AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046186.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046186.01.T01 MTR_4g102380 98.162 272 5 0 1 272 1 272 0.0 553
MsG0880046186.01.T01 MTR_5g078140 57.658 222 78 3 1 207 1 221 1.35e-85 258
MsG0880046186.01.T01 MTR_3g065440 62.617 214 71 3 1 206 1 213 4.93e-84 254
MsG0880046186.01.T01 MTR_6g012690 64.000 150 53 1 1 149 1 150 1.07e-66 211
MsG0880046186.01.T01 MTR_7g011170 67.939 131 42 0 1 131 1 131 1.15e-66 210
MsG0880046186.01.T01 MTR_4g082290 65.541 148 49 1 1 148 1 146 7.28e-66 211
MsG0880046186.01.T01 MTR_3g074520 69.531 128 39 0 1 128 1 128 1.19e-65 208
MsG0880046186.01.T01 MTR_8g031360 72.519 131 34 2 1 129 1 131 3.26e-65 206
MsG0880046186.01.T01 MTR_4g478180 68.750 128 40 0 1 128 2 129 8.22e-65 206
MsG0880046186.01.T01 MTR_4g073420 61.644 146 56 0 1 146 1 146 3.70e-64 202
MsG0880046186.01.T01 MTR_7g076740 70.000 130 38 1 1 129 1 130 4.87e-64 203
MsG0880046186.01.T01 MTR_5g029840 68.750 128 40 0 1 128 1 128 9.52e-64 203
MsG0880046186.01.T01 MTR_2g011660 68.217 129 40 1 1 128 1 129 1.44e-63 203
MsG0880046186.01.T01 MTR_4g091490 67.442 129 41 1 1 128 1 129 3.12e-63 202
MsG0880046186.01.T01 MTR_2g089620 67.969 128 41 0 1 128 1 128 1.39e-62 200
MsG0880046186.01.T01 MTR_4g082230 62.838 148 53 1 1 148 1 146 4.01e-62 201
MsG0880046186.01.T01 MTR_3g097450 60.265 151 57 1 1 151 1 148 8.75e-62 197
MsG0880046186.01.T01 MTR_1g085040 57.692 156 66 0 1 156 1 156 1.95e-61 198
MsG0880046186.01.T01 MTR_5g079670 54.878 164 71 2 3 166 2 162 3.91e-61 192
MsG0880046186.01.T01 MTR_8g095390 65.116 129 45 0 1 129 1 129 1.34e-60 194
MsG0880046186.01.T01 MTR_3g461490 59.441 143 58 0 1 143 1 143 3.93e-59 191
MsG0880046186.01.T01 MTR_5g007370 63.281 128 47 0 1 128 1 128 6.58e-59 189
MsG0880046186.01.T01 MTR_7g110830 47.668 193 94 2 1 191 1 188 9.37e-59 191
MsG0880046186.01.T01 MTR_6g009430 58.389 149 61 1 1 149 1 148 1.49e-58 190
MsG0880046186.01.T01 MTR_3g077110 62.791 129 48 0 1 129 1 129 2.04e-58 190
MsG0880046186.01.T01 MTR_4g105130 48.438 192 77 1 1 192 1 170 2.79e-58 190
MsG0880046186.01.T01 MTR_1g085640 52.514 179 78 2 1 172 1 179 2.91e-58 191
MsG0880046186.01.T01 MTR_1g112760 63.780 127 46 0 3 129 4 130 1.10e-57 184
MsG0880046186.01.T01 MTR_3g083540 64.800 125 44 0 5 129 34 158 3.46e-56 182
MsG0880046186.01.T01 MTR_2g064160 64.341 129 45 1 1 129 1 128 4.86e-56 182
MsG0880046186.01.T01 MTR_7g096930 68.103 116 37 0 1 116 1 116 1.39e-55 180
MsG0880046186.01.T01 MTR_7g111290 61.429 140 51 1 1 140 1 137 4.56e-55 182
MsG0880046186.01.T01 MTR_4g485530 60.000 145 51 2 3 140 2 146 2.97e-54 174
MsG0880046186.01.T01 MTR_7g115650 47.283 184 89 2 1 183 1 177 7.26e-54 174
MsG0880046186.01.T01 MTR_4g121460 51.497 167 73 2 1 159 1 167 8.72e-54 177
MsG0880046186.01.T01 MTR_1g076150 65.517 116 40 0 1 116 1 116 1.01e-53 175
MsG0880046186.01.T01 MTR_2g034790 45.918 196 97 3 1 194 1 189 1.09e-53 177
MsG0880046186.01.T01 MTR_8g017440 56.944 144 56 1 1 138 1 144 3.15e-53 176
MsG0880046186.01.T01 MTR_1g043050 41.778 225 105 3 1 218 1 206 5.55e-53 173
MsG0880046186.01.T01 MTR_7g010210 66.949 118 39 0 1 118 1 118 1.11e-52 174
MsG0880046186.01.T01 MTR_7g010210 66.949 118 39 0 1 118 1 118 2.48e-52 172
MsG0880046186.01.T01 MTR_1g043080 63.248 117 43 0 1 117 1 117 4.07e-52 171
MsG0880046186.01.T01 MTR_7g117730 62.931 116 43 0 1 116 1 116 4.23e-52 171
MsG0880046186.01.T01 MTR_1g100653 62.931 116 43 0 1 116 1 116 1.01e-51 171
MsG0880046186.01.T01 MTR_8g027345 62.931 116 43 0 1 116 1 116 1.29e-51 171
MsG0880046186.01.T01 MTR_2g099740 60.976 123 48 0 1 123 1 123 1.84e-51 173
MsG0880046186.01.T01 MTR_0140s0030 63.559 118 43 0 1 118 2 119 1.97e-51 171
MsG0880046186.01.T01 MTR_0489s0020 63.559 118 43 0 1 118 2 119 1.97e-51 171
MsG0880046186.01.T01 MTR_8g017540 62.602 123 46 0 1 123 47 169 2.18e-51 173
MsG0880046186.01.T01 MTR_5g042030 62.185 119 45 0 10 128 5 123 3.33e-51 169
MsG0880046186.01.T01 MTR_8g017500 40.650 246 118 6 1 240 1 224 7.17e-51 170
MsG0880046186.01.T01 MTR_8g098860 62.712 118 44 0 1 118 1 118 7.48e-51 169
MsG0880046186.01.T01 MTR_8g017390 65.254 118 40 1 1 117 1 118 9.55e-51 173
MsG0880046186.01.T01 MTR_0008s0470 49.068 161 73 3 1 160 1 153 1.45e-50 168
MsG0880046186.01.T01 MTR_4g125520 64.655 116 41 0 1 116 1 116 2.44e-50 168
MsG0880046186.01.T01 MTR_0008s0390 61.864 118 44 1 1 117 1 118 2.53e-50 167
MsG0880046186.01.T01 MTR_2g067420 68.182 110 35 0 2 111 4 113 2.96e-50 168
MsG0880046186.01.T01 MTR_2g089450 61.864 118 45 0 1 118 1 118 3.23e-50 166
MsG0880046186.01.T01 MTR_7g087130 53.247 154 66 1 1 154 1 148 3.63e-50 168
MsG0880046186.01.T01 MTR_3g039990 41.379 232 93 4 1 231 2 191 3.95e-50 167
MsG0880046186.01.T01 MTR_8g017340 61.290 124 47 1 1 123 1 124 5.30e-50 171
MsG0880046186.01.T01 MTR_1g017000 40.553 217 95 5 1 183 1 217 2.88e-49 163
MsG0880046186.01.T01 MTR_0251s0050 60.684 117 45 1 1 116 1 117 3.88e-49 164
MsG0880046186.01.T01 MTR_8g017350 60.484 124 48 1 1 123 1 124 8.83e-49 171
MsG0880046186.01.T01 MTR_2g089420 61.017 118 45 1 1 118 1 117 1.64e-48 167
MsG0880046186.01.T01 MTR_5g010020 61.818 110 42 0 1 110 1 110 2.16e-47 161
MsG0880046186.01.T01 MTR_2g097910 55.556 135 50 1 12 146 20 144 6.84e-47 159
MsG0880046186.01.T01 MTR_7g109320 61.345 119 46 0 1 119 1 119 7.95e-47 160
MsG0880046186.01.T01 MTR_4g065017 55.303 132 51 1 12 143 17 140 1.02e-46 159
MsG0880046186.01.T01 MTR_5g014990 59.322 118 47 1 1 117 1 118 1.21e-46 158
MsG0880046186.01.T01 MTR_3g103570 52.667 150 69 2 1 148 1 150 1.56e-46 159
MsG0880046186.01.T01 MTR_4g057635 53.906 128 58 1 1 127 1 128 1.94e-46 158
MsG0880046186.01.T01 MTR_1g017140 59.322 118 47 1 1 117 1 118 2.77e-46 158
MsG0880046186.01.T01 MTR_6g012180 62.162 111 42 0 1 111 1 111 3.24e-46 157
MsG0880046186.01.T01 MTR_0063s0090 45.902 183 89 4 1 174 1 182 4.80e-46 154
MsG0880046186.01.T01 MTR_0008s0280 58.772 114 47 0 1 114 1 114 7.59e-46 154
MsG0880046186.01.T01 MTR_1g073170 66.019 103 35 0 13 115 21 123 9.13e-46 154
MsG0880046186.01.T01 MTR_7g102110 56.667 120 51 1 1 119 1 120 3.29e-45 153
MsG0880046186.01.T01 MTR_3g028740 60.550 109 43 0 8 116 18 126 7.12e-45 154
MsG0880046186.01.T01 MTR_1g045610 65.049 103 36 0 13 115 22 124 1.30e-44 151
MsG0880046186.01.T01 MTR_6g055910 51.049 143 67 2 1 141 1 142 2.03e-44 152
MsG0880046186.01.T01 MTR_6g090405 56.780 118 50 1 1 117 1 118 4.58e-44 150
MsG0880046186.01.T01 MTR_2g095520 59.459 111 44 1 1 110 1 111 1.04e-43 151
MsG0880046186.01.T01 MTR_4g128670 60.360 111 43 1 1 110 1 111 1.75e-43 151
MsG0880046186.01.T01 MTR_7g035075 60.952 105 41 0 12 116 14 118 6.37e-43 145
MsG0880046186.01.T01 MTR_4g097570 59.091 110 44 1 1 109 1 110 1.07e-42 147
MsG0880046186.01.T01 MTR_6g006030 56.780 118 49 1 1 116 1 118 2.19e-42 144
MsG0880046186.01.T01 MTR_1g086510 58.929 112 46 0 11 122 20 131 2.70e-42 145
MsG0880046186.01.T01 MTR_4g063100 61.165 103 40 0 13 115 8 110 4.16e-42 145
MsG0880046186.01.T01 MTR_2g096380 53.175 126 56 1 12 134 6 131 4.45e-42 144
MsG0880046186.01.T01 MTR_1g100667 56.303 119 51 1 1 118 1 119 5.34e-42 145
MsG0880046186.01.T01 MTR_4g097570 58.559 111 44 2 1 109 1 111 9.17e-42 145
MsG0880046186.01.T01 MTR_8g042410 60.577 104 41 0 12 115 37 140 1.04e-41 150
MsG0880046186.01.T01 MTR_1g110460 55.856 111 49 0 12 122 26 136 1.90e-41 145
MsG0880046186.01.T01 MTR_1g086530 53.913 115 53 0 8 122 29 143 2.46e-41 144
MsG0880046186.01.T01 MTR_3g052450 56.481 108 47 0 8 115 36 143 1.31e-40 147
MsG0880046186.01.T01 MTR_3g045430 50.758 132 64 1 1 131 1 132 3.07e-40 141
MsG0880046186.01.T01 MTR_3g052430 58.654 104 43 0 12 115 41 144 3.24e-40 146
MsG0880046186.01.T01 MTR_1g062940 58.095 105 44 0 12 116 6 110 4.00e-40 139
MsG0880046186.01.T01 MTR_4g100720 51.908 131 58 1 12 142 13 138 1.55e-39 136
MsG0880046186.01.T01 MTR_3g011610 56.731 104 45 0 12 115 37 140 3.28e-39 143
MsG0880046186.01.T01 MTR_8g020490 57.009 107 46 0 12 118 8 114 2.19e-38 135
MsG0880046186.01.T01 MTR_1g021230 55.769 104 46 0 12 115 57 160 1.22e-37 138
MsG0880046186.01.T01 MTR_2g033170 53.913 115 53 0 8 122 20 134 3.21e-37 134
MsG0880046186.01.T01 MTR_5g079120 35.961 203 124 2 8 210 57 253 8.53e-37 132
MsG0880046186.01.T01 MTR_5g079290 56.075 107 47 0 11 117 16 122 1.31e-36 131
MsG0880046186.01.T01 MTR_5g079220 53.153 111 52 0 7 117 16 126 3.63e-36 130
MsG0880046186.01.T01 MTR_7g111290 68.966 87 27 0 43 129 1 87 4.66e-36 131
MsG0880046186.01.T01 MTR_0197s0010 59.406 101 41 0 16 116 5 105 6.26e-36 128
MsG0880046186.01.T01 MTR_0001s0360 38.756 209 110 4 11 210 6 205 1.42e-35 128
MsG0880046186.01.T01 MTR_4g123040 55.140 107 48 0 8 114 20 126 3.54e-35 129
MsG0880046186.01.T01 MTR_7g017260 53.636 110 49 1 10 117 23 132 3.84e-35 127
MsG0880046186.01.T01 MTR_2g088170 55.140 107 48 0 9 115 26 132 4.38e-35 131
MsG0880046186.01.T01 MTR_0247s0040 54.369 103 47 0 11 113 6 108 2.19e-34 122
MsG0880046186.01.T01 MTR_8g060940 55.882 102 45 0 11 112 6 107 9.41e-34 123
MsG0880046186.01.T01 MTR_5g078910 53.774 106 49 0 12 117 7 112 1.27e-33 124
MsG0880046186.01.T01 MTR_0193s0090 39.506 162 97 1 11 171 6 167 1.73e-33 121
MsG0880046186.01.T01 MTR_5g078800 53.271 107 50 0 11 117 6 112 4.02e-33 122
MsG0880046186.01.T01 MTR_5g078930 53.398 103 48 0 13 115 10 112 1.29e-32 119
MsG0880046186.01.T01 MTR_5g078860 52.336 107 51 0 11 117 6 112 2.09e-32 121
MsG0880046186.01.T01 MTR_5g088080 38.462 182 108 3 12 190 12 192 2.16e-32 120
MsG0880046186.01.T01 MTR_5g088150 38.462 182 108 3 12 190 12 192 2.16e-32 120
MsG0880046186.01.T01 MTR_5g488210 38.462 182 108 3 12 190 12 192 2.16e-32 120
MsG0880046186.01.T01 MTR_5g488170 38.462 182 108 3 12 190 12 192 3.30e-32 119
MsG0880046186.01.T01 MTR_5g078950 54.369 103 47 0 11 113 6 108 5.05e-32 119
MsG0880046186.01.T01 MTR_5g088640 45.985 137 70 3 12 145 12 147 5.75e-32 119
MsG0880046186.01.T01 MTR_4g063100 68.493 73 23 0 43 115 9 81 9.19e-32 117
MsG0880046186.01.T01 MTR_6g055910 54.545 99 44 1 43 141 16 113 1.24e-31 117
MsG0880046186.01.T01 MTR_1g083630 50.000 114 56 1 8 121 8 120 3.48e-31 122
MsG0880046186.01.T01 MTR_5g062790 48.276 116 58 2 10 124 7 121 5.09e-31 117
MsG0880046186.01.T01 MTR_2g096380 55.789 95 39 1 43 134 18 112 2.21e-30 113
MsG0880046186.01.T01 MTR_5g007300 56.818 88 38 0 1 88 53 140 2.23e-30 111
MsG0880046186.01.T01 MTR_8g006470 48.148 108 55 1 8 114 6 113 1.32e-28 110
MsG0880046186.01.T01 MTR_5g070020 52.577 97 43 2 14 109 122 216 2.13e-28 111
MsG0880046186.01.T01 MTR_3g463400 44.444 117 61 3 1 115 119 233 1.14e-27 110
MsG0880046186.01.T01 MTR_5g049190 37.264 212 117 9 8 207 13 220 1.24e-27 107
MsG0880046186.01.T01 MTR_4g029540 41.221 131 73 2 12 141 10 137 8.61e-27 106
MsG0880046186.01.T01 MTR_5g088610 45.690 116 61 2 10 124 7 121 1.82e-26 106
MsG0880046186.01.T01 MTR_4g128190 39.869 153 77 3 11 162 10 148 2.54e-26 103
MsG0880046186.01.T01 MTR_5g016510 43.089 123 67 2 14 135 5 125 2.70e-26 105
MsG0880046186.01.T01 MTR_4g019370 45.217 115 56 3 14 127 38 146 1.47e-25 103
MsG0880046186.01.T01 MTR_3g077650 42.342 111 61 2 9 118 176 284 2.16e-25 104
MsG0880046186.01.T01 MTR_7g061330 50.000 104 49 2 14 116 113 214 2.30e-25 105
MsG0880046186.01.T01 MTR_7g461410 50.000 104 49 2 14 116 113 214 2.30e-25 105
MsG0880046186.01.T01 MTR_4g105660 44.144 111 59 2 9 118 175 283 2.38e-25 104
MsG0880046186.01.T01 MTR_3g101290 43.519 108 60 1 8 115 31 137 2.74e-25 100
MsG0880046186.01.T01 MTR_7g061330 50.000 104 49 2 14 116 77 178 3.74e-25 104
MsG0880046186.01.T01 MTR_4g094982 37.086 151 82 4 14 159 5 147 1.22e-24 99.8
MsG0880046186.01.T01 MTR_7g037260 43.119 109 61 1 10 118 141 248 2.15e-24 100
MsG0880046186.01.T01 MTR_7g451170 44.660 103 54 2 14 115 191 291 6.26e-24 100
MsG0880046186.01.T01 MTR_6g015455 34.857 175 108 3 14 187 5 174 8.10e-24 101
MsG0880046186.01.T01 MTR_7g450950 43.299 97 54 1 14 110 157 252 1.68e-23 98.2
MsG0880046186.01.T01 MTR_1g057980 43.434 99 55 1 12 110 78 175 1.90e-23 97.1
MsG0880046186.01.T01 MTR_3g110028 44.231 104 55 2 14 116 85 186 5.59e-23 98.6
MsG0880046186.01.T01 MTR_4g088015 43.434 99 55 1 12 110 219 316 1.13e-22 97.1
MsG0880046186.01.T01 MTR_6g074860 40.602 133 69 5 14 141 4 131 1.42e-22 93.6
MsG0880046186.01.T01 MTR_5g082910 44.000 100 53 2 14 112 19 116 6.49e-22 92.8
MsG0880046186.01.T01 MTR_7g035350 45.263 95 49 2 17 110 228 320 6.76e-22 94.7
MsG0880046186.01.T01 MTR_1g026870 44.231 104 55 2 14 116 85 186 7.86e-22 95.5
MsG0880046186.01.T01 MTR_1g085880 45.714 105 55 2 12 114 11 115 2.10e-21 89.4
MsG0880046186.01.T01 MTR_1g085770 45.714 105 55 2 12 114 11 115 5.38e-21 90.5
MsG0880046186.01.T01 MTR_7g037130 42.574 101 57 1 10 110 141 240 8.00e-21 90.9
MsG0880046186.01.T01 MTR_5g041570 43.269 104 56 2 14 116 134 235 1.25e-20 91.3
MsG0880046186.01.T01 MTR_6g027340 41.837 98 54 2 14 110 16 111 1.45e-19 84.7
MsG0880046186.01.T01 MTR_4g082040 41.346 104 58 2 14 116 105 206 1.47e-19 87.8
MsG0880046186.01.T01 MTR_5g010650 46.392 97 49 2 14 109 110 204 2.03e-19 87.8
MsG0880046186.01.T01 MTR_6g027360 42.000 100 55 2 12 110 76 173 3.31e-19 85.9
MsG0880046186.01.T01 MTR_7g061550 39.655 116 62 2 17 124 10 125 4.81e-18 83.2
MsG0880046186.01.T01 MTR_3g089045 43.689 103 55 2 14 115 16 116 1.84e-17 80.5
MsG0880046186.01.T01 MTR_0023s0210 50.000 78 39 0 11 88 6 83 2.23e-17 75.5
MsG0880046186.01.T01 MTR_6g027370 34.848 132 83 2 14 144 99 228 5.51e-17 80.1
MsG0880046186.01.T01 MTR_7g086960 30.508 177 115 3 14 184 89 263 8.53e-17 79.3
MsG0880046186.01.T01 MTR_4g063100 65.217 46 16 0 70 115 1 46 1.21e-15 73.6
MsG0880046186.01.T01 MTR_2g096380 50.000 68 31 1 70 134 1 68 1.98e-15 72.8
MsG0880046186.01.T01 MTR_8g017480 59.615 52 21 0 1 52 1 52 2.55e-15 68.9
MsG0880046186.01.T01 MTR_6g055910 46.575 73 38 1 69 141 1 72 7.44e-15 72.0
MsG0880046186.01.T01 MTR_5g038910 37.374 99 61 1 17 115 29 126 2.13e-12 67.0
MsG0880046186.01.T01 MTR_5g038910 37.374 99 61 1 17 115 29 126 2.47e-12 66.6
MsG0880046186.01.T01 MTR_8g468380 33.333 126 82 2 17 142 25 148 9.48e-12 65.1
MsG0880046186.01.T01 MTR_5g007310 80.645 31 6 0 98 128 6 36 1.70e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046186.01.T01 AT4G12350 56.383 282 105 6 1 264 1 282 8.61e-104 303
MsG0880046186.01.T01 AT4G22680 61.278 266 88 5 1 251 1 266 2.69e-103 301
MsG0880046186.01.T01 AT1G66230 59.716 211 65 4 1 208 1 194 4.07e-83 251
MsG0880046186.01.T01 AT5G16600 82.963 135 23 0 1 135 1 135 1.08e-81 249
MsG0880046186.01.T01 AT5G62320 64.198 162 48 2 2 156 3 161 1.23e-71 220
MsG0880046186.01.T01 AT5G14340 61.392 158 61 0 1 158 13 170 7.52e-68 212
MsG0880046186.01.T01 AT3G61250 63.087 149 55 0 1 149 1 149 6.54e-67 210
MsG0880046186.01.T01 AT4G28110 69.531 128 39 0 1 128 1 128 7.79e-67 209
MsG0880046186.01.T01 AT5G15310 68.702 131 41 0 1 131 1 131 9.62e-67 211
MsG0880046186.01.T01 AT3G02940 71.094 128 37 0 1 128 1 128 1.04e-66 210
MsG0880046186.01.T01 AT5G15310 68.702 131 41 0 1 131 1 131 1.18e-66 210
MsG0880046186.01.T01 AT5G15310 69.231 130 40 0 1 130 1 130 1.88e-66 207
MsG0880046186.01.T01 AT3G01140 64.583 144 51 0 1 144 1 144 2.38e-66 210
MsG0880046186.01.T01 AT3G02940 71.094 128 37 0 1 128 1 128 2.74e-66 209
MsG0880046186.01.T01 AT3G02940 71.094 128 37 0 1 128 1 128 2.74e-66 209
MsG0880046186.01.T01 AT5G16770 70.312 128 38 0 1 128 1 128 3.38e-66 209
MsG0880046186.01.T01 AT5G16770 70.312 128 38 0 1 128 1 128 3.38e-66 209
MsG0880046186.01.T01 AT5G16770 70.312 128 38 0 1 128 1 128 8.47e-66 208
MsG0880046186.01.T01 AT5G16770 70.312 128 38 0 1 128 1 128 8.47e-66 208
MsG0880046186.01.T01 AT1G22640 52.105 190 87 1 1 186 1 190 2.73e-65 204
MsG0880046186.01.T01 AT4G34990 63.014 146 54 0 1 146 1 146 3.27e-65 205
MsG0880046186.01.T01 AT4G21440 67.188 128 42 0 1 128 1 128 9.22e-65 206
MsG0880046186.01.T01 AT1G34670 69.531 128 39 0 1 128 1 128 2.89e-64 205
MsG0880046186.01.T01 AT4G38620 58.553 152 63 0 1 152 1 152 4.21e-64 202
MsG0880046186.01.T01 AT5G10280 66.406 128 43 0 1 128 1 128 1.55e-63 202
MsG0880046186.01.T01 AT4G05100 67.442 129 41 1 1 128 1 129 3.03e-63 201
MsG0880046186.01.T01 AT3G01140 64.286 140 50 0 5 144 48 187 4.14e-63 203
MsG0880046186.01.T01 AT4G17785 68.992 129 39 1 1 128 1 129 5.10e-63 202
MsG0880046186.01.T01 AT4G17785 68.992 129 39 1 1 128 1 129 5.91e-63 202
MsG0880046186.01.T01 AT5G65230 67.969 128 41 0 1 128 1 128 7.69e-63 200
MsG0880046186.01.T01 AT1G57560 64.748 139 49 0 1 139 1 139 2.46e-62 197
MsG0880046186.01.T01 AT4G09460 48.780 205 100 3 1 203 1 202 2.72e-62 196
MsG0880046186.01.T01 AT1G57560 62.000 150 52 1 1 145 1 150 7.79e-62 197
MsG0880046186.01.T01 AT2G16720 54.167 168 75 1 1 168 1 166 2.25e-61 195
MsG0880046186.01.T01 AT1G09540 56.627 166 71 1 1 166 1 165 3.41e-61 197
MsG0880046186.01.T01 AT3G13540 48.485 198 96 3 5 198 16 211 6.21e-61 193
MsG0880046186.01.T01 AT5G26660 53.226 186 80 3 1 181 1 184 6.66e-61 196
MsG0880046186.01.T01 AT5G07690 60.284 141 56 0 1 141 1 141 1.91e-60 195
MsG0880046186.01.T01 AT5G61420 58.940 151 57 2 1 148 1 149 4.59e-60 194
MsG0880046186.01.T01 AT4G01680 57.143 161 64 2 1 161 1 156 2.07e-59 189
MsG0880046186.01.T01 AT5G54230 59.211 152 62 0 1 152 1 152 3.30e-59 191
MsG0880046186.01.T01 AT5G07700 52.874 174 71 2 1 174 1 163 3.85e-59 191
MsG0880046186.01.T01 AT5G07700 52.874 174 71 2 1 174 1 163 3.85e-59 191
MsG0880046186.01.T01 AT4G01680 57.143 161 64 2 1 161 1 156 7.50e-59 191
MsG0880046186.01.T01 AT5G56110 59.441 143 58 0 1 143 1 143 7.70e-59 190
MsG0880046186.01.T01 AT1G35515 50.000 192 82 2 1 189 1 181 1.28e-58 186
MsG0880046186.01.T01 AT1G18570 56.329 158 64 3 1 156 1 155 2.91e-57 187
MsG0880046186.01.T01 AT1G74080 56.463 147 64 0 1 147 1 147 4.89e-57 186
MsG0880046186.01.T01 AT3G23250 46.569 204 100 3 1 204 1 195 1.86e-56 183
MsG0880046186.01.T01 AT2G31180 67.797 118 38 0 1 118 1 118 2.82e-56 181
MsG0880046186.01.T01 AT1G06180 68.103 116 37 0 1 116 1 116 8.58e-56 180
MsG0880046186.01.T01 AT4G01680 53.179 173 64 3 1 161 1 168 1.39e-55 182
MsG0880046186.01.T01 AT3G47600 57.419 155 56 1 1 145 1 155 1.52e-55 182
MsG0880046186.01.T01 AT5G60890 58.462 130 54 0 1 130 1 130 1.07e-54 179
MsG0880046186.01.T01 AT2G47460 57.241 145 62 0 1 145 1 145 6.56e-54 179
MsG0880046186.01.T01 AT1G16490 52.121 165 71 1 2 158 4 168 1.45e-53 175
MsG0880046186.01.T01 AT3G12720 61.905 126 47 1 1 126 12 136 1.46e-53 176
MsG0880046186.01.T01 AT3G28470 55.484 155 61 1 1 147 1 155 3.25e-53 176
MsG0880046186.01.T01 AT5G62470 61.871 139 51 1 1 139 1 137 3.48e-53 176
MsG0880046186.01.T01 AT1G79180 65.812 117 40 0 2 118 4 120 1.20e-52 173
MsG0880046186.01.T01 AT5G49330 63.866 119 43 0 1 119 1 119 1.29e-52 175
MsG0880046186.01.T01 AT3G62610 65.517 116 40 0 1 116 1 116 1.66e-52 174
MsG0880046186.01.T01 AT1G56160 66.957 115 38 0 2 116 4 118 3.23e-52 172
MsG0880046186.01.T01 AT3G28910 63.359 131 46 1 1 131 1 129 3.70e-52 173
MsG0880046186.01.T01 AT1G18710 55.000 140 63 0 1 140 1 140 5.21e-52 171
MsG0880046186.01.T01 AT3G12820 66.379 116 39 0 3 118 5 120 6.94e-52 170
MsG0880046186.01.T01 AT1G74650 63.025 119 44 0 1 119 1 119 2.49e-51 171
MsG0880046186.01.T01 AT1G74430 56.204 137 60 0 1 137 1 137 4.66e-51 169
MsG0880046186.01.T01 AT1G08810 62.295 122 46 0 1 122 1 122 5.60e-51 169
MsG0880046186.01.T01 AT5G62470 61.151 139 51 2 1 139 1 136 1.34e-50 170
MsG0880046186.01.T01 AT1G63910 54.610 141 64 0 1 141 1 141 2.58e-50 169
MsG0880046186.01.T01 AT3G13890 62.393 117 44 0 1 117 1 117 3.80e-50 169
MsG0880046186.01.T01 AT5G12870 66.667 108 36 0 12 119 18 125 7.72e-48 160
MsG0880046186.01.T01 AT3G13890 57.937 126 44 1 1 117 1 126 4.45e-47 161
MsG0880046186.01.T01 AT3G49690 60.169 118 46 1 1 117 1 118 1.12e-46 158
MsG0880046186.01.T01 AT5G65790 59.322 118 47 1 1 117 1 118 4.78e-46 159
MsG0880046186.01.T01 AT4G37780 57.627 118 49 1 1 117 1 118 5.12e-46 157
MsG0880046186.01.T01 AT5G57620 52.857 140 59 2 1 139 1 134 8.87e-46 157
MsG0880046186.01.T01 AT1G79180 51.333 150 40 1 2 118 4 153 9.20e-46 156
MsG0880046186.01.T01 AT2G36890 57.031 128 54 1 1 127 1 128 9.46e-46 155
MsG0880046186.01.T01 AT2G36890 57.480 127 53 1 1 126 42 168 2.09e-45 156
MsG0880046186.01.T01 AT3G01530 51.825 137 63 1 12 148 25 158 6.71e-45 150
MsG0880046186.01.T01 AT5G23000 58.475 118 48 1 1 117 1 118 7.23e-45 154
MsG0880046186.01.T01 AT3G08500 63.303 109 40 0 8 116 26 134 1.12e-44 154
MsG0880046186.01.T01 AT4G13480 66.019 103 35 0 13 115 7 109 1.44e-44 151
MsG0880046186.01.T01 AT3G24310 64.762 105 37 0 11 115 17 121 3.19e-44 151
MsG0880046186.01.T01 AT5G40350 60.550 109 43 0 12 120 17 125 6.20e-44 148
MsG0880046186.01.T01 AT3G27810 40.488 205 102 3 12 196 20 224 2.42e-43 147
MsG0880046186.01.T01 AT5G52260 48.795 166 73 3 13 175 13 169 8.74e-43 147
MsG0880046186.01.T01 AT5G14750 60.000 105 42 0 12 116 16 120 1.54e-42 144
MsG0880046186.01.T01 AT4G25560 59.434 106 43 0 13 118 11 116 4.38e-42 145
MsG0880046186.01.T01 AT5G40330 60.577 104 41 0 13 116 13 116 5.60e-42 144
MsG0880046186.01.T01 AT2G32460 55.556 117 51 1 11 127 17 132 1.11e-41 149
MsG0880046186.01.T01 AT2G32460 55.556 117 51 1 11 127 5 120 1.13e-41 149
MsG0880046186.01.T01 AT1G68320 56.757 111 48 0 12 122 19 129 1.51e-41 144
MsG0880046186.01.T01 AT5G55020 58.182 110 45 1 12 121 26 134 2.25e-41 149
MsG0880046186.01.T01 AT5G26660 57.812 128 47 3 45 167 14 139 3.17e-41 144
MsG0880046186.01.T01 AT5G06100 57.407 108 46 0 8 115 28 135 4.55e-41 147
MsG0880046186.01.T01 AT3G46130 60.952 105 41 0 11 115 8 112 5.63e-41 142
MsG0880046186.01.T01 AT5G59780 61.538 104 40 0 12 115 8 111 5.74e-41 141
MsG0880046186.01.T01 AT3G27920 57.143 105 45 0 13 117 15 119 7.36e-41 141
MsG0880046186.01.T01 AT5G35550 53.968 126 54 1 12 137 14 135 7.92e-41 142
MsG0880046186.01.T01 AT3G06490 57.391 115 49 0 8 122 15 129 1.15e-40 143
MsG0880046186.01.T01 AT1G25340 53.913 115 53 0 13 127 19 133 1.40e-40 142
MsG0880046186.01.T01 AT5G06100 57.407 108 46 0 8 115 28 135 1.75e-40 147
MsG0880046186.01.T01 AT5G06100 57.407 108 46 0 8 115 28 135 1.75e-40 147
MsG0880046186.01.T01 AT5G06100 57.407 108 46 0 8 115 28 135 1.75e-40 147
MsG0880046186.01.T01 AT5G06100 57.407 108 46 0 8 115 28 135 1.75e-40 147
MsG0880046186.01.T01 AT3G30210 60.577 104 41 0 11 114 26 129 2.11e-40 141
MsG0880046186.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 3.19e-40 145
MsG0880046186.01.T01 AT1G48000 45.638 149 79 1 12 158 32 180 4.63e-40 139
MsG0880046186.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 1.00e-39 145
MsG0880046186.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 1.00e-39 145
MsG0880046186.01.T01 AT3G11440 57.692 104 44 0 12 115 41 144 1.00e-39 145
MsG0880046186.01.T01 AT2G26960 43.333 180 99 3 9 188 17 193 4.67e-39 141
MsG0880046186.01.T01 AT3G53200 42.045 176 91 3 12 176 9 184 1.04e-38 135
MsG0880046186.01.T01 AT2G47190 53.153 111 52 0 12 122 20 130 1.70e-38 136
MsG0880046186.01.T01 AT3G48920 50.820 122 55 1 13 134 19 135 2.95e-38 135
MsG0880046186.01.T01 AT5G52600 41.509 159 80 1 12 170 12 157 3.25e-38 133
MsG0880046186.01.T01 AT4G26930 54.369 103 47 0 12 114 19 121 1.34e-37 137
MsG0880046186.01.T01 AT5G49620 53.043 115 54 0 8 122 22 136 1.42e-36 132
MsG0880046186.01.T01 AT1G25340 51.304 115 51 1 13 127 19 128 1.61e-35 129
MsG0880046186.01.T01 AT3G47600 52.273 132 49 2 24 145 22 149 3.12e-35 129
MsG0880046186.01.T01 AT1G25340 51.304 115 51 1 13 127 19 128 4.47e-35 128
MsG0880046186.01.T01 AT1G22640 49.242 132 63 1 59 186 2 133 2.33e-34 123
MsG0880046186.01.T01 AT1G66370 55.652 115 47 1 1 115 1 111 3.26e-34 124
MsG0880046186.01.T01 AT5G49620 47.287 129 54 1 8 122 22 150 5.73e-33 123
MsG0880046186.01.T01 AT1G66390 59.048 105 43 0 11 115 7 111 8.07e-32 118
MsG0880046186.01.T01 AT1G66380 58.095 105 44 0 11 115 7 111 1.27e-31 114
MsG0880046186.01.T01 AT1G56650 52.381 126 52 1 11 128 7 132 2.34e-31 117
MsG0880046186.01.T01 AT5G35550 55.556 99 40 1 39 137 44 138 2.40e-31 117
MsG0880046186.01.T01 AT3G27810 38.953 172 85 3 45 196 4 175 4.82e-31 114
MsG0880046186.01.T01 AT5G40350 65.789 76 26 0 45 120 5 80 6.32e-31 113
MsG0880046186.01.T01 AT5G59780 71.831 71 20 0 45 115 20 90 6.44e-31 115
MsG0880046186.01.T01 AT3G46130 70.833 72 21 0 44 115 9 80 6.66e-31 115
MsG0880046186.01.T01 AT3G46130 71.831 71 20 0 45 115 20 90 1.19e-30 115
MsG0880046186.01.T01 AT3G12820 70.423 71 21 0 48 118 2 72 1.73e-30 113
MsG0880046186.01.T01 AT5G14750 69.565 69 21 0 48 116 18 86 1.79e-30 112
MsG0880046186.01.T01 AT3G53200 44.755 143 68 3 45 176 9 151 3.31e-30 112
MsG0880046186.01.T01 AT1G18960 46.154 117 60 2 14 130 10 123 7.71e-29 112
MsG0880046186.01.T01 AT2G26950 45.000 120 64 2 14 133 18 135 2.69e-28 111
MsG0880046186.01.T01 AT5G11050 45.614 114 56 3 3 115 97 205 5.68e-28 111
MsG0880046186.01.T01 AT3G60460 49.038 104 52 1 12 114 11 114 5.74e-28 109
MsG0880046186.01.T01 AT5G58850 49.515 103 49 2 14 115 105 205 7.80e-28 111
MsG0880046186.01.T01 AT1G71030 58.442 77 32 0 51 127 5 81 5.67e-27 103
MsG0880046186.01.T01 AT1G71030 53.333 90 41 1 38 127 7 95 7.11e-27 103
MsG0880046186.01.T01 AT4G18770 46.226 106 54 2 14 118 217 320 3.92e-26 106
MsG0880046186.01.T01 AT3G27785 47.525 101 52 1 9 109 184 283 1.80e-25 104
MsG0880046186.01.T01 AT3G09230 36.264 182 93 4 14 180 55 228 3.38e-25 103
MsG0880046186.01.T01 AT5G02320 48.077 104 51 2 14 116 127 228 6.03e-25 103
MsG0880046186.01.T01 AT5G02320 48.077 104 51 2 14 116 127 228 6.03e-25 103
MsG0880046186.01.T01 AT5G02320 48.077 104 51 2 14 116 67 168 6.74e-25 103
MsG0880046186.01.T01 AT3G09370 47.573 103 51 2 14 115 135 235 1.61e-24 102
MsG0880046186.01.T01 AT3G09370 47.573 103 51 2 14 115 130 230 1.67e-24 102
MsG0880046186.01.T01 AT3G09370 47.573 103 51 2 14 115 143 243 2.12e-24 102
MsG0880046186.01.T01 AT5G40360 41.905 105 59 2 12 116 156 258 2.93e-24 100
MsG0880046186.01.T01 AT2G39880 47.170 106 47 2 14 115 50 150 4.33e-24 100
MsG0880046186.01.T01 AT4G37260 44.660 103 54 2 14 115 13 113 3.92e-23 96.7
MsG0880046186.01.T01 AT5G67300 43.689 103 55 2 14 115 6 106 4.62e-23 96.3
MsG0880046186.01.T01 AT5G11510 45.192 104 54 2 14 116 81 182 5.21e-23 99.0
MsG0880046186.01.T01 AT5G11510 45.192 104 54 2 14 116 81 182 5.21e-23 99.0
MsG0880046186.01.T01 AT5G11510 45.192 104 54 2 14 116 81 182 5.21e-23 99.0
MsG0880046186.01.T01 AT2G23290 46.602 103 52 2 14 115 13 113 5.60e-23 96.3
MsG0880046186.01.T01 AT3G55730 43.925 107 57 2 14 119 56 160 7.62e-23 97.1
MsG0880046186.01.T01 AT5G11510 45.192 104 54 2 14 116 81 182 7.63e-23 98.2
MsG0880046186.01.T01 AT5G11510 45.192 104 54 2 14 116 81 182 7.86e-23 98.2
MsG0880046186.01.T01 AT3G50060 44.660 103 54 2 14 115 6 106 9.71e-23 95.5
MsG0880046186.01.T01 AT1G66380 61.644 73 28 0 43 115 6 78 1.26e-22 90.1
MsG0880046186.01.T01 AT1G69560 43.119 109 59 2 9 116 102 208 3.37e-22 94.4
MsG0880046186.01.T01 AT1G69560 43.119 109 59 2 9 116 118 224 4.32e-22 94.4
MsG0880046186.01.T01 AT5G14750 65.517 58 20 0 59 116 2 59 8.12e-22 89.0
MsG0880046186.01.T01 AT5G14750 65.517 58 20 0 59 116 2 59 8.12e-22 89.0
MsG0880046186.01.T01 AT4G32730 43.269 104 56 2 14 116 87 188 1.22e-21 94.7
MsG0880046186.01.T01 AT4G32730 43.269 104 56 2 14 116 87 188 1.36e-21 94.7
MsG0880046186.01.T01 AT4G32730 43.269 104 56 2 14 116 87 188 1.36e-21 94.7
MsG0880046186.01.T01 AT4G32730 43.269 104 56 2 14 116 87 188 1.36e-21 94.7
MsG0880046186.01.T01 AT4G32730 43.269 104 56 2 14 116 87 188 1.36e-21 94.7
MsG0880046186.01.T01 AT3G23250 65.517 58 20 0 59 116 2 59 1.45e-21 90.5
MsG0880046186.01.T01 AT2G25230 33.333 189 102 6 9 190 21 192 1.67e-21 90.5
MsG0880046186.01.T01 AT1G17950 45.631 103 53 2 14 115 5 105 6.51e-21 89.4
MsG0880046186.01.T01 AT1G26780 43.269 104 56 2 14 116 98 199 3.22e-20 89.4
MsG0880046186.01.T01 AT1G26780 43.269 104 56 2 14 116 98 199 3.89e-20 87.8
MsG0880046186.01.T01 AT1G22640 45.631 103 52 1 88 186 16 118 6.89e-20 85.1
MsG0880046186.01.T01 AT4G28110 78.049 41 9 0 88 128 4 44 5.67e-19 82.8
MsG0880046186.01.T01 AT1G73410 45.631 103 53 2 14 115 6 106 6.40e-19 84.0
MsG0880046186.01.T01 AT5G61420 59.155 71 24 2 81 148 2 70 1.20e-18 84.0
MsG0880046186.01.T01 AT1G73410 45.631 103 53 2 14 115 6 106 1.79e-18 81.6
MsG0880046186.01.T01 AT4G00540 42.202 109 57 3 12 116 101 207 3.20e-18 84.0
MsG0880046186.01.T01 AT4G33450 37.719 114 63 3 3 115 13 119 3.95e-18 81.6
MsG0880046186.01.T01 AT4G00540 42.202 109 57 3 12 116 99 205 5.53e-18 83.6
MsG0880046186.01.T01 AT3G29020 36.538 104 63 2 14 116 65 166 1.33e-17 80.1
MsG0880046186.01.T01 AT3G29020 36.538 104 63 2 14 116 67 168 1.44e-17 81.3
MsG0880046186.01.T01 AT5G40430 34.821 112 71 1 9 120 49 158 2.38e-17 79.7
MsG0880046186.01.T01 AT1G66380 51.190 84 41 0 11 94 7 90 3.01e-17 75.9
MsG0880046186.01.T01 AT5G17800 39.216 102 61 1 14 115 93 193 3.17e-17 80.5
MsG0880046186.01.T01 AT5G15310 72.727 44 12 0 88 131 9 52 3.79e-17 79.0
MsG0880046186.01.T01 AT5G59780 69.565 46 14 0 70 115 1 46 1.26e-16 75.9
MsG0880046186.01.T01 AT3G46130 69.565 46 14 0 70 115 1 46 2.73e-16 75.5
MsG0880046186.01.T01 AT2G37630 39.604 101 59 1 17 115 7 107 3.03e-16 78.2
MsG0880046186.01.T01 AT5G14340 49.296 71 36 0 88 158 10 80 2.43e-15 72.8
MsG0880046186.01.T01 AT4G25560 54.000 50 23 0 69 118 1 50 6.85e-14 69.3
MsG0880046186.01.T01 AT3G28910 58.182 55 21 1 77 131 1 53 1.05e-13 69.3
MsG0880046186.01.T01 AT5G39700 34.545 110 71 1 15 124 57 165 1.19e-13 68.2
MsG0880046186.01.T01 AT1G14350 35.000 120 69 2 17 136 28 138 2.25e-13 70.1
MsG0880046186.01.T01 AT1G14350 35.000 120 69 2 17 136 28 138 2.25e-13 70.1
MsG0880046186.01.T01 AT1G74650 65.116 43 15 0 77 119 1 43 2.31e-13 68.6
MsG0880046186.01.T01 AT1G74430 50.877 57 28 0 81 137 12 68 2.73e-13 67.4
MsG0880046186.01.T01 AT2G02820 37.374 99 61 1 17 115 33 130 3.34e-12 66.6
MsG0880046186.01.T01 AT2G02820 37.374 99 61 1 17 115 33 130 3.46e-12 66.6
MsG0880046186.01.T01 AT2G02820 37.374 99 61 1 17 115 33 130 3.98e-12 65.9

Find 71 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACTTTCTTCCAATTAAT+TGG 0.155598 8:-70255382 MsG0880046186.01.T01:three_prime_UTR
TATGAATAAGTAAGTATATT+TGG 0.211575 8:-70255588 MsG0880046186.01.T01:three_prime_UTR
ATAAAATTACACCAATTAAT+TGG 0.231851 8:+70255371 None:intergenic
CATCAGTTTCCTTCACTTCA+TGG 0.233477 8:+70255951 None:intergenic
CACCATTGGTGGAAGCTCTT+TGG 0.247846 8:-70255802 MsG0880046186.01.T01:CDS
GATGTTTAATTTGAAAATAA+TGG 0.248735 8:-70255265 MsG0880046186.01.T01:three_prime_UTR
AGTGTTTCAAAGAATGTTCT+TGG 0.272409 8:-70255502 MsG0880046186.01.T01:three_prime_UTR
ACCATTGGTGGAAGCTCTTT+GGG 0.294356 8:-70255801 MsG0880046186.01.T01:CDS
TTCACTTCATGGTTGTTAAC+AGG 0.301922 8:+70255962 None:intergenic
TCCCCAGCTGAAAATTCTTC+TGG 0.318088 8:-70255896 MsG0880046186.01.T01:CDS
TTCAAAGGTTCATGAGTAAT+GGG 0.340405 8:+70256043 None:intergenic
CGCCGAAGGCCGGCAAGTTT+AGG 0.348205 8:+70256793 None:intergenic
TCAAGTACACTGCAAACTAT+AGG 0.364172 8:-70255635 MsG0880046186.01.T01:CDS
ATTCTCTAATGAATAGTATA+TGG 0.364682 8:-70255835 MsG0880046186.01.T01:CDS
TGCTTGGCTATTTGATTGTC+AGG 0.369569 8:-70255705 MsG0880046186.01.T01:CDS
TGCCTAAACTTGCCGGCCTT+CGG 0.372731 8:-70256795 MsG0880046186.01.T01:CDS
AATCTCATTGTCTGTTCTCC+CGG 0.377399 8:+70256120 None:intergenic
TGTCAAAGTAAGATTATTAG+AGG 0.380952 8:-70255319 MsG0880046186.01.T01:three_prime_UTR
GACTTTGGTATTCATGACTT+TGG 0.387701 8:-70255683 MsG0880046186.01.T01:CDS
TTGTCTTCCTCAGCTGTCCA+TGG 0.396088 8:+70256868 None:intergenic
TCCATGCCCGTCTTGGCAAC+AGG 0.396729 8:-70256672 MsG0880046186.01.T01:intron
CGTGCTGTGCCTAAACTTGC+CGG 0.397024 8:-70256802 MsG0880046186.01.T01:CDS
GGTGGAAGCTCTTTGGGAAA+TGG 0.400995 8:-70255795 MsG0880046186.01.T01:CDS
CTATTTGATTGTCAGGACTT+TGG 0.417724 8:-70255698 MsG0880046186.01.T01:CDS
ATTCAAAGGTTCATGAGTAA+TGG 0.432527 8:+70256042 None:intergenic
TTGCATTGGTCGTGAGCTAT+GGG 0.432774 8:-70256931 MsG0880046186.01.T01:exon
CAAAGAATGTTCTTGGAAAG+TGG 0.445187 8:-70255495 MsG0880046186.01.T01:three_prime_UTR
CAAGTACACTGCAAACTATA+GGG 0.456076 8:-70255634 MsG0880046186.01.T01:CDS
AGGAGACCTCTCTTTAAATC+AGG 0.457518 8:+70256727 None:intergenic
CTTGCATTGGTCGTGAGCTA+TGG 0.459948 8:-70256932 MsG0880046186.01.T01:exon
AAGATTGCTTCACGGTTACC+CGG 0.461826 8:-70256139 MsG0880046186.01.T01:CDS
GATGATGCTTGTTTATTCAA+AGG 0.463222 8:+70256028 None:intergenic
GGATGAAGTACTACTATCAT+TGG 0.464276 8:+70256006 None:intergenic
TTACCAATGGACAATGTTGT+TGG 0.466351 8:-70256825 MsG0880046186.01.T01:CDS
CTTACCGCAGCGCCGAAGGC+CGG 0.466439 8:+70256783 None:intergenic
CTTGGGAGGATAATTGTGCT+TGG 0.466595 8:-70255721 MsG0880046186.01.T01:CDS
GTAAGAGCTGTCGTCTTCGT+TGG 0.481721 8:-70256765 MsG0880046186.01.T01:CDS
AGCTCTTACCGCAGCGCCGA+AGG 0.506544 8:+70256779 None:intergenic
TCCCAAAGAGCTTCCACCAA+TGG 0.511014 8:+70255800 None:intergenic
TTCACTAGGAACATCATAAG+AGG 0.511097 8:+70255459 None:intergenic
CTTCGTCCTGATTTAAAGAG+AGG 0.516437 8:-70256733 MsG0880046186.01.T01:CDS
ATCTCATTGTCTGTTCTCCC+GGG 0.520189 8:+70256121 None:intergenic
TCTAATGAATAGTATATGGT+TGG 0.521314 8:-70255831 MsG0880046186.01.T01:CDS
GTTGATCTCCATGCCCGTCT+TGG 0.522608 8:-70256679 MsG0880046186.01.T01:CDS
TTACTTTGAAGGACTTGCAT+TGG 0.523681 8:-70256945 MsG0880046186.01.T01:five_prime_UTR
ACTGCAAACTATAGGGATGA+AGG 0.532537 8:-70255627 MsG0880046186.01.T01:CDS
ACCTGTTGCCAAGACGGGCA+TGG 0.540749 8:+70256671 None:intergenic
CTTGCCGGCCTTCGGCGCTG+CGG 0.546547 8:-70256787 MsG0880046186.01.T01:CDS
AGGTCTCCTCACTGAAGCAG+AGG 0.546557 8:-70256713 MsG0880046186.01.T01:CDS
GGTGGTCGAAGATTGCTTCA+CGG 0.554833 8:-70256147 MsG0880046186.01.T01:CDS
ATGAAGTGAAGGAAACTGAT+GGG 0.557455 8:-70255949 MsG0880046186.01.T01:CDS
CATGAAGTGAAGGAAACTGA+TGG 0.577027 8:-70255950 MsG0880046186.01.T01:CDS
GACAAACTTGGTGTGAAGAA+AGG 0.580734 8:-70256892 MsG0880046186.01.T01:CDS
GAATGTTCTTGGAAAGTGGA+AGG 0.586986 8:-70255491 MsG0880046186.01.T01:three_prime_UTR
GCACAATTATCCTCCCAAGA+AGG 0.588656 8:+70255725 None:intergenic
AGATTGCTTCACGGTTACCC+GGG 0.595542 8:-70256138 MsG0880046186.01.T01:CDS
TTGGTGTGAAGAAAGGTCCA+TGG 0.601705 8:-70256885 MsG0880046186.01.T01:CDS
CAACCTTGTTGTGACAAACT+TGG 0.602134 8:-70256904 MsG0880046186.01.T01:CDS
GTCAAAGTAAGATTATTAGA+GGG 0.607381 8:-70255318 MsG0880046186.01.T01:three_prime_UTR
ACGCCAACAACATTGTCCAT+TGG 0.609352 8:+70256822 None:intergenic
TAGGAACATCATAAGAGGAA+AGG 0.611121 8:+70255464 None:intergenic
TGTTAACAACCATGAAGTGA+AGG 0.612004 8:-70255960 MsG0880046186.01.T01:CDS
GTTGGATGAAACACCATTGG+TGG 0.620513 8:-70255813 MsG0880046186.01.T01:CDS
ACACCAAGTTTGTCACAACA+AGG 0.629808 8:+70256901 None:intergenic
GAAAGGTCCATGGACAGCTG+AGG 0.648683 8:-70256875 MsG0880046186.01.T01:CDS
ACTAAATAAAACTCAACACA+AGG 0.652484 8:+70255526 None:intergenic
ATGGTTGGATGAAACACCAT+TGG 0.670766 8:-70255816 MsG0880046186.01.T01:CDS
TGCATTGGTCGTGAGCTATG+GGG 0.692051 8:-70256930 MsG0880046186.01.T01:exon
TGATGGGGTTGTCAACTCAG+AGG 0.704259 8:-70255933 MsG0880046186.01.T01:CDS
GCTGCTCCTCTGCTTCAGTG+AGG 0.712120 8:+70256707 None:intergenic
TGAAGTGAAGGAAACTGATG+GGG 0.739601 8:-70255948 MsG0880046186.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTACATAAGAATTT+TGG + Chr8:70255717-70255736 None:intergenic 10.0%
!! ATAAAATTACACCAATTAAT+TGG + Chr8:70256831-70256850 None:intergenic 15.0%
!! TATGAATAAGTAAGTATATT+TGG - Chr8:70256611-70256630 MsG0880046186.01.T01:intron 15.0%
!! TTATTATTGATGTTAAAAGT+AGG - Chr8:70255794-70255813 MsG0880046186.01.T01:CDS 15.0%
!!! GATGTTTAATTTGAAAATAA+TGG - Chr8:70256934-70256953 MsG0880046186.01.T01:exon 15.0%
!! ACAATGAGATTAAAAATCAT+TGG - Chr8:70256091-70256110 MsG0880046186.01.T01:CDS 20.0%
!! ATTCTCTAATGAATAGTATA+TGG - Chr8:70256364-70256383 MsG0880046186.01.T01:intron 20.0%
!! TATACTTTCTTCCAATTAAT+TGG - Chr8:70256817-70256836 MsG0880046186.01.T01:CDS 20.0%
!!! TGTATTTTATGTGTTTATGT+TGG + Chr8:70255666-70255685 None:intergenic 20.0%
!!! TTGCTATCATTTTTTTGATT+TGG + Chr8:70256766-70256785 None:intergenic 20.0%
! AAGAAAAAGCTCATTAAGAT+GGG - Chr8:70256126-70256145 MsG0880046186.01.T01:CDS 25.0%
! ACTAAATAAAACTCAACACA+AGG + Chr8:70256676-70256695 None:intergenic 25.0%
! AGACATGTTAATTGAATTGA+AGG + Chr8:70255771-70255790 None:intergenic 25.0%
! CATAGACTAATTTCTTAAGT+TGG - Chr8:70255994-70256013 MsG0880046186.01.T01:CDS 25.0%
! GTCAAAGTAAGATTATTAGA+GGG - Chr8:70256881-70256900 MsG0880046186.01.T01:CDS 25.0%
! TATTGATGTTAAAAGTAGGT+GGG - Chr8:70255798-70255817 MsG0880046186.01.T01:CDS 25.0%
! TCTAATGAATAGTATATGGT+TGG - Chr8:70256368-70256387 MsG0880046186.01.T01:intron 25.0%
! TGTCAAAGTAAGATTATTAG+AGG - Chr8:70256880-70256899 MsG0880046186.01.T01:CDS 25.0%
! TTATTGATGTTAAAAGTAGG+TGG - Chr8:70255797-70255816 MsG0880046186.01.T01:CDS 25.0%
! TTTATATCATGTCTTAGACA+GGG - Chr8:70255824-70255843 MsG0880046186.01.T01:CDS 25.0%
!! TGTAGCATTACCATTATTTT+TGG + Chr8:70256790-70256809 None:intergenic 25.0%
!! TTTTATATCATGTCTTAGAC+AGG - Chr8:70255823-70255842 MsG0880046186.01.T01:CDS 25.0%
!!! AAGAATTTTGGTGTCAAAAA+CGG + Chr8:70255705-70255724 None:intergenic 25.0%
!!! ATCACTTTTATTCTTACCAA+TGG - Chr8:70255361-70255380 MsG0880046186.01.T01:three_prime_UTR 25.0%
!!! TTTTTTGTGTTTTCTGCTAT+AGG + Chr8:70256438-70256457 None:intergenic 25.0%
!!! TTTTTTTGATTTGGTTCACT+AGG + Chr8:70256757-70256776 None:intergenic 25.0%
AGTGTTTCAAAGAATGTTCT+TGG - Chr8:70256697-70256716 MsG0880046186.01.T01:CDS 30.0%
ATATAGTTGATTGTTGTCTC+AGG - Chr8:70256031-70256050 MsG0880046186.01.T01:CDS 30.0%
ATTCAAAGGTTCATGAGTAA+TGG + Chr8:70256160-70256179 None:intergenic 30.0%
CAAGAAAAAGCTCATTAAGA+TGG - Chr8:70256125-70256144 MsG0880046186.01.T01:CDS 30.0%
GATGATGCTTGTTTATTCAA+AGG + Chr8:70256174-70256193 None:intergenic 30.0%
TGATAGCAAGCCAAAAATAA+TGG - Chr8:70256777-70256796 MsG0880046186.01.T01:CDS 30.0%
TTCAAAGGTTCATGAGTAAT+GGG + Chr8:70256159-70256178 None:intergenic 30.0%
! GTGTTTATGTTGGTTGTATA+AGG + Chr8:70255656-70255675 None:intergenic 30.0%
!! CTAATTTCTTAAGTTGGTGA+TGG - Chr8:70256000-70256019 MsG0880046186.01.T01:CDS 30.0%
!!! AGAATTTTGGTGTCAAAAAC+GGG + Chr8:70255704-70255723 None:intergenic 30.0%
ATGAAGTGAAGGAAACTGAT+GGG - Chr8:70256250-70256269 MsG0880046186.01.T01:intron 35.0%
CAAAGAATGTTCTTGGAAAG+TGG - Chr8:70256704-70256723 MsG0880046186.01.T01:CDS 35.0%
CAAGTACACTGCAAACTATA+GGG - Chr8:70256565-70256584 MsG0880046186.01.T01:intron 35.0%
CTATTTGATTGTCAGGACTT+TGG - Chr8:70256501-70256520 MsG0880046186.01.T01:intron 35.0%
GACTTTGGTATTCATGACTT+TGG - Chr8:70256516-70256535 MsG0880046186.01.T01:intron 35.0%
TAGGAACATCATAAGAGGAA+AGG + Chr8:70256738-70256757 None:intergenic 35.0%
TCAAGTACACTGCAAACTAT+AGG - Chr8:70256564-70256583 MsG0880046186.01.T01:intron 35.0%
TGTTAACAACCATGAAGTGA+AGG - Chr8:70256239-70256258 MsG0880046186.01.T01:intron 35.0%
TTACCAATGGACAATGTTGT+TGG - Chr8:70255374-70255393 MsG0880046186.01.T01:three_prime_UTR 35.0%
TTCACTAGGAACATCATAAG+AGG + Chr8:70256743-70256762 None:intergenic 35.0%
TTCACTTCATGGTTGTTAAC+AGG + Chr8:70256240-70256259 None:intergenic 35.0%
! GGATGAAGTACTACTATCAT+TGG + Chr8:70256196-70256215 None:intergenic 35.0%
! TTACTTTGAAGGACTTGCAT+TGG - Chr8:70255254-70255273 MsG0880046186.01.T01:three_prime_UTR 35.0%
!! ACATGAGTTTTATGCCTTCT+TGG - Chr8:70256460-70256479 MsG0880046186.01.T01:intron 35.0%
!! CATGAGTTTTATGCCTTCTT+GGG - Chr8:70256461-70256480 MsG0880046186.01.T01:intron 35.0%
!!! GAATTTTGGTGTCAAAAACG+GGG + Chr8:70255703-70255722 None:intergenic 35.0%
AAAAAACCTGTTGCCAAGAC+GGG + Chr8:70255536-70255555 None:intergenic 40.0%
AATCTCATTGTCTGTTCTCC+CGG + Chr8:70256082-70256101 None:intergenic 40.0%
ACACCAAGTTTGTCACAACA+AGG + Chr8:70255301-70255320 None:intergenic 40.0%
ACTGCAAACTATAGGGATGA+AGG - Chr8:70256572-70256591 MsG0880046186.01.T01:intron 40.0%
AGGAGACCTCTCTTTAAATC+AGG + Chr8:70255475-70255494 None:intergenic 40.0%
ATGGTTGGATGAAACACCAT+TGG - Chr8:70256383-70256402 MsG0880046186.01.T01:intron 40.0%
CAAAAAACCTGTTGCCAAGA+CGG + Chr8:70255537-70255556 None:intergenic 40.0%
CATCAGTTTCCTTCACTTCA+TGG + Chr8:70256251-70256270 None:intergenic 40.0%
CATGAAGTGAAGGAAACTGA+TGG - Chr8:70256249-70256268 MsG0880046186.01.T01:intron 40.0%
CTTCGTCCTGATTTAAAGAG+AGG - Chr8:70255466-70255485 MsG0880046186.01.T01:three_prime_UTR 40.0%
GAATGTTCTTGGAAAGTGGA+AGG - Chr8:70256708-70256727 MsG0880046186.01.T01:CDS 40.0%
TAGTTGATTGTTGTCTCAGG+TGG - Chr8:70256034-70256053 MsG0880046186.01.T01:CDS 40.0%
TGAAGTGAAGGAAACTGATG+GGG - Chr8:70256251-70256270 MsG0880046186.01.T01:intron 40.0%
TGCTTGGCTATTTGATTGTC+AGG - Chr8:70256494-70256513 MsG0880046186.01.T01:intron 40.0%
TTAGTCTATGCAATTGCGCA+CGG + Chr8:70255984-70256003 None:intergenic 40.0%
! CAACCTTGTTGTGACAAACT+TGG - Chr8:70255295-70255314 MsG0880046186.01.T01:three_prime_UTR 40.0%
! CTCCAGAAGAATTTTCAGCT+GGG + Chr8:70256308-70256327 None:intergenic 40.0%
! TCCAGAAGAATTTTCAGCTG+GGG + Chr8:70256307-70256326 None:intergenic 40.0%
! TCTCCAGAAGAATTTTCAGC+TGG + Chr8:70256309-70256328 None:intergenic 40.0%
! TCTTAGACAGGGTTTTCTTG+TGG - Chr8:70255835-70255854 MsG0880046186.01.T01:CDS 40.0%
!! GACAAACTTGGTGTGAAGAA+AGG - Chr8:70255307-70255326 MsG0880046186.01.T01:three_prime_UTR 40.0%
!!! GGAGCTTCAATTTTAGCTCA+TGG + Chr8:70256655-70256674 None:intergenic 40.0%
AAGATTGCTTCACGGTTACC+CGG - Chr8:70256060-70256079 MsG0880046186.01.T01:CDS 45.0%
ACCATTGGTGGAAGCTCTTT+GGG - Chr8:70256398-70256417 MsG0880046186.01.T01:intron 45.0%
ACGCCAACAACATTGTCCAT+TGG + Chr8:70255380-70255399 None:intergenic 45.0%
ATCTCATTGTCTGTTCTCCC+GGG + Chr8:70256081-70256100 None:intergenic 45.0%
CTTGGGAGGATAATTGTGCT+TGG - Chr8:70256478-70256497 MsG0880046186.01.T01:intron 45.0%
GCACAATTATCCTCCCAAGA+AGG + Chr8:70256477-70256496 None:intergenic 45.0%
GTTGGATGAAACACCATTGG+TGG - Chr8:70256386-70256405 MsG0880046186.01.T01:intron 45.0%
TCCCCAGCTGAAAATTCTTC+TGG - Chr8:70256303-70256322 MsG0880046186.01.T01:intron 45.0%
TTGGTGTGAAGAAAGGTCCA+TGG - Chr8:70255314-70255333 MsG0880046186.01.T01:three_prime_UTR 45.0%
! CTGTGACGAATTTTCTGCAG+GGG + Chr8:70256217-70256236 None:intergenic 45.0%
! GCTGTGACGAATTTTCTGCA+GGG + Chr8:70256218-70256237 None:intergenic 45.0%
! TTGCATTGGTCGTGAGCTAT+GGG - Chr8:70255268-70255287 MsG0880046186.01.T01:three_prime_UTR 45.0%
!! GAGTTTTATGCCTTCTTGGG+AGG - Chr8:70256464-70256483 MsG0880046186.01.T01:intron 45.0%
!!! TTTTTTTTTTTTTGTAAATA+TGG - Chr8:70255951-70255970 MsG0880046186.01.T01:CDS 5.0%
AGATTGCTTCACGGTTACCC+GGG - Chr8:70256061-70256080 MsG0880046186.01.T01:CDS 50.0%
CACCATTGGTGGAAGCTCTT+TGG - Chr8:70256397-70256416 MsG0880046186.01.T01:intron 50.0%
GGTGGTCGAAGATTGCTTCA+CGG - Chr8:70256052-70256071 MsG0880046186.01.T01:CDS 50.0%
GTAAGAGCTGTCGTCTTCGT+TGG - Chr8:70255434-70255453 MsG0880046186.01.T01:three_prime_UTR 50.0%
TCCCAAAGAGCTTCCACCAA+TGG + Chr8:70256402-70256421 None:intergenic 50.0%
TGATGGGGTTGTCAACTCAG+AGG - Chr8:70256266-70256285 MsG0880046186.01.T01:intron 50.0%
TTGTCTTCCTCAGCTGTCCA+TGG + Chr8:70255334-70255353 None:intergenic 50.0%
! CTTGCATTGGTCGTGAGCTA+TGG - Chr8:70255267-70255286 MsG0880046186.01.T01:three_prime_UTR 50.0%
! GGCTGTGACGAATTTTCTGC+AGG + Chr8:70256219-70256238 None:intergenic 50.0%
! GGTGGAAGCTCTTTGGGAAA+TGG - Chr8:70256404-70256423 MsG0880046186.01.T01:intron 50.0%
! TGCATTGGTCGTGAGCTATG+GGG - Chr8:70255269-70255288 MsG0880046186.01.T01:three_prime_UTR 50.0%
AGGTCTCCTCACTGAAGCAG+AGG - Chr8:70255486-70255505 MsG0880046186.01.T01:three_prime_UTR 55.0%
CGTGCTGTGCCTAAACTTGC+CGG - Chr8:70255397-70255416 MsG0880046186.01.T01:three_prime_UTR 55.0%
GAAAGGTCCATGGACAGCTG+AGG - Chr8:70255324-70255343 MsG0880046186.01.T01:three_prime_UTR 55.0%
GTTGATCTCCATGCCCGTCT+TGG - Chr8:70255520-70255539 MsG0880046186.01.T01:three_prime_UTR 55.0%
TGCCTAAACTTGCCGGCCTT+CGG - Chr8:70255404-70255423 MsG0880046186.01.T01:three_prime_UTR 55.0%
ACCTGTTGCCAAGACGGGCA+TGG + Chr8:70255531-70255550 None:intergenic 60.0%
GCTGCTCCTCTGCTTCAGTG+AGG + Chr8:70255495-70255514 None:intergenic 60.0%
TCCATGCCCGTCTTGGCAAC+AGG - Chr8:70255527-70255546 MsG0880046186.01.T01:three_prime_UTR 60.0%
CGCCGAAGGCCGGCAAGTTT+AGG + Chr8:70255409-70255428 None:intergenic 65.0%
! AGCTCTTACCGCAGCGCCGA+AGG + Chr8:70255423-70255442 None:intergenic 65.0%
! CTTACCGCAGCGCCGAAGGC+CGG + Chr8:70255419-70255438 None:intergenic 70.0%
CTTGCCGGCCTTCGGCGCTG+CGG - Chr8:70255412-70255431 MsG0880046186.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 70255245 70256976 70255245 ID=MsG0880046186.01;Name=MsG0880046186.01
Chr8 mRNA 70255245 70256976 70255245 ID=MsG0880046186.01.T01;Parent=MsG0880046186.01;Name=MsG0880046186.01.T01;_AED=0.43;_eAED=0.43;_QI=41|1|1|1|1|1|2|368|272
Chr8 exon 70255245 70256168 70255245 ID=MsG0880046186.01.T01:exon:27472;Parent=MsG0880046186.01.T01
Chr8 exon 70256673 70256976 70256673 ID=MsG0880046186.01.T01:exon:27471;Parent=MsG0880046186.01.T01
Chr8 five_prime_UTR 70256936 70256976 70256936 ID=MsG0880046186.01.T01:five_prime_utr;Parent=MsG0880046186.01.T01
Chr8 CDS 70256673 70256935 70256673 ID=MsG0880046186.01.T01:cds;Parent=MsG0880046186.01.T01
Chr8 CDS 70255613 70256168 70255613 ID=MsG0880046186.01.T01:cds;Parent=MsG0880046186.01.T01
Chr8 three_prime_UTR 70255245 70255612 70255245 ID=MsG0880046186.01.T01:three_prime_utr;Parent=MsG0880046186.01.T01
Gene Sequence

>MsG0880046186.01.T01

ATGGGGAGACAACCTTGTTGTGACAAACTTGGTGTGAAGAAAGGTCCATGGACAGCTGAGGAAGACAAGAAACTCATCACTTTTATTCTTACCAATGGACAATGTTGTTGGCGTGCTGTGCCTAAACTTGCCGGCCTTCGGCGCTGCGGTAAGAGCTGTCGTCTTCGTTGGACTAATTATCTTCGTCCTGATTTAAAGAGAGGTCTCCTCACTGAAGCAGAGGAGCAGCTTGTTGTTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCGAAGATTGCTTCACGGTTACCCGGGAGAACAGACAATGAGATTAAAAATCATTGGAACACACACATCAAGAAAAAGCTCATTAAGATGGGAATTGATCCCATTACTCATGAACCTTTGAATAAACAAGCATCATCCAATGATAGTAGTACTTCATCCCCTGCAGAAAATTCGTCACAGCCTGTTAACAACCATGAAGTGAAGGAAACTGATGGGGTTGTCAACTCAGAGGAGAATTCAAGCTCATCCCCAGCTGAAAATTCTTCTGGAGAAGAATCACTTTTGCTAGATAGCATTTGCAGTGACGATTCTCTAATGAATAGTATATGGTTGGATGAAACACCATTGGTGGAAGCTCTTTGGGAAATGGACACTACACCTATAGCAGAAAACACAAAAAATGACATGAGTTTTATGCCTTCTTGGGAGGATAATTGTGCTTGGCTATTTGATTGTCAGGACTTTGGTATTCATGACTTTGGATTTAATTGTTTCAATGAGATAGAGTCAAGTACACTGCAAACTATAGGGATGAAGGAAAATAAACATTAG

Protein sequence

>MsG0880046186.01.T01

MGRQPCCDKLGVKKGPWTAEEDKKLITFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVVDLHARLGNRWSKIASRLPGRTDNEIKNHWNTHIKKKLIKMGIDPITHEPLNKQASSNDSSTSSPAENSSQPVNNHEVKETDGVVNSEENSSSSPAENSSGEESLLLDSICSDDSLMNSIWLDETPLVEALWEMDTTPIAENTKNDMSFMPSWEDNCAWLFDCQDFGIHDFGFNCFNEIESSTLQTIGMKENKH*