Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001771.01.T01 | XP_013467094.1 | 96.744 | 215 | 6 | 1 | 1 | 215 | 1 | 214 | 1.41E-149 | 424 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001771.01.T01 | O82268 | 84.277 | 159 | 25 | 0 | 38 | 196 | 27 | 185 | 6.50E-87 | 258 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001771.01.T01 | A0A072VGF5 | 96.744 | 215 | 6 | 1 | 1 | 215 | 1 | 214 | 6.74e-150 | 424 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048357.01 | MsG0180001771.01 | 0.884777 | 1.434936e-71 | 9.594007e-68 |
MsG0180000404.01 | MsG0180001771.01 | 0.803216 | 3.875326e-49 | 1.936344e-46 |
MsG0180000632.01 | MsG0180001771.01 | 0.871982 | 4.509585e-67 | 1.854899e-63 |
MsG0180001200.01 | MsG0180001771.01 | 0.858375 | 8.601657e-63 | 2.190580e-59 |
MsG0180001771.01 | MsG0180003741.01 | 0.858387 | 8.533052e-63 | 2.173971e-59 |
MsG0180001771.01 | MsG0180005540.01 | 0.803495 | 3.392924e-49 | 1.707554e-46 |
MsG0180001771.01 | MsG0280007252.01 | 0.816385 | 5.682909e-52 | 4.020992e-49 |
MsG0180001771.01 | MsG0280007305.01 | 0.886793 | 2.509487e-72 | 1.818143e-68 |
MsG0180001771.01 | MsG0280007414.01 | 0.848262 | 6.856679e-60 | 1.251103e-56 |
MsG0180001771.01 | MsG0280008390.01 | 0.813348 | 2.678753e-51 | 1.745098e-48 |
MsG0180001771.01 | MsG0280008391.01 | 0.821504 | 3.898446e-53 | 3.177295e-50 |
MsG0180001771.01 | MsG0280008392.01 | 0.831336 | 1.768849e-55 | 1.913631e-52 |
MsG0180001771.01 | MsG0280008395.01 | 0.832245 | 1.055094e-55 | 1.172464e-52 |
MsG0180001771.01 | MsG0280010163.01 | 0.819324 | 1.233069e-52 | 9.458056e-50 |
MsG0180001771.01 | MsG0280010320.01 | 0.800903 | 1.158628e-48 | 5.459174e-46 |
MsG0180001771.01 | MsG0280010839.01 | 0.807849 | 4.134657e-50 | 2.327636e-47 |
MsG0180001771.01 | MsG0380011496.01 | 0.840578 | 7.992501e-58 | 1.143377e-54 |
MsG0180001771.01 | MsG0380011501.01 | 0.822155 | 2.755537e-53 | 2.287756e-50 |
MsG0180001771.01 | MsG0380016465.01 | 0.857118 | 2.029308e-62 | 4.955066e-59 |
MsG0180001771.01 | MsG0380016466.01 | 0.800606 | 1.331847e-48 | 6.227937e-46 |
MsG0180001771.01 | MsG0380017823.01 | 0.823747 | 1.172400e-53 | 1.018483e-50 |
MsG0180001771.01 | MsG0380017869.01 | 0.802404 | 5.700944e-49 | 2.790317e-46 |
MsG0180001771.01 | MsG0480018909.01 | 0.830995 | 2.144497e-55 | 2.296813e-52 |
MsG0180001771.01 | MsG0480019279.01 | 0.809971 | 1.453326e-50 | 8.654147e-48 |
MsG0180001771.01 | MsG0480020096.01 | 0.808905 | 2.461411e-50 | 1.424645e-47 |
MsG0180001771.01 | MsG0480024022.01 | 0.856652 | 2.783767e-62 | 6.691066e-59 |
MsG0180001771.01 | MsG0580025466.01 | 0.802480 | 5.500496e-49 | 2.697245e-46 |
MsG0180001771.01 | MsG0580025974.01 | 0.823577 | 1.285085e-53 | 1.110869e-50 |
MsG0180001771.01 | MsG0580026198.01 | 0.831130 | 1.987801e-55 | 2.137476e-52 |
MsG0180001771.01 | MsG0580027925.01 | 0.839290 | 1.731166e-57 | 2.379780e-54 |
MsG0180001771.01 | MsG0580028436.01 | 0.824194 | 9.210571e-54 | 8.101698e-51 |
MsG0180001771.01 | MsG0580028960.01 | 0.807556 | 4.770887e-50 | 2.665399e-47 |
MsG0180001771.01 | MsG0580029310.01 | 0.851527 | 8.374517e-61 | 1.699902e-57 |
MsG0180001771.01 | MsG0580029405.01 | 0.804060 | 2.589388e-49 | 1.322248e-46 |
MsG0180001771.01 | MsG0580029417.01 | 0.877030 | 8.711819e-69 | 4.315835e-65 |
MsG0180001771.01 | MsG0580029418.01 | 0.896531 | 3.372824e-76 | 3.664363e-72 |
MsG0180001771.01 | MsG0680030328.01 | 0.801004 | 1.104497e-48 | 5.217689e-46 |
MsG0180001771.01 | MsG0680031342.01 | 0.807485 | 4.938813e-50 | 2.754264e-47 |
MsG0180001771.01 | MsG0680031428.01 | 0.801778 | 7.666641e-49 | 3.692895e-46 |
MsG0180001771.01 | MsG0680031707.01 | 0.892124 | 2.119751e-74 | 1.911230e-70 |
MsG0180001771.01 | MsG0680031959.01 | 0.822410 | 2.404195e-53 | 2.010834e-50 |
MsG0180001771.01 | MsG0680034835.01 | 0.805955 | 1.039481e-49 | 5.573109e-47 |
MsG0180001771.01 | MsG0680035658.01 | 0.822447 | 2.356837e-53 | 1.973266e-50 |
MsG0180001771.01 | MsG0680035683.01 | 0.813950 | 1.974543e-51 | 1.307447e-48 |
MsG0180001771.01 | MsG0780036148.01 | 0.811010 | 8.669501e-51 | 5.306839e-48 |
MsG0180001771.01 | MsG0780038048.01 | 0.823831 | 1.120442e-53 | 9.755881e-51 |
MsG0180001771.01 | MsG0780040846.01 | 0.871066 | 9.070566e-67 | 3.609788e-63 |
MsG0180001771.01 | MsG0780040966.01 | 0.846166 | 2.576219e-59 | 4.395041e-56 |
MsG0180001771.01 | MsG0780041259.01 | 0.853900 | 1.759792e-61 | 3.861339e-58 |
MsG0180001771.01 | MsG0780041676.01 | 0.842001 | 3.376198e-58 | 5.048883e-55 |
MsG0180001771.01 | MsG0780041698.01 | 0.855544 | 5.874707e-62 | 1.361014e-58 |
MsG0180001771.01 | MsG0880041858.01 | 0.879655 | 1.044065e-69 | 5.707080e-66 |
MsG0180001771.01 | MsG0880042442.01 | 0.822101 | 2.836791e-53 | 2.351534e-50 |
MsG0180001771.01 | MsG0880042958.01 | 0.842184 | 3.019311e-58 | 4.541245e-55 |
MsG0180001771.01 | MsG0880042959.01 | 0.831412 | 1.693662e-55 | 1.836431e-52 |
MsG0180001771.01 | MsG0880044704.01 | 0.800938 | 1.139670e-48 | 5.374485e-46 |
MsG0180001771.01 | MsG0880045179.01 | 0.810347 | 1.206095e-50 | 7.252542e-48 |
MsG0180001771.01 | MsG0880045495.01 | 0.806541 | 7.823734e-50 | 4.257794e-47 |
MsG0180001771.01 | MsG0880045585.01 | 0.844844 | 5.878256e-59 | 9.612049e-56 |
MsG0180001771.01 | MsG0880045586.01 | 0.863195 | 2.960815e-64 | 8.900558e-61 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001771.01.T01 | MTR_1g442860 | 96.744 | 215 | 6 | 1 | 1 | 215 | 1 | 214 | 1.71e-153 | 424 |
MsG0180001771.01.T01 | MTR_1g075990 | 80.460 | 174 | 28 | 2 | 22 | 195 | 16 | 183 | 1.28e-90 | 265 |
MsG0180001771.01.T01 | MTR_5g072510 | 80.282 | 142 | 28 | 0 | 55 | 196 | 27 | 168 | 1.13e-87 | 258 |
MsG0180001771.01.T01 | MTR_7g097030 | 75.385 | 195 | 47 | 1 | 1 | 195 | 1 | 194 | 3.18e-87 | 256 |
MsG0180001771.01.T01 | MTR_4g094428 | 83.704 | 135 | 22 | 0 | 64 | 198 | 45 | 179 | 9.49e-87 | 256 |
MsG0180001771.01.T01 | MTR_1g069825 | 72.308 | 195 | 41 | 1 | 1 | 195 | 1 | 182 | 1.67e-85 | 253 |
MsG0180001771.01.T01 | MTR_3g031830 | 70.760 | 171 | 39 | 2 | 37 | 196 | 3 | 173 | 4.15e-76 | 229 |
MsG0180001771.01.T01 | MTR_2g092950 | 71.724 | 145 | 41 | 0 | 44 | 188 | 2 | 146 | 5.32e-75 | 224 |
MsG0180001771.01.T01 | MTR_4g079930 | 74.436 | 133 | 34 | 0 | 56 | 188 | 20 | 152 | 1.40e-74 | 223 |
MsG0180001771.01.T01 | MTR_2g076400 | 65.644 | 163 | 55 | 1 | 34 | 195 | 1 | 163 | 1.78e-73 | 220 |
MsG0180001771.01.T01 | MTR_2g016110 | 72.662 | 139 | 38 | 0 | 57 | 195 | 27 | 165 | 7.82e-72 | 216 |
MsG0180001771.01.T01 | MTR_7g115700 | 63.924 | 158 | 55 | 2 | 40 | 196 | 2 | 158 | 6.37e-71 | 214 |
MsG0180001771.01.T01 | MTR_1g080210 | 78.378 | 148 | 32 | 0 | 42 | 189 | 17 | 164 | 6.44e-71 | 214 |
MsG0180001771.01.T01 | MTR_8g086350 | 72.800 | 125 | 34 | 0 | 64 | 188 | 30 | 154 | 1.01e-57 | 181 |
MsG0180001771.01.T01 | MTR_1g114020 | 78.431 | 51 | 11 | 0 | 58 | 108 | 64 | 114 | 8.57e-23 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001771.01.T01 | AT2G31160 | 84.277 | 159 | 25 | 0 | 38 | 196 | 27 | 185 | 6.63e-88 | 258 |
MsG0180001771.01.T01 | AT1G07090 | 77.551 | 147 | 28 | 1 | 51 | 197 | 22 | 163 | 1.28e-86 | 254 |
MsG0180001771.01.T01 | AT3G23290 | 95.238 | 126 | 6 | 0 | 64 | 189 | 47 | 172 | 5.96e-82 | 243 |
MsG0180001771.01.T01 | AT5G58500 | 80.741 | 135 | 25 | 1 | 63 | 196 | 17 | 151 | 9.78e-82 | 241 |
MsG0180001771.01.T01 | AT5G28490 | 80.405 | 148 | 23 | 1 | 47 | 194 | 13 | 154 | 1.96e-75 | 226 |
MsG0180001771.01.T01 | AT2G42610 | 77.344 | 128 | 29 | 0 | 61 | 188 | 21 | 148 | 9.93e-73 | 218 |
MsG0180001771.01.T01 | AT2G42610 | 77.344 | 128 | 29 | 0 | 61 | 188 | 21 | 148 | 9.93e-73 | 218 |
MsG0180001771.01.T01 | AT3G04510 | 65.556 | 180 | 43 | 2 | 15 | 194 | 2 | 162 | 6.36e-71 | 215 |
MsG0180001771.01.T01 | AT1G78815 | 61.745 | 149 | 57 | 0 | 64 | 212 | 39 | 187 | 3.54e-66 | 202 |
MsG0180001771.01.T01 | AT4G18610 | 64.138 | 145 | 51 | 1 | 45 | 188 | 17 | 161 | 5.98e-64 | 197 |
MsG0180001771.01.T01 | AT1G16910 | 57.419 | 155 | 61 | 1 | 39 | 193 | 2 | 151 | 6.35e-62 | 191 |
Find 49 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCGTTACCTCGACCAATT+TGG | 0.269006 | 1:+26666601 | MsG0180001771.01.T01:CDS |
TGGATTTGGATGTCCATAAA+AGG | 0.277270 | 1:-26666653 | None:intergenic |
GGACATGGTGCAGGTGGATT+TGG | 0.320133 | 1:-26666667 | None:intergenic |
GACTTTACCTTCGCGAAGTT+AGG | 0.323181 | 1:+26666806 | MsG0180001771.01.T01:CDS |
GTTCATCATGTCTTTGTTGT+TGG | 0.334448 | 1:-26666329 | None:intergenic |
GGTGGTGGTGGTGGCGGCTG+AGG | 0.339795 | 1:-26666886 | None:intergenic |
GTTGTTGTTGATGTTGTTGA+TGG | 0.340470 | 1:-26666460 | None:intergenic |
GGGTTTGTTATGTTGATCAT+AGG | 0.347871 | 1:-26666358 | None:intergenic |
AAGCCAGAAGCTAATCCTTT+TGG | 0.361490 | 1:+26666769 | MsG0180001771.01.T01:CDS |
GTGGTGGTCTATGGTTTCTT+AGG | 0.368488 | 1:-26666537 | None:intergenic |
AAATTCTTGAAGAGAATTCA+TGG | 0.377394 | 1:-26666296 | None:intergenic |
AGACGAGATTGGAACACATT+TGG | 0.384522 | 1:+26666508 | MsG0180001771.01.T01:CDS |
ACTTTACCTTCGCGAAGTTA+GGG | 0.398859 | 1:+26666807 | MsG0180001771.01.T01:CDS |
TTATTTGATGGTGGTGGTGG+TGG | 0.403399 | 1:-26666898 | None:intergenic |
GCACCAAAAGGATTAGCTTC+TGG | 0.418214 | 1:-26666772 | None:intergenic |
GTTGTAGTTGCATTATTTGA+TGG | 0.419514 | 1:-26666910 | None:intergenic |
GGTTTGTTATGTTGATCATA+GGG | 0.430093 | 1:-26666357 | None:intergenic |
GGTAGTCTTGATGCACTCAT+TGG | 0.434097 | 1:+26666712 | MsG0180001771.01.T01:CDS |
CTTGTCCTCTTCGCCAAGCG+TGG | 0.459831 | 1:+26666689 | MsG0180001771.01.T01:CDS |
GGTGGTGGTGGCGGCTGAGG+CGG | 0.465046 | 1:-26666883 | None:intergenic |
AGAATCAAAAGAGACGAGAT+TGG | 0.470010 | 1:+26666497 | MsG0180001771.01.T01:CDS |
GCATTATTTGATGGTGGTGG+TGG | 0.471088 | 1:-26666901 | None:intergenic |
TTGTCCTCTTCGCCAAGCGT+GGG | 0.488923 | 1:+26666690 | MsG0180001771.01.T01:CDS |
CGAGGTAACGCAAGAATTCA+AGG | 0.492274 | 1:-26666591 | None:intergenic |
AGAGTGAAAGTGGTGGTCTA+TGG | 0.493036 | 1:-26666546 | None:intergenic |
GTAGTCTTGATGCACTCATT+GGG | 0.507513 | 1:+26666713 | MsG0180001771.01.T01:CDS |
GTTGCATTATTTGATGGTGG+TGG | 0.513644 | 1:-26666904 | None:intergenic |
CGAACAGCACGAGCACCAAA+AGG | 0.514487 | 1:-26666784 | None:intergenic |
GTTGTTGATGTTGTTGATGG+TGG | 0.518465 | 1:-26666457 | None:intergenic |
CACGCTTGGCGAAGAGGACA+AGG | 0.527749 | 1:-26666688 | None:intergenic |
CTTTCACTCTCACGTTGTAG+TGG | 0.531680 | 1:+26666559 | MsG0180001771.01.T01:CDS |
GGATTTGGATGTCCATAAAA+GGG | 0.532805 | 1:-26666652 | None:intergenic |
TGATGTTGTTGTTGTTGATG+AGG | 0.537472 | 1:-26666434 | None:intergenic |
GTCATTGACATGGATGATGA+TGG | 0.542243 | 1:-26666379 | None:intergenic |
CATCAAGACTACCCCACGCT+TGG | 0.543485 | 1:-26666702 | None:intergenic |
GTAGTTGCATTATTTGATGG+TGG | 0.544780 | 1:-26666907 | None:intergenic |
AGAGGACAAGGACATGGTGC+AGG | 0.565916 | 1:-26666676 | None:intergenic |
CTACCCCACGCTTGGCGAAG+AGG | 0.567363 | 1:-26666694 | None:intergenic |
CTACAACGTGAGAGTGAAAG+TGG | 0.580478 | 1:-26666556 | None:intergenic |
GGACAAGGACATGGTGCAGG+TGG | 0.588264 | 1:-26666673 | None:intergenic |
TGTTGTAGATGATGATGGTA+TGG | 0.601682 | 1:-26666401 | None:intergenic |
GCTGATGTTGTAGATGATGA+TGG | 0.601848 | 1:-26666406 | None:intergenic |
TGTCCTCTTCGCCAAGCGTG+GGG | 0.612011 | 1:+26666691 | MsG0180001771.01.T01:CDS |
TGGCGAAGAGGACAAGGACA+TGG | 0.629659 | 1:-26666682 | None:intergenic |
GATTCTCAAGCTAAAGCTAG+AGG | 0.638819 | 1:+26666829 | MsG0180001771.01.T01:CDS |
TGATGGTATGGTCATTGACA+TGG | 0.640174 | 1:-26666389 | None:intergenic |
TCATTGACATGGATGATGAT+GGG | 0.643402 | 1:-26666378 | None:intergenic |
GAGAATCCCTAACTTCGCGA+AGG | 0.649287 | 1:-26666813 | None:intergenic |
CAACGTGAGAGTGAAAGTGG+TGG | 0.746060 | 1:-26666553 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GTTGTAGTTGCATTATTTGA+TGG | - | Chr1:26666913-26666932 | None:intergenic | 30.0% | |
!! | GGTTTGTTATGTTGATCATA+GGG | - | Chr1:26666360-26666379 | None:intergenic | 30.0% |
!! | TTTTGATTCTCGTATCTACT+TGG | - | Chr1:26666487-26666506 | None:intergenic | 30.0% |
!!! | GAACCTTTGTTTTTCCAAAT+TGG | - | Chr1:26666618-26666637 | None:intergenic | 30.0% |
AGAATCAAAAGAGACGAGAT+TGG | + | Chr1:26666497-26666516 | MsG0180001771.01.T01:CDS | 35.0% | |
CGACCAATTTGGAAAAACAA+AGG | + | Chr1:26666612-26666631 | MsG0180001771.01.T01:CDS | 35.0% | |
GGATTTGGATGTCCATAAAA+GGG | - | Chr1:26666655-26666674 | None:intergenic | 35.0% | |
GTAGTTGCATTATTTGATGG+TGG | - | Chr1:26666910-26666929 | None:intergenic | 35.0% | |
TCATTGACATGGATGATGAT+GGG | - | Chr1:26666381-26666400 | None:intergenic | 35.0% | |
TGGATTTGGATGTCCATAAA+AGG | - | Chr1:26666656-26666675 | None:intergenic | 35.0% | |
! | ACTCAGATTTGTCCCTTTTA+TGG | + | Chr1:26666640-26666659 | MsG0180001771.01.T01:CDS | 35.0% |
! | GTTCATCATGTCTTTGTTGT+TGG | - | Chr1:26666332-26666351 | None:intergenic | 35.0% |
! | GTTGTTGTTGATGTTGTTGA+TGG | - | Chr1:26666463-26666482 | None:intergenic | 35.0% |
! | TGATGTTGTTGTTGTTGATG+AGG | - | Chr1:26666437-26666456 | None:intergenic | 35.0% |
!! | CTGCTTTTGAAGAAAATGGT+GGG | + | Chr1:26666746-26666765 | MsG0180001771.01.T01:CDS | 35.0% |
!! | GGGTTTGTTATGTTGATCAT+AGG | - | Chr1:26666361-26666380 | None:intergenic | 35.0% |
!! | TGTTGTAGATGATGATGGTA+TGG | - | Chr1:26666404-26666423 | None:intergenic | 35.0% |
!! | TTGTTTTTCCAAATTGGTCG+AGG | - | Chr1:26666612-26666631 | None:intergenic | 35.0% |
!!! | AGAGCTGCTTTTGAAGAAAA+TGG | + | Chr1:26666742-26666761 | MsG0180001771.01.T01:CDS | 35.0% |
ACTTTACCTTCGCGAAGTTA+GGG | + | Chr1:26666807-26666826 | MsG0180001771.01.T01:CDS | 40.0% | |
AGACGAGATTGGAACACATT+TGG | + | Chr1:26666508-26666527 | MsG0180001771.01.T01:CDS | 40.0% | |
GATTCTCAAGCTAAAGCTAG+AGG | + | Chr1:26666829-26666848 | MsG0180001771.01.T01:CDS | 40.0% | |
GCTGATGTTGTAGATGATGA+TGG | - | Chr1:26666409-26666428 | None:intergenic | 40.0% | |
GTCATTGACATGGATGATGA+TGG | - | Chr1:26666382-26666401 | None:intergenic | 40.0% | |
TGATGGTATGGTCATTGACA+TGG | - | Chr1:26666392-26666411 | None:intergenic | 40.0% | |
! | AAGCCAGAAGCTAATCCTTT+TGG | + | Chr1:26666769-26666788 | MsG0180001771.01.T01:CDS | 40.0% |
! | GTAGTCTTGATGCACTCATT+GGG | + | Chr1:26666713-26666732 | MsG0180001771.01.T01:CDS | 40.0% |
! | GTTGTTGATGTTGTTGATGG+TGG | - | Chr1:26666460-26666479 | None:intergenic | 40.0% |
!! | GTTGCATTATTTGATGGTGG+TGG | - | Chr1:26666907-26666926 | None:intergenic | 40.0% |
!!! | GCTGCTTTTGAAGAAAATGG+TGG | + | Chr1:26666745-26666764 | MsG0180001771.01.T01:CDS | 40.0% |
AGAGTGAAAGTGGTGGTCTA+TGG | - | Chr1:26666549-26666568 | None:intergenic | 45.0% | |
CGAGGTAACGCAAGAATTCA+AGG | - | Chr1:26666594-26666613 | None:intergenic | 45.0% | |
CTACAACGTGAGAGTGAAAG+TGG | - | Chr1:26666559-26666578 | None:intergenic | 45.0% | |
CTTTCACTCTCACGTTGTAG+TGG | + | Chr1:26666559-26666578 | MsG0180001771.01.T01:CDS | 45.0% | |
GACTTTACCTTCGCGAAGTT+AGG | + | Chr1:26666806-26666825 | MsG0180001771.01.T01:CDS | 45.0% | |
GTGGTGGTCTATGGTTTCTT+AGG | - | Chr1:26666540-26666559 | None:intergenic | 45.0% | |
TTGCGTTACCTCGACCAATT+TGG | + | Chr1:26666601-26666620 | MsG0180001771.01.T01:CDS | 45.0% | |
! | GGTAGTCTTGATGCACTCAT+TGG | + | Chr1:26666712-26666731 | MsG0180001771.01.T01:CDS | 45.0% |
!! | GCACCAAAAGGATTAGCTTC+TGG | - | Chr1:26666775-26666794 | None:intergenic | 45.0% |
!! | GCATTATTTGATGGTGGTGG+TGG | - | Chr1:26666904-26666923 | None:intergenic | 45.0% |
!! | TTATTTGATGGTGGTGGTGG+TGG | - | Chr1:26666901-26666920 | None:intergenic | 45.0% |
CAACGTGAGAGTGAAAGTGG+TGG | - | Chr1:26666556-26666575 | None:intergenic | 50.0% | |
GAGAATCCCTAACTTCGCGA+AGG | - | Chr1:26666816-26666835 | None:intergenic | 50.0% | |
AGAGGACAAGGACATGGTGC+AGG | - | Chr1:26666679-26666698 | None:intergenic | 55.0% | |
CATCAAGACTACCCCACGCT+TGG | - | Chr1:26666705-26666724 | None:intergenic | 55.0% | |
CGAACAGCACGAGCACCAAA+AGG | - | Chr1:26666787-26666806 | None:intergenic | 55.0% | |
TGGCGAAGAGGACAAGGACA+TGG | - | Chr1:26666685-26666704 | None:intergenic | 55.0% | |
TTGTCCTCTTCGCCAAGCGT+GGG | + | Chr1:26666690-26666709 | MsG0180001771.01.T01:CDS | 55.0% | |
! | GGACATGGTGCAGGTGGATT+TGG | - | Chr1:26666670-26666689 | None:intergenic | 55.0% |
!! | TTTGATGGTGGTGGTGGTGG+TGG | - | Chr1:26666898-26666917 | None:intergenic | 55.0% |
CACGCTTGGCGAAGAGGACA+AGG | - | Chr1:26666691-26666710 | None:intergenic | 60.0% | |
CTTGTCCTCTTCGCCAAGCG+TGG | + | Chr1:26666689-26666708 | MsG0180001771.01.T01:CDS | 60.0% | |
GGACAAGGACATGGTGCAGG+TGG | - | Chr1:26666676-26666695 | None:intergenic | 60.0% | |
TGTCCTCTTCGCCAAGCGTG+GGG | + | Chr1:26666691-26666710 | MsG0180001771.01.T01:CDS | 60.0% | |
CTACCCCACGCTTGGCGAAG+AGG | - | Chr1:26666697-26666716 | None:intergenic | 65.0% | |
!! | GATGGTGGTGGTGGTGGTGG+CGG | - | Chr1:26666895-26666914 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGCGGCTGAGG+CGG | - | Chr1:26666886-26666905 | None:intergenic | 75.0% |
!! | GGTGGTGGTGGTGGCGGCTG+AGG | - | Chr1:26666889-26666908 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 26666298 | 26666945 | 26666298 | ID=MsG0180001771.01;Name=MsG0180001771.01 |
Chr1 | mRNA | 26666298 | 26666945 | 26666298 | ID=MsG0180001771.01.T01;Parent=MsG0180001771.01;Name=MsG0180001771.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|215 |
Chr1 | exon | 26666298 | 26666945 | 26666298 | ID=MsG0180001771.01.T01:exon:35201;Parent=MsG0180001771.01.T01 |
Chr1 | CDS | 26666298 | 26666945 | 26666298 | ID=MsG0180001771.01.T01:cds;Parent=MsG0180001771.01.T01 |
Gene Sequence |
Protein sequence |