AlfalfaGEDB | MsG0280008392.01

M. sativa cultivar ZhongmuNo.1 / MsG0280008392.01

KEGG: -
GO: GO:0030145 GO:0045735
PFAM: PF00190

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008392.01.T01	XP_013463539.1	95.238	210	10	0	1	210	1	210	8.46E-141	402

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008392.01.T01	Q9ZRA4	73.558	208	54	1	3	209	1	208	1.50E-106	308

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008392.01.T01	A0A072V680	95.238	210	10	0	1	210	1	210	4.04e-141	402

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047899.01	MsG0280008392.01	0.800796	1.218092e-48	5.723438e-46
MsG0080048357.01	MsG0280008392.01	0.850485	1.647636e-60	3.232020e-57
MsG0180000036.01	MsG0280008392.01	0.809651	1.703176e-50	1.005701e-47
MsG0180000038.01	MsG0280008392.01	0.823768	1.159303e-53	1.007697e-50
MsG0180000098.01	MsG0280008392.01	0.831345	1.759952e-55	1.904591e-52
MsG0180000404.01	MsG0280008392.01	0.858104	1.035989e-62	2.614537e-59
MsG0180000632.01	MsG0280008392.01	0.810877	9.262786e-51	5.649607e-48
MsG0180000782.01	MsG0280008392.01	0.840478	8.485925e-58	1.210218e-54
MsG0180001200.01	MsG0280008392.01	0.802168	6.376759e-49	3.102245e-46
MsG0180001771.01	MsG0280008392.01	0.831336	1.768849e-55	1.913631e-52
MsG0180001892.01	MsG0280008392.01	0.800358	1.496485e-48	6.954064e-46
MsG0180003741.01	MsG0280008392.01	0.907581	4.340999e-81	7.751038e-77
MsG0180004765.01	MsG0280008392.01	0.829476	5.038179e-55	5.162136e-52
MsG0180005113.01	MsG0280008392.01	0.885472	7.898239e-72	5.427679e-68
MsG0180005153.01	MsG0280008392.01	0.881736	1.873043e-70	1.110047e-66
MsG0180005485.01	MsG0280008392.01	0.809550	1.790218e-50	1.054247e-47
MsG0180005524.01	MsG0280008392.01	0.804983	1.662309e-49	8.692425e-47
MsG0180006017.01	MsG0280008392.01	0.810600	1.063335e-50	6.437408e-48
MsG0280006592.01	MsG0280008392.01	0.800492	1.405209e-48	6.551983e-46
MsG0280006937.01	MsG0280008392.01	0.830439	2.935442e-55	3.092683e-52
MsG0280006966.01	MsG0280008392.01	0.853971	1.678810e-61	3.692431e-58
MsG0280006967.01	MsG0280008392.01	0.851390	9.156185e-61	1.850496e-57
MsG0280007305.01	MsG0280008392.01	0.818300	2.106295e-52	1.570631e-49
MsG0280007432.01	MsG0280008392.01	0.800535	1.377106e-48	6.427877e-46
MsG0280007506.01	MsG0280008392.01	0.801745	7.788005e-49	3.748162e-46
MsG0280007515.01	MsG0280008392.01	0.813192	2.898649e-51	1.880220e-48
MsG0280007547.01	MsG0280008392.01	0.803458	3.452952e-49	1.736073e-46
MsG0280007884.01	MsG0280008392.01	0.813777	2.155639e-51	1.420690e-48
MsG0280007955.01	MsG0280008392.01	0.813619	2.335647e-51	1.532807e-48
MsG0280008390.01	MsG0280008392.01	0.945962	1.140618e-104	1.811736e-99
MsG0280008391.01	MsG0280008392.01	0.948424	9.705919e-107	1.813730e-101
MsG0280008392.01	MsG0280008395.01	0.932186	1.243076e-94	8.215800e-90
MsG0280008392.01	MsG0280008396.01	0.874651	5.718276e-68	2.594360e-64
MsG0280008392.01	MsG0280008397.01	0.908871	1.064080e-81	2.015606e-77
MsG0280008392.01	MsG0280009920.01	0.821060	4.933737e-53	3.972351e-50
MsG0280008392.01	MsG0280010489.01	0.810387	1.182088e-50	7.115539e-48
MsG0280008392.01	MsG0280010778.01	0.804267	2.345019e-49	1.203758e-46
MsG0280008392.01	MsG0380011496.01	0.838778	2.348847e-57	3.178872e-54
MsG0280008392.01	MsG0380011501.01	0.818939	1.508975e-52	1.145409e-49
MsG0280008392.01	MsG0380011675.01	0.807780	4.277165e-50	2.403591e-47
MsG0280008392.01	MsG0380012208.01	0.806279	8.884995e-50	4.803074e-47
MsG0280008392.01	MsG0380014115.01	0.807690	4.468671e-50	2.505297e-47
MsG0280008392.01	MsG0380014221.01	0.810587	1.070246e-50	6.477047e-48
MsG0280008392.01	MsG0380014495.01	0.814600	1.418451e-51	9.559561e-49
MsG0280008392.01	MsG0380014926.01	0.824455	7.998926e-54	7.088080e-51
MsG0280008392.01	MsG0380015577.01	0.827331	1.659567e-54	1.597366e-51
MsG0280008392.01	MsG0480018200.01	0.811658	6.269903e-51	3.903505e-48
MsG0280008392.01	MsG0480018423.01	0.818530	1.868223e-52	1.402031e-49
MsG0280008392.01	MsG0480018653.01	0.808861	2.515794e-50	1.454446e-47
MsG0280008392.01	MsG0480018909.01	0.834026	3.802203e-56	4.456609e-53
MsG0280008392.01	MsG0480019279.01	0.827159	1.825135e-54	1.747693e-51
MsG0280008392.01	MsG0480020096.01	0.821315	4.309688e-53	3.494187e-50
MsG0280008392.01	MsG0480020574.01	0.839619	1.422246e-57	1.974942e-54
MsG0280008392.01	MsG0480020768.01	0.825858	3.726806e-54	3.438116e-51
MsG0280008392.01	MsG0480020890.01	0.800337	1.511409e-48	7.019580e-46
MsG0280008392.01	MsG0480021873.01	0.817048	4.035033e-52	2.907437e-49
MsG0280008392.01	MsG0480021894.01	0.826086	3.289385e-54	3.054003e-51
MsG0280008392.01	MsG0480023601.01	0.806285	8.860654e-50	4.790628e-47
MsG0280008392.01	MsG0480024022.01	0.869675	2.591817e-66	9.808977e-63
MsG0280008392.01	MsG0480024030.01	0.809244	2.082657e-50	1.216517e-47
MsG0280008392.01	MsG0580024443.01	0.809434	1.895976e-50	1.113067e-47
MsG0280008392.01	MsG0580024790.01	-0.803113	4.070562e-49	2.028450e-46
MsG0280008392.01	MsG0580024966.01	0.803814	2.912231e-49	1.477715e-46
MsG0280008392.01	MsG0580025407.01	-0.810839	9.439747e-51	5.751688e-48
MsG0280008392.01	MsG0580025449.01	0.800246	1.577127e-48	7.307743e-46
MsG0280008392.01	MsG0580025607.01	0.804029	2.627462e-49	1.340596e-46
MsG0280008392.01	MsG0580025974.01	0.808939	2.420234e-50	1.402106e-47
MsG0280008392.01	MsG0580027826.01	0.804135	2.497901e-49	1.277934e-46
MsG0280008392.01	MsG0580027925.01	0.843447	1.393403e-58	2.180795e-55
MsG0280008392.01	MsG0580028960.01	0.807712	4.420225e-50	2.479633e-47
MsG0280008392.01	MsG0580029236.01	0.815402	9.417962e-52	6.486748e-49
MsG0280008392.01	MsG0580029310.01	0.855043	8.218948e-62	1.872695e-58
MsG0280008392.01	MsG0580029406.01	0.820695	5.988537e-53	4.772065e-50
MsG0280008392.01	MsG0580029417.01	0.807927	3.979526e-50	2.244853e-47
MsG0280008392.01	MsG0580029418.01	0.835362	1.754294e-56	2.140545e-53
MsG0280008392.01	MsG0580029736.01	0.820173	7.888543e-53	6.196530e-50
MsG0280008392.01	MsG0580029941.01	0.815282	1.001317e-51	6.874313e-49
MsG0280008392.01	MsG0680030328.01	0.843690	1.200047e-58	1.892558e-55
MsG0280008392.01	MsG0680030329.01	0.820706	5.953006e-53	4.745314e-50
MsG0280008392.01	MsG0680030784.01	0.809209	2.118266e-50	1.236179e-47
MsG0280008392.01	MsG0680030880.01	0.800124	1.669425e-48	7.711680e-46
MsG0280008392.01	MsG0680030908.01	0.827697	1.355767e-54	1.318688e-51
MsG0280008392.01	MsG0680031263.01	0.809718	1.647308e-50	9.744299e-48
MsG0280008392.01	MsG0680031365.01	0.803716	3.053171e-49	1.545229e-46
MsG0280008392.01	MsG0680031428.01	0.823692	1.207722e-53	1.047562e-50
MsG0280008392.01	MsG0680031431.01	0.837204	5.967705e-57	7.695917e-54
MsG0280008392.01	MsG0680031621.01	0.827160	1.823475e-54	1.746176e-51
MsG0280008392.01	MsG0680031707.01	0.857207	1.909695e-62	4.676858e-59
MsG0280008392.01	MsG0680031959.01	0.836649	8.269915e-57	1.048671e-53
MsG0280008392.01	MsG0680035498.01	0.802189	6.311982e-49	3.072280e-46
MsG0280008392.01	MsG0680035658.01	0.805132	1.547049e-49	8.120794e-47
MsG0280008392.01	MsG0780036148.01	0.817618	3.002897e-52	2.197653e-49
MsG0280008392.01	MsG0780036307.01	0.808332	3.262013e-50	1.860072e-47
MsG0280008392.01	MsG0780036486.01	0.816104	6.566505e-52	4.610769e-49
MsG0280008392.01	MsG0780036593.01	0.811762	5.951529e-51	3.715723e-48
MsG0280008392.01	MsG0780036757.01	0.841727	3.986799e-58	5.910472e-55
MsG0280008392.01	MsG0780036766.01	0.835884	1.294010e-56	1.603662e-53
MsG0280008392.01	MsG0780036979.01	0.812018	5.235492e-51	3.291138e-48
MsG0280008392.01	MsG0780037341.01	0.815772	7.789063e-52	5.420032e-49
MsG0280008392.01	MsG0780037372.01	0.810989	8.760779e-51	5.359845e-48
MsG0280008392.01	MsG0780037395.01	0.811398	7.141173e-51	4.415907e-48
MsG0280008392.01	MsG0780037492.01	0.801328	9.484118e-49	4.516702e-46
MsG0280008392.01	MsG0780038744.01	0.802199	6.282882e-49	3.058843e-46
MsG0280008392.01	MsG0780039940.01	0.804155	2.473725e-49	1.266244e-46
MsG0280008392.01	MsG0780040430.01	0.838075	3.567038e-57	4.724828e-54
MsG0280008392.01	MsG0780040431.01	0.827791	1.286778e-54	1.254986e-51
MsG0280008392.01	MsG0780040432.01	0.819405	1.181617e-52	9.084401e-50
MsG0280008392.01	MsG0780040846.01	0.854462	1.211144e-61	2.706945e-58
MsG0280008392.01	MsG0780040966.01	0.833515	5.102625e-56	5.889992e-53
MsG0280008392.01	MsG0780041259.01	0.858995	5.617317e-63	1.461090e-59
MsG0280008392.01	MsG0780041698.01	0.841800	3.814356e-58	5.667764e-55
MsG0280008392.01	MsG0780041699.01	0.829679	4.498640e-55	4.637019e-52
MsG0280008392.01	MsG0880041834.01	0.839523	1.505740e-57	2.084724e-54
MsG0280008392.01	MsG0880041858.01	0.860264	2.331636e-63	6.335058e-60
MsG0280008392.01	MsG0880042442.01	0.822562	2.216274e-53	1.861761e-50
MsG0280008392.01	MsG0880042732.01	0.818295	2.111452e-52	1.574250e-49
MsG0280008392.01	MsG0880042733.01	0.812916	3.332919e-51	2.145879e-48
MsG0280008392.01	MsG0880042958.01	0.829267	5.665033e-55	5.769707e-52
MsG0280008392.01	MsG0880042959.01	0.802404	5.701368e-49	2.790509e-46
MsG0280008392.01	MsG0880043037.01	0.828166	1.045391e-54	1.030917e-51
MsG0280008392.01	MsG0880043479.01	0.802228	6.197085e-49	3.019412e-46
MsG0280008392.01	MsG0880043979.01	0.807814	4.205053e-50	2.365182e-47
MsG0280008392.01	MsG0880044704.01	0.853122	2.944593e-61	6.294679e-58
MsG0280008392.01	MsG0880045177.01	0.828261	9.918890e-55	9.807810e-52
MsG0280008392.01	MsG0880045179.01	0.827675	1.372299e-54	1.333935e-51
MsG0280008392.01	MsG0880045495.01	0.815064	1.119529e-51	7.639734e-49
MsG0280008392.01	MsG0880045585.01	0.833544	5.017179e-56	5.796607e-53
MsG0280008392.01	MsG0880045586.01	0.828210	1.020269e-54	1.007436e-51
MsG0280008392.01	MsG0880045765.01	0.819316	1.238153e-52	9.494773e-50
MsG0280008392.01	MsG0880045953.01	0.804894	1.734987e-49	9.052579e-47
MsG0280008392.01	MsG0880047135.01	0.826942	2.056335e-54	1.956682e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008392.01.T01	MTR_2g041570	95.238	210	10	0	1	210	1	210	1.03e-144	402
MsG0280008392.01.T01	MTR_2g041580	94.762	210	11	0	1	210	1	210	1.30e-144	401
MsG0280008392.01.T01	MTR_2g041550	85.238	210	31	0	1	210	1	210	9.09e-129	361
MsG0280008392.01.T01	MTR_8g020590	64.423	208	74	0	3	210	1	208	2.23e-92	269
MsG0280008392.01.T01	MTR_8g020630	55.502	209	89	3	4	210	3	209	4.35e-79	236
MsG0280008392.01.T01	MTR_8g020650	56.995	193	81	2	18	210	19	209	2.82e-77	231
MsG0280008392.01.T01	MTR_8g020670	54.545	209	91	3	4	210	3	209	2.25e-76	229
MsG0280008392.01.T01	MTR_8g020610	51.442	208	95	2	7	210	2	207	1.69e-71	216
MsG0280008392.01.T01	MTR_2g044040	50.000	212	101	4	1	210	1	209	2.65e-70	213
MsG0280008392.01.T01	MTR_2g045100	50.718	209	99	3	4	210	3	209	4.28e-69	210
MsG0280008392.01.T01	MTR_3g019710	49.282	209	102	3	4	210	3	209	1.56e-66	204
MsG0280008392.01.T01	MTR_2g036120	50.000	208	100	3	4	209	3	208	3.66e-66	202
MsG0280008392.01.T01	MTR_3g019650	49.038	208	103	3	4	210	3	208	1.88e-65	201
MsG0280008392.01.T01	MTR_3g019680	49.038	208	103	3	4	210	3	208	7.36e-65	199
MsG0280008392.01.T01	MTR_8g020770	46.009	213	111	3	1	210	1	212	3.61e-62	192
MsG0280008392.01.T01	MTR_0284s0010	47.368	209	106	3	4	210	3	209	3.04e-61	190
MsG0280008392.01.T01	MTR_8g020750	46.479	213	110	3	1	210	1	212	3.37e-61	190
MsG0280008392.01.T01	MTR_4g010340	47.596	208	106	3	3	210	1	205	1.20e-60	189
MsG0280008392.01.T01	MTR_5g031460	45.498	211	112	3	1	210	1	209	7.71e-60	187
MsG0280008392.01.T01	MTR_7g011340	47.423	194	100	2	17	210	18	209	2.09e-58	183
MsG0280008392.01.T01	MTR_3g073170	43.721	215	111	5	1	210	1	210	5.87e-58	182
MsG0280008392.01.T01	MTR_8g020760	44.393	214	112	4	1	210	1	211	5.22e-57	179
MsG0280008392.01.T01	MTR_2g019780	42.396	217	113	5	1	210	1	212	5.98e-54	172
MsG0280008392.01.T01	MTR_3g019810	45.366	205	102	4	4	206	109	305	4.08e-51	167
MsG0280008392.01.T01	MTR_8g020763	40.782	179	105	1	32	210	13	190	2.69e-48	157
MsG0280008392.01.T01	MTR_2g031270	40.838	191	106	3	17	203	23	210	5.48e-42	141
MsG0280008392.01.T01	MTR_2g030855	40.426	188	105	3	20	203	25	209	8.57e-42	140
MsG0280008392.01.T01	MTR_1g079490	41.232	211	108	5	8	203	5	214	2.03e-41	140
MsG0280008392.01.T01	MTR_4g017050	40.566	212	109	5	7	203	4	213	4.29e-41	139
MsG0280008392.01.T01	MTR_5g046410	40.566	212	109	5	7	203	4	213	4.78e-41	139
MsG0280008392.01.T01	MTR_5g046430	40.566	212	109	5	7	203	4	213	4.78e-41	139
MsG0280008392.01.T01	MTR_4g017030	40.566	212	109	5	7	203	4	213	4.78e-41	139
MsG0280008392.01.T01	MTR_6g005310	39.720	214	114	5	3	203	1	212	7.76e-40	136
MsG0280008392.01.T01	MTR_1g112200	37.438	203	118	3	3	203	9	204	9.38e-40	135
MsG0280008392.01.T01	MTR_6g005360	39.720	214	114	5	3	203	1	212	1.32e-39	135
MsG0280008392.01.T01	MTR_2g019250	39.151	212	112	5	7	203	4	213	2.20e-39	135
MsG0280008392.01.T01	MTR_1g085140	40.107	187	110	1	23	207	30	216	2.67e-39	134
MsG0280008392.01.T01	MTR_6g005340	39.252	214	115	5	3	203	1	212	5.07e-39	134
MsG0280008392.01.T01	MTR_4g017040	39.151	212	112	5	7	203	4	213	5.20e-39	134
MsG0280008392.01.T01	MTR_7g111240	41.176	187	105	2	23	207	26	209	6.17e-39	133
MsG0280008392.01.T01	MTR_1g060120	41.317	167	97	1	40	206	56	221	1.11e-38	133
MsG0280008392.01.T01	MTR_7g111240	40.642	187	109	1	23	207	26	212	2.44e-38	132
MsG0280008392.01.T01	MTR_6g005330	40.654	214	114	6	1	203	1	212	7.90e-38	130
MsG0280008392.01.T01	MTR_1g023770	39.881	168	97	2	40	203	39	206	3.33e-37	129
MsG0280008392.01.T01	MTR_2g030895	40.828	169	95	3	40	203	7	175	8.00e-37	127
MsG0280008392.01.T01	MTR_2g072560	53.571	112	50	2	4	115	6	115	7.34e-36	123
MsG0280008392.01.T01	MTR_2g030865	40.237	169	96	3	40	203	7	175	1.33e-35	124
MsG0280008392.01.T01	MTR_4g027415	48.819	127	63	2	17	143	18	142	1.53e-35	122
MsG0280008392.01.T01	MTR_1g085500	36.612	183	114	1	23	203	29	211	1.19e-34	122
MsG0280008392.01.T01	MTR_5g036570	36.508	189	117	2	23	208	33	221	3.82e-34	121
MsG0280008392.01.T01	MTR_6g005350	38.172	186	108	4	23	203	28	211	2.24e-31	114
MsG0280008392.01.T01	MTR_6g005380	38.095	189	108	4	14	195	19	205	2.99e-31	114
MsG0280008392.01.T01	MTR_3g019610	52.427	103	47	2	4	106	6	106	2.23e-30	108
MsG0280008392.01.T01	MTR_2g031300	50.000	106	51	1	40	143	7	112	2.47e-29	107
MsG0280008392.01.T01	MTR_3g096330	34.951	206	119	4	1	193	551	754	3.33e-29	114
MsG0280008392.01.T01	MTR_8g007300	35.393	178	102	5	3	169	4	179	5.05e-29	108
MsG0280008392.01.T01	MTR_2g086630	33.010	206	122	5	2	203	8	201	3.63e-25	97.8
MsG0280008392.01.T01	MTR_2g086620	33.010	206	122	5	2	203	8	201	4.21e-25	97.8
MsG0280008392.01.T01	MTR_2g086640	32.524	206	123	5	2	203	7	200	2.13e-24	95.9
MsG0280008392.01.T01	MTR_4g052780	33.333	129	85	1	76	203	74	202	8.59e-18	78.6
MsG0280008392.01.T01	MTR_4g052770	33.333	129	85	1	76	203	74	202	1.20e-17	78.2
MsG0280008392.01.T01	MTR_2g096110	29.921	127	73	2	43	168	6	117	3.67e-16	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008392.01.T01	AT5G20630	64.762	210	73	1	1	209	1	210	9.27e-94	273
MsG0280008392.01.T01	AT1G72610	63.942	208	75	0	3	210	1	208	2.30e-87	256
MsG0280008392.01.T01	AT5G39160	43.684	190	99	3	23	207	30	216	3.80e-44	147
MsG0280008392.01.T01	AT3G04200	45.833	192	96	5	23	207	33	223	1.75e-43	145
MsG0280008392.01.T01	AT5G39190	43.979	191	101	3	23	207	30	220	2.23e-43	145
MsG0280008392.01.T01	AT5G39160	43.979	191	101	3	23	207	30	220	2.32e-43	145
MsG0280008392.01.T01	AT5G39130	43.455	191	102	3	23	207	30	220	6.92e-43	144
MsG0280008392.01.T01	AT5G39110	40.394	203	110	4	13	204	16	218	5.58e-40	136
MsG0280008392.01.T01	AT1G18970	38.647	207	121	3	1	203	11	215	6.28e-40	136
MsG0280008392.01.T01	AT5G39120	38.967	213	121	4	1	204	5	217	7.66e-40	136
MsG0280008392.01.T01	AT1G18980	39.901	203	117	3	3	203	16	215	8.31e-40	136
MsG0280008392.01.T01	AT3G62020	37.073	205	119	3	9	203	8	212	2.31e-39	135
MsG0280008392.01.T01	AT3G05950	42.781	187	101	3	23	203	32	218	3.70e-39	134
MsG0280008392.01.T01	AT1G02335	35.122	205	131	1	5	207	12	216	5.51e-39	134
MsG0280008392.01.T01	AT5G38960	41.327	196	100	5	23	207	32	223	6.20e-39	134
MsG0280008392.01.T01	AT3G04150	41.538	195	106	4	23	210	32	225	1.12e-38	133
MsG0280008392.01.T01	AT5G39150	38.140	215	122	4	1	204	3	217	1.92e-38	132
MsG0280008392.01.T01	AT5G39180	38.140	215	122	4	1	204	3	217	3.51e-38	132
MsG0280008392.01.T01	AT3G04150	41.899	179	99	2	37	210	60	238	5.90e-38	132
MsG0280008392.01.T01	AT5G61750	39.106	179	93	3	1	169	1	173	2.04e-37	129
MsG0280008392.01.T01	AT5G26700	36.634	202	122	3	3	203	10	206	4.23e-37	129
MsG0280008392.01.T01	AT4G14630	39.894	188	106	3	23	203	32	219	5.92e-37	129
MsG0280008392.01.T01	AT3G05930	37.981	208	125	3	1	204	6	213	1.01e-36	128
MsG0280008392.01.T01	AT1G09560	44.444	162	90	0	23	184	30	191	1.19e-36	128
MsG0280008392.01.T01	AT3G04190	40.314	191	106	4	23	206	32	221	1.27e-36	128
MsG0280008392.01.T01	AT5G39190	44.304	158	83	2	55	207	41	198	1.74e-36	127
MsG0280008392.01.T01	AT3G04180	41.667	192	102	6	23	206	32	221	1.79e-36	127
MsG0280008392.01.T01	AT5G39160	44.304	158	83	2	55	207	41	198	1.92e-36	127
MsG0280008392.01.T01	AT5G38940	45.695	151	78	2	23	169	32	182	3.70e-36	127
MsG0280008392.01.T01	AT3G62020	38.235	170	102	2	37	203	14	183	5.06e-36	125
MsG0280008392.01.T01	AT5G38940	44.516	155	82	2	19	169	52	206	6.12e-36	127
MsG0280008392.01.T01	AT5G38930	40.107	187	106	3	23	203	32	218	1.98e-35	125
MsG0280008392.01.T01	AT3G10080	38.857	175	101	2	21	190	30	203	2.03e-35	125
MsG0280008392.01.T01	AT3G10080	38.857	175	101	2	21	190	101	274	7.43e-35	125
MsG0280008392.01.T01	AT3G04170	40.314	191	103	5	23	206	32	218	7.63e-34	120
MsG0280008392.01.T01	AT5G38910	44.134	179	88	5	14	182	17	193	1.67e-33	120
MsG0280008392.01.T01	AT1G10460	35.233	193	118	4	23	208	25	217	1.52e-31	114
MsG0280008392.01.T01	AT1G74820	34.300	207	130	3	1	203	18	222	1.68e-30	112
MsG0280008392.01.T01	AT5G38910	33.862	189	74	6	4	182	9	156	2.31e-14	68.9

Find 50 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAACCACCAACATTAATT+TGG	0.165752	2:+30597194	None:intergenic
GAAGTATTGGTTGTTATTAA+AGG	0.278056	2:-30597316	MsG0280008392.01.T01:CDS
AAGAAGCTTAAGGGTGTTCT+TGG	0.328993	2:-30597043	MsG0280008392.01.T01:CDS
GAATATCCAGCCGGGCCATT+TGG	0.346876	2:+30597547	None:intergenic
ATAATGTTTGTGGTGTTTCC+AGG	0.357728	2:+30597466	None:intergenic
TAATCCTCGTCTACAGATAT+TGG	0.405016	2:-30597140	MsG0280008392.01.T01:CDS
AAGGGTGTTCTTGGAGGTAG+TGG	0.422600	2:-30597034	MsG0280008392.01.T01:CDS
TCACAATTTCCCGGTGTAAA+CGG	0.422953	2:-30597415	MsG0280008392.01.T01:CDS
CCCCGGTGCTTCGGAAGTAT+TGG	0.434736	2:-30597329	MsG0280008392.01.T01:CDS
TTTCCCGGTGTAAACGGTCT+TGG	0.446321	2:-30597409	MsG0280008392.01.T01:CDS
CATTTCCAAATTAATGTTGG+TGG	0.455196	2:-30597199	MsG0280008392.01.T01:CDS
AATGCACCAAATGGCCCGGC+TGG	0.461203	2:-30597553	MsG0280008392.01.T01:CDS
AACCAATACTTCCGAAGCAC+CGG	0.468211	2:+30597327	None:intergenic
TCACACACACCCCGGTGCTT+CGG	0.471434	2:-30597338	MsG0280008392.01.T01:CDS
TGGTGTTTCCAGGTGCGGCT+AGG	0.473117	2:+30597476	None:intergenic
TTCCAGGTGCGGCTAGGCCG+TGG	0.474288	2:+30597482	None:intergenic
GGCTATATCTAAACGCGCAA+TGG	0.475785	2:+30597381	None:intergenic
TACCACGGCCTAGCCGCACC+TGG	0.482390	2:-30597484	MsG0280008392.01.T01:CDS
GCATTAGACTCACAATTTCC+CGG	0.483529	2:-30597424	MsG0280008392.01.T01:CDS
AAGCTTAAGGGTGTTCTTGG+AGG	0.489760	2:-30597040	MsG0280008392.01.T01:CDS
TGCTGTAGTGAAGAAGCTTA+AGG	0.492145	2:-30597053	MsG0280008392.01.T01:CDS
ATTAAAGGAACAATCAGTGC+TGG	0.495019	2:-30597301	MsG0280008392.01.T01:CDS
AGCGGCTTTGATAATGTTTG+TGG	0.500309	2:+30597456	None:intergenic
GCTGTAGTGAAGAAGCTTAA+GGG	0.505860	2:-30597052	MsG0280008392.01.T01:CDS
ACCAATACTTCCGAAGCACC+GGG	0.531532	2:+30597328	None:intergenic
GCAGATTACAATGCACCAAA+TGG	0.532463	2:-30597562	MsG0280008392.01.T01:CDS
CGTTTAGATATAGCCGTTGG+TGG	0.560060	2:-30597373	MsG0280008392.01.T01:CDS
TTGCATTTCCAAATTAATGT+TGG	0.570619	2:-30597202	MsG0280008392.01.T01:CDS
TTACAATGCACCAAATGGCC+CGG	0.571769	2:-30597557	MsG0280008392.01.T01:CDS
CTACTACTGATGCATGAGCA+AGG	0.573654	2:+30597596	None:intergenic
AACGTAAACAACATTGTCAG+AGG	0.574065	2:+30597270	None:intergenic
GCGCGTTTAGATATAGCCGT+TGG	0.596899	2:-30597376	MsG0280008392.01.T01:CDS
ATTCCAAGACCGTTTACACC+GGG	0.600502	2:+30597406	None:intergenic
TGGAAATGCAACAATCCTTG+TGG	0.601071	2:+30597214	None:intergenic
GGTTTGCAAGAATATCCAGC+CGG	0.602375	2:+30597538	None:intergenic
TACTACTGATGCATGAGCAA+GGG	0.604416	2:+30597597	None:intergenic
GTTTGTGGTGTTTCCAGGTG+CGG	0.608586	2:+30597471	None:intergenic
TACGTTAAAACACTTCACAA+AGG	0.611341	2:-30597253	MsG0280008392.01.T01:CDS
GATTCCAAGACCGTTTACAC+CGG	0.616073	2:+30597405	None:intergenic
GCACCGGGGTGTGTGTGAAG+TGG	0.618194	2:+30597343	None:intergenic
GTTTGCAAGAATATCCAGCC+GGG	0.622259	2:+30597539	None:intergenic
GTGGTAGACGAAGTCATTCG+CGG	0.625632	2:+30597501	None:intergenic
AAGTGGAATAACACCACCAA+CGG	0.630116	2:+30597360	None:intergenic
GTCTAATGCGGTGGTAACAG+CGG	0.634535	2:+30597438	None:intergenic
ATTCCACTTCACACACACCC+CGG	0.641125	2:-30597346	MsG0280008392.01.T01:CDS
TAATCCAATATCTGTAGACG+AGG	0.678147	2:+30597136	None:intergenic
GGGAAATTGTGAGTCTAATG+CGG	0.678656	2:+30597426	None:intergenic
AAATTGTGAGTCTAATGCGG+TGG	0.693385	2:+30597429	None:intergenic
GCGAATGACTTCGTCTACCA+CGG	0.705558	2:-30597499	MsG0280008392.01.T01:CDS
CCAATACTTCCGAAGCACCG+GGG	0.761220	2:+30597329	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTGCATTTCCAAATTAATGT+TGG	-	Chr2:30597468-30597487	MsG0280008392.01.T01:CDS	25.0%
!!!	GAAGTATTGGTTGTTATTAA+AGG	-	Chr2:30597354-30597373	MsG0280008392.01.T01:CDS	25.0%
	CATTTCCAAATTAATGTTGG+TGG	-	Chr2:30597471-30597490	MsG0280008392.01.T01:CDS	30.0%
	TACGTTAAAACACTTCACAA+AGG	-	Chr2:30597417-30597436	MsG0280008392.01.T01:CDS	30.0%
	TAGAACCACCAACATTAATT+TGG	+	Chr2:30597479-30597498	None:intergenic	30.0%
!	GATGTTATGATTTTTCCACA+AGG	-	Chr2:30597441-30597460	MsG0280008392.01.T01:CDS	30.0%
!!	GTTTTAGTAATCAACTCAGT+TGG	+	Chr2:30597582-30597601	None:intergenic	30.0%
	AACGTAAACAACATTGTCAG+AGG	+	Chr2:30597403-30597422	None:intergenic	35.0%
	ATAATGTTTGTGGTGTTTCC+AGG	+	Chr2:30597207-30597226	None:intergenic	35.0%
	ATTAAAGGAACAATCAGTGC+TGG	-	Chr2:30597369-30597388	MsG0280008392.01.T01:CDS	35.0%
	TAATCCAATATCTGTAGACG+AGG	+	Chr2:30597537-30597556	None:intergenic	35.0%
	TAATCCTCGTCTACAGATAT+TGG	-	Chr2:30597530-30597549	MsG0280008392.01.T01:CDS	35.0%
	AAATTGTGAGTCTAATGCGG+TGG	+	Chr2:30597244-30597263	None:intergenic	40.0%
	AAGTGGAATAACACCACCAA+CGG	+	Chr2:30597313-30597332	None:intergenic	40.0%
	GCAGATTACAATGCACCAAA+TGG	-	Chr2:30597108-30597127	MsG0280008392.01.T01:CDS	40.0%
	GCATTAGACTCACAATTTCC+CGG	-	Chr2:30597246-30597265	MsG0280008392.01.T01:CDS	40.0%
	GCTGTAGTGAAGAAGCTTAA+GGG	-	Chr2:30597618-30597637	MsG0280008392.01.T01:CDS	40.0%
	GGGAAATTGTGAGTCTAATG+CGG	+	Chr2:30597247-30597266	None:intergenic	40.0%
	TACTACTGATGCATGAGCAA+GGG	+	Chr2:30597076-30597095	None:intergenic	40.0%
	TCACAATTTCCCGGTGTAAA+CGG	-	Chr2:30597255-30597274	MsG0280008392.01.T01:CDS	40.0%
	TGCTGTAGTGAAGAAGCTTA+AGG	-	Chr2:30597617-30597636	MsG0280008392.01.T01:CDS	40.0%
	TGGAAATGCAACAATCCTTG+TGG	+	Chr2:30597459-30597478	None:intergenic	40.0%
!!	AAGAAGCTTAAGGGTGTTCT+TGG	-	Chr2:30597627-30597646	MsG0280008392.01.T01:CDS	40.0%
!!	AGCGGCTTTGATAATGTTTG+TGG	+	Chr2:30597217-30597236	None:intergenic	40.0%
!!!	TCATTCGCGGTTACTTTTGA+TGG	+	Chr2:30597159-30597178	None:intergenic	40.0%
	AACCAATACTTCCGAAGCAC+CGG	+	Chr2:30597346-30597365	None:intergenic	45.0%
	ATTCCAAGACCGTTTACACC+GGG	+	Chr2:30597267-30597286	None:intergenic	45.0%
	CGTTTAGATATAGCCGTTGG+TGG	-	Chr2:30597297-30597316	MsG0280008392.01.T01:CDS	45.0%
	CTACTACTGATGCATGAGCA+AGG	+	Chr2:30597077-30597096	None:intergenic	45.0%
	GATTCCAAGACCGTTTACAC+CGG	+	Chr2:30597268-30597287	None:intergenic	45.0%
	GGCTATATCTAAACGCGCAA+TGG	+	Chr2:30597292-30597311	None:intergenic	45.0%
	GGTTTGCAAGAATATCCAGC+CGG	+	Chr2:30597135-30597154	None:intergenic	45.0%
	GTTTGCAAGAATATCCAGCC+GGG	+	Chr2:30597134-30597153	None:intergenic	45.0%
	TTACAATGCACCAAATGGCC+CGG	-	Chr2:30597113-30597132	MsG0280008392.01.T01:CDS	45.0%
!!	AAGCTTAAGGGTGTTCTTGG+AGG	-	Chr2:30597630-30597649	MsG0280008392.01.T01:CDS	45.0%
!!!	TTCGCGGTTACTTTTGATGG+TGG	+	Chr2:30597156-30597175	None:intergenic	45.0%
	ATTCCACTTCACACACACCC+CGG	-	Chr2:30597324-30597343	MsG0280008392.01.T01:CDS	50.0%
	GCGAATGACTTCGTCTACCA+CGG	-	Chr2:30597171-30597190	MsG0280008392.01.T01:CDS	50.0%
	GCGCGTTTAGATATAGCCGT+TGG	-	Chr2:30597294-30597313	MsG0280008392.01.T01:CDS	50.0%
	GTCTAATGCGGTGGTAACAG+CGG	+	Chr2:30597235-30597254	None:intergenic	50.0%
	GTGGTAGACGAAGTCATTCG+CGG	+	Chr2:30597172-30597191	None:intergenic	50.0%
	GTTTGTGGTGTTTCCAGGTG+CGG	+	Chr2:30597202-30597221	None:intergenic	50.0%
	TTTCCCGGTGTAAACGGTCT+TGG	-	Chr2:30597261-30597280	MsG0280008392.01.T01:CDS	50.0%
!	ACCAATACTTCCGAAGCACC+GGG	+	Chr2:30597345-30597364	None:intergenic	50.0%
!!	AAGGGTGTTCTTGGAGGTAG+TGG	-	Chr2:30597636-30597655	MsG0280008392.01.T01:CDS	50.0%
	GAATATCCAGCCGGGCCATT+TGG	+	Chr2:30597126-30597145	None:intergenic	55.0%
!!	CCAATACTTCCGAAGCACCG+GGG	+	Chr2:30597344-30597363	None:intergenic	55.0%
	AATGCACCAAATGGCCCGGC+TGG	-	Chr2:30597117-30597136	MsG0280008392.01.T01:CDS	60.0%
	TCACACACACCCCGGTGCTT+CGG	-	Chr2:30597332-30597351	MsG0280008392.01.T01:CDS	60.0%
	TGGTGTTTCCAGGTGCGGCT+AGG	+	Chr2:30597197-30597216	None:intergenic	60.0%
!	CCCCGGTGCTTCGGAAGTAT+TGG	-	Chr2:30597341-30597360	MsG0280008392.01.T01:CDS	60.0%
	GCACCGGGGTGTGTGTGAAG+TGG	+	Chr2:30597330-30597349	None:intergenic	65.0%
	TACCACGGCCTAGCCGCACC+TGG	-	Chr2:30597186-30597205	MsG0280008392.01.T01:CDS	70.0%
	TTCCAGGTGCGGCTAGGCCG+TGG	+	Chr2:30597191-30597210	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	30597030	30597662	30597030	ID=MsG0280008392.01;Name=MsG0280008392.01
Chr2	mRNA	30597030	30597662	30597030	ID=MsG0280008392.01.T01;Parent=MsG0280008392.01;Name=MsG0280008392.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|210
Chr2	exon	30597030	30597662	30597030	ID=MsG0280008392.01.T01:exon:5920;Parent=MsG0280008392.01.T01
Chr2	CDS	30597030	30597662	30597030	ID=MsG0280008392.01.T01:cds;Parent=MsG0280008392.01.T01

Gene Sequence

>MsG0280008392.01.T01

ATGAAGATGATTCTAACTATCTTCTTCATTTTTTCTCTTCTATCCCTTGCTCATGCATCAGTAGTAGATTTCTGCGTAGCAGATTACAATGCACCAAATGGCCCGGCTGGATATTCTTGCAAACCACCATCAAAAGTAACCGCGAATGACTTCGTCTACCACGGCCTAGCCGCACCTGGAAACACCACAAACATTATCAAAGCCGCTGTTACCACCGCATTAGACTCACAATTTCCCGGTGTAAACGGTCTTGGAATCTCCATTGCGCGTTTAGATATAGCCGTTGGTGGTGTTATTCCACTTCACACACACCCCGGTGCTTCGGAAGTATTGGTTGTTATTAAAGGAACAATCAGTGCTGGTTTTGTTTCCTCTGACAATGTTGTTTACGTTAAAACACTTCACAAAGGTGATGTTATGATTTTTCCACAAGGATTGTTGCATTTCCAAATTAATGTTGGTGGTTCTAATGCACTTACTTTTAATAGCTTTAGTAGTGCTAATCCTCGTCTACAGATATTGGATTACGCTTTGTTTAAAAGCGATTTTCCAACTGAGTTGATTACTAAAACTACTTTTATTGATGCTGCTGTAGTGAAGAAGCTTAAGGGTGTTCTTGGAGGTAGTGGTTAA

Protein sequence

>MsG0280008392.01.T01

MKMILTIFFIFSLLSLAHASVVDFCVADYNAPNGPAGYSCKPPSKVTANDFVYHGLAAPGNTTNIIKAAVTTALDSQFPGVNGLGISIARLDIAVGGVIPLHTHPGASEVLVVIKGTISAGFVSSDNVVYVKTLHKGDVMIFPQGLLHFQINVGGSNALTFNSFSSANPRLQILDYALFKSDFPTELITKTTFIDAAVVKKLKGVLGGSG*