AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045495.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045495.01.T01 MTR_8g072540 96.842 95 3 0 27 121 223 317 9.04e-62 191
MsG0880045495.01.T01 MTR_1g036110 78.947 95 20 0 27 121 220 314 1.13e-48 157
MsG0880045495.01.T01 MTR_5g024990 64.211 95 34 0 27 121 227 321 4.79e-41 138
MsG0880045495.01.T01 MTR_8g072550 53.571 112 35 1 27 121 224 335 6.21e-34 120
MsG0880045495.01.T01 MTR_3g024230 96.296 27 1 0 1 27 1 27 2.28e-12 58.5
MsG0880045495.01.T01 MTR_6g034845 86.207 29 4 0 2 30 3 31 4.90e-11 57.0
MsG0880045495.01.T01 MTR_1g064310 83.333 30 5 0 1 30 1 30 7.96e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045495.01.T01 AT3G51520 51.579 95 45 1 27 121 221 314 7.22e-31 112

Find 49 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCTTTCCATTAATATTC+TGG 0.193871 8:+60045818 MsG0880045495.01.T01:CDS
TTTCTCATCCCCATTGGATA+TGG 0.198848 8:+60041154 MsG0880045495.01.T01:CDS
TCAACCAACTCAAATATATA+TGG 0.248127 8:-60047557 None:intergenic
TTAATATTCTGGGGAAAATT+CGG 0.275511 8:+60045829 MsG0880045495.01.T01:CDS
TCACACCTTATTATTATTGA+TGG 0.304039 8:+60047623 MsG0880045495.01.T01:three_prime_UTR
ATCCCCGTCCCCGACGGATT+CGG 0.315656 8:-60041122 None:intergenic
TCCCCGTCCCCGACGGATTC+GGG 0.332757 8:-60041121 None:intergenic
ATGCGGGGACGGGGATGGGG+CGG 0.335890 8:+60041093 None:intergenic
AGGATCCATCAATAATAATA+AGG 0.346516 8:-60047628 None:intergenic
ACCTGCTCTGATGTTGGTTC+TGG 0.359832 8:-60047024 None:intergenic
TAATATTCTGGGGAAAATTC+GGG 0.361300 8:+60045830 MsG0880045495.01.T01:CDS
GCGGGGACGGGGATGGGGCG+GGG 0.367690 8:+60041095 None:intergenic
TATAAGTGGTGGAAAGCTTC+TGG 0.368419 8:+60045763 MsG0880045495.01.T01:CDS
GATCTTTCCATTAATATTCT+GGG 0.370352 8:+60045819 MsG0880045495.01.T01:CDS
CGGGGATACCCGAATCCGTC+GGG 0.390930 8:+60041113 MsG0880045495.01.T01:CDS
TACCCGAATCCGTCGGGGAC+GGG 0.404089 8:+60041119 MsG0880045495.01.T01:CDS
ATCCGTCGGGGACGGGGATG+AGG 0.412662 8:+60041126 MsG0880045495.01.T01:CDS
ACCCGAATCCGTCGGGGACG+GGG 0.415112 8:+60041120 MsG0880045495.01.T01:CDS
TGCGGGGACGGGGATGGGGC+GGG 0.431545 8:+60041094 None:intergenic
TTCTCATCCCCATTGGATAT+GGG 0.433213 8:+60041155 MsG0880045495.01.T01:CDS
GGTGGTGGGTAAACCAATTC+AGG 0.442053 8:+60046990 MsG0880045495.01.T01:CDS
AACAAACTCACTATGTACTT+TGG 0.442455 8:-60047441 None:intergenic
ACATACAATGGATTCTTGAA+TGG 0.469129 8:-60046967 None:intergenic
CAACCAACTCAAATATATAT+GGG 0.483034 8:-60047556 None:intergenic
TTACCCTACCCATATCCAAT+GGG 0.484936 8:-60041163 None:intergenic
GTTCAATTTCTCATCCCCAT+TGG 0.487757 8:+60041148 MsG0880045495.01.T01:CDS
CATCCCATATATATTTGAGT+TGG 0.496252 8:+60047553 MsG0880045495.01.T01:three_prime_UTR
GAATCCATTGTATGTGGTGG+TGG 0.497824 8:+60046975 MsG0880045495.01.T01:CDS
ATACCCGAATCCGTCGGGGA+CGG 0.498050 8:+60041118 MsG0880045495.01.T01:CDS
AATGGATTCTTGAATGGTAC+AGG 0.498388 8:-60046961 None:intergenic
GCGGGGATACCCGAATCCGT+CGG 0.505570 8:+60041112 MsG0880045495.01.T01:CDS
TCCAGAACCAACATCAGAGC+AGG 0.538241 8:+60047023 MsG0880045495.01.T01:CDS
GAACGACACAAGACTCAAGC+TGG 0.541089 8:+60047485 MsG0880045495.01.T01:CDS
TTACCCACCACCACATACAA+TGG 0.555274 8:-60046979 None:intergenic
CATCCCCATTGGATATGGGT+AGG 0.561797 8:+60041159 MsG0880045495.01.T01:CDS
ATTCAAGAATCCATTGTATG+TGG 0.565867 8:+60046969 MsG0880045495.01.T01:CDS
ATCCCCATTGGATATGGGTA+GGG 0.566047 8:+60041160 MsG0880045495.01.T01:CDS
ATCTTTCCATTAATATTCTG+GGG 0.566749 8:+60045820 MsG0880045495.01.T01:CDS
GTTACCCTACCCATATCCAA+TGG 0.567434 8:-60041164 None:intergenic
CGTAGACAGATATCTATAAG+TGG 0.577657 8:+60045749 MsG0880045495.01.T01:intron
AGTTAATTCAAAATCTTGCA+AGG 0.577968 8:+60045788 MsG0880045495.01.T01:CDS
AACCTCATCCCCGTCCCCGA+CGG 0.590523 8:-60041128 None:intergenic
GTACATACCTGCTCTGATGT+TGG 0.598523 8:-60047030 None:intergenic
ATATATATGGGATGAAATCG+TGG 0.615621 8:-60047544 None:intergenic
AGACAGATATCTATAAGTGG+TGG 0.640907 8:+60045752 MsG0880045495.01.T01:intron
GGGGATACCCGAATCCGTCG+GGG 0.652187 8:+60041114 MsG0880045495.01.T01:CDS
CAAGAATCCATTGTATGTGG+TGG 0.680708 8:+60046972 MsG0880045495.01.T01:CDS
AATCCATTGTATGTGGTGGT+GGG 0.689098 8:+60046976 MsG0880045495.01.T01:CDS
TACCCTACCCATATCCAATG+GGG 0.733750 8:-60041162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGGAAAAATAATATAAATT+GGG - Chr8:60045536-60045555 None:intergenic 10.0%
!! TCTTAAAAAAAAATAAGAAT+TGG - Chr8:60042475-60042494 None:intergenic 10.0%
!!! AGATCTATATATATTTTTTA+AGG - Chr8:60041621-60041640 None:intergenic 10.0%
!!! ATAAACTTTTTTTTTTTTGA+AGG + Chr8:60046353-60046372 MsG0880045495.01.T01:intron 10.0%
!!! CATTTTTTTAATTTTCATTT+GGG + Chr8:60045725-60045744 MsG0880045495.01.T01:intron 10.0%
!!! GAAAAAACTATATTTTTATT+TGG - Chr8:60047115-60047134 None:intergenic 10.0%
!!! TTATATTTTAATTGTTTTCT+TGG + Chr8:60044889-60044908 MsG0880045495.01.T01:intron 10.0%
!!! TTTTAATTTTTATATTGAGT+TGG + Chr8:60042335-60042354 MsG0880045495.01.T01:intron 10.0%
!! AAATTATCCTTATTAACTAT+TGG + Chr8:60043262-60043281 MsG0880045495.01.T01:intron 15.0%
!! AATAACTAAGTTAATAATAC+TGG + Chr8:60046838-60046857 MsG0880045495.01.T01:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - Chr8:60043263-60043282 None:intergenic 15.0%
!! ATTCTAGTAAAAGTTAAAAA+TGG - Chr8:60043812-60043831 None:intergenic 15.0%
!! ATTCTTCAATTATTGAAAAT+GGG - Chr8:60041718-60041737 None:intergenic 15.0%
!! CTGTTAATAAAAAAAATGAA+CGG + Chr8:60042796-60042815 MsG0880045495.01.T01:intron 15.0%
!! GAAGGAAAAATAATATAAAT+TGG - Chr8:60045537-60045556 None:intergenic 15.0%
!! GATAAAAATAATTGCATATT+TGG + Chr8:60045138-60045157 MsG0880045495.01.T01:intron 15.0%
!! GTAAACAGTAAAAAAAATTA+AGG - Chr8:60041966-60041985 None:intergenic 15.0%
!!! AAAACTATATTTTTATTTGG+AGG - Chr8:60047112-60047131 None:intergenic 15.0%
!!! AAATCTAGCTTATATTAAAT+TGG - Chr8:60044040-60044059 None:intergenic 15.0%
!!! AATATAGAGGATATATTTTT+CGG - Chr8:60045686-60045705 None:intergenic 15.0%
!!! ATATCATCAGTATTTTTTTT+AGG - Chr8:60046920-60046939 None:intergenic 15.0%
!!! ATTTTATTCACTTTCTTTTT+TGG + Chr8:60043886-60043905 MsG0880045495.01.T01:intron 15.0%
!!! ATTTTGTTCTACTTAAAAAT+TGG - Chr8:60043667-60043686 None:intergenic 15.0%
!!! CAATTAAATTTGTTATTTGA+CGG + Chr8:60044140-60044159 MsG0880045495.01.T01:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + Chr8:60043389-60043408 MsG0880045495.01.T01:intron 15.0%
!!! GAAAAATTTAATTTCTTTGT+TGG + Chr8:60044988-60045007 MsG0880045495.01.T01:intron 15.0%
!!! GCATTTTTTTAATTTTCATT+TGG + Chr8:60045724-60045743 MsG0880045495.01.T01:intron 15.0%
!!! TAGTTTTAAAAAGTAATACT+TGG + Chr8:60043286-60043305 MsG0880045495.01.T01:intron 15.0%
!!! TATACTTTTTTTTTTAACCA+AGG - Chr8:60047087-60047106 None:intergenic 15.0%
!!! TGAATTTTATATTTACCATA+TGG + Chr8:60046650-60046669 MsG0880045495.01.T01:intron 15.0%
!!! TTACGTTAGTTTTAAATTTT+TGG + Chr8:60045370-60045389 MsG0880045495.01.T01:intron 15.0%
!!! TTATTTATCCTTTTTTACTT+TGG + Chr8:60047408-60047427 MsG0880045495.01.T01:intron 15.0%
!!! TTCATTTATTTTTGTAAGAA+CGG + Chr8:60046688-60046707 MsG0880045495.01.T01:intron 15.0%
!!! TTTGATTTGATTATTCATTT+TGG + Chr8:60042543-60042562 MsG0880045495.01.T01:intron 15.0%
!!! TTTTTTGTCAAGTAATTTAT+TGG + Chr8:60044434-60044453 MsG0880045495.01.T01:intron 15.0%
!! AAACTAACCAATAGTTAATA+AGG - Chr8:60043272-60043291 None:intergenic 20.0%
!! AAGAAATCACTTTATACAAT+AGG - Chr8:60045966-60045985 None:intergenic 20.0%
!! AAGATAGTAGTATTAATTAG+GGG - Chr8:60042941-60042960 None:intergenic 20.0%
!! AATATAACATTCAAACCATA+TGG - Chr8:60046668-60046687 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + Chr8:60043229-60043248 MsG0880045495.01.T01:intron 20.0%
!! AATTGAAAAAAGAATACATG+AGG - Chr8:60041590-60041609 None:intergenic 20.0%
!! ACAAGATAGTAGTATTAATT+AGG - Chr8:60042943-60042962 None:intergenic 20.0%
!! ACCTTTAAACATTATGTTTA+TGG + Chr8:60046387-60046406 MsG0880045495.01.T01:intron 20.0%
!! AGAAAATGTTATTATTGCAT+TGG + Chr8:60043349-60043368 MsG0880045495.01.T01:intron 20.0%
!! AGTAAATTGAATAAAGTTGT+TGG - Chr8:60043929-60043948 None:intergenic 20.0%
!! ATCAAGAATTTATCAAGAAA+AGG + Chr8:60044110-60044129 MsG0880045495.01.T01:intron 20.0%
!! ATGAGTACATGAATATTAAA+GGG - Chr8:60046244-60046263 None:intergenic 20.0%
!! ATTTAATGAGAAAGTAAGAA+AGG - Chr8:60043996-60044015 None:intergenic 20.0%
!! CAAAGTTTCAATTGAAAAAA+TGG + Chr8:60045116-60045135 MsG0880045495.01.T01:intron 20.0%
!! CAAGATAGTAGTATTAATTA+GGG - Chr8:60042942-60042961 None:intergenic 20.0%
!! CATTCTTCAATTATTGAAAA+TGG - Chr8:60041719-60041738 None:intergenic 20.0%
!! CGTCAAATAACAAATTTAAT+TGG - Chr8:60044142-60044161 None:intergenic 20.0%
!! CTAACAAGAAATCTTATATT+TGG - Chr8:60044767-60044786 None:intergenic 20.0%
!! GAAAAATATATCCTCTATAT+TGG + Chr8:60045685-60045704 MsG0880045495.01.T01:intron 20.0%
!! GTATATCTTAAAGAAAGAAA+AGG + Chr8:60045244-60045263 MsG0880045495.01.T01:intron 20.0%
!! GTCATTAAATGATTGAATAT+TGG - Chr8:60044290-60044309 None:intergenic 20.0%
!! TACAACCAACTAAAAATATT+TGG + Chr8:60047320-60047339 MsG0880045495.01.T01:intron 20.0%
!! TATGAGTACATGAATATTAA+AGG - Chr8:60046245-60046264 None:intergenic 20.0%
!! TCCATAAACATAATGTTTAA+AGG - Chr8:60046391-60046410 None:intergenic 20.0%
!! TCTCATTAAATTGTAACAAA+AGG + Chr8:60044005-60044024 MsG0880045495.01.T01:intron 20.0%
!! TGAATGTAAACATCAAATAT+GGG - Chr8:60047267-60047286 None:intergenic 20.0%
!! TTAATGTTGTCAATATATAC+AGG + Chr8:60044379-60044398 MsG0880045495.01.T01:intron 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG + Chr8:60043060-60043079 MsG0880045495.01.T01:intron 20.0%
!!! AAAGTTTATTCTTTAAGATG+TGG - Chr8:60046342-60046361 None:intergenic 20.0%
!!! ACACATGTTATATTTCTATT+AGG - Chr8:60045217-60045236 None:intergenic 20.0%
!!! AGAAATCTTATATTTGGAAT+AGG - Chr8:60044761-60044780 None:intergenic 20.0%
!!! AGAGTGTGATTATTTTTTTT+TGG + Chr8:60042716-60042735 MsG0880045495.01.T01:intron 20.0%
!!! ATATAGAGGATATATTTTTC+GGG - Chr8:60045685-60045704 None:intergenic 20.0%
!!! ATCAGTATTTTTTTTAGGAA+TGG - Chr8:60046915-60046934 None:intergenic 20.0%
!!! ATCTTCCAAATATTTTTAGT+TGG - Chr8:60047328-60047347 None:intergenic 20.0%
!!! ATTTCACGTAAAAGTATATT+GGG + Chr8:60046737-60046756 MsG0880045495.01.T01:intron 20.0%
!!! ATTTTTTTCATTTGCTAACT+GGG - Chr8:60046809-60046828 None:intergenic 20.0%
!!! GAAATTATAGCAAGATATTT+TGG + Chr8:60041681-60041700 MsG0880045495.01.T01:intron 20.0%
!!! GCAGTTTTCAAATAAAAAAA+CGG - Chr8:60041297-60041316 None:intergenic 20.0%
!!! GTTAGTTTTAAATTTTTGGT+TGG + Chr8:60045374-60045393 MsG0880045495.01.T01:intron 20.0%
!!! TACCATATTTAAGACAAATA+TGG + Chr8:60044936-60044955 MsG0880045495.01.T01:intron 20.0%
!!! TATTTCACGTAAAAGTATAT+TGG + Chr8:60046736-60046755 MsG0880045495.01.T01:intron 20.0%
!!! TCTTCATTTTAGTAAGTATA+TGG - Chr8:60046563-60046582 None:intergenic 20.0%
!!! TTCAAACAATTTTCAACTTA+AGG - Chr8:60047520-60047539 None:intergenic 20.0%
!!! TTCAAACTAAGATTTGTTTT+TGG + Chr8:60042386-60042405 MsG0880045495.01.T01:intron 20.0%
!!! TTTCTTTTTTGGTACAAAAA+AGG + Chr8:60043897-60043916 MsG0880045495.01.T01:intron 20.0%
!!! TTTTAACATTTCCAAATGAA+CGG + Chr8:60046510-60046529 MsG0880045495.01.T01:intron 20.0%
! AATGCAGAAGTTGTTTATTT+GGG - Chr8:60042368-60042387 None:intergenic 25.0%
! ACCTAAAACCAAAGTAAAAA+AGG - Chr8:60047419-60047438 None:intergenic 25.0%
! ACTTGACAAAAAAAGTTCAT+AGG - Chr8:60044427-60044446 None:intergenic 25.0%
! AGATCTTTCCATTAATATTC+TGG + Chr8:60045818-60045837 MsG0880045495.01.T01:CDS 25.0%
! AGGATCCATCAATAATAATA+AGG - Chr8:60047631-60047650 None:intergenic 25.0%
! AGTTAATTCAAAATCTTGCA+AGG + Chr8:60045788-60045807 MsG0880045495.01.T01:CDS 25.0%
! ATCACACTTATTCATCTTTA+AGG - Chr8:60042771-60042790 None:intergenic 25.0%
! ATCTTTCCATTAATATTCTG+GGG + Chr8:60045820-60045839 MsG0880045495.01.T01:CDS 25.0%
! ATGACAAAAATAAGGATCAT+AGG - Chr8:60045351-60045370 None:intergenic 25.0%
! ATGTGTAACTAAAGTTGTTT+AGG + Chr8:60041530-60041549 MsG0880045495.01.T01:intron 25.0%
! ATTACTCTATTCCAATTAAG+AGG - Chr8:60046767-60046786 None:intergenic 25.0%
! CAACCAACTCAAATATATAT+GGG - Chr8:60047559-60047578 None:intergenic 25.0%
! CAATTTACTCTTAACATTCT+CGG + Chr8:60043940-60043959 MsG0880045495.01.T01:intron 25.0%
! CATACTCAACAAAACTTTAT+GGG - Chr8:60044263-60044282 None:intergenic 25.0%
! CTAACGTAATGACAAAAATA+AGG - Chr8:60045359-60045378 None:intergenic 25.0%
! CTAATCAAAATACTCTTAAG+AGG - Chr8:60042272-60042291 None:intergenic 25.0%
! CTTACTAAAATGAAGATTGA+TGG + Chr8:60046567-60046586 MsG0880045495.01.T01:intron 25.0%
! GATCTTTCCATTAATATTCT+GGG + Chr8:60045819-60045838 MsG0880045495.01.T01:CDS 25.0%
! GATTAGTGTGTATATATGAA+TGG - Chr8:60047240-60047259 None:intergenic 25.0%
! GGACGAAAATAAAATCAAAT+GGG - Chr8:60042857-60042876 None:intergenic 25.0%
! GTCCATATTTGTCTTAAATA+TGG - Chr8:60044941-60044960 None:intergenic 25.0%
! GTGAATGTAAACATCAAATA+TGG - Chr8:60047268-60047287 None:intergenic 25.0%
! GTTCTACTTAAAAATTGGTA+GGG - Chr8:60043662-60043681 None:intergenic 25.0%
! TAAAAATGGTATAATCCTTG+TGG - Chr8:60043798-60043817 None:intergenic 25.0%
! TACAAAAATAAGTGAGCTAA+GGG + Chr8:60047294-60047313 MsG0880045495.01.T01:intron 25.0%
! TCAACCAACTCAAATATATA+TGG - Chr8:60047560-60047579 None:intergenic 25.0%
! TCACACCTTATTATTATTGA+TGG + Chr8:60047623-60047642 MsG0880045495.01.T01:three_prime_UTR 25.0%
! TCATACTCAACAAAACTTTA+TGG - Chr8:60044264-60044283 None:intergenic 25.0%
! TGTTCTACTTAAAAATTGGT+AGG - Chr8:60043663-60043682 None:intergenic 25.0%
! TTACAAAAATAAGTGAGCTA+AGG + Chr8:60047293-60047312 MsG0880045495.01.T01:intron 25.0%
!! AAAAATCTTTTTGACAATGG+TGG - Chr8:60046205-60046224 None:intergenic 25.0%
!! AACTTTCTTTTAGACACTAT+CGG + Chr8:60045414-60045433 MsG0880045495.01.T01:intron 25.0%
!! AATTTTCCCCAGAATATTAA+TGG - Chr8:60045829-60045848 None:intergenic 25.0%
!! AGTGAACAATTTTATATGAG+AGG + Chr8:60042302-60042321 MsG0880045495.01.T01:intron 25.0%
!! ATTCAAAAGTATATACTCCT+TGG + Chr8:60047067-60047086 MsG0880045495.01.T01:intron 25.0%
!! ATTGTACTTTCTGATTTTGT+TGG + Chr8:60043700-60043719 MsG0880045495.01.T01:intron 25.0%
!! ATTGTTTTCTTGGCATTTTA+TGG + Chr8:60044899-60044918 MsG0880045495.01.T01:intron 25.0%
!! ATTTAAGACAAATATGGACA+TGG + Chr8:60044942-60044961 MsG0880045495.01.T01:intron 25.0%
!! GATTTGATTATTCATTTTGG+AGG + Chr8:60042546-60042565 MsG0880045495.01.T01:intron 25.0%
!! GTCAAAAATCTTTTTGACAA+TGG - Chr8:60046208-60046227 None:intergenic 25.0%
!! TATAGAGGATATATTTTTCG+GGG - Chr8:60045684-60045703 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - Chr8:60042931-60042950 None:intergenic 25.0%
!! TTAATATTCTGGGGAAAATT+CGG + Chr8:60045829-60045848 MsG0880045495.01.T01:CDS 25.0%
!! TTTCCTTCCTATTTTGTATA+AGG + Chr8:60045549-60045568 MsG0880045495.01.T01:intron 25.0%
!! TTTTACTAGAATTTGTGAAG+TGG + Chr8:60043820-60043839 MsG0880045495.01.T01:intron 25.0%
!! TTTTGTGAATTATGTATGGT+TGG - Chr8:60041651-60041670 None:intergenic 25.0%
!! TTTTTACTGTTTACATGTCA+TGG + Chr8:60041972-60041991 MsG0880045495.01.T01:intron 25.0%
!!! AGAGTTTTGTGAATTATGTA+TGG - Chr8:60041655-60041674 None:intergenic 25.0%
!!! CATTTTTTTCATTTGCTAAC+TGG - Chr8:60046810-60046829 None:intergenic 25.0%
!!! GTATTTTGGTCAATTTGTTT+GGG - Chr8:60041346-60041365 None:intergenic 25.0%
!!! GTTAATCCATTGATTCATTT+AGG + Chr8:60046125-60046144 MsG0880045495.01.T01:intron 25.0%
!!! TAGTTTTTTAAAAATGCGAG+TGG + Chr8:60047164-60047183 MsG0880045495.01.T01:intron 25.0%
!!! TCCTTTTTTACTTTGGTTTT+AGG + Chr8:60047415-60047434 MsG0880045495.01.T01:intron 25.0%
AAAAAACTGCATAAAGGACA+TGG - Chr8:60044673-60044692 None:intergenic 30.0%
AACAAACTCACTATGTACTT+TGG - Chr8:60047444-60047463 None:intergenic 30.0%
AAGATAGAAGAGAGAGAAAA+TGG + Chr8:60043549-60043568 MsG0880045495.01.T01:intron 30.0%
AATGAAACAATTTCCGCTTT+AGG - Chr8:60046156-60046175 None:intergenic 30.0%
ACGAGTAAGTATATGAGAAT+CGG + Chr8:60041185-60041204 MsG0880045495.01.T01:intron 30.0%
AGCAGAAATATCCAATATAG+AGG - Chr8:60045699-60045718 None:intergenic 30.0%
AGTAAGTATATGGAAACTGA+AGG - Chr8:60046553-60046572 None:intergenic 30.0%
ATATATATGGGATGAAATCG+TGG - Chr8:60047547-60047566 None:intergenic 30.0%
ATGAAACAATTTCCGCTTTA+GGG - Chr8:60046155-60046174 None:intergenic 30.0%
ATGCATGTAGTAGTTTGAAA+AGG - Chr8:60042893-60042912 None:intergenic 30.0%
ATTCAAGAATCCATTGTATG+TGG + Chr8:60046969-60046988 MsG0880045495.01.T01:CDS 30.0%
CATAGCAAAAAACTGCATAA+AGG - Chr8:60044679-60044698 None:intergenic 30.0%
CATCCCATATATATTTGAGT+TGG + Chr8:60047553-60047572 MsG0880045495.01.T01:three_prime_UTR 30.0%
GAATGCAGAAGTTGTTTATT+TGG - Chr8:60042369-60042388 None:intergenic 30.0%
GGGACGAAAATAAAATCAAA+TGG - Chr8:60042858-60042877 None:intergenic 30.0%
GTGAAAACAAAGTAAAGAGA+TGG - Chr8:60045885-60045904 None:intergenic 30.0%
TAATAGTTTATCAGCCAACA+TGG - Chr8:60043864-60043883 None:intergenic 30.0%
TATGATAGATCGATCAATAC+TGG - Chr8:60045638-60045657 None:intergenic 30.0%
TCTATTAGGAGCAAAATCAA+TGG - Chr8:60045203-60045222 None:intergenic 30.0%
TGAAAAGGGGTTTACATTTA+GGG - Chr8:60042878-60042897 None:intergenic 30.0%
TGCATGTAGTAGTTTGAAAA+GGG - Chr8:60042892-60042911 None:intergenic 30.0%
TTGAAAAGGGGTTTACATTT+AGG - Chr8:60042879-60042898 None:intergenic 30.0%
TTTCTTTCGAAGAGAACAAT+TGG - Chr8:60045911-60045930 None:intergenic 30.0%
TTTGTTAAAAGGAGTTGTCA+TGG + Chr8:60047360-60047379 MsG0880045495.01.T01:intron 30.0%
! AATGAGAGAAACACTTTTCA+TGG + Chr8:60045045-60045064 MsG0880045495.01.T01:intron 30.0%
! ACATACAATGGATTCTTGAA+TGG - Chr8:60046970-60046989 None:intergenic 30.0%
! AGATTTTTGACACAATGAGT+CGG + Chr8:60046217-60046236 MsG0880045495.01.T01:intron 30.0%
! ATTTTTGCACTTCATGACAA+CGG + Chr8:60044725-60044744 MsG0880045495.01.T01:intron 30.0%
! GTAGTGTGCAAAGTATTAAT+TGG + Chr8:60043311-60043330 MsG0880045495.01.T01:intron 30.0%
! TAATATTCTGGGGAAAATTC+GGG + Chr8:60045830-60045849 MsG0880045495.01.T01:CDS 30.0%
! TGTGACCAAACCAAAATTTT+TGG + Chr8:60043613-60043632 MsG0880045495.01.T01:intron 30.0%
! TGTGCAAAGTATTAATTGGA+GGG + Chr8:60043315-60043334 MsG0880045495.01.T01:intron 30.0%
! TTACATCCAACAAGAGTTTT+GGG - Chr8:60046055-60046074 None:intergenic 30.0%
! TTCCTATTTTGTATAAGGCT+CGG + Chr8:60045554-60045573 MsG0880045495.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr8:60043180-60043199 None:intergenic 30.0%
!! ATAGAGGATATATTTTTCGG+GGG - Chr8:60045683-60045702 None:intergenic 30.0%
!! CTGATTTTGTTGGTAAAACA+GGG + Chr8:60043710-60043729 MsG0880045495.01.T01:intron 30.0%
!! GGGAGTACTTGATAAATATT+TGG + Chr8:60043439-60043458 MsG0880045495.01.T01:intron 30.0%
!! TCTGATTTTGTTGGTAAAAC+AGG + Chr8:60043709-60043728 MsG0880045495.01.T01:intron 30.0%
!! TTAATTTCTTTGTTGGTAGC+TGG + Chr8:60044995-60045014 MsG0880045495.01.T01:intron 30.0%
!! TTTTTGGTCAAGTAGTCTAT+TGG + Chr8:60042732-60042751 MsG0880045495.01.T01:intron 30.0%
!!! ATGTGGGGGTATTTAATTTT+TGG + Chr8:60041771-60041790 MsG0880045495.01.T01:intron 30.0%
!!! GGTATTTTGGTCAATTTGTT+TGG - Chr8:60041347-60041366 None:intergenic 30.0%
!!! TGTGGGGGTATTTAATTTTT+GGG + Chr8:60041772-60041791 MsG0880045495.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr8:60043181-60043200 MsG0880045495.01.T01:intron 30.0%
AAACGTGAGTTAACTCATGT+TGG - Chr8:60041371-60041390 None:intergenic 35.0%
AAATGGTATAATCCTTGTGG+AGG - Chr8:60043795-60043814 None:intergenic 35.0%
AACGTGAGTTAACTCATGTT+GGG - Chr8:60041370-60041389 None:intergenic 35.0%
AACTAAGTGCAAAGCTGTAT+AGG + Chr8:60041501-60041520 MsG0880045495.01.T01:intron 35.0%
AAGCTGCTCTCTGATAAAAA+AGG - Chr8:60041742-60041761 None:intergenic 35.0%
AAGTATATGAGAATCGGGTA+TGG + Chr8:60041191-60041210 MsG0880045495.01.T01:intron 35.0%
ACTGCATTATAGTTCAACAG+GGG + Chr8:60042032-60042051 MsG0880045495.01.T01:intron 35.0%
ACTTGTGTGTGAGCTTATAA+TGG + Chr8:60042664-60042683 MsG0880045495.01.T01:intron 35.0%
AGACAAATATGGACATGGTT+AGG + Chr8:60044947-60044966 MsG0880045495.01.T01:intron 35.0%
AGACAGATATCTATAAGTGG+TGG + Chr8:60045752-60045771 MsG0880045495.01.T01:intron 35.0%
AGTATATGAGAATCGGGTAT+GGG + Chr8:60041192-60041211 MsG0880045495.01.T01:intron 35.0%
AGTGTAAGTTAACTCACGTT+AGG + Chr8:60042225-60042244 MsG0880045495.01.T01:intron 35.0%
ATGTATGGAAAACACCAACA+CGG - Chr8:60042439-60042458 None:intergenic 35.0%
ATTAGGAGCAAAATCAATGG+TGG - Chr8:60045200-60045219 None:intergenic 35.0%
ATTATAAGCTCACACACAAG+TGG - Chr8:60042665-60042684 None:intergenic 35.0%
CACTGCATTATAGTTCAACA+GGG + Chr8:60042031-60042050 MsG0880045495.01.T01:intron 35.0%
CATACCACTATTGGATAAAG+AGG + Chr8:60046261-60046280 MsG0880045495.01.T01:intron 35.0%
CATTAATCATGATAAGCGCT+AGG - Chr8:60041262-60041281 None:intergenic 35.0%
CGAGTAAGTATATGAGAATC+GGG + Chr8:60041186-60041205 MsG0880045495.01.T01:intron 35.0%
CGTAGACAGATATCTATAAG+TGG + Chr8:60045749-60045768 MsG0880045495.01.T01:intron 35.0%
CTATCCTCTTTATCCAATAG+TGG - Chr8:60046268-60046287 None:intergenic 35.0%
GAAGTGCAAAAATGCCAAAT+GGG - Chr8:60044718-60044737 None:intergenic 35.0%
GAGGATTCAAATGGTTGAAA+TGG - Chr8:60043776-60043795 None:intergenic 35.0%
GATAGTTGCATTATAGTACC+CGG + Chr8:60045019-60045038 MsG0880045495.01.T01:intron 35.0%
GCATGTAGTAGTTTGAAAAG+GGG - Chr8:60042891-60042910 None:intergenic 35.0%
GGCGAGAAGAAAAATATGTA+TGG - Chr8:60042454-60042473 None:intergenic 35.0%
GGTAATTTCTATACCTACCA+AGG + Chr8:60043460-60043479 MsG0880045495.01.T01:intron 35.0%
GTAATGAGTGCCTACATTAA+GGG + Chr8:60043082-60043101 MsG0880045495.01.T01:intron 35.0%
TCATGTACTCATACCACTAT+TGG + Chr8:60046252-60046271 MsG0880045495.01.T01:intron 35.0%
TCTTATTGTATGCTTGTCCT+TGG - Chr8:60046311-60046330 None:intergenic 35.0%
TGAAGTGCAAAAATGCCAAA+TGG - Chr8:60044719-60044738 None:intergenic 35.0%
TGGTACAGGAGATCTATAAA+AGG - Chr8:60046950-60046969 None:intergenic 35.0%
TGTGACCAAACCAAAATTCT+TGG - Chr8:60043509-60043528 None:intergenic 35.0%
TTATTTGACGGAATCAAGAG+AGG + Chr8:60044152-60044171 MsG0880045495.01.T01:intron 35.0%
TTGAACTATAATGCAGTGGT+TGG - Chr8:60042029-60042048 None:intergenic 35.0%
TTGCATGTCTCCCAAAAAAT+GGG - Chr8:60042058-60042077 None:intergenic 35.0%
! AATGGATTCTTGAATGGTAC+AGG - Chr8:60046964-60046983 None:intergenic 35.0%
! AGAACTCGAGCTTTAACAAA+TGG - Chr8:60044582-60044601 None:intergenic 35.0%
! AGGATTTGTTCGAATAGCAA+TGG + Chr8:60045264-60045283 MsG0880045495.01.T01:intron 35.0%
! GAAACACTTTTCATGGAACA+TGG + Chr8:60045052-60045071 MsG0880045495.01.T01:intron 35.0%
! GAGCCTTATACAAAATAGGA+AGG - Chr8:60045555-60045574 None:intergenic 35.0%
! GAGGTAATGGTGTGTAATTA+AGG + Chr8:60044171-60044190 MsG0880045495.01.T01:intron 35.0%
! GGAATTTTCTCAACCTGAAT+TGG - Chr8:60047006-60047025 None:intergenic 35.0%
! GGGAGTGATACATTTTGTAT+GGG - Chr8:60041326-60041345 None:intergenic 35.0%
! GTGTGCAAAGTATTAATTGG+AGG + Chr8:60043314-60043333 MsG0880045495.01.T01:intron 35.0%
! GTTACATCCAACAAGAGTTT+TGG - Chr8:60046056-60046075 None:intergenic 35.0%
! TGGGAGTGATACATTTTGTA+TGG - Chr8:60041327-60041346 None:intergenic 35.0%
! TTTCTTGGCATTTTATGGAC+AGG + Chr8:60044904-60044923 MsG0880045495.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr8:60043415-60043434 MsG0880045495.01.T01:intron 35.0%
!! TATTGGGTTAGCCTCTTAAT+TGG + Chr8:60046753-60046772 MsG0880045495.01.T01:intron 35.0%
!!! CAAACCAAAATTTTTGGTCC+TGG + Chr8:60043619-60043638 MsG0880045495.01.T01:intron 35.0%
!!! CAGGACCAAAAATTTTGGTT+TGG - Chr8:60043621-60043640 None:intergenic 35.0%
AAAATGTTAACGAGTGCCTC+CGG - Chr8:60041943-60041962 None:intergenic 40.0%
AAAGCAGAAAACCGGAACAA+GGG - Chr8:60045302-60045321 None:intergenic 40.0%
AAATGCCGAAATTGTTAGGC+CGG + Chr8:60042613-60042632 MsG0880045495.01.T01:intron 40.0%
AACCATTTGAATCCTCCACA+AGG + Chr8:60043780-60043799 MsG0880045495.01.T01:intron 40.0%
AACGCGAGTTAACTCATGTT+GGG - Chr8:60042165-60042184 None:intergenic 40.0%
AAGTGTTTCTCTCATTCCAC+CGG - Chr8:60045041-60045060 None:intergenic 40.0%
AATCCATTGTATGTGGTGGT+GGG + Chr8:60046976-60046995 MsG0880045495.01.T01:CDS 40.0%
ACGTGAGTTAACTCATGTTG+GGG - Chr8:60041369-60041388 None:intergenic 40.0%
AGAGAAAATGGAGAAGAGAG+AGG + Chr8:60043561-60043580 MsG0880045495.01.T01:intron 40.0%
AGTGTGAGCTAAAAGTCTCA+CGG - Chr8:60046078-60046097 None:intergenic 40.0%
AGTTAACTCATGTTGGGGTT+CGG - Chr8:60041454-60041473 None:intergenic 40.0%
ATCCTTGTGGAGGATTCAAA+TGG - Chr8:60043785-60043804 None:intergenic 40.0%
ATTGGATAAAGAGGATAGCG+CGG + Chr8:60046270-60046289 MsG0880045495.01.T01:intron 40.0%
CAAACCAAAATTCTTGGTCC+TGG - Chr8:60043503-60043522 None:intergenic 40.0%
CAACATGAGTTAACTCACGT+TGG + Chr8:60041369-60041388 MsG0880045495.01.T01:intron 40.0%
CAACGTGAGTTAAATGGTCA+GGG + Chr8:60042115-60042134 MsG0880045495.01.T01:intron 40.0%
CAACGTGAGTTAACTCATGT+TGG - Chr8:60041461-60041480 None:intergenic 40.0%
CAAGAATCCATTGTATGTGG+TGG + Chr8:60046972-60046991 MsG0880045495.01.T01:CDS 40.0%
CCACTGCATTATAGTTCAAC+AGG + Chr8:60042030-60042049 MsG0880045495.01.T01:intron 40.0%
CCTGTTGAACTATAATGCAG+TGG - Chr8:60042033-60042052 None:intergenic 40.0%
CTGACCATTTAACTCACGTT+GGG - Chr8:60042116-60042135 None:intergenic 40.0%
CTTGCATGTCTCCCAAAAAA+TGG - Chr8:60042059-60042078 None:intergenic 40.0%
GAAAACACCAACACGGTATT+AGG - Chr8:60042432-60042451 None:intergenic 40.0%
GGCAAAATGCCGAAATTGTT+AGG + Chr8:60042609-60042628 MsG0880045495.01.T01:intron 40.0%
GGCATGCCTAAATGAATCAA+TGG - Chr8:60046134-60046153 None:intergenic 40.0%
GGTAATGAGTGCCTACATTA+AGG + Chr8:60043081-60043100 MsG0880045495.01.T01:intron 40.0%
GTATATGAGAATCGGGTATG+GGG + Chr8:60041193-60041212 MsG0880045495.01.T01:intron 40.0%
GTCGCTCAAAACATCAACAA+AGG - Chr8:60045612-60045631 None:intergenic 40.0%
GTTCAATTTCTCATCCCCAT+TGG + Chr8:60041148-60041167 MsG0880045495.01.T01:CDS 40.0%
GTTCGAATAGCAATGGAGAT+GGG + Chr8:60045271-60045290 MsG0880045495.01.T01:intron 40.0%
TATCGACCCAAAACTCTTGT+TGG + Chr8:60046046-60046065 MsG0880045495.01.T01:intron 40.0%
TCCATAAGTCCTAACTCAAC+TGG + Chr8:60042588-60042607 MsG0880045495.01.T01:intron 40.0%
TGGGTGCTTAGATATAGAGA+CGG - Chr8:60042838-60042857 None:intergenic 40.0%
TGTTCGAATAGCAATGGAGA+TGG + Chr8:60045270-60045289 MsG0880045495.01.T01:intron 40.0%
TTAACCAGTGCTTCAGACAT+TGG + Chr8:60041800-60041819 MsG0880045495.01.T01:intron 40.0%
TTACCCTACCCATATCCAAT+GGG - Chr8:60041166-60041185 None:intergenic 40.0%
TTCTCATCCCCATTGGATAT+GGG + Chr8:60041155-60041174 MsG0880045495.01.T01:CDS 40.0%
TTTCATGGAACATGGTTGTG+AGG + Chr8:60045060-60045079 MsG0880045495.01.T01:intron 40.0%
TTTCTCATCCCCATTGGATA+TGG + Chr8:60041154-60041173 MsG0880045495.01.T01:CDS 40.0%
! AGTGCTTCAGACATTGGTTA+AGG + Chr8:60041806-60041825 MsG0880045495.01.T01:intron 40.0%
! GTCCGAGCCTTATACAAAAT+AGG - Chr8:60045559-60045578 None:intergenic 40.0%
! TATAAGTGGTGGAAAGCTTC+TGG + Chr8:60045763-60045782 MsG0880045495.01.T01:CDS 40.0%
! TGGACCAGGACCAAAAATTT+TGG - Chr8:60043626-60043645 None:intergenic 40.0%
! TTAACCAATGTCTGAAGCAC+TGG - Chr8:60041807-60041826 None:intergenic 40.0%
! TTTTGTATAAGGCTCGGACT+CGG + Chr8:60045560-60045579 MsG0880045495.01.T01:intron 40.0%
!! TCTTTTTGACAATGGTGGTG+AGG - Chr8:60046200-60046219 None:intergenic 40.0%
!! TTTTTGGGAGACATGCAAGA+TGG + Chr8:60042060-60042079 MsG0880045495.01.T01:intron 40.0%
!!! AACTCATGTTGGGGGTATTT+TGG - Chr8:60041360-60041379 None:intergenic 40.0%
!!! CAGGACCAAGAATTTTGGTT+TGG + Chr8:60043501-60043520 MsG0880045495.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr8:60043419-60043438 MsG0880045495.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr8:60043438-60043419 None:intergenic 40.0%
AAATGTTAACGAGTGCCTCC+GGG - Chr8:60041942-60041961 None:intergenic 45.0%
AAGCAGAAAACCGGAACAAG+GGG - Chr8:60045301-60045320 None:intergenic 45.0%
ACCAAGGAGAAACACTTGTG+TGG + Chr8:60043476-60043495 MsG0880045495.01.T01:intron 45.0%
ACCTGACCAAAGCAGAAAAC+CGG - Chr8:60045310-60045329 None:intergenic 45.0%
AGACACTATCGGACACTATG+TGG + Chr8:60045425-60045444 MsG0880045495.01.T01:intron 45.0%
AGTCGCGTTGAGCTTATCTT+TGG - Chr8:60044532-60044551 None:intergenic 45.0%
AGTGTTTCTCTCATTCCACC+GGG - Chr8:60045040-60045059 None:intergenic 45.0%
AGTTGCATTATAGTACCCGG+TGG + Chr8:60045022-60045041 MsG0880045495.01.T01:intron 45.0%
ATAAGCTCACACACAAGTGG+AGG - Chr8:60042662-60042681 None:intergenic 45.0%
ATCATGATAAGCGCTAGGCA+TGG - Chr8:60041257-60041276 None:intergenic 45.0%
ATCCCCATTGGATATGGGTA+GGG + Chr8:60041160-60041179 MsG0880045495.01.T01:CDS 45.0%
ATGGTCAGGGATCAATGAAG+TGG + Chr8:60042079-60042098 MsG0880045495.01.T01:intron 45.0%
CAAAGCAGAAAACCGGAACA+AGG - Chr8:60045303-60045322 None:intergenic 45.0%
CAAATGAACGGTTTCACACG+AGG + Chr8:60046522-60046541 MsG0880045495.01.T01:intron 45.0%
CAACATGAGTTAACTCGCGT+TGG + Chr8:60042164-60042183 MsG0880045495.01.T01:intron 45.0%
CAACGCGAGTTAACTCATGT+TGG - Chr8:60042166-60042185 None:intergenic 45.0%
CAACTCTCCTAATACCGTGT+TGG + Chr8:60042422-60042441 MsG0880045495.01.T01:intron 45.0%
CACAAGTGTTTCTCCTTGGT+AGG - Chr8:60043476-60043495 None:intergenic 45.0%
CATTTAGGCATGCCCTAAAG+CGG + Chr8:60046140-60046159 MsG0880045495.01.T01:intron 45.0%
CCAAATGGGAAGACTGAATG+TGG - Chr8:60044704-60044723 None:intergenic 45.0%
CCAACGTGAGTTAAATGGTC+AGG + Chr8:60042114-60042133 MsG0880045495.01.T01:intron 45.0%
CCACATTCAGTCTTCCCATT+TGG + Chr8:60044701-60044720 MsG0880045495.01.T01:intron 45.0%
CCTGACCATTTAACTCACGT+TGG - Chr8:60042117-60042136 None:intergenic 45.0%
CGTGAGTTAACTCATGTTGG+GGG - Chr8:60041368-60041387 None:intergenic 45.0%
CTAGAATTTGTGAAGTGGCG+TGG + Chr8:60043825-60043844 MsG0880045495.01.T01:intron 45.0%
CTCGTGTGAAACCGTTCATT+TGG - Chr8:60046524-60046543 None:intergenic 45.0%
GAATCCATTGTATGTGGTGG+TGG + Chr8:60046975-60046994 MsG0880045495.01.T01:CDS 45.0%
GACATCCGGCCTAACAATTT+CGG - Chr8:60042621-60042640 None:intergenic 45.0%
GACGGAATCAAGAGAGGTAA+TGG + Chr8:60044158-60044177 MsG0880045495.01.T01:intron 45.0%
GAGAAAATCTTGTGTGGACC+AGG - Chr8:60043640-60043659 None:intergenic 45.0%
GATTTAATTCACGCTCACGC+TGG + Chr8:60041405-60041424 MsG0880045495.01.T01:intron 45.0%
GCAACCCAACGTGAGTTAAA+TGG + Chr8:60042109-60042128 MsG0880045495.01.T01:intron 45.0%
GCCAGTTGAGTTAGGACTTA+TGG - Chr8:60042592-60042611 None:intergenic 45.0%
GGGGTTATCATGTTAGACCA+AGG + Chr8:60046291-60046310 MsG0880045495.01.T01:intron 45.0%
GGTAGGGAGAAAATCTTGTG+TGG - Chr8:60043646-60043665 None:intergenic 45.0%
GTACATACCTGCTCTGATGT+TGG - Chr8:60047033-60047052 None:intergenic 45.0%
GTGCTTAGATATAGAGACGG+CGG - Chr8:60042835-60042854 None:intergenic 45.0%
GTTACCCTACCCATATCCAA+TGG - Chr8:60041167-60041186 None:intergenic 45.0%
TACCCTACCCATATCCAATG+GGG - Chr8:60041165-60041184 None:intergenic 45.0%
TCCACACAAGTGTTTCTCCT+TGG - Chr8:60043480-60043499 None:intergenic 45.0%
TGAGTGCCTACATTAAGGGA+TGG + Chr8:60043086-60043105 MsG0880045495.01.T01:intron 45.0%
TGCCTACATTAAGGGATGGA+GGG + Chr8:60043090-60043109 MsG0880045495.01.T01:intron 45.0%
TGCTTAGATATAGAGACGGC+GGG - Chr8:60042834-60042853 None:intergenic 45.0%
TGGTCAGGGATCAATGAAGT+GGG + Chr8:60042080-60042099 MsG0880045495.01.T01:intron 45.0%
TTACCCACCACCACATACAA+TGG - Chr8:60046982-60047001 None:intergenic 45.0%
TTGGATAAAGAGGATAGCGC+GGG + Chr8:60046271-60046290 MsG0880045495.01.T01:intron 45.0%
! AAACAGGGCTAGTACAAGGA+AGG + Chr8:60043725-60043744 MsG0880045495.01.T01:intron 45.0%
! CGGAGGGAGTACATAATTGT+TGG - Chr8:60043160-60043179 None:intergenic 45.0%
! CTTGTTCCGGTTTTCTGCTT+TGG + Chr8:60045301-60045320 MsG0880045495.01.T01:intron 45.0%
! GGCATTTTGCCAGTTGAGTT+AGG - Chr8:60042600-60042619 None:intergenic 45.0%
! GGTAAAACAGGGCTAGTACA+AGG + Chr8:60043721-60043740 MsG0880045495.01.T01:intron 45.0%
! TGGACCAGGACCAAGAATTT+TGG + Chr8:60043496-60043515 MsG0880045495.01.T01:intron 45.0%
!! TTTTGACAATGGTGGTGAGG+CGG - Chr8:60046197-60046216 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr8:60043418-60043437 MsG0880045495.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr8:60043437-60043418 None:intergenic 45.0%
!!! TCAACAGGGGCCCATTTTTT+GGG + Chr8:60042045-60042064 MsG0880045495.01.T01:intron 45.0%
!!! TTCAACAGGGGCCCATTTTT+TGG + Chr8:60042044-60042063 MsG0880045495.01.T01:intron 45.0%
!! ATAAATGATTAATAAAAAAA+AGG - Chr8:60044640-60044659 None:intergenic 5.0%
!!! AATACATTAAATATTTTATA+AGG - Chr8:60047651-60047670 None:intergenic 5.0%
!!! TTTATTTATTTTTTGTTAAA+AGG + Chr8:60047349-60047368 MsG0880045495.01.T01:intron 5.0%
AATGTTAACGAGTGCCTCCG+GGG - Chr8:60041941-60041960 None:intergenic 50.0%
AGCAGAAAACCGGAACAAGG+GGG - Chr8:60045300-60045319 None:intergenic 50.0%
AGCAGCTTTGCACTAGGATG+TGG + Chr8:60041754-60041773 MsG0880045495.01.T01:intron 50.0%
AGCTTTGCACTAGGATGTGG+GGG + Chr8:60041757-60041776 MsG0880045495.01.T01:intron 50.0%
AGTTTCCTTAACCAGTGCCC+CGG + Chr8:60041921-60041940 MsG0880045495.01.T01:intron 50.0%
ATAAGCGCTAGGCATGGCAA+TGG - Chr8:60041251-60041270 None:intergenic 50.0%
ATGAGAATCGGGTATGGGGA+TGG + Chr8:60041197-60041216 MsG0880045495.01.T01:intron 50.0%
CAGCTTTGCACTAGGATGTG+GGG + Chr8:60041756-60041775 MsG0880045495.01.T01:intron 50.0%
CATCCCCATTGGATATGGGT+AGG + Chr8:60041159-60041178 MsG0880045495.01.T01:CDS 50.0%
CTCCCTCCATCCCTTAATGT+AGG - Chr8:60043095-60043114 None:intergenic 50.0%
GAACGACACAAGACTCAAGC+TGG + Chr8:60047485-60047504 MsG0880045495.01.T01:CDS 50.0%
GAATTTGTGAAGTGGCGTGG+AGG + Chr8:60043828-60043847 MsG0880045495.01.T01:intron 50.0%
GAGAAACACTTGTGTGGACC+AGG + Chr8:60043482-60043501 MsG0880045495.01.T01:intron 50.0%
GCAGCTTTGCACTAGGATGT+GGG + Chr8:60041755-60041774 MsG0880045495.01.T01:intron 50.0%
GGAGACATGCAAGATGGTCA+GGG + Chr8:60042066-60042085 MsG0880045495.01.T01:intron 50.0%
GGGGTTCGAATCATGACATC+CGG - Chr8:60042635-60042654 None:intergenic 50.0%
GTGCCTACATTAAGGGATGG+AGG + Chr8:60043089-60043108 MsG0880045495.01.T01:intron 50.0%
TAAGCGCTAGGCATGGCAAT+GGG - Chr8:60041250-60041269 None:intergenic 50.0%
TCAGACGTCGATACCTGCTT+TGG - Chr8:60045459-60045478 None:intergenic 50.0%
TCAGAGAGCAGCTTTGCACT+AGG + Chr8:60041748-60041767 MsG0880045495.01.T01:intron 50.0%
TCCAGAACCAACATCAGAGC+AGG + Chr8:60047023-60047042 MsG0880045495.01.T01:CDS 50.0%
TGAGAATCGGGTATGGGGAT+GGG + Chr8:60041198-60041217 MsG0880045495.01.T01:intron 50.0%
TGGATAAAGAGGATAGCGCG+GGG + Chr8:60046272-60046291 MsG0880045495.01.T01:intron 50.0%
TGTGGATACCTGACCAAAGC+AGG + Chr8:60045443-60045462 MsG0880045495.01.T01:intron 50.0%
! AGGGCTAGTACAAGGAAGGT+TGG + Chr8:60043729-60043748 MsG0880045495.01.T01:intron 50.0%
! TCACACACAAGTGGAGGTAC+TGG - Chr8:60042656-60042675 None:intergenic 50.0%
! TCCGGTTTTCTGCTTTGGTC+AGG + Chr8:60045306-60045325 MsG0880045495.01.T01:intron 50.0%
!! ACACACAAGTGGAGGTACTG+GGG - Chr8:60042654-60042673 None:intergenic 50.0%
!! ACCTGCTCTGATGTTGGTTC+TGG - Chr8:60047027-60047046 None:intergenic 50.0%
!! CACACACAAGTGGAGGTACT+GGG - Chr8:60042655-60042674 None:intergenic 50.0%
!! GGTGGTGGGTAAACCAATTC+AGG + Chr8:60046990-60047009 MsG0880045495.01.T01:CDS 50.0%
AAGCGCTAGGCATGGCAATG+GGG - Chr8:60041249-60041268 None:intergenic 55.0%
CGTCGATACCTGCTTTGGTC+AGG - Chr8:60045454-60045473 None:intergenic 55.0%
GAGAATCGGGTATGGGGATG+GGG + Chr8:60041199-60041218 MsG0880045495.01.T01:intron 55.0%
GGGAGACATGCAAGATGGTC+AGG + Chr8:60042065-60042084 MsG0880045495.01.T01:intron 55.0%
TTGTGAAGTGGCGTGGAGGA+TGG + Chr8:60043832-60043851 MsG0880045495.01.T01:intron 55.0%
AAGTGGCGTGGAGGATGGAG+GGG + Chr8:60043837-60043856 MsG0880045495.01.T01:intron 60.0%
ATACCCGAATCCGTCGGGGA+CGG + Chr8:60041118-60041137 MsG0880045495.01.T01:CDS 60.0%
GAAGTGGCGTGGAGGATGGA+GGG + Chr8:60043836-60043855 MsG0880045495.01.T01:intron 60.0%
GAGGATGGAGGGGACCATGT+TGG + Chr8:60043847-60043866 MsG0880045495.01.T01:intron 60.0%
GATGGGTCACCCCCTTGTTC+CGG + Chr8:60045288-60045307 MsG0880045495.01.T01:intron 60.0%
TGAAGTGGCGTGGAGGATGG+AGG + Chr8:60043835-60043854 MsG0880045495.01.T01:intron 60.0%
TTCCTTAACCAGTGCCCCGG+AGG + Chr8:60041924-60041943 MsG0880045495.01.T01:intron 60.0%
AACCTCATCCCCGTCCCCGA+CGG - Chr8:60041131-60041150 None:intergenic 65.0%
CGCTAGGCATGGCAATGGGG+CGG - Chr8:60041246-60041265 None:intergenic 65.0%
CGGGGATACCCGAATCCGTC+GGG + Chr8:60041113-60041132 MsG0880045495.01.T01:CDS 65.0%
CTAGGCATGGCAATGGGGCG+GGG - Chr8:60041244-60041263 None:intergenic 65.0%
GCGGGGATACCCGAATCCGT+CGG + Chr8:60041112-60041131 MsG0880045495.01.T01:CDS 65.0%
GCTAGGCATGGCAATGGGGC+GGG - Chr8:60041245-60041264 None:intergenic 65.0%
GGGGATACCCGAATCCGTCG+GGG + Chr8:60041114-60041133 MsG0880045495.01.T01:CDS 65.0%
TACCCGAATCCGTCGGGGAC+GGG + Chr8:60041119-60041138 MsG0880045495.01.T01:CDS 65.0%
! ATCCCCGTCCCCGACGGATT+CGG - Chr8:60041125-60041144 None:intergenic 65.0%
!! TGCCTCCGGGGCACTGGTTA+AGG - Chr8:60041929-60041948 None:intergenic 65.0%
AACGAGTGCCTCCGGGGCAC+TGG - Chr8:60041935-60041954 None:intergenic 70.0%
ACCCGAATCCGTCGGGGACG+GGG + Chr8:60041120-60041139 MsG0880045495.01.T01:CDS 70.0%
ATCCGTCGGGGACGGGGATG+AGG + Chr8:60041126-60041145 MsG0880045495.01.T01:CDS 70.0%
CATGGCAATGGGGCGGGGTG+GGG - Chr8:60041239-60041258 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG - Chr8:60041240-60041259 None:intergenic 70.0%
! TCCCCGTCCCCGACGGATTC+GGG - Chr8:60041124-60041143 None:intergenic 70.0%
CAATGGGGCGGGGTGGGGAC+GGG - Chr8:60041234-60041253 None:intergenic 75.0%
GCAATGGGGCGGGGTGGGGA+CGG - Chr8:60041235-60041254 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG - Chr8:60041241-60041260 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 60041107 60047670 60041107 ID=MsG0880045495.01;Name=MsG0880045495.01
Chr8 mRNA 60041107 60047670 60041107 ID=MsG0880045495.01.T01;Parent=MsG0880045495.01;Name=MsG0880045495.01.T01;_AED=0.47;_eAED=0.55;_QI=0|0.66|0.5|1|0|0|4|132|121
Chr8 exon 60041107 60041188 60041107 ID=MsG0880045495.01.T01:exon:23079;Parent=MsG0880045495.01.T01
Chr8 exon 60045758 60045851 60045758 ID=MsG0880045495.01.T01:exon:23080;Parent=MsG0880045495.01.T01
Chr8 exon 60046957 60047044 60046957 ID=MsG0880045495.01.T01:exon:23081;Parent=MsG0880045495.01.T01
Chr8 exon 60047437 60047670 60047437 ID=MsG0880045495.01.T01:exon:23082;Parent=MsG0880045495.01.T01
Chr8 CDS 60041107 60041188 60041107 ID=MsG0880045495.01.T01:cds;Parent=MsG0880045495.01.T01
Chr8 CDS 60045758 60045851 60045758 ID=MsG0880045495.01.T01:cds;Parent=MsG0880045495.01.T01
Chr8 CDS 60046957 60047044 60046957 ID=MsG0880045495.01.T01:cds;Parent=MsG0880045495.01.T01
Chr8 CDS 60047437 60047538 60047437 ID=MsG0880045495.01.T01:cds;Parent=MsG0880045495.01.T01
Chr8 three_prime_UTR 60047539 60047670 60047539 ID=MsG0880045495.01.T01:three_prime_utr;Parent=MsG0880045495.01.T01
Gene Sequence

>MsG0880045495.01.T01

ATGGGGCGGGGATACCCGAATCCGTCGGGGACGGGGATGAGGTTCAATTTCTCATCCCCATTGGATATGGGTAGGGTAACGAATATCTATAAGTGGTGGAAAGCTTCTGGTAAGTTAATTCAAAATCTTGCAAGGTCTATGAAGATCTTTCCATTAATATTCTGGGGAAAATTCGGATCTCCTGTACCATTCAAGAATCCATTGTATGTGGTGGTGGGTAAACCAATTCAGGTTGAGAAAATTCCAGAACCAACATCAGAGCAGGTTGCCAAAGTACATAGTGAGTTTGTTGAAGCACTTCAAGATCTTTTTGAACGACACAAGACTCAAGCTGGATGTACAAACCTTAAGTTGAAAATTGTTTGA
Protein sequence

>MsG0880045495.01.T01

MGRGYPNPSGTGMRFNFSSPLDMGRVTNIYKWWKASGKLIQNLARSMKIFPLIFWGKFGSPVPFKNPLYVVVGKPIQVEKIPEPTSEQVAKVHSEFVEALQDLFERHKTQAGCTNLKLKIV*