCTAC+TGG | - | Chr8:57065188-57065207 | MsG0880045295.01.T01:intron | 40.0% | |
ATGCAGTTGGATATGTGAGT+GGG | - | Chr8:57064097-57064116 | MsG0880045295.01.T01:intron | 40.0% | |
CAAAATGTCCACTACCCATT+TGG | + | Chr8:57066738-57066757 | None:intergenic | 40.0% | |
CATATGGACTTTCCACTTGT+GGG | + | Chr8:57064164-57064183 | None:intergenic | 40.0% | |
CTGATGCATATCAAGGAACT+GGG | - | Chr8:57064985-57065004 | MsG0880045295.01.T01:intron | 40.0% | |
CTGGAAACTTGATTGGGTAT+TGG | - | Chr8:57066614-57066633 | MsG0880045295.01.T01:intron | 40.0% | |
GATCTCAATACCATTGAAGC+TGG | - | Chr8:57064231-57064250 | MsG0880045295.01.T01:intron | 40.0% | |
GCAACAATGGTTCAATTTGG+TGG | - | Chr8:57066670-57066689 | MsG0880045295.01.T01:intron | 40.0% | |
GTTGAGAGGACAAAAACCAT+TGG | - | Chr8:57062746-57062765 | MsG0880045295.01.T01:CDS | 40.0% | |
TCAATACCATTGAAGCTGGT+TGG | - | Chr8:57064235-57064254 | MsG0880045295.01.T01:intron | 40.0% | |
TCATATGGACTTTCCACTTG+TGG | + | Chr8:57064165-57064184 | None:intergenic | 40.0% | |
TCTCACACTTCTACCCAAAT+GGG | - | Chr8:57066721-57066740 | MsG0880045295.01.T01:intron | 40.0% | |
TCTGACACACATTCAATCTG+AGG | + | Chr8:57066368-57066387 | None:intergenic | 40.0% | |
TGATGAAAGTGAGAGGTAGT+TGG | + | Chr8:57064722-57064741 | None:intergenic | 40.0% | |
TGTTTATAAACGTGGCACGA+TGG | - | Chr8:57065337-57065356 | MsG0880045295.01.T01:intron | 40.0% | |
TTGCAGACTGATGCATATCA+AGG | - | Chr8:57064978-57064997 | MsG0880045295.01.T01:intron | 40.0% | |
TTTGACCATCCTATGTTGAG+AGG | - | Chr8:57062732-57062751 | MsG0880045295.01.T01:CDS | 40.0% | |
TTTGTCCTCTCAACATAGGA+TGG | + | Chr8:57062740-57062759 | None:intergenic | 40.0% | |
! | ACCAAGAGAGCATAAGCAAA+TGG | - | Chr8:57062887-57062906 | MsG0880045295.01.T01:CDS | 40.0% |
! | CAAAGTGCTCAGAAAGAATG+AGG | + | Chr8:57066070-57066089 | None:intergenic | 40.0% |
! | CCAAGAGAGCATAAGCAAAT+GGG | - | Chr8:57062888-57062907 | MsG0880045295.01.T01:CDS | 40.0% |
! | CTCATTGACTAAATTGGCAC+AGG | + | Chr8:57065489-57065508 | None:intergenic | 40.0% |
! | GGACATTTTACATTCCTTCC+AGG | + | Chr8:57066931-57066950 | None:intergenic | 40.0% |
! | GGTTTTTGTCCTCTCAACAT+AGG | + | Chr8:57062744-57062763 | None:intergenic | 40.0% |
! | TACTTTTACTATGGTGGTCC+TGG | - | Chr8:57066910-57066929 | MsG0880045295.01.T01:CDS | 40.0% |
! | TGGATCATCTCTGGTTCATT+TGG | - | Chr8:57064204-57064223 | MsG0880045295.01.T01:intron | 40.0% |
!! | AGAAAACAAAGGTACCAAGG+TGG | + | Chr8:57066213-57066232 | None:intergenic | 40.0% |
AAAATGTGGCCAATGCATGG+TGG | - | Chr8:57065661-57065680 | MsG0880045295.01.T01:intron | 45.0% | |
AAATGTGGCCAATGCATGGT+GGG | - | Chr8:57065662-57065681 | MsG0880045295.01.T01:intron | 45.0% | |
AATGATGCACAGCATGCAGT+TGG | - | Chr8:57064084-57064103 | MsG0880045295.01.T01:intron | 45.0% | |
ACTTCTACCCAAATGGGTAG+TGG | - | Chr8:57066727-57066746 | MsG0880045295.01.T01:intron | 45.0% | |
AGGATCCAAAGCATGGGAAT+TGG | - | Chr8:57066575-57066594 | MsG0880045295.01.T01:CDS | 45.0% | |
AGTTATCCCCATAGAGCTCT+GGG | + | Chr8:57064805-57064824 | None:intergenic | 45.0% | |
ATATCACCATCAGGACTCTG+CGG | + | Chr8:57062678-57062697 | None:intergenic | 45.0% | |
ATCCAAAGCATGGGAATTGG+TGG | - | Chr8:57066578-57066597 | MsG0880045295.01.T01:CDS | 45.0% | |
ATTGATTGAAGCAAGGGAGG+TGG | - | Chr8:57064859-57064878 | MsG0880045295.01.T01:intron | 45.0% | |
CATGCAGTTGGATATGTGAG+TGG | - | Chr8:57064096-57064115 | MsG0880045295.01.T01:intron | 45.0% | |
CCCATTTGCTTATGCTCTCT+TGG | + | Chr8:57062891-57062910 | None:intergenic | 45.0% | |
CTAATCGGAATCGTTCCTTC+TGG | + | Chr8:57062963-57062982 | None:intergenic | 45.0% | |
CTGAAAATGTGGCCAATGCA+TGG | - | Chr8:57065658-57065677 | MsG0880045295.01.T01:intron | 45.0% | |
GCCTGCTGTTAAGACAATTC+AGG | - | Chr8:57062565-57062584 | MsG0880045295.01.T01:CDS | 45.0% | |
GTCTCACACTTCTACCCAAA+TGG | - | Chr8:57066720-57066739 | MsG0880045295.01.T01:intron | 45.0% | |
GTGAGTGGGAATGAGTACTA+TGG | - | Chr8:57064111-57064130 | MsG0880045295.01.T01:intron | 45.0% | |
TAGTTATCCCCATAGAGCTC+TGG | + | Chr8:57064806-57064825 | None:intergenic | 45.0% | |
TCAGGTGAATCATGTCCAGA+AGG | - | Chr8:57062945-57062964 | MsG0880045295.01.T01:intron | 45.0% | |
TGGTGGCTTGAATATGGATC+TGG | - | Chr8:57066595-57066614 | MsG0880045295.01.T01:CDS | 45.0% | |
TGTGAGACTACAAGGAGGAT+TGG | + | Chr8:57063763-57063782 | None:intergenic | 45.0% | |
TTATGCTCTCTTGGTCTCTC+CGG | + | Chr8:57062882-57062901 | None:intergenic | 45.0% | |
TTTACTATGGTGGTCCTGGA+AGG | - | Chr8:57066914-57066933 | MsG0880045295.01.T01:CDS | 45.0% | |
! | AGACTACAAGGAGGATTGGT+TGG | + | Chr8:57063759-57063778 | None:intergenic | 45.0% |
! | AGTGGACATTTTGCTGAGGA+GGG | - | Chr8:57066745-57066764 | MsG0880045295.01.T01:CDS | 45.0% |
! | GCGTATTTTACTCACCACCT+TGG | - | Chr8:57066196-57066215 | MsG0880045295.01.T01:intron | 45.0% |
! | GGGAATTGGTGGCTTGAATA+TGG | - | Chr8:57066589-57066608 | MsG0880045295.01.T01:CDS | 45.0% |
!! | TAGTGGACATTTTGCTGAGG+AGG | - | Chr8:57066744-57066763 | MsG0880045295.01.T01:CDS | 45.0% |
!!! | TTAATACATTTTTTATTAAT+GGG | + | Chr8:57064933-57064952 | None:intergenic | 5.0% |
!!! | TTTAATACATTTTTTATTAA+TGG | + | Chr8:57064934-57064953 | None:intergenic | 5.0% |
!!! | TTTTTTTAAGAAAAAATAAA+TGG | - | Chr8:57062621-57062640 | MsG0880045295.01.T01:CDS | 5.0% |
AAATGTGTGGGTCCCACAAG+TGG | - | Chr8:57064149-57064168 | MsG0880045295.01.T01:intron | 50.0% | |
AATGTGGCCAATGCATGGTG+GGG | - | Chr8:57065663-57065682 | MsG0880045295.01.T01:intron | 50.0% | |
AGCCACCAATTCCCATGCTT+TGG | + | Chr8:57066583-57066602 | None:intergenic | 50.0% | |
CGTGTTAGAATGGACACCAC+CGG | - | Chr8:57063047-57063066 | MsG0880045295.01.T01:intron | 50.0% | |
GCGTGTAGGATCCAAAGCAT+GGG | - | Chr8:57066569-57066588 | MsG0880045295.01.T01:CDS | 50.0% | |
TACCATTGAAGCTGGTTGGC+AGG | - | Chr8:57064239-57064258 | MsG0880045295.01.T01:intron | 50.0% | |
TGCGTGTAGGATCCAAAGCA+TGG | - | Chr8:57066568-57066587 | MsG0880045295.01.T01:CDS | 50.0% | |
TTGTACCTCATGTCCATCGC+CGG | + | Chr8:57063069-57063088 | None:intergenic | 50.0% | |
! | CATGGGGCACTCCATTAGTT+TGG | - | Chr8:57065687-57065706 | MsG0880045295.01.T01:intron | 50.0% |
! | GTTTTTCCGCAGAGTCCTGA+TGG | - | Chr8:57062669-57062688 | MsG0880045295.01.T01:CDS | 50.0% |
!!! | GGGTAGTGGACATTTTGCTG+AGG | - | Chr8:57066741-57066760 | MsG0880045295.01.T01:CDS | 50.0% |
AGGTCAGCCCAGAGCTCTAT+GGG | - | Chr8:57064795-57064814 | MsG0880045295.01.T01:intron | 55.0% | |
ATGTGGCCAATGCATGGTGG+GGG | - | Chr8:57065664-57065683 | MsG0880045295.01.T01:intron | 55.0% | |
TGCCTGCCAACCAGCTTCAA+TGG | + | Chr8:57064244-57064263 | None:intergenic | 55.0% | |
AGAATGGACACCACCGGCGA+TGG | - | Chr8:57063053-57063072 | MsG0880045295.01.T01:intron | 60.0% | |
CAGGTCAGCCCAGAGCTCTA+TGG | - | Chr8:57064794-57064813 | MsG0880045295.01.T01:intron | 60.0% | |
GGTCAGCCCAGAGCTCTATG+GGG | - | Chr8:57064796-57064815 | MsG0880045295.01.T01:intron | 60.0% | |
TACCTCATGTCCATCGCCGG+TGG | + | Chr8:57063066-57063085 | None:intergenic | 60.0% | |
TGCTCTCTTGGTCTCTCCGG+AGG | + | Chr8:57062879-57062898 | None:intergenic | 60.0% | |
! | CAATGCATGGTGGGGGCATG+GGG | - | Chr8:57065671-57065690 | MsG0880045295.01.T01:intron | 60.0% |
! | CCAATGCATGGTGGGGGCAT+GGG | - | Chr8:57065670-57065689 | MsG0880045295.01.T01:intron | 60.0% |
CACCACCGGCGATGGACATG+AGG | - | Chr8:57063061-57063080 | MsG0880045295.01.T01:intron | 65.0% | |
CCCATGCCCCCACCATGCAT+TGG | + | Chr8:57065673-57065692 | None:intergenic | 65.0% | |
TTTGTGTGCGCGCGCGCGTT+TGG | - | Chr8:57066506-57066525 | MsG0880045295.01.T01:CDS | 65.0% | |
! | GCCAATGCATGGTGGGGGCA+TGG | - | Chr8:57065669-57065688 | MsG0880045295.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 57062542 | 57066954 | 57062542 | ID=MsG0880045295.01;Name=MsG0880045295.01 |
Chr8 | mRNA | 57062542 | 57066954 | 57062542 | ID=MsG0880045295.01.T01;Parent=MsG0880045295.01;Name=MsG0880045295.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|6|0|306 |
Chr8 | exon | 57066910 | 57066954 | 57066910 | ID=MsG0880045295.01.T01:exon:24414;Parent=MsG0880045295.01.T01 |
Chr8 | exon | 57066729 | 57066815 | 57066729 | ID=MsG0880045295.01.T01:exon:24413;Parent=MsG0880045295.01.T01 |
Chr8 | exon | 57066414 | 57066623 | 57066414 | ID=MsG0880045295.01.T01:exon:24412;Parent=MsG0880045295.01.T01 |
Chr8 | exon | 57064646 | 57064699 | 57064646 | ID=MsG0880045295.01.T01:exon:24411;Parent=MsG0880045295.01.T01 |
Chr8 | exon | 57064366 | 57064512 | 57064366 | ID=MsG0880045295.01.T01:exon:24410;Parent=MsG0880045295.01.T01 |
Chr8 | exon | 57062542 | 57062919 | 57062542 | ID=MsG0880045295.01.T01:exon:24409;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57066910 | 57066954 | 57066910 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57066729 | 57066815 | 57066729 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57066414 | 57066623 | 57066414 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57064646 | 57064699 | 57064646 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57064366 | 57064512 | 57064366 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Chr8 | CDS | 57062542 | 57062919 | 57062542 | ID=MsG0880045295.01.T01:cds;Parent=MsG0880045295.01.T01 |
Gene Sequence |
Protein sequence |