Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008391.01.T01 | XP_013463540.1 | 93.81 | 210 | 13 | 0 | 1 | 210 | 1 | 210 | 4.74E-140 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008391.01.T01 | Q9ZRA4 | 74.038 | 208 | 53 | 1 | 3 | 209 | 1 | 208 | 3.53E-107 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008391.01.T01 | A0A072VHE3 | 93.810 | 210 | 13 | 0 | 1 | 210 | 1 | 210 | 2.26e-140 | 400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0280008391.01 | 0.850569 | 1.559653e-60 | 3.068197e-57 |
| MsG0180000038.01 | MsG0280008391.01 | 0.816559 | 5.196823e-52 | 3.694454e-49 |
| MsG0180000098.01 | MsG0280008391.01 | 0.818932 | 1.514260e-52 | 1.149211e-49 |
| MsG0180000404.01 | MsG0280008391.01 | 0.852931 | 3.337785e-61 | 7.088514e-58 |
| MsG0180000632.01 | MsG0280008391.01 | 0.822204 | 2.684282e-53 | 2.231783e-50 |
| MsG0180000782.01 | MsG0280008391.01 | 0.830470 | 2.883782e-55 | 3.040909e-52 |
| MsG0180000914.01 | MsG0280008391.01 | 0.801792 | 7.617753e-49 | 3.670660e-46 |
| MsG0180001771.01 | MsG0280008391.01 | 0.821504 | 3.898446e-53 | 3.177295e-50 |
| MsG0180001892.01 | MsG0280008391.01 | 0.809609 | 1.738626e-50 | 1.025529e-47 |
| MsG0180003741.01 | MsG0280008391.01 | 0.899592 | 1.700937e-77 | 2.117536e-73 |
| MsG0180003951.01 | MsG0280008391.01 | 0.811969 | 5.364796e-51 | 3.368015e-48 |
| MsG0180004765.01 | MsG0280008391.01 | 0.840506 | 8.345542e-58 | 1.191315e-54 |
| MsG0180004975.01 | MsG0280008391.01 | 0.814873 | 1.234176e-51 | 8.378506e-49 |
| MsG0180005113.01 | MsG0280008391.01 | 0.878509 | 2.651055e-69 | 1.388180e-65 |
| MsG0180005153.01 | MsG0280008391.01 | 0.873624 | 1.273253e-67 | 5.562327e-64 |
| MsG0180005524.01 | MsG0280008391.01 | 0.810745 | 9.894101e-51 | 6.013244e-48 |
| MsG0180006017.01 | MsG0280008391.01 | 0.827253 | 1.732846e-54 | 1.663975e-51 |
| MsG0280006405.01 | MsG0280008391.01 | 0.803663 | 3.131345e-49 | 1.582634e-46 |
| MsG0280006937.01 | MsG0280008391.01 | 0.826242 | 3.020392e-54 | 2.816877e-51 |
| MsG0280006966.01 | MsG0280008391.01 | 0.835400 | 1.715341e-56 | 2.095313e-53 |
| MsG0280006967.01 | MsG0280008391.01 | 0.833346 | 5.621935e-56 | 6.457146e-53 |
| MsG0280007305.01 | MsG0280008391.01 | 0.809039 | 2.303799e-50 | 1.338279e-47 |
| MsG0280007432.01 | MsG0280008391.01 | 0.812899 | 3.360265e-51 | 2.162629e-48 |
| MsG0280007506.01 | MsG0280008391.01 | 0.816024 | 6.844262e-52 | 4.795245e-49 |
| MsG0280007547.01 | MsG0280008391.01 | 0.818705 | 1.704865e-52 | 1.285559e-49 |
| MsG0280007955.01 | MsG0280008391.01 | 0.822872 | 1.877331e-53 | 1.590860e-50 |
| MsG0280008383.01 | MsG0280008391.01 | 0.802334 | 5.894967e-49 | 2.880070e-46 |
| MsG0280008390.01 | MsG0280008391.01 | 0.936519 | 1.524619e-97 | 1.310670e-92 |
| MsG0280008391.01 | MsG0280008392.01 | 0.948424 | 9.705919e-107 | 1.813730e-101 |
| MsG0280008391.01 | MsG0280008395.01 | 0.946777 | 2.414546e-105 | 4.040055e-100 |
| MsG0280008391.01 | MsG0280008396.01 | 0.877629 | 5.391830e-69 | 2.729856e-65 |
| MsG0280008391.01 | MsG0280008397.01 | 0.911276 | 7.300164e-83 | 1.551813e-78 |
| MsG0280008391.01 | MsG0280008866.01 | 0.805817 | 1.111325e-49 | 5.937272e-47 |
| MsG0280008391.01 | MsG0280009920.01 | 0.813764 | 2.169363e-51 | 1.429240e-48 |
| MsG0280008391.01 | MsG0280010489.01 | 0.813192 | 2.898293e-51 | 1.880000e-48 |
| MsG0280008391.01 | MsG0280010778.01 | 0.821946 | 3.080548e-53 | 2.542409e-50 |
| MsG0280008391.01 | MsG0280010839.01 | 0.814799 | 1.281926e-51 | 8.685710e-49 |
| MsG0280008391.01 | MsG0280011101.01 | 0.802313 | 5.952389e-49 | 2.906701e-46 |
| MsG0280008391.01 | MsG0380011496.01 | 0.833022 | 6.770671e-56 | 7.701169e-53 |
| MsG0280008391.01 | MsG0380011501.01 | 0.817628 | 2.987533e-52 | 2.187016e-49 |
| MsG0280008391.01 | MsG0380011675.01 | 0.807117 | 5.912470e-50 | 3.265679e-47 |
| MsG0280008391.01 | MsG0380012067.01 | 0.802123 | 6.512296e-49 | 3.164494e-46 |
| MsG0280008391.01 | MsG0380012122.01 | 0.801078 | 1.066908e-48 | 5.049355e-46 |
| MsG0280008391.01 | MsG0380014115.01 | 0.813619 | 2.335604e-51 | 1.532782e-48 |
| MsG0280008391.01 | MsG0380014221.01 | 0.804943 | 1.694605e-49 | 8.852741e-47 |
| MsG0280008391.01 | MsG0380014495.01 | 0.813501 | 2.479468e-51 | 1.622016e-48 |
| MsG0280008391.01 | MsG0380014926.01 | 0.808293 | 3.326042e-50 | 1.894533e-47 |
| MsG0280008391.01 | MsG0380015366.01 | 0.800041 | 1.735643e-48 | 8.000535e-46 |
| MsG0280008391.01 | MsG0380015463.01 | 0.822495 | 2.298032e-53 | 1.926577e-50 |
| MsG0280008391.01 | MsG0380015577.01 | 0.822153 | 2.757840e-53 | 2.289564e-50 |
| MsG0280008391.01 | MsG0380015786.01 | 0.808845 | 2.534633e-50 | 1.464743e-47 |
| MsG0280008391.01 | MsG0380016126.01 | 0.803839 | 2.878320e-49 | 1.461448e-46 |
| MsG0280008391.01 | MsG0380016529.01 | 0.801400 | 9.168068e-49 | 4.373941e-46 |
| MsG0280008391.01 | MsG0480018423.01 | 0.808695 | 2.729014e-50 | 1.570831e-47 |
| MsG0280008391.01 | MsG0480018653.01 | 0.812292 | 4.561565e-51 | 2.889090e-48 |
| MsG0280008391.01 | MsG0480018909.01 | 0.831114 | 2.005607e-55 | 2.155505e-52 |
| MsG0280008391.01 | MsG0480019279.01 | 0.805948 | 1.043084e-49 | 5.591404e-47 |
| MsG0280008391.01 | MsG0480020096.01 | 0.823581 | 1.282589e-53 | 1.108828e-50 |
| MsG0280008391.01 | MsG0480020574.01 | 0.827543 | 1.476085e-54 | 1.429339e-51 |
| MsG0280008391.01 | MsG0480020788.01 | 0.803491 | 3.399636e-49 | 1.710727e-46 |
| MsG0280008391.01 | MsG0480023601.01 | 0.826868 | 2.141804e-54 | 2.033472e-51 |
| MsG0280008391.01 | MsG0480024022.01 | 0.864447 | 1.207899e-64 | 3.794111e-61 |
| MsG0280008391.01 | MsG0480024030.01 | 0.814651 | 1.382248e-51 | 9.328267e-49 |
| MsG0280008391.01 | MsG0580024443.01 | 0.801949 | 7.071252e-49 | 3.420938e-46 |
| MsG0280008391.01 | MsG0580024790.01 | -0.806993 | 6.280935e-50 | 3.458045e-47 |
| MsG0280008391.01 | MsG0580024966.01 | 0.804303 | 2.304448e-49 | 1.184081e-46 |
| MsG0280008391.01 | MsG0580025407.01 | -0.808528 | 2.963094e-50 | 1.698236e-47 |
| MsG0280008391.01 | MsG0580025449.01 | 0.805695 | 1.179158e-49 | 6.280007e-47 |
| MsG0280008391.01 | MsG0580025814.01 | 0.800003 | 1.767377e-48 | 8.138878e-46 |
| MsG0280008391.01 | MsG0580025973.01 | 0.816473 | 5.431551e-52 | 3.852251e-49 |
| MsG0280008391.01 | MsG0580025974.01 | 0.827024 | 1.966182e-54 | 1.875268e-51 |
| MsG0280008391.01 | MsG0580027925.01 | 0.846945 | 1.579144e-59 | 2.762745e-56 |
| MsG0280008391.01 | MsG0580028960.01 | 0.803036 | 4.222687e-49 | 2.100151e-46 |
| MsG0280008391.01 | MsG0580029236.01 | 0.819248 | 1.282870e-52 | 9.820106e-50 |
| MsG0280008391.01 | MsG0580029310.01 | 0.849378 | 3.359860e-60 | 6.357419e-57 |
| MsG0280008391.01 | MsG0580029406.01 | 0.838442 | 2.868295e-57 | 3.842446e-54 |
| MsG0280008391.01 | MsG0580029417.01 | 0.817736 | 2.824812e-52 | 2.074125e-49 |
| MsG0280008391.01 | MsG0580029418.01 | 0.827719 | 1.339354e-54 | 1.303634e-51 |
| MsG0280008391.01 | MsG0580029736.01 | 0.823921 | 1.067593e-53 | 9.318932e-51 |
| MsG0280008391.01 | MsG0580029941.01 | 0.803415 | 3.524645e-49 | 1.770153e-46 |
| MsG0280008391.01 | MsG0680030328.01 | 0.835275 | 1.844676e-56 | 2.244988e-53 |
| MsG0280008391.01 | MsG0680030329.01 | 0.811680 | 6.201052e-51 | 3.862848e-48 |
| MsG0280008391.01 | MsG0680030784.01 | 0.808089 | 3.675667e-50 | 2.082480e-47 |
| MsG0280008391.01 | MsG0680030880.01 | 0.804034 | 2.621368e-49 | 1.337679e-46 |
| MsG0280008391.01 | MsG0680030908.01 | 0.815084 | 1.107994e-51 | 7.565134e-49 |
| MsG0280008391.01 | MsG0680031263.01 | 0.803309 | 3.707261e-49 | 1.856745e-46 |
| MsG0280008391.01 | MsG0680031428.01 | 0.815061 | 1.121184e-51 | 7.650385e-49 |
| MsG0280008391.01 | MsG0680031431.01 | 0.835227 | 1.897491e-56 | 2.305913e-53 |
| MsG0280008391.01 | MsG0680031488.01 | 0.801781 | 7.655938e-49 | 3.688011e-46 |
| MsG0280008391.01 | MsG0680031621.01 | 0.820991 | 5.118089e-53 | 4.112913e-50 |
| MsG0280008391.01 | MsG0680031707.01 | 0.857676 | 1.388094e-62 | 3.453546e-59 |
| MsG0280008391.01 | MsG0680031959.01 | 0.838730 | 2.417731e-57 | 3.267303e-54 |
| MsG0280008391.01 | MsG0680034739.01 | 0.801247 | 9.854042e-49 | 4.683356e-46 |
| MsG0280008391.01 | MsG0680035498.01 | 0.814142 | 1.791102e-51 | 1.192200e-48 |
| MsG0280008391.01 | MsG0680035580.01 | 0.802577 | 5.252036e-49 | 2.581770e-46 |
| MsG0280008391.01 | MsG0680035658.01 | 0.807292 | 5.428718e-50 | 3.012258e-47 |
| MsG0280008391.01 | MsG0780036297.01 | 0.801187 | 1.013341e-48 | 4.808923e-46 |
| MsG0280008391.01 | MsG0780036307.01 | 0.801726 | 7.860460e-49 | 3.781114e-46 |
| MsG0280008391.01 | MsG0780036486.01 | 0.815466 | 9.113719e-52 | 6.288659e-49 |
| MsG0280008391.01 | MsG0780036593.01 | 0.809477 | 1.855667e-50 | 1.090639e-47 |
| MsG0280008391.01 | MsG0780036602.01 | 0.800154 | 1.646312e-48 | 7.610394e-46 |
| MsG0280008391.01 | MsG0780036757.01 | 0.848541 | 5.738073e-60 | 1.056548e-56 |
| MsG0280008391.01 | MsG0780036766.01 | 0.807877 | 4.077062e-50 | 2.296903e-47 |
| MsG0280008391.01 | MsG0780037341.01 | 0.807382 | 5.194681e-50 | 2.889184e-47 |
| MsG0280008391.01 | MsG0780037372.01 | 0.807706 | 4.433593e-50 | 2.486701e-47 |
| MsG0280008391.01 | MsG0780037395.01 | 0.808843 | 2.537285e-50 | 1.466183e-47 |
| MsG0280008391.01 | MsG0780037460.01 | 0.802043 | 6.766187e-49 | 3.281159e-46 |
| MsG0280008391.01 | MsG0780037492.01 | 0.806609 | 7.568657e-50 | 4.125973e-47 |
| MsG0280008391.01 | MsG0780038377.01 | 0.803076 | 4.142672e-49 | 2.062391e-46 |
| MsG0280008391.01 | MsG0780038378.01 | 0.802616 | 5.155171e-49 | 2.536765e-46 |
| MsG0280008391.01 | MsG0780040074.01 | 0.800599 | 1.336500e-48 | 6.248532e-46 |
| MsG0280008391.01 | MsG0780040430.01 | 0.827132 | 1.851650e-54 | 1.771653e-51 |
| MsG0280008391.01 | MsG0780040431.01 | 0.814457 | 1.525649e-51 | 1.024237e-48 |
| MsG0280008391.01 | MsG0780040432.01 | 0.809755 | 1.617570e-50 | 9.577970e-48 |
| MsG0280008391.01 | MsG0780040846.01 | 0.841732 | 3.976110e-58 | 5.895474e-55 |
| MsG0280008391.01 | MsG0780040966.01 | 0.833260 | 5.906476e-56 | 6.765910e-53 |
| MsG0280008391.01 | MsG0780041259.01 | 0.878960 | 1.839595e-69 | 9.795012e-66 |
| MsG0280008391.01 | MsG0780041391.01 | 0.810687 | 1.018556e-50 | 6.180727e-48 |
| MsG0280008391.01 | MsG0780041673.01 | 0.802860 | 4.590475e-49 | 2.272969e-46 |
| MsG0280008391.01 | MsG0780041698.01 | 0.847979 | 8.208026e-60 | 1.484160e-56 |
| MsG0280008391.01 | MsG0780041699.01 | 0.852600 | 4.150323e-61 | 8.717358e-58 |
| MsG0280008391.01 | MsG0880041834.01 | 0.837167 | 6.099271e-57 | 7.856864e-54 |
| MsG0280008391.01 | MsG0880041858.01 | 0.862793 | 3.940828e-64 | 1.168665e-60 |
| MsG0280008391.01 | MsG0880042442.01 | 0.816453 | 5.486851e-52 | 3.889305e-49 |
| MsG0280008391.01 | MsG0880042732.01 | 0.805960 | 1.037101e-49 | 5.561046e-47 |
| MsG0280008391.01 | MsG0880042958.01 | 0.826595 | 2.488388e-54 | 2.343984e-51 |
| MsG0280008391.01 | MsG0880043037.01 | 0.817404 | 3.355850e-52 | 2.441688e-49 |
| MsG0280008391.01 | MsG0880043157.01 | 0.803091 | 4.114034e-49 | 2.048910e-46 |
| MsG0280008391.01 | MsG0880043479.01 | 0.804591 | 2.007435e-49 | 1.039114e-46 |
| MsG0280008391.01 | MsG0880043979.01 | 0.817863 | 2.644733e-52 | 1.948618e-49 |
| MsG0280008391.01 | MsG0880044067.01 | 0.800434 | 1.444057e-48 | 6.723295e-46 |
| MsG0280008391.01 | MsG0880044704.01 | 0.847516 | 1.100561e-59 | 1.961209e-56 |
| MsG0280008391.01 | MsG0880044902.01 | 0.811187 | 7.937226e-51 | 4.880721e-48 |
| MsG0280008391.01 | MsG0880045177.01 | 0.801669 | 8.074903e-49 | 3.878764e-46 |
| MsG0280008391.01 | MsG0880045179.01 | 0.823016 | 1.738149e-53 | 1.478954e-50 |
| MsG0280008391.01 | MsG0880045495.01 | 0.812079 | 5.077962e-51 | 3.197493e-48 |
| MsG0280008391.01 | MsG0880045585.01 | 0.838532 | 2.719313e-57 | 3.652648e-54 |
| MsG0280008391.01 | MsG0880045586.01 | 0.817289 | 3.562780e-52 | 2.583942e-49 |
| MsG0280008391.01 | MsG0880045765.01 | 0.826566 | 2.528727e-54 | 2.380080e-51 |
| MsG0280008391.01 | MsG0880046457.01 | 0.812203 | 4.770791e-51 | 3.014258e-48 |
| MsG0280008391.01 | MsG0880047135.01 | 0.806798 | 6.904029e-50 | 3.782061e-47 |
| MsG0280008391.01 | MsG0880047538.01 | 0.802287 | 6.027446e-49 | 2.941314e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008391.01.T01 | MTR_2g041580 | 93.810 | 210 | 13 | 0 | 1 | 210 | 1 | 210 | 5.74e-144 | 400 |
| MsG0280008391.01.T01 | MTR_2g041570 | 94.286 | 210 | 12 | 0 | 1 | 210 | 1 | 210 | 6.20e-144 | 400 |
| MsG0280008391.01.T01 | MTR_2g041550 | 86.190 | 210 | 29 | 0 | 1 | 210 | 1 | 210 | 1.29e-129 | 363 |
| MsG0280008391.01.T01 | MTR_8g020590 | 64.423 | 208 | 74 | 0 | 3 | 210 | 1 | 208 | 3.03e-92 | 269 |
| MsG0280008391.01.T01 | MTR_8g020630 | 55.981 | 209 | 88 | 3 | 4 | 210 | 3 | 209 | 1.29e-79 | 237 |
| MsG0280008391.01.T01 | MTR_8g020650 | 56.995 | 193 | 81 | 2 | 18 | 210 | 19 | 209 | 3.22e-77 | 231 |
| MsG0280008391.01.T01 | MTR_8g020670 | 55.024 | 209 | 90 | 3 | 4 | 210 | 3 | 209 | 8.70e-77 | 229 |
| MsG0280008391.01.T01 | MTR_8g020610 | 51.442 | 208 | 95 | 2 | 7 | 210 | 2 | 207 | 4.14e-71 | 215 |
| MsG0280008391.01.T01 | MTR_2g044040 | 50.472 | 212 | 100 | 4 | 1 | 210 | 1 | 209 | 1.05e-70 | 214 |
| MsG0280008391.01.T01 | MTR_2g045100 | 51.196 | 209 | 98 | 3 | 4 | 210 | 3 | 209 | 1.67e-69 | 211 |
| MsG0280008391.01.T01 | MTR_3g019710 | 50.239 | 209 | 100 | 3 | 4 | 210 | 3 | 209 | 2.67e-67 | 206 |
| MsG0280008391.01.T01 | MTR_2g036120 | 50.481 | 208 | 99 | 3 | 4 | 209 | 3 | 208 | 1.13e-66 | 204 |
| MsG0280008391.01.T01 | MTR_3g019650 | 49.519 | 208 | 102 | 3 | 4 | 210 | 3 | 208 | 8.59e-66 | 202 |
| MsG0280008391.01.T01 | MTR_3g019680 | 49.519 | 208 | 102 | 3 | 4 | 210 | 3 | 208 | 2.58e-65 | 201 |
| MsG0280008391.01.T01 | MTR_8g020770 | 46.009 | 213 | 111 | 3 | 1 | 210 | 1 | 212 | 3.10e-62 | 193 |
| MsG0280008391.01.T01 | MTR_0284s0010 | 47.847 | 209 | 105 | 3 | 4 | 210 | 3 | 209 | 1.26e-61 | 191 |
| MsG0280008391.01.T01 | MTR_8g020750 | 46.009 | 213 | 111 | 3 | 1 | 210 | 1 | 212 | 2.99e-61 | 190 |
| MsG0280008391.01.T01 | MTR_5g031460 | 46.445 | 211 | 110 | 3 | 1 | 210 | 1 | 209 | 1.49e-60 | 188 |
| MsG0280008391.01.T01 | MTR_4g010340 | 47.596 | 208 | 106 | 3 | 3 | 210 | 1 | 205 | 2.01e-60 | 188 |
| MsG0280008391.01.T01 | MTR_7g011340 | 47.938 | 194 | 99 | 2 | 17 | 210 | 18 | 209 | 7.76e-59 | 184 |
| MsG0280008391.01.T01 | MTR_8g020760 | 45.327 | 214 | 110 | 4 | 1 | 210 | 1 | 211 | 9.76e-58 | 181 |
| MsG0280008391.01.T01 | MTR_3g073170 | 43.256 | 215 | 112 | 5 | 1 | 210 | 1 | 210 | 2.55e-57 | 180 |
| MsG0280008391.01.T01 | MTR_2g019780 | 42.396 | 217 | 113 | 5 | 1 | 210 | 1 | 212 | 4.87e-54 | 172 |
| MsG0280008391.01.T01 | MTR_3g019810 | 45.854 | 205 | 101 | 4 | 4 | 206 | 109 | 305 | 2.96e-51 | 168 |
| MsG0280008391.01.T01 | MTR_8g020763 | 41.341 | 179 | 104 | 1 | 32 | 210 | 13 | 190 | 9.79e-49 | 157 |
| MsG0280008391.01.T01 | MTR_2g031270 | 40.957 | 188 | 104 | 3 | 20 | 203 | 26 | 210 | 5.60e-42 | 141 |
| MsG0280008391.01.T01 | MTR_2g030855 | 40.426 | 188 | 105 | 3 | 20 | 203 | 25 | 209 | 6.13e-42 | 141 |
| MsG0280008391.01.T01 | MTR_1g079490 | 41.232 | 211 | 108 | 5 | 8 | 203 | 5 | 214 | 2.33e-41 | 140 |
| MsG0280008391.01.T01 | MTR_4g017050 | 40.566 | 212 | 109 | 5 | 7 | 203 | 4 | 213 | 4.20e-41 | 139 |
| MsG0280008391.01.T01 | MTR_5g046410 | 40.566 | 212 | 109 | 5 | 7 | 203 | 4 | 213 | 5.32e-41 | 139 |
| MsG0280008391.01.T01 | MTR_5g046430 | 40.566 | 212 | 109 | 5 | 7 | 203 | 4 | 213 | 5.32e-41 | 139 |
| MsG0280008391.01.T01 | MTR_4g017030 | 40.566 | 212 | 109 | 5 | 7 | 203 | 4 | 213 | 5.32e-41 | 139 |
| MsG0280008391.01.T01 | MTR_6g005310 | 39.720 | 214 | 114 | 5 | 3 | 203 | 1 | 212 | 9.43e-40 | 135 |
| MsG0280008391.01.T01 | MTR_1g112200 | 37.129 | 202 | 120 | 3 | 3 | 203 | 9 | 204 | 1.01e-39 | 135 |
| MsG0280008391.01.T01 | MTR_6g005360 | 39.720 | 214 | 114 | 5 | 3 | 203 | 1 | 212 | 1.23e-39 | 135 |
| MsG0280008391.01.T01 | MTR_1g085140 | 40.107 | 187 | 110 | 1 | 23 | 207 | 30 | 216 | 1.41e-39 | 135 |
| MsG0280008391.01.T01 | MTR_2g019250 | 39.151 | 212 | 112 | 5 | 7 | 203 | 4 | 213 | 2.67e-39 | 134 |
| MsG0280008391.01.T01 | MTR_7g111240 | 41.176 | 187 | 105 | 2 | 23 | 207 | 26 | 209 | 3.96e-39 | 134 |
| MsG0280008391.01.T01 | MTR_4g017040 | 42.553 | 188 | 99 | 4 | 23 | 203 | 28 | 213 | 4.33e-39 | 134 |
| MsG0280008391.01.T01 | MTR_6g005340 | 39.252 | 214 | 115 | 5 | 3 | 203 | 1 | 212 | 6.28e-39 | 134 |
| MsG0280008391.01.T01 | MTR_1g060120 | 41.916 | 167 | 96 | 1 | 40 | 206 | 56 | 221 | 8.00e-39 | 134 |
| MsG0280008391.01.T01 | MTR_7g111240 | 40.642 | 187 | 109 | 1 | 23 | 207 | 26 | 212 | 1.46e-38 | 132 |
| MsG0280008391.01.T01 | MTR_6g005330 | 39.720 | 214 | 116 | 5 | 1 | 203 | 1 | 212 | 8.24e-38 | 130 |
| MsG0280008391.01.T01 | MTR_1g023770 | 39.881 | 168 | 97 | 2 | 40 | 203 | 39 | 206 | 1.44e-37 | 130 |
| MsG0280008391.01.T01 | MTR_2g030895 | 40.828 | 169 | 95 | 3 | 40 | 203 | 7 | 175 | 4.23e-37 | 127 |
| MsG0280008391.01.T01 | MTR_2g072560 | 54.464 | 112 | 49 | 2 | 4 | 115 | 6 | 115 | 1.80e-36 | 125 |
| MsG0280008391.01.T01 | MTR_4g027415 | 49.606 | 127 | 62 | 2 | 17 | 143 | 18 | 142 | 4.09e-36 | 124 |
| MsG0280008391.01.T01 | MTR_2g030865 | 40.237 | 169 | 96 | 3 | 40 | 203 | 7 | 175 | 8.24e-36 | 124 |
| MsG0280008391.01.T01 | MTR_1g085500 | 36.612 | 183 | 114 | 1 | 23 | 203 | 29 | 211 | 7.73e-35 | 123 |
| MsG0280008391.01.T01 | MTR_5g036570 | 35.979 | 189 | 118 | 2 | 23 | 208 | 33 | 221 | 1.32e-33 | 120 |
| MsG0280008391.01.T01 | MTR_6g005380 | 38.624 | 189 | 107 | 4 | 14 | 195 | 19 | 205 | 9.02e-32 | 115 |
| MsG0280008391.01.T01 | MTR_6g005350 | 38.710 | 186 | 107 | 4 | 23 | 203 | 28 | 211 | 1.02e-31 | 115 |
| MsG0280008391.01.T01 | MTR_3g019610 | 53.398 | 103 | 46 | 2 | 4 | 106 | 6 | 106 | 5.53e-31 | 110 |
| MsG0280008391.01.T01 | MTR_2g031300 | 50.000 | 106 | 51 | 1 | 40 | 143 | 7 | 112 | 1.33e-29 | 107 |
| MsG0280008391.01.T01 | MTR_3g096330 | 33.990 | 203 | 123 | 3 | 1 | 193 | 553 | 754 | 1.94e-28 | 112 |
| MsG0280008391.01.T01 | MTR_8g007300 | 34.831 | 178 | 103 | 5 | 3 | 169 | 4 | 179 | 2.74e-28 | 106 |
| MsG0280008391.01.T01 | MTR_2g086630 | 33.010 | 206 | 122 | 5 | 2 | 203 | 8 | 201 | 5.15e-25 | 97.4 |
| MsG0280008391.01.T01 | MTR_2g086620 | 33.010 | 206 | 122 | 5 | 2 | 203 | 8 | 201 | 5.79e-25 | 97.4 |
| MsG0280008391.01.T01 | MTR_2g086640 | 32.524 | 206 | 123 | 5 | 2 | 203 | 7 | 200 | 1.25e-24 | 96.3 |
| MsG0280008391.01.T01 | MTR_4g052780 | 33.333 | 129 | 85 | 1 | 76 | 203 | 74 | 202 | 1.16e-17 | 78.2 |
| MsG0280008391.01.T01 | MTR_4g052770 | 29.665 | 209 | 129 | 7 | 1 | 203 | 6 | 202 | 1.24e-17 | 78.2 |
| MsG0280008391.01.T01 | MTR_2g096110 | 30.709 | 127 | 72 | 2 | 43 | 168 | 6 | 117 | 1.44e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008391.01.T01 | AT5G20630 | 66.190 | 210 | 70 | 1 | 1 | 209 | 1 | 210 | 2.42e-95 | 277 |
| MsG0280008391.01.T01 | AT1G72610 | 63.462 | 208 | 76 | 0 | 3 | 210 | 1 | 208 | 1.76e-86 | 254 |
| MsG0280008391.01.T01 | AT5G39160 | 43.684 | 190 | 99 | 3 | 23 | 207 | 30 | 216 | 3.38e-44 | 147 |
| MsG0280008391.01.T01 | AT5G39160 | 43.979 | 191 | 101 | 3 | 23 | 207 | 30 | 220 | 2.13e-43 | 145 |
| MsG0280008391.01.T01 | AT5G39190 | 43.979 | 191 | 101 | 3 | 23 | 207 | 30 | 220 | 2.18e-43 | 145 |
| MsG0280008391.01.T01 | AT3G04200 | 45.312 | 192 | 97 | 5 | 23 | 207 | 33 | 223 | 3.46e-43 | 145 |
| MsG0280008391.01.T01 | AT5G39130 | 43.455 | 191 | 102 | 3 | 23 | 207 | 30 | 220 | 5.46e-43 | 144 |
| MsG0280008391.01.T01 | AT1G18970 | 40.097 | 207 | 118 | 3 | 1 | 203 | 11 | 215 | 2.96e-41 | 139 |
| MsG0280008391.01.T01 | AT1G18980 | 41.379 | 203 | 114 | 3 | 3 | 203 | 16 | 215 | 4.23e-41 | 139 |
| MsG0280008391.01.T01 | AT5G39110 | 41.799 | 189 | 103 | 3 | 23 | 204 | 30 | 218 | 4.69e-40 | 137 |
| MsG0280008391.01.T01 | AT3G62020 | 37.073 | 205 | 119 | 3 | 9 | 203 | 8 | 212 | 6.99e-40 | 136 |
| MsG0280008391.01.T01 | AT5G39120 | 38.498 | 213 | 122 | 4 | 1 | 204 | 5 | 217 | 1.53e-39 | 135 |
| MsG0280008391.01.T01 | AT5G38960 | 41.837 | 196 | 99 | 5 | 23 | 207 | 32 | 223 | 1.86e-39 | 135 |
| MsG0280008391.01.T01 | AT1G02335 | 35.122 | 205 | 131 | 1 | 5 | 207 | 12 | 216 | 2.70e-39 | 134 |
| MsG0280008391.01.T01 | AT3G05950 | 42.781 | 187 | 101 | 3 | 23 | 203 | 32 | 218 | 5.16e-39 | 134 |
| MsG0280008391.01.T01 | AT3G04150 | 41.538 | 195 | 106 | 4 | 23 | 210 | 32 | 225 | 1.40e-38 | 133 |
| MsG0280008391.01.T01 | AT5G39150 | 37.674 | 215 | 123 | 4 | 1 | 204 | 3 | 217 | 4.13e-38 | 131 |
| MsG0280008391.01.T01 | AT5G39180 | 37.674 | 215 | 123 | 4 | 1 | 204 | 3 | 217 | 6.70e-38 | 131 |
| MsG0280008391.01.T01 | AT3G04150 | 41.899 | 179 | 99 | 2 | 37 | 210 | 60 | 238 | 7.08e-38 | 132 |
| MsG0280008391.01.T01 | AT5G61750 | 39.665 | 179 | 92 | 3 | 1 | 169 | 1 | 173 | 1.30e-37 | 130 |
| MsG0280008391.01.T01 | AT5G26700 | 36.634 | 202 | 122 | 3 | 3 | 203 | 10 | 206 | 2.50e-37 | 129 |
| MsG0280008391.01.T01 | AT4G14630 | 39.894 | 188 | 106 | 3 | 23 | 203 | 32 | 219 | 5.86e-37 | 129 |
| MsG0280008391.01.T01 | AT1G09560 | 43.503 | 177 | 98 | 1 | 8 | 184 | 17 | 191 | 7.47e-37 | 128 |
| MsG0280008391.01.T01 | AT3G04190 | 40.314 | 191 | 106 | 4 | 23 | 206 | 32 | 221 | 1.48e-36 | 127 |
| MsG0280008391.01.T01 | AT5G39190 | 44.304 | 158 | 83 | 2 | 55 | 207 | 41 | 198 | 1.67e-36 | 127 |
| MsG0280008391.01.T01 | AT5G39160 | 44.304 | 158 | 83 | 2 | 55 | 207 | 41 | 198 | 1.96e-36 | 127 |
| MsG0280008391.01.T01 | AT3G62020 | 38.235 | 170 | 102 | 2 | 37 | 203 | 14 | 183 | 3.40e-36 | 125 |
| MsG0280008391.01.T01 | AT3G04180 | 40.625 | 192 | 104 | 6 | 23 | 206 | 32 | 221 | 9.18e-36 | 125 |
| MsG0280008391.01.T01 | AT5G38940 | 45.033 | 151 | 79 | 2 | 23 | 169 | 32 | 182 | 1.05e-35 | 125 |
| MsG0280008391.01.T01 | AT3G05930 | 38.278 | 209 | 121 | 3 | 4 | 204 | 5 | 213 | 1.09e-35 | 125 |
| MsG0280008391.01.T01 | AT5G38940 | 45.033 | 151 | 79 | 2 | 23 | 169 | 56 | 206 | 1.73e-35 | 125 |
| MsG0280008391.01.T01 | AT5G38930 | 39.572 | 187 | 107 | 3 | 23 | 203 | 32 | 218 | 4.42e-35 | 124 |
| MsG0280008391.01.T01 | AT3G10080 | 38.286 | 175 | 102 | 2 | 21 | 190 | 30 | 203 | 9.95e-35 | 123 |
| MsG0280008391.01.T01 | AT3G10080 | 38.286 | 175 | 102 | 2 | 21 | 190 | 101 | 274 | 3.25e-34 | 124 |
| MsG0280008391.01.T01 | AT5G38910 | 44.693 | 179 | 87 | 5 | 14 | 182 | 17 | 193 | 4.62e-34 | 121 |
| MsG0280008391.01.T01 | AT3G04170 | 39.791 | 191 | 104 | 5 | 23 | 206 | 32 | 218 | 1.92e-33 | 120 |
| MsG0280008391.01.T01 | AT1G10460 | 37.640 | 178 | 103 | 4 | 37 | 208 | 42 | 217 | 4.59e-32 | 116 |
| MsG0280008391.01.T01 | AT1G74820 | 35.266 | 207 | 128 | 3 | 1 | 203 | 18 | 222 | 1.31e-31 | 115 |
| MsG0280008391.01.T01 | AT5G38910 | 34.463 | 177 | 71 | 5 | 14 | 182 | 17 | 156 | 8.59e-15 | 70.1 |
Find 50 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACCACCAACATTAATT+TGG | 0.165752 | 2:+30584792 | None:intergenic |
| GAAGTATTGGTTGTTATTAA+AGG | 0.278056 | 2:-30584914 | MsG0280008391.01.T01:CDS |
| AAGAAGCTTAAGGGTGTTCT+TGG | 0.328993 | 2:-30584641 | MsG0280008391.01.T01:CDS |
| GAATATCCAGCCGGGCCATT+TGG | 0.346876 | 2:+30585145 | None:intergenic |
| ATAATGTTTGAGGTGTTTCC+AGG | 0.356335 | 2:+30585064 | None:intergenic |
| TAATCCTCGTCTACAGATAT+TGG | 0.405016 | 2:-30584738 | MsG0280008391.01.T01:CDS |
| AAGGGTGTTCTTGGAGGTAG+TGG | 0.422600 | 2:-30584632 | MsG0280008391.01.T01:CDS |
| TCACAATTTCCCGGTGTAAA+CGG | 0.422953 | 2:-30585013 | MsG0280008391.01.T01:CDS |
| CCCCGGTGCTTCGGAAGTAT+TGG | 0.434736 | 2:-30584927 | MsG0280008391.01.T01:CDS |
| TTTCCCGGTGTAAACGGTCT+TGG | 0.446321 | 2:-30585007 | MsG0280008391.01.T01:CDS |
| CATTTCCAAATTAATGTTGG+TGG | 0.455196 | 2:-30584797 | MsG0280008391.01.T01:CDS |
| AGCGGCTTTGATAATGTTTG+AGG | 0.461127 | 2:+30585054 | None:intergenic |
| AATGCACCAAATGGCCCGGC+TGG | 0.461203 | 2:-30585151 | MsG0280008391.01.T01:CDS |
| AACCAATACTTCCGAAGCAC+CGG | 0.468211 | 2:+30584925 | None:intergenic |
| TCACACACACCCCGGTGCTT+CGG | 0.471434 | 2:-30584936 | MsG0280008391.01.T01:CDS |
| AGGTGTTTCCAGGTGCGGCT+AGG | 0.473117 | 2:+30585074 | None:intergenic |
| TTCCAGGTGCGGCTAGGCCG+TGG | 0.474288 | 2:+30585080 | None:intergenic |
| TACCACGGCCTAGCCGCACC+TGG | 0.482390 | 2:-30585082 | MsG0280008391.01.T01:CDS |
| GGCTATATCTAAACGCGCCA+TGG | 0.483268 | 2:+30584979 | None:intergenic |
| GCATTAGACTCACAATTTCC+CGG | 0.483529 | 2:-30585022 | MsG0280008391.01.T01:CDS |
| AAGCTTAAGGGTGTTCTTGG+AGG | 0.489760 | 2:-30584638 | MsG0280008391.01.T01:CDS |
| TGCTGTAGTGAAGAAGCTTA+AGG | 0.492145 | 2:-30584651 | MsG0280008391.01.T01:CDS |
| ATTAAAGGAACAATCAGTGC+TGG | 0.495019 | 2:-30584899 | MsG0280008391.01.T01:CDS |
| GCTGTAGTGAAGAAGCTTAA+GGG | 0.505860 | 2:-30584650 | MsG0280008391.01.T01:CDS |
| ACCAATACTTCCGAAGCACC+GGG | 0.531532 | 2:+30584926 | None:intergenic |
| GCAGATTACAATGCACCAAA+TGG | 0.532463 | 2:-30585160 | MsG0280008391.01.T01:CDS |
| CGTTTAGATATAGCCGTTGG+TGG | 0.560060 | 2:-30584971 | MsG0280008391.01.T01:CDS |
| GTTTGAGGTGTTTCCAGGTG+CGG | 0.569017 | 2:+30585069 | None:intergenic |
| AAGGTAAACAACATTGTCAG+AGG | 0.569703 | 2:+30584868 | None:intergenic |
| TTGCATTTCCAAATTAATGT+TGG | 0.570619 | 2:-30584800 | MsG0280008391.01.T01:CDS |
| TTACAATGCACCAAATGGCC+CGG | 0.571769 | 2:-30585155 | MsG0280008391.01.T01:CDS |
| ATTCCAAGACCGTTTACACC+GGG | 0.600502 | 2:+30585004 | None:intergenic |
| TGGAAATGCAACAATCCTTG+TGG | 0.601071 | 2:+30584812 | None:intergenic |
| GGTTTGCAAGAATATCCAGC+CGG | 0.602375 | 2:+30585136 | None:intergenic |
| TACCTTAAAACACTTCACAA+AGG | 0.608858 | 2:-30584851 | MsG0280008391.01.T01:CDS |
| TGCTACGCAGAAATCTACTA+CGG | 0.612239 | 2:+30585180 | None:intergenic |
| GATTCCAAGACCGTTTACAC+CGG | 0.616073 | 2:+30585003 | None:intergenic |
| GCACCGGGGTGTGTGTGAAG+TGG | 0.618194 | 2:+30584941 | None:intergenic |
| GTTTGCAAGAATATCCAGCC+GGG | 0.622259 | 2:+30585137 | None:intergenic |
| GTGGTAGACGAAGTCATTCG+CGG | 0.625632 | 2:+30585099 | None:intergenic |
| AAACGGTCTTGGAATCTCCA+TGG | 0.625728 | 2:-30584996 | MsG0280008391.01.T01:CDS |
| AAGTGGAATAACACCACCAA+CGG | 0.630116 | 2:+30584958 | None:intergenic |
| GTCTAATGCGGTGGTAACAG+CGG | 0.634535 | 2:+30585036 | None:intergenic |
| ATTCCACTTCACACACACCC+CGG | 0.641125 | 2:-30584944 | MsG0280008391.01.T01:CDS |
| GCGCGTTTAGATATAGCCGT+TGG | 0.647288 | 2:-30584974 | MsG0280008391.01.T01:CDS |
| TAATCCAATATCTGTAGACG+AGG | 0.678147 | 2:+30584734 | None:intergenic |
| GGGAAATTGTGAGTCTAATG+CGG | 0.678656 | 2:+30585024 | None:intergenic |
| AAATTGTGAGTCTAATGCGG+TGG | 0.693385 | 2:+30585027 | None:intergenic |
| GCGAATGACTTCGTCTACCA+CGG | 0.705558 | 2:-30585097 | MsG0280008391.01.T01:CDS |
| CCAATACTTCCGAAGCACCG+GGG | 0.761220 | 2:+30584927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTGCATTTCCAAATTAATGT+TGG | - | Chr2:30585066-30585085 | MsG0280008391.01.T01:CDS | 25.0% |
| !!! | GAAGTATTGGTTGTTATTAA+AGG | - | Chr2:30584952-30584971 | MsG0280008391.01.T01:CDS | 25.0% |
| CATTTCCAAATTAATGTTGG+TGG | - | Chr2:30585069-30585088 | MsG0280008391.01.T01:CDS | 30.0% | |
| TACCTTAAAACACTTCACAA+AGG | - | Chr2:30585015-30585034 | MsG0280008391.01.T01:CDS | 30.0% | |
| TAGAACCACCAACATTAATT+TGG | + | Chr2:30585077-30585096 | None:intergenic | 30.0% | |
| ! | GATGTTATGATTTTTCCACA+AGG | - | Chr2:30585039-30585058 | MsG0280008391.01.T01:CDS | 30.0% |
| !! | GTTTTAGTAATCAACTCAGT+TGG | + | Chr2:30585180-30585199 | None:intergenic | 30.0% |
| AAGGTAAACAACATTGTCAG+AGG | + | Chr2:30585001-30585020 | None:intergenic | 35.0% | |
| ATTAAAGGAACAATCAGTGC+TGG | - | Chr2:30584967-30584986 | MsG0280008391.01.T01:CDS | 35.0% | |
| TAATCCAATATCTGTAGACG+AGG | + | Chr2:30585135-30585154 | None:intergenic | 35.0% | |
| TAATCCTCGTCTACAGATAT+TGG | - | Chr2:30585128-30585147 | MsG0280008391.01.T01:CDS | 35.0% | |
| ! | ATAATGTTTGAGGTGTTTCC+AGG | + | Chr2:30584805-30584824 | None:intergenic | 35.0% |
| !! | CACCTTTGTGAAGTGTTTTA+AGG | + | Chr2:30585020-30585039 | None:intergenic | 35.0% |
| AAATTGTGAGTCTAATGCGG+TGG | + | Chr2:30584842-30584861 | None:intergenic | 40.0% | |
| AAGTGGAATAACACCACCAA+CGG | + | Chr2:30584911-30584930 | None:intergenic | 40.0% | |
| GCAGATTACAATGCACCAAA+TGG | - | Chr2:30584706-30584725 | MsG0280008391.01.T01:CDS | 40.0% | |
| GCATTAGACTCACAATTTCC+CGG | - | Chr2:30584844-30584863 | MsG0280008391.01.T01:CDS | 40.0% | |
| GCTGTAGTGAAGAAGCTTAA+GGG | - | Chr2:30585216-30585235 | MsG0280008391.01.T01:CDS | 40.0% | |
| GGGAAATTGTGAGTCTAATG+CGG | + | Chr2:30584845-30584864 | None:intergenic | 40.0% | |
| TCACAATTTCCCGGTGTAAA+CGG | - | Chr2:30584853-30584872 | MsG0280008391.01.T01:CDS | 40.0% | |
| TGCTACGCAGAAATCTACTA+CGG | + | Chr2:30584689-30584708 | None:intergenic | 40.0% | |
| TGCTGTAGTGAAGAAGCTTA+AGG | - | Chr2:30585215-30585234 | MsG0280008391.01.T01:CDS | 40.0% | |
| TGGAAATGCAACAATCCTTG+TGG | + | Chr2:30585057-30585076 | None:intergenic | 40.0% | |
| !! | AAGAAGCTTAAGGGTGTTCT+TGG | - | Chr2:30585225-30585244 | MsG0280008391.01.T01:CDS | 40.0% |
| !! | AGCGGCTTTGATAATGTTTG+AGG | + | Chr2:30584815-30584834 | None:intergenic | 40.0% |
| !!! | TCATTCGCGGTTACTTTTGA+TGG | + | Chr2:30584757-30584776 | None:intergenic | 40.0% |
| AAACGGTCTTGGAATCTCCA+TGG | - | Chr2:30584870-30584889 | MsG0280008391.01.T01:CDS | 45.0% | |
| AACCAATACTTCCGAAGCAC+CGG | + | Chr2:30584944-30584963 | None:intergenic | 45.0% | |
| ATTCCAAGACCGTTTACACC+GGG | + | Chr2:30584865-30584884 | None:intergenic | 45.0% | |
| CGTTTAGATATAGCCGTTGG+TGG | - | Chr2:30584895-30584914 | MsG0280008391.01.T01:CDS | 45.0% | |
| GATTCCAAGACCGTTTACAC+CGG | + | Chr2:30584866-30584885 | None:intergenic | 45.0% | |
| GGTTTGCAAGAATATCCAGC+CGG | + | Chr2:30584733-30584752 | None:intergenic | 45.0% | |
| GTTTGCAAGAATATCCAGCC+GGG | + | Chr2:30584732-30584751 | None:intergenic | 45.0% | |
| TTACAATGCACCAAATGGCC+CGG | - | Chr2:30584711-30584730 | MsG0280008391.01.T01:CDS | 45.0% | |
| !! | AAGCTTAAGGGTGTTCTTGG+AGG | - | Chr2:30585228-30585247 | MsG0280008391.01.T01:CDS | 45.0% |
| !!! | TTCGCGGTTACTTTTGATGG+TGG | + | Chr2:30584754-30584773 | None:intergenic | 45.0% |
| ATTCCACTTCACACACACCC+CGG | - | Chr2:30584922-30584941 | MsG0280008391.01.T01:CDS | 50.0% | |
| GCGAATGACTTCGTCTACCA+CGG | - | Chr2:30584769-30584788 | MsG0280008391.01.T01:CDS | 50.0% | |
| GCGCGTTTAGATATAGCCGT+TGG | - | Chr2:30584892-30584911 | MsG0280008391.01.T01:CDS | 50.0% | |
| GGCTATATCTAAACGCGCCA+TGG | + | Chr2:30584890-30584909 | None:intergenic | 50.0% | |
| GTCTAATGCGGTGGTAACAG+CGG | + | Chr2:30584833-30584852 | None:intergenic | 50.0% | |
| GTGGTAGACGAAGTCATTCG+CGG | + | Chr2:30584770-30584789 | None:intergenic | 50.0% | |
| TTTCCCGGTGTAAACGGTCT+TGG | - | Chr2:30584859-30584878 | MsG0280008391.01.T01:CDS | 50.0% | |
| ! | ACCAATACTTCCGAAGCACC+GGG | + | Chr2:30584943-30584962 | None:intergenic | 50.0% |
| ! | GTTTGAGGTGTTTCCAGGTG+CGG | + | Chr2:30584800-30584819 | None:intergenic | 50.0% |
| !! | AAGGGTGTTCTTGGAGGTAG+TGG | - | Chr2:30585234-30585253 | MsG0280008391.01.T01:CDS | 50.0% |
| GAATATCCAGCCGGGCCATT+TGG | + | Chr2:30584724-30584743 | None:intergenic | 55.0% | |
| !! | CCAATACTTCCGAAGCACCG+GGG | + | Chr2:30584942-30584961 | None:intergenic | 55.0% |
| AATGCACCAAATGGCCCGGC+TGG | - | Chr2:30584715-30584734 | MsG0280008391.01.T01:CDS | 60.0% | |
| AGGTGTTTCCAGGTGCGGCT+AGG | + | Chr2:30584795-30584814 | None:intergenic | 60.0% | |
| TCACACACACCCCGGTGCTT+CGG | - | Chr2:30584930-30584949 | MsG0280008391.01.T01:CDS | 60.0% | |
| ! | CCCCGGTGCTTCGGAAGTAT+TGG | - | Chr2:30584939-30584958 | MsG0280008391.01.T01:CDS | 60.0% |
| GCACCGGGGTGTGTGTGAAG+TGG | + | Chr2:30584928-30584947 | None:intergenic | 65.0% | |
| TACCACGGCCTAGCCGCACC+TGG | - | Chr2:30584784-30584803 | MsG0280008391.01.T01:CDS | 70.0% | |
| TTCCAGGTGCGGCTAGGCCG+TGG | + | Chr2:30584789-30584808 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 30584628 | 30585260 | 30584628 | ID=MsG0280008391.01;Name=MsG0280008391.01 |
| Chr2 | mRNA | 30584628 | 30585260 | 30584628 | ID=MsG0280008391.01.T01;Parent=MsG0280008391.01;Name=MsG0280008391.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|210 |
| Chr2 | exon | 30584628 | 30585260 | 30584628 | ID=MsG0280008391.01.T01:exon:5919;Parent=MsG0280008391.01.T01 |
| Chr2 | CDS | 30584628 | 30585260 | 30584628 | ID=MsG0280008391.01.T01:cds;Parent=MsG0280008391.01.T01 |
| Gene Sequence |
| Protein sequence |
