Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016348.01.T01 | XP_003602022.1 | 99.449 | 363 | 2 | 0 | 1 | 363 | 1 | 363 | 0 | 751 |
| MsG0380016348.01.T02 | XP_027190368.1 | 91.724 | 145 | 12 | 0 | 19 | 163 | 2 | 146 | 6.83E-89 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016348.01.T01 | Q39237 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0 | 515 |
| MsG0380016348.01.T02 | Q39237 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.61E-45 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016348.01.T01 | G7J4F0 | 99.449 | 363 | 2 | 0 | 1 | 363 | 1 | 363 | 0.0 | 751 |
| MsG0380016348.01.T02 | A0A3Q7XRS9 | 91.724 | 145 | 12 | 0 | 19 | 163 | 2 | 146 | 3.26e-89 | 273 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380016348.01.T01 | TF | bZIP |
| MsG0380016348.01.T02 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000293.01 | MsG0380016348.01 | 0.810814 | 9.557209e-51 | 5.819127e-48 |
| MsG0180001117.01 | MsG0380016348.01 | 0.805350 | 1.393016e-49 | 7.353032e-47 |
| MsG0180002912.01 | MsG0380016348.01 | 0.806587 | 7.652376e-50 | 4.169224e-47 |
| MsG0180003337.01 | MsG0380016348.01 | 0.818924 | 1.520440e-52 | 1.153618e-49 |
| MsG0180003948.01 | MsG0380016348.01 | 0.847322 | 1.244155e-59 | 2.202902e-56 |
| MsG0180004005.01 | MsG0380016348.01 | 0.862092 | 6.472504e-64 | 1.872492e-60 |
| MsG0180004651.01 | MsG0380016348.01 | 0.831971 | 1.233512e-55 | 1.359933e-52 |
| MsG0180005614.01 | MsG0380016348.01 | 0.821068 | 4.914840e-53 | 3.957924e-50 |
| MsG0180005813.01 | MsG0380016348.01 | 0.819879 | 9.211804e-53 | 7.176641e-50 |
| MsG0180005842.01 | MsG0380016348.01 | 0.816811 | 4.562437e-52 | 3.265954e-49 |
| MsG0180006016.01 | MsG0380016348.01 | 0.810133 | 1.341125e-50 | 8.019586e-48 |
| MsG0280006356.01 | MsG0380016348.01 | 0.804783 | 1.830294e-49 | 9.521774e-47 |
| MsG0280010614.01 | MsG0380016348.01 | 0.832394 | 9.693226e-56 | 1.082040e-52 |
| MsG0280010957.01 | MsG0380016348.01 | 0.802259 | 6.107199e-49 | 2.977994e-46 |
| MsG0280011446.01 | MsG0380016348.01 | 0.809046 | 2.295921e-50 | 1.333960e-47 |
| MsG0380012124.01 | MsG0380016348.01 | 0.823286 | 1.503463e-53 | 1.288932e-50 |
| MsG0380014259.01 | MsG0380016348.01 | 0.803862 | 2.846399e-49 | 1.446102e-46 |
| MsG0380014365.01 | MsG0380016348.01 | 0.841512 | 4.541936e-58 | 6.689370e-55 |
| MsG0380014947.01 | MsG0380016348.01 | 0.838415 | 2.914466e-57 | 3.900971e-54 |
| MsG0380015181.01 | MsG0380016348.01 | 0.809246 | 2.079944e-50 | 1.215015e-47 |
| MsG0380015564.01 | MsG0380016348.01 | 0.809968 | 1.455488e-50 | 8.666277e-48 |
| MsG0380015713.01 | MsG0380016348.01 | 0.800190 | 1.619114e-48 | 7.491524e-46 |
| MsG0380015731.01 | MsG0380016348.01 | 0.802247 | 6.142489e-49 | 2.994345e-46 |
| MsG0380016273.01 | MsG0380016348.01 | 0.825744 | 3.966473e-54 | 3.647185e-51 |
| MsG0380016348.01 | MsG0380016553.01 | 0.831694 | 1.443327e-55 | 1.578303e-52 |
| MsG0380016348.01 | MsG0380017140.01 | 0.810297 | 1.236423e-50 | 7.424925e-48 |
| MsG0380016348.01 | MsG0380017403.01 | 0.818497 | 1.900564e-52 | 1.424987e-49 |
| MsG0380016348.01 | MsG0480018126.01 | 0.819560 | 1.089244e-52 | 8.410724e-50 |
| MsG0380016348.01 | MsG0480018160.01 | 0.865806 | 4.519902e-65 | 1.489849e-61 |
| MsG0380016348.01 | MsG0480018333.01 | 0.805759 | 1.143096e-49 | 6.098050e-47 |
| MsG0380016348.01 | MsG0480019816.01 | 0.819866 | 9.273082e-53 | 7.221733e-50 |
| MsG0380016348.01 | MsG0480020090.01 | 0.820083 | 8.273069e-53 | 6.482587e-50 |
| MsG0380016348.01 | MsG0480020445.01 | 0.801050 | 1.080870e-48 | 5.111914e-46 |
| MsG0380016348.01 | MsG0480021237.01 | 0.851607 | 7.950100e-61 | 1.617806e-57 |
| MsG0380016348.01 | MsG0480021464.01 | 0.800450 | 1.432860e-48 | 6.673790e-46 |
| MsG0380016348.01 | MsG0480022301.01 | 0.828943 | 6.786561e-55 | 6.845015e-52 |
| MsG0380016348.01 | MsG0480022467.01 | 0.803181 | 3.940670e-49 | 1.967240e-46 |
| MsG0380016348.01 | MsG0480022480.01 | 0.810015 | 1.422245e-50 | 8.479049e-48 |
| MsG0380016348.01 | MsG0480022551.01 | 0.836515 | 8.945067e-57 | 1.129804e-53 |
| MsG0380016348.01 | MsG0480022717.01 | 0.815137 | 1.078480e-51 | 7.373960e-49 |
| MsG0380016348.01 | MsG0480022971.01 | 0.824555 | 7.575121e-54 | 6.732763e-51 |
| MsG0380016348.01 | MsG0480023014.01 | 0.808502 | 3.001056e-50 | 1.718839e-47 |
| MsG0380016348.01 | MsG0480023165.01 | 0.801263 | 9.777370e-49 | 4.648830e-46 |
| MsG0380016348.01 | MsG0480023224.01 | 0.832544 | 8.898682e-56 | 9.977716e-53 |
| MsG0380016348.01 | MsG0580024035.01 | 0.807220 | 5.622194e-50 | 3.113813e-47 |
| MsG0380016348.01 | MsG0580024405.01 | 0.823156 | 1.611858e-53 | 1.376869e-50 |
| MsG0380016348.01 | MsG0580025989.01 | 0.835478 | 1.638996e-56 | 2.006647e-53 |
| MsG0380016348.01 | MsG0580026212.01 | 0.807025 | 6.184270e-50 | 3.407706e-47 |
| MsG0380016348.01 | MsG0580027129.01 | 0.822238 | 2.636269e-53 | 2.193986e-50 |
| MsG0380016348.01 | MsG0580027345.01 | 0.822088 | 2.856170e-53 | 2.366741e-50 |
| MsG0380016348.01 | MsG0680031651.01 | 0.824078 | 9.808540e-54 | 8.599227e-51 |
| MsG0380016348.01 | MsG0680033623.01 | 0.869615 | 2.712067e-66 | 1.024208e-62 |
| MsG0380016348.01 | MsG0680035777.01 | 0.828247 | 9.998483e-55 | 9.882545e-52 |
| MsG0380016348.01 | MsG0780036852.01 | 0.847318 | 1.247912e-59 | 2.209232e-56 |
| MsG0380016348.01 | MsG0780037109.01 | 0.801819 | 7.519790e-49 | 3.626028e-46 |
| MsG0380016348.01 | MsG0780037142.01 | 0.815856 | 7.460299e-52 | 5.202502e-49 |
| MsG0380016348.01 | MsG0780037515.01 | 0.826142 | 3.190120e-54 | 2.966700e-51 |
| MsG0380016348.01 | MsG0780039452.01 | 0.807943 | 3.947864e-50 | 2.228030e-47 |
| MsG0380016348.01 | MsG0780040442.01 | 0.848368 | 6.409885e-60 | 1.173636e-56 |
| MsG0380016348.01 | MsG0780040691.01 | 0.835628 | 1.501980e-56 | 1.847089e-53 |
| MsG0380016348.01 | MsG0780040723.01 | 0.800808 | 1.211537e-48 | 5.694226e-46 |
| MsG0380016348.01 | MsG0780041399.01 | 0.800151 | 1.648994e-48 | 7.622230e-46 |
| MsG0380016348.01 | MsG0780041754.01 | 0.826685 | 2.368868e-54 | 2.237228e-51 |
| MsG0380016348.01 | MsG0880041883.01 | 0.852195 | 5.412770e-61 | 1.122364e-57 |
| MsG0380016348.01 | MsG0880041969.01 | 0.806063 | 9.868979e-50 | 5.305677e-47 |
| MsG0380016348.01 | MsG0880042543.01 | 0.811729 | 6.052537e-51 | 3.775512e-48 |
| MsG0380016348.01 | MsG0880042967.01 | 0.823471 | 1.360901e-53 | 1.172824e-50 |
| MsG0380016348.01 | MsG0880043262.01 | 0.837818 | 4.151629e-57 | 5.456786e-54 |
| MsG0380016348.01 | MsG0880043745.01 | 0.807393 | 5.168149e-50 | 2.875241e-47 |
| MsG0380016348.01 | MsG0880043921.01 | 0.806080 | 9.785025e-50 | 5.262775e-47 |
| MsG0380016348.01 | MsG0880045118.01 | 0.817665 | 2.931687e-52 | 2.148327e-49 |
| MsG0380016348.01 | MsG0880046082.01 | 0.809845 | 1.547293e-50 | 9.183069e-48 |
| MsG0380016348.01 | MsG0880046132.01 | 0.832509 | 9.079636e-56 | 1.017003e-52 |
| MsG0380016348.01 | MsG0880046186.01 | 0.800709 | 1.269273e-48 | 5.950535e-46 |
| MsG0380016348.01 | MsG0880046317.01 | 0.869113 | 3.947261e-66 | 1.463866e-62 |
| MsG0380016348.01 | MsG0880046669.01 | 0.820483 | 6.696797e-53 | 5.305359e-50 |
| MsG0380016348.01 | MsG0880046753.01 | 0.819608 | 1.062455e-52 | 8.214338e-50 |
| MsG0380016348.01 | MsG0880047191.01 | 0.831768 | 1.384322e-55 | 1.517231e-52 |
| MsG0380016348.01 | MsG0880047515.01 | 0.839315 | 1.705468e-57 | 2.346328e-54 |
| MsG0380016348.01 | MsG0880047742.01 | 0.815912 | 7.247889e-52 | 5.062176e-49 |
| MsG0280007071.01 | MsG0380016348.01 | 0.849465 | 3.178718e-60 | 6.030833e-57 |
| MsG0280007564.01 | MsG0380016348.01 | 0.822097 | 2.842761e-53 | 2.356170e-50 |
| MsG0280007585.01 | MsG0380016348.01 | 0.805594 | 1.238000e-49 | 6.575898e-47 |
| MsG0280007648.01 | MsG0380016348.01 | 0.806858 | 6.704987e-50 | 3.678856e-47 |
| MsG0280008556.01 | MsG0380016348.01 | 0.809079 | 2.259147e-50 | 1.313750e-47 |
| MsG0280008856.01 | MsG0380016348.01 | 0.822535 | 2.249037e-53 | 1.887759e-50 |
| MsG0280010389.01 | MsG0380016348.01 | 0.865844 | 4.397365e-65 | 1.451401e-61 |
| MsG0280010447.01 | MsG0380016348.01 | 0.807343 | 5.293579e-50 | 2.941184e-47 |
| MsG0280010459.01 | MsG0380016348.01 | 0.827551 | 1.469468e-54 | 1.423244e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016348.01.T01 | MTR_3g087940 | 99.449 | 363 | 2 | 0 | 1 | 363 | 1 | 363 | 0.0 | 751 |
| MsG0380016348.01.T01 | MTR_8g091650 | 68.839 | 353 | 102 | 4 | 12 | 363 | 13 | 358 | 2.22e-176 | 494 |
| MsG0380016348.01.T01 | MTR_8g091650 | 62.468 | 389 | 102 | 5 | 12 | 363 | 13 | 394 | 3.10e-169 | 478 |
| MsG0380016348.01.T01 | MTR_8g091650 | 72.281 | 285 | 78 | 1 | 79 | 363 | 2 | 285 | 9.63e-153 | 431 |
| MsG0380016348.01.T01 | MTR_8g040120 | 56.269 | 327 | 125 | 4 | 43 | 361 | 150 | 466 | 4.49e-117 | 347 |
| MsG0380016348.01.T01 | MTR_3g073560 | 49.713 | 348 | 170 | 2 | 14 | 359 | 1 | 345 | 5.54e-114 | 344 |
| MsG0380016348.01.T01 | MTR_5g060950 | 49.858 | 351 | 165 | 3 | 14 | 358 | 1 | 346 | 4.78e-113 | 333 |
| MsG0380016348.01.T01 | MTR_7g089800 | 58.667 | 300 | 111 | 3 | 70 | 361 | 129 | 423 | 8.13e-113 | 335 |
| MsG0380016348.01.T01 | MTR_7g089800 | 58.667 | 300 | 111 | 3 | 70 | 361 | 158 | 452 | 1.29e-112 | 335 |
| MsG0380016348.01.T01 | MTR_5g054900 | 55.556 | 306 | 124 | 3 | 64 | 361 | 52 | 353 | 3.12e-111 | 328 |
| MsG0380016348.01.T01 | MTR_5g054900 | 55.556 | 306 | 124 | 3 | 64 | 361 | 133 | 434 | 2.18e-110 | 329 |
| MsG0380016348.01.T01 | MTR_2g086420 | 54.795 | 292 | 120 | 4 | 73 | 361 | 187 | 469 | 8.73e-109 | 327 |
| MsG0380016348.01.T01 | MTR_2g086420 | 54.795 | 292 | 120 | 4 | 73 | 361 | 186 | 468 | 9.55e-109 | 327 |
| MsG0380016348.01.T01 | MTR_5g054900 | 54.575 | 306 | 123 | 4 | 64 | 361 | 52 | 349 | 1.00e-106 | 317 |
| MsG0380016348.01.T01 | MTR_5g054900 | 54.575 | 306 | 123 | 4 | 64 | 361 | 163 | 460 | 3.20e-105 | 317 |
| MsG0380016348.01.T01 | MTR_7g092750 | 50.321 | 312 | 148 | 2 | 57 | 361 | 51 | 362 | 6.58e-104 | 310 |
| MsG0380016348.01.T01 | MTR_4g053250 | 46.991 | 349 | 155 | 6 | 30 | 361 | 126 | 461 | 2.36e-103 | 313 |
| MsG0380016348.01.T01 | MTR_7g092750 | 50.321 | 312 | 148 | 2 | 57 | 361 | 152 | 463 | 8.91e-103 | 311 |
| MsG0380016348.01.T01 | MTR_1g111310 | 55.401 | 287 | 124 | 2 | 79 | 361 | 421 | 707 | 2.77e-101 | 314 |
| MsG0380016348.01.T01 | MTR_1g111310 | 53.929 | 280 | 119 | 2 | 79 | 355 | 54 | 326 | 7.39e-88 | 279 |
| MsG0380016348.01.T01 | MTR_7g092750 | 45.513 | 312 | 137 | 3 | 57 | 361 | 152 | 437 | 2.49e-88 | 273 |
| MsG0380016348.01.T01 | MTR_0126s0080 | 50.385 | 260 | 120 | 3 | 64 | 314 | 200 | 459 | 1.72e-78 | 249 |
| MsG0380016348.01.T01 | MTR_3g044820 | 57.229 | 166 | 60 | 3 | 79 | 235 | 45 | 208 | 9.12e-60 | 192 |
| MsG0380016348.01.T01 | MTR_1g090370 | 38.806 | 201 | 98 | 5 | 160 | 354 | 47 | 228 | 6.20e-34 | 125 |
| MsG0380016348.01.T01 | MTR_1g111320 | 60.000 | 70 | 27 | 1 | 79 | 147 | 146 | 215 | 1.17e-17 | 81.3 |
| MsG0380016348.01.T01 | MTR_8g094690 | 25.957 | 235 | 139 | 5 | 150 | 349 | 14 | 248 | 1.03e-15 | 76.6 |
| MsG0380016348.01.T01 | MTR_7g068860 | 24.651 | 215 | 152 | 5 | 147 | 351 | 5 | 219 | 1.64e-14 | 72.8 |
| MsG0380016348.01.T01 | MTR_2g076140 | 23.182 | 220 | 135 | 3 | 151 | 350 | 4 | 209 | 2.75e-12 | 65.9 |
| MsG0380016348.01.T02 | MTR_3g087940 | 99.200 | 125 | 1 | 0 | 39 | 163 | 1 | 125 | 2.02e-84 | 253 |
| MsG0380016348.01.T02 | MTR_8g091650 | 60.684 | 117 | 39 | 3 | 50 | 165 | 13 | 123 | 2.47e-38 | 134 |
| MsG0380016348.01.T02 | MTR_8g091650 | 46.405 | 153 | 39 | 4 | 50 | 165 | 13 | 159 | 1.34e-31 | 117 |
| MsG0380016348.01.T02 | MTR_3g073560 | 48.246 | 114 | 54 | 2 | 52 | 163 | 1 | 111 | 4.76e-22 | 92.0 |
| MsG0380016348.01.T02 | MTR_5g060950 | 43.220 | 118 | 56 | 3 | 52 | 163 | 1 | 113 | 1.12e-19 | 84.7 |
| MsG0380016348.01.T02 | MTR_8g040120 | 57.831 | 83 | 30 | 1 | 81 | 163 | 150 | 227 | 2.15e-19 | 84.3 |
| MsG0380016348.01.T02 | MTR_7g089800 | 76.786 | 56 | 13 | 0 | 108 | 163 | 158 | 213 | 8.32e-19 | 82.8 |
| MsG0380016348.01.T02 | MTR_7g089800 | 76.786 | 56 | 13 | 0 | 108 | 163 | 129 | 184 | 9.63e-19 | 82.4 |
| MsG0380016348.01.T02 | MTR_0126s0080 | 69.841 | 63 | 18 | 1 | 102 | 163 | 200 | 262 | 1.22e-18 | 82.4 |
| MsG0380016348.01.T02 | MTR_5g054900 | 71.429 | 63 | 17 | 1 | 102 | 163 | 133 | 195 | 1.46e-18 | 82.0 |
| MsG0380016348.01.T02 | MTR_2g086420 | 77.778 | 54 | 11 | 1 | 111 | 163 | 186 | 239 | 1.80e-18 | 82.0 |
| MsG0380016348.01.T02 | MTR_2g086420 | 77.778 | 54 | 11 | 1 | 111 | 163 | 187 | 240 | 1.82e-18 | 82.0 |
| MsG0380016348.01.T02 | MTR_5g054900 | 71.429 | 63 | 17 | 1 | 102 | 163 | 52 | 114 | 2.05e-18 | 80.9 |
| MsG0380016348.01.T02 | MTR_7g092750 | 62.319 | 69 | 26 | 0 | 95 | 163 | 152 | 220 | 2.49e-18 | 81.3 |
| MsG0380016348.01.T02 | MTR_7g092750 | 62.319 | 69 | 26 | 0 | 95 | 163 | 51 | 119 | 2.77e-18 | 80.9 |
| MsG0380016348.01.T02 | MTR_7g092750 | 62.319 | 69 | 26 | 0 | 95 | 163 | 152 | 220 | 2.92e-18 | 81.3 |
| MsG0380016348.01.T02 | MTR_1g111320 | 78.723 | 47 | 10 | 0 | 117 | 163 | 146 | 192 | 8.03e-17 | 75.1 |
| MsG0380016348.01.T02 | MTR_3g044820 | 78.723 | 47 | 10 | 0 | 117 | 163 | 45 | 91 | 1.11e-16 | 74.3 |
| MsG0380016348.01.T02 | MTR_5g054900 | 71.186 | 59 | 16 | 1 | 102 | 159 | 163 | 221 | 2.31e-16 | 75.9 |
| MsG0380016348.01.T02 | MTR_5g054900 | 71.186 | 59 | 16 | 1 | 102 | 159 | 52 | 110 | 2.80e-16 | 75.1 |
| MsG0380016348.01.T02 | MTR_1g111310 | 78.723 | 47 | 10 | 0 | 117 | 163 | 421 | 467 | 7.91e-16 | 74.3 |
| MsG0380016348.01.T02 | MTR_1g111310 | 80.488 | 41 | 8 | 0 | 117 | 157 | 54 | 94 | 5.70e-13 | 66.2 |
| MsG0380016348.01.T02 | MTR_4g053250 | 46.018 | 113 | 41 | 4 | 68 | 163 | 126 | 235 | 2.01e-15 | 73.2 |
| MsG0380016348.01.T02 | MTR_8g091650 | 69.388 | 49 | 15 | 0 | 117 | 165 | 2 | 50 | 2.68e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G65210 | 67.663 | 368 | 114 | 2 | 1 | 363 | 1 | 368 | 0.0 | 515 |
| MsG0380016348.01.T01 | AT5G10030 | 68.767 | 365 | 111 | 2 | 1 | 363 | 1 | 364 | 0.0 | 512 |
| MsG0380016348.01.T01 | AT5G10030 | 68.767 | 365 | 111 | 2 | 1 | 363 | 1 | 364 | 0.0 | 512 |
| MsG0380016348.01.T01 | AT5G10030 | 68.767 | 365 | 111 | 2 | 1 | 363 | 1 | 364 | 0.0 | 512 |
| MsG0380016348.01.T01 | AT5G10030 | 68.767 | 365 | 111 | 2 | 1 | 363 | 1 | 364 | 0.0 | 512 |
| MsG0380016348.01.T01 | AT5G10030 | 68.767 | 365 | 111 | 2 | 1 | 363 | 1 | 364 | 0.0 | 512 |
| MsG0380016348.01.T01 | AT5G65210 | 73.064 | 297 | 78 | 1 | 69 | 363 | 2 | 298 | 1.67e-160 | 452 |
| MsG0380016348.01.T01 | AT1G77920 | 56.764 | 377 | 136 | 7 | 2 | 363 | 4 | 368 | 8.88e-143 | 409 |
| MsG0380016348.01.T01 | AT1G22070 | 56.557 | 366 | 143 | 4 | 12 | 361 | 17 | 382 | 1.93e-135 | 391 |
| MsG0380016348.01.T01 | AT5G06950 | 59.516 | 289 | 107 | 2 | 79 | 361 | 46 | 330 | 2.16e-113 | 333 |
| MsG0380016348.01.T01 | AT5G06950 | 59.516 | 289 | 107 | 2 | 79 | 361 | 46 | 330 | 2.16e-113 | 333 |
| MsG0380016348.01.T01 | AT5G06950 | 59.516 | 289 | 107 | 2 | 79 | 361 | 46 | 330 | 2.16e-113 | 333 |
| MsG0380016348.01.T01 | AT5G06950 | 59.516 | 289 | 107 | 2 | 79 | 361 | 46 | 330 | 2.16e-113 | 333 |
| MsG0380016348.01.T01 | AT5G06950 | 59.516 | 289 | 107 | 2 | 79 | 361 | 46 | 330 | 2.16e-113 | 333 |
| MsG0380016348.01.T01 | AT3G12250 | 54.268 | 328 | 131 | 4 | 49 | 361 | 7 | 330 | 2.13e-112 | 331 |
| MsG0380016348.01.T01 | AT3G12250 | 54.268 | 328 | 131 | 4 | 49 | 361 | 7 | 330 | 2.13e-112 | 331 |
| MsG0380016348.01.T01 | AT3G12250 | 54.268 | 328 | 131 | 4 | 49 | 361 | 7 | 330 | 2.13e-112 | 331 |
| MsG0380016348.01.T01 | AT3G12250 | 54.268 | 328 | 131 | 4 | 49 | 361 | 7 | 330 | 2.13e-112 | 331 |
| MsG0380016348.01.T01 | AT3G12250 | 55.305 | 311 | 129 | 2 | 57 | 361 | 18 | 324 | 1.93e-111 | 328 |
| MsG0380016348.01.T01 | AT3G12250 | 57.191 | 299 | 114 | 3 | 73 | 361 | 9 | 303 | 3.57e-111 | 327 |
| MsG0380016348.01.T01 | AT5G06960 | 58.824 | 289 | 109 | 2 | 79 | 361 | 26 | 310 | 8.13e-111 | 326 |
| MsG0380016348.01.T01 | AT5G06960 | 58.824 | 289 | 109 | 2 | 79 | 361 | 46 | 330 | 9.62e-111 | 327 |
| MsG0380016348.01.T01 | AT5G06960 | 58.824 | 289 | 109 | 2 | 79 | 361 | 46 | 330 | 9.62e-111 | 327 |
| MsG0380016348.01.T01 | AT3G12250 | 55.305 | 311 | 129 | 2 | 57 | 361 | 49 | 355 | 1.37e-110 | 327 |
| MsG0380016348.01.T01 | AT1G08320 | 56.098 | 287 | 111 | 3 | 79 | 361 | 54 | 329 | 9.75e-110 | 325 |
| MsG0380016348.01.T01 | AT1G08320 | 56.098 | 287 | 111 | 3 | 79 | 361 | 54 | 329 | 9.75e-110 | 325 |
| MsG0380016348.01.T01 | AT1G08320 | 56.098 | 287 | 111 | 3 | 79 | 361 | 178 | 453 | 3.35e-108 | 325 |
| MsG0380016348.01.T01 | AT1G08320 | 56.098 | 287 | 111 | 3 | 79 | 361 | 178 | 453 | 3.35e-108 | 325 |
| MsG0380016348.01.T01 | AT1G08320 | 56.098 | 287 | 111 | 3 | 79 | 361 | 178 | 453 | 3.35e-108 | 325 |
| MsG0380016348.01.T01 | AT5G06839 | 49.538 | 325 | 147 | 4 | 52 | 361 | 93 | 415 | 4.67e-102 | 307 |
| MsG0380016348.01.T01 | AT5G06839 | 49.387 | 326 | 147 | 4 | 52 | 361 | 93 | 416 | 7.20e-102 | 307 |
| MsG0380016348.01.T01 | AT5G06839 | 52.685 | 298 | 126 | 3 | 79 | 361 | 161 | 458 | 1.12e-101 | 308 |
| MsG0380016348.01.T01 | AT1G68640 | 52.922 | 308 | 136 | 3 | 61 | 361 | 147 | 452 | 3.67e-99 | 301 |
| MsG0380016348.01.T01 | AT1G58330 | 26.126 | 222 | 151 | 4 | 143 | 351 | 2 | 223 | 1.04e-18 | 84.3 |
| MsG0380016348.01.T01 | AT3G14880 | 26.126 | 222 | 129 | 7 | 147 | 343 | 6 | 217 | 1.04e-12 | 67.4 |
| MsG0380016348.01.T01 | AT3G14880 | 25.328 | 229 | 129 | 7 | 147 | 343 | 6 | 224 | 7.69e-12 | 65.1 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G65210 | 61.538 | 130 | 45 | 2 | 39 | 163 | 1 | 130 | 1.64e-46 | 155 |
| MsG0380016348.01.T02 | AT5G10030 | 62.205 | 127 | 45 | 2 | 39 | 163 | 1 | 126 | 7.42e-44 | 149 |
| MsG0380016348.01.T02 | AT5G10030 | 62.205 | 127 | 45 | 2 | 39 | 163 | 1 | 126 | 7.42e-44 | 149 |
| MsG0380016348.01.T02 | AT5G10030 | 62.205 | 127 | 45 | 2 | 39 | 163 | 1 | 126 | 7.42e-44 | 149 |
| MsG0380016348.01.T02 | AT5G10030 | 62.205 | 127 | 45 | 2 | 39 | 163 | 1 | 126 | 7.42e-44 | 149 |
| MsG0380016348.01.T02 | AT5G10030 | 62.205 | 127 | 45 | 2 | 39 | 163 | 1 | 126 | 7.42e-44 | 149 |
| MsG0380016348.01.T02 | AT1G77920 | 49.645 | 141 | 54 | 5 | 37 | 163 | 2 | 139 | 1.72e-28 | 108 |
| MsG0380016348.01.T02 | AT5G65210 | 81.356 | 59 | 9 | 1 | 107 | 163 | 2 | 60 | 3.01e-22 | 90.9 |
| MsG0380016348.01.T02 | AT1G22070 | 46.094 | 128 | 55 | 2 | 50 | 163 | 17 | 144 | 1.53e-20 | 87.4 |
| MsG0380016348.01.T02 | AT3G12250 | 58.140 | 86 | 27 | 2 | 87 | 163 | 7 | 92 | 1.88e-19 | 83.6 |
| MsG0380016348.01.T02 | AT3G12250 | 58.140 | 86 | 27 | 2 | 87 | 163 | 7 | 92 | 1.88e-19 | 83.6 |
| MsG0380016348.01.T02 | AT3G12250 | 58.140 | 86 | 27 | 2 | 87 | 163 | 7 | 92 | 1.88e-19 | 83.6 |
| MsG0380016348.01.T02 | AT3G12250 | 58.140 | 86 | 27 | 2 | 87 | 163 | 7 | 92 | 1.88e-19 | 83.6 |
| MsG0380016348.01.T02 | AT3G12250 | 63.768 | 69 | 25 | 0 | 95 | 163 | 18 | 86 | 1.39e-18 | 81.3 |
| MsG0380016348.01.T02 | AT3G12250 | 63.768 | 69 | 25 | 0 | 95 | 163 | 49 | 117 | 1.48e-18 | 81.6 |
| MsG0380016348.01.T02 | AT3G12250 | 75.439 | 57 | 10 | 1 | 111 | 163 | 9 | 65 | 4.97e-18 | 79.3 |
| MsG0380016348.01.T02 | AT5G06960 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.00e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06960 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.00e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06950 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.15e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06950 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.15e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06950 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.15e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06950 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.15e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06950 | 87.234 | 47 | 6 | 0 | 117 | 163 | 46 | 92 | 5.15e-18 | 79.7 |
| MsG0380016348.01.T02 | AT5G06960 | 65.217 | 69 | 24 | 0 | 95 | 163 | 4 | 72 | 5.74e-18 | 79.3 |
| MsG0380016348.01.T02 | AT1G68640 | 63.636 | 66 | 23 | 1 | 99 | 163 | 147 | 212 | 4.37e-17 | 77.8 |
| MsG0380016348.01.T02 | AT1G08320 | 85.106 | 47 | 7 | 0 | 117 | 163 | 178 | 224 | 5.43e-17 | 77.8 |
| MsG0380016348.01.T02 | AT1G08320 | 85.106 | 47 | 7 | 0 | 117 | 163 | 178 | 224 | 5.43e-17 | 77.8 |
| MsG0380016348.01.T02 | AT1G08320 | 85.106 | 47 | 7 | 0 | 117 | 163 | 178 | 224 | 5.43e-17 | 77.8 |
| MsG0380016348.01.T02 | AT1G08320 | 85.106 | 47 | 7 | 0 | 117 | 163 | 54 | 100 | 6.14e-17 | 77.0 |
| MsG0380016348.01.T02 | AT1G08320 | 85.106 | 47 | 7 | 0 | 117 | 163 | 54 | 100 | 6.14e-17 | 77.0 |
| MsG0380016348.01.T02 | AT5G06839 | 80.851 | 47 | 9 | 0 | 117 | 163 | 161 | 207 | 1.36e-16 | 76.6 |
| MsG0380016348.01.T02 | AT5G06839 | 80.851 | 47 | 9 | 0 | 117 | 163 | 118 | 164 | 1.83e-16 | 75.9 |
| MsG0380016348.01.T02 | AT5G06839 | 80.851 | 47 | 9 | 0 | 117 | 163 | 118 | 164 | 1.87e-16 | 75.9 |
Find 111 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGTAAATAAATTAATTT+TGG | 0.164639 | 3:+82296692 | MsG0380016348.01.T01:three_prime_UTR |
| AAGAGTGTTTGTAATGTTAT+TGG | 0.192356 | 3:-82293337 | None:intergenic |
| AGCTCGATGTTTGCTTGCTT+TGG | 0.213054 | 3:+82296416 | MsG0380016348.01.T01:CDS |
| TTGATTTAATTGCAGATTCT+TGG | 0.226068 | 3:+82295814 | MsG0380016348.01.T01:intron |
| CATTTCACAATAAGGTTATA+TGG | 0.238582 | 3:-82293231 | None:intergenic |
| TCTATAGCAAACTGCAATTA+AGG | 0.246859 | 3:-82294317 | None:intergenic |
| AAAACTGCAGGGAATGTATA+TGG | 0.249625 | 3:+82295167 | MsG0380016348.01.T01:intron |
| TTTCATTTCATTTCACAATA+AGG | 0.288452 | 3:-82293239 | None:intergenic |
| CCTAAACCACACATTGTATA+TGG | 0.292874 | 3:-82296596 | None:intergenic |
| CAAGTCCGCCTCATCAATTA+AGG | 0.315142 | 3:-82294509 | None:intergenic |
| TTCTCATTTCCGAGATTTGC+CGG | 0.317139 | 3:-82295393 | None:intergenic |
| TTAATTGCAGTTTGCTATAG+AGG | 0.320466 | 3:+82294319 | MsG0380016348.01.T01:intron |
| GCAGCCTTTGAGATGGAGTA+TGG | 0.346430 | 3:+82295349 | MsG0380016348.01.T01:CDS |
| GCTCGATGTTTGCTTGCTTT+GGG | 0.348084 | 3:+82296417 | MsG0380016348.01.T01:CDS |
| TCTGTCAATGGTTCAATCAT+TGG | 0.390810 | 3:-82295838 | None:intergenic |
| CCATATACAATGTGTGGTTT+AGG | 0.401655 | 3:+82296596 | MsG0380016348.01.T01:three_prime_UTR |
| AATATTATAGAAAGTTGAAA+TGG | 0.410564 | 3:-82293366 | None:intergenic |
| CTTCTCCCCACATATTAATC+TGG | 0.429966 | 3:-82294450 | None:intergenic |
| CACATATTAATCTGGTGAAT+AGG | 0.436108 | 3:-82294442 | None:intergenic |
| TTTAACAGGCTGACCATCTT+CGG | 0.437689 | 3:+82296346 | MsG0380016348.01.T01:intron |
| AACAAGACTAAGCAGGTTCT+CGG | 0.440007 | 3:-82296491 | None:intergenic |
| ATTGGGTTGATGAGCAAAAC+CGG | 0.440031 | 3:+82295374 | MsG0380016348.01.T01:CDS |
| AATGTATATGGGTGGTGGGT+TGG | 0.443309 | 3:+82295179 | MsG0380016348.01.T01:CDS |
| ACAAGACTAAGCAGGTTCTC+GGG | 0.443620 | 3:-82296490 | None:intergenic |
| TTGTAATGTTATTGGAGAAT+GGG | 0.444379 | 3:-82293329 | None:intergenic |
| CTTGAAGTTTGATAGTAGTC+AGG | 0.454381 | 3:+82294528 | MsG0380016348.01.T01:CDS |
| TTCGATAGATTTCAGCATAG+TGG | 0.456188 | 3:-82295477 | None:intergenic |
| AATCGTTGTTGCTCTGTCAA+TGG | 0.456266 | 3:-82295850 | None:intergenic |
| TCTTGTGAGCTTTGTGAACC+AGG | 0.458406 | 3:+82296035 | MsG0380016348.01.T01:CDS |
| AGCTCAAAGCCCTCAGGCGT+TGG | 0.459290 | 3:-82296449 | None:intergenic |
| TACAATTTAGCTTACTCGGT+TGG | 0.463258 | 3:-82292512 | None:intergenic |
| GAGCTCAGGATGCTGGTTGA+TGG | 0.463581 | 3:+82295445 | MsG0380016348.01.T01:CDS |
| TGAGATGGAGTATGGACATT+GGG | 0.465713 | 3:+82295357 | MsG0380016348.01.T01:CDS |
| CACAGTTTGTTTCCTCGAGA+AGG | 0.467650 | 3:+82294404 | MsG0380016348.01.T01:CDS |
| TTTGTAATGTTATTGGAGAA+TGG | 0.474133 | 3:-82293330 | None:intergenic |
| TATAGAAAGTTGAAATGGAT+GGG | 0.474395 | 3:-82293361 | None:intergenic |
| TGAGGGCTTTGAGCTCACTA+TGG | 0.474812 | 3:+82296457 | MsG0380016348.01.T01:CDS |
| TCGTTTGAAGTTAGTGCAGT+TGG | 0.476876 | 3:+82295009 | MsG0380016348.01.T01:CDS |
| TTTGCTGGACCTGTGAATCC+AGG | 0.482156 | 3:+82295219 | MsG0380016348.01.T01:CDS |
| CGCCTCATCAATTAAGGGAA+TGG | 0.487369 | 3:-82294503 | None:intergenic |
| GTTTCTCCATGCCTTGTGAA+AGG | 0.488025 | 3:-82295918 | None:intergenic |
| GCAAGGTTTCCTGCCGAAGA+TGG | 0.491320 | 3:-82296359 | None:intergenic |
| AAGATAGCTATAGCTTCTAA+AGG | 0.491467 | 3:+82293609 | MsG0380016348.01.T01:five_prime_UTR |
| TTTCTCCATGCCTTGTGAAA+GGG | 0.491745 | 3:-82295917 | None:intergenic |
| CTCGCTGATAGCGTAGCAGC+TGG | 0.502070 | 3:+82295952 | MsG0380016348.01.T01:CDS |
| CAGGGAATGTATATGGGTGG+TGG | 0.504131 | 3:+82295174 | MsG0380016348.01.T01:intron |
| AAGTCCGCCTCATCAATTAA+GGG | 0.508625 | 3:-82294508 | None:intergenic |
| ATTGACAGAGCAACAACGAT+TGG | 0.518816 | 3:+82295852 | MsG0380016348.01.T01:CDS |
| TATGAGTCTCTCTTTGAAGA+TGG | 0.519256 | 3:+82293509 | MsG0380016348.01.T01:five_prime_UTR |
| ACAAACCAACCTGGATTCAC+AGG | 0.524884 | 3:-82295228 | None:intergenic |
| TCGCCCTTCTGAGCTTCTCA+AGG | 0.526161 | 3:+82295594 | MsG0380016348.01.T01:CDS |
| TGACATAGAGCTCAGGATGC+TGG | 0.526532 | 3:+82295438 | MsG0380016348.01.T01:CDS |
| ACAGGCTGACCATCTTCGGC+AGG | 0.532331 | 3:+82296350 | MsG0380016348.01.T01:intron |
| TTATAGAAAGTTGAAATGGA+TGG | 0.532934 | 3:-82293362 | None:intergenic |
| CAGATTAATATGTGGGGAGA+AGG | 0.534968 | 3:+82294451 | MsG0380016348.01.T01:CDS |
| ATCACCTTGAGAAGCTCAGA+AGG | 0.537726 | 3:-82295598 | None:intergenic |
| TCCACAGATGGCTACTGCAA+TGG | 0.537758 | 3:+82295999 | MsG0380016348.01.T01:CDS |
| AGAATATTTCCAACGCCTGA+GGG | 0.537877 | 3:+82296440 | MsG0380016348.01.T01:CDS |
| AGGAATTGCAGCCTTTGAGA+TGG | 0.538267 | 3:+82295342 | MsG0380016348.01.T01:intron |
| AAACTGCAGGGAATGTATAT+GGG | 0.538541 | 3:+82295168 | MsG0380016348.01.T01:intron |
| TGAGCAAAACCGGCAAATCT+CGG | 0.539595 | 3:+82295384 | MsG0380016348.01.T01:CDS |
| AGATGCCCTTTCACAAGGCA+TGG | 0.540096 | 3:+82295912 | MsG0380016348.01.T01:CDS |
| GTTGGTAACAAGATTTGAGC+GGG | 0.544320 | 3:+82293579 | MsG0380016348.01.T01:five_prime_UTR |
| GCTCGAACGTGTTAGACAGC+AGG | 0.550918 | 3:+82295039 | MsG0380016348.01.T01:CDS |
| AACGTGTTAGACAGCAGGTG+TGG | 0.552196 | 3:+82295044 | MsG0380016348.01.T01:intron |
| TATTCACCAGATTAATATGT+GGG | 0.557449 | 3:+82294444 | MsG0380016348.01.T01:CDS |
| TGTTCGCGACATTTGTTGCA+AGG | 0.557667 | 3:-82296376 | None:intergenic |
| TTGAGATGGAGTATGGACAT+TGG | 0.559206 | 3:+82295356 | MsG0380016348.01.T01:CDS |
| CTATTCACCAGATTAATATG+TGG | 0.559375 | 3:+82294443 | MsG0380016348.01.T01:CDS |
| ATAGTGAGCTCAAAGCCCTC+AGG | 0.562814 | 3:-82296455 | None:intergenic |
| GCAGCTGGACAATTCATTGA+AGG | 0.563520 | 3:+82295967 | MsG0380016348.01.T01:CDS |
| AGGGAATGTATATGGGTGGT+GGG | 0.568452 | 3:+82295175 | MsG0380016348.01.T01:intron |
| GAGAATATTTCCAACGCCTG+AGG | 0.568747 | 3:+82296439 | MsG0380016348.01.T01:CDS |
| ACGTGTTAGACAGCAGGTGT+GGG | 0.571401 | 3:+82295045 | MsG0380016348.01.T01:intron |
| GGAGAAGGCTTCAAAAGTAA+TGG | 0.571903 | 3:+82294466 | MsG0380016348.01.T01:CDS |
| GACGGCGAATTCATGCTCAA+TGG | 0.573598 | 3:-82294379 | None:intergenic |
| TCTCCACAACAAAAGACTGC+AGG | 0.574821 | 3:-82296633 | None:intergenic |
| CTTGTTGACATGATTGTCCA+AGG | 0.580404 | 3:-82295885 | None:intergenic |
| TCCATTGCAGTAGCCATCTG+TGG | 0.581181 | 3:-82296000 | None:intergenic |
| ATCCATTCCCTTAATTGATG+AGG | 0.582525 | 3:+82294501 | MsG0380016348.01.T01:CDS |
| TGTAATGTTATTGGAGAATG+GGG | 0.582747 | 3:-82293328 | None:intergenic |
| AATATGAAACGTGATGAGTA+TGG | 0.582987 | 3:+82296545 | MsG0380016348.01.T01:three_prime_UTR |
| CGATTGGATATCGATAACCT+TGG | 0.584683 | 3:+82295868 | MsG0380016348.01.T01:CDS |
| AGGAACTTATATTCCACAGA+TGG | 0.586141 | 3:+82295987 | MsG0380016348.01.T01:CDS |
| ATTGAAGACTGATTTAATTG+CGG | 0.586307 | 3:+82294345 | MsG0380016348.01.T01:five_prime_UTR |
| CATTCCCTTAATTGATGAGG+CGG | 0.591538 | 3:+82294504 | MsG0380016348.01.T01:CDS |
| GTATTAGTGACATAGAGCTC+AGG | 0.591773 | 3:+82295431 | MsG0380016348.01.T01:CDS |
| TATTGGAGAATGGGGAGTGG+TGG | 0.592334 | 3:-82293320 | None:intergenic |
| ATAGAAAGTTGAAATGGATG+GGG | 0.597213 | 3:-82293360 | None:intergenic |
| CTCAAATCTTGTTACCAACA+TGG | 0.598716 | 3:-82293575 | None:intergenic |
| AAATTAGTCTGTGTGAAAGT+TGG | 0.599465 | 3:+82296762 | MsG0380016348.01.T01:three_prime_UTR |
| ATTGGTCATCATCACCATGT+TGG | 0.602722 | 3:+82293561 | MsG0380016348.01.T01:five_prime_UTR |
| TGTTATTGGAGAATGGGGAG+TGG | 0.606277 | 3:-82293323 | None:intergenic |
| GCAGAAGATGCCCTTTCACA+AGG | 0.607214 | 3:+82295907 | MsG0380016348.01.T01:CDS |
| TCAAAACCATATACAATGTG+TGG | 0.611088 | 3:+82296590 | MsG0380016348.01.T01:three_prime_UTR |
| GTCTTGCAACAAGACTAAGC+AGG | 0.618652 | 3:-82296498 | None:intergenic |
| CAAGACTAAGCAGGTTCTCG+GGG | 0.624393 | 3:-82296489 | None:intergenic |
| GCAAACATCGAGCTGACTGA+CGG | 0.633030 | 3:-82296407 | None:intergenic |
| GAGGAAACAAACTGTGCGGA+CGG | 0.640938 | 3:-82294397 | None:intergenic |
| ATGTCCATACTCCATCTCAA+AGG | 0.641308 | 3:-82295353 | None:intergenic |
| TTTATGTGATGTCCGGCATG+TGG | 0.642596 | 3:+82295530 | MsG0380016348.01.T01:CDS |
| CGTGTTAGACAGCAGGTGTG+GGG | 0.644963 | 3:+82295046 | MsG0380016348.01.T01:intron |
| ATACACACTCATCCTTCTCG+AGG | 0.650671 | 3:-82294416 | None:intergenic |
| TGTTGGTAACAAGATTTGAG+CGG | 0.659293 | 3:+82293578 | MsG0380016348.01.T01:five_prime_UTR |
| CACAAGGCATGGAGAAACTG+CGG | 0.659798 | 3:+82295923 | MsG0380016348.01.T01:CDS |
| TCACCTTGAGAAGCTCAGAA+GGG | 0.664994 | 3:-82295597 | None:intergenic |
| CTGCAGGGAATGTATATGGG+TGG | 0.681880 | 3:+82295171 | MsG0380016348.01.T01:intron |
| ATTCACCAGATTAATATGTG+GGG | 0.681960 | 3:+82294445 | MsG0380016348.01.T01:CDS |
| GTCCGGCATGTGGAAAACAA+CGG | 0.755517 | 3:+82295540 | MsG0380016348.01.T01:CDS |
| TCTCGAGGAAACAAACTGTG+CGG | 0.757278 | 3:-82294401 | None:intergenic |
| AGACTGATTTAATTGCGGCG+CGG | 0.780685 | 3:+82294350 | MsG0380016348.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAATAATGATAAGA+AGG | + | Chr3:82293009-82293028 | MsG0380016348.01.T02:intron | 10.0% |
| !! | GTACAATATAAATATAAAAA+TGG | - | Chr3:82293458-82293477 | None:intergenic | 10.0% |
| !! | TAATATAATAATGATAAGAA+GGG | + | Chr3:82293010-82293029 | MsG0380016348.01.T02:intron | 10.0% |
| !! | TTTATTAAATTGAAAAGTAA+TGG | - | Chr3:82296085-82296104 | None:intergenic | 10.0% |
| !!! | ATTAATATAATTTTAATTCG+AGG | + | Chr3:82293695-82293714 | MsG0380016348.01.T01:intron | 10.0% |
| !!! | ATTAATTTTAGTACAAATAT+AGG | - | Chr3:82293916-82293935 | None:intergenic | 10.0% |
| !!! | GTTTGTAAATAAATTAATTT+TGG | + | Chr3:82296692-82296711 | MsG0380016348.01.T01:three_prime_UTR | 10.0% |
| !! | AATATAAAAATGGAAATGAA+AGG | - | Chr3:82293448-82293467 | None:intergenic | 15.0% |
| !! | AATATTATAGAAAGTTGAAA+TGG | - | Chr3:82293369-82293388 | None:intergenic | 15.0% |
| !! | ATATTATTATGTCAAGAAAT+AGG | - | Chr3:82292996-82293015 | None:intergenic | 15.0% |
| !! | TATTATTATGTCAAGAAATA+GGG | - | Chr3:82292995-82293014 | None:intergenic | 15.0% |
| !! | TTTAATTCCATATTCAATTA+TGG | + | Chr3:82295751-82295770 | MsG0380016348.01.T01:intron | 15.0% |
| !!! | AAGAAAAAAAAGTACAAAAT+AGG | - | Chr3:82294020-82294039 | None:intergenic | 15.0% |
| !!! | GTATATGTTTATTTTATAAC+CGG | + | Chr3:82296237-82296256 | MsG0380016348.01.T01:intron | 15.0% |
| !!! | TATATGTTTATTTTATAACC+GGG | + | Chr3:82296238-82296257 | MsG0380016348.01.T01:intron | 15.0% |
| !! | AAATTTATAATGTAGTATGG+TGG | + | Chr3:82295780-82295799 | MsG0380016348.01.T01:intron | 20.0% |
| !! | AGTTAAATATGTGATTCTAA+TGG | - | Chr3:82296316-82296335 | None:intergenic | 20.0% |
| !! | CATATCATAAGATAGATATA+TGG | - | Chr3:82293773-82293792 | None:intergenic | 20.0% |
| !! | GACAAATTTATAATGTAGTA+TGG | + | Chr3:82295777-82295796 | MsG0380016348.01.T01:intron | 20.0% |
| !! | TACTAAAAAAGTTGAATAAG+TGG | + | Chr3:82294120-82294139 | MsG0380016348.01.T01:intron | 20.0% |
| !! | TATAAAACATGAATCCAATT+TGG | - | Chr3:82294616-82294635 | None:intergenic | 20.0% |
| !! | TTTATTGCCTATTAAAATCA+AGG | + | Chr3:82294073-82294092 | MsG0380016348.01.T01:intron | 20.0% |
| !! | TTTCATTTCATTTCACAATA+AGG | - | Chr3:82293242-82293261 | None:intergenic | 20.0% |
| !!! | ATAAGATAGATATATGGTTT+TGG | - | Chr3:82293767-82293786 | None:intergenic | 20.0% |
| !!! | TAAATACAATTTAGCTTACT+CGG | - | Chr3:82292519-82292538 | None:intergenic | 20.0% |
| !!! | TAACTGGTCTATAAAAAATT+TGG | + | Chr3:82293881-82293900 | MsG0380016348.01.T01:intron | 20.0% |
| !!! | TACAATTTTATCATCAAATC+AGG | - | Chr3:82293953-82293972 | None:intergenic | 20.0% |
| !!! | TGAAATTCCTTGATTTTAAT+AGG | - | Chr3:82294083-82294102 | None:intergenic | 20.0% |
| !!! | TTTTGTACTTTTTTTTCTTC+TGG | + | Chr3:82294021-82294040 | MsG0380016348.01.T01:intron | 20.0% |
| ! | AAACATACATGATTTGATCA+CGG | - | Chr3:82296201-82296220 | None:intergenic | 25.0% |
| ! | AGAGAAAGGAAAAAAATAAC+TGG | + | Chr3:82293865-82293884 | MsG0380016348.01.T01:intron | 25.0% |
| ! | ATTCTGCTTATTAACCAAAT+TGG | + | Chr3:82294599-82294618 | MsG0380016348.01.T01:intron | 25.0% |
| ! | CATTTCACAATAAGGTTATA+TGG | - | Chr3:82293234-82293253 | None:intergenic | 25.0% |
| ! | GAAAATGCATCTTTCATAAA+GGG | - | Chr3:82292690-82292709 | None:intergenic | 25.0% |
| ! | GAACATGAAGAATTTGTATT+CGG | + | Chr3:82294723-82294742 | MsG0380016348.01.T01:intron | 25.0% |
| ! | GATAATAAGTTAGTGACAAA+TGG | - | Chr3:82296159-82296178 | None:intergenic | 25.0% |
| ! | GATTAAATATGCAGATACAA+AGG | + | Chr3:82294816-82294835 | MsG0380016348.01.T01:intron | 25.0% |
| ! | TAGAGTATAATCTGTTTCAT+AGG | + | Chr3:82293976-82293995 | MsG0380016348.01.T01:intron | 25.0% |
| ! | TATAGAAAGTTGAAATGGAT+GGG | - | Chr3:82293364-82293383 | None:intergenic | 25.0% |
| ! | TATTCACCAGATTAATATGT+GGG | + | Chr3:82294444-82294463 | MsG0380016348.01.T01:CDS | 25.0% |
| ! | TGAAAATGCATCTTTCATAA+AGG | - | Chr3:82292691-82292710 | None:intergenic | 25.0% |
| ! | TTATAGAAAGTTGAAATGGA+TGG | - | Chr3:82293365-82293384 | None:intergenic | 25.0% |
| ! | TTGATTTAATTGCAGATTCT+TGG | + | Chr3:82295814-82295833 | MsG0380016348.01.T01:intron | 25.0% |
| ! | TTGTAATGTTATTGGAGAAT+GGG | - | Chr3:82293332-82293351 | None:intergenic | 25.0% |
| ! | TTTGTAATGTTATTGGAGAA+TGG | - | Chr3:82293333-82293352 | None:intergenic | 25.0% |
| !! | ATTGAAGACTGATTTAATTG+CGG | + | Chr3:82294345-82294364 | MsG0380016348.01.T01:five_prime_UTR | 25.0% |
| !! | ATTTTGGATGCATGTATATT+TGG | + | Chr3:82296708-82296727 | MsG0380016348.01.T01:three_prime_UTR | 25.0% |
| !! | TCTAATAATATGTGTTTTGC+TGG | + | Chr3:82295204-82295223 | MsG0380016348.01.T01:CDS | 25.0% |
| !!! | AAGAGTGTTTGTAATGTTAT+TGG | - | Chr3:82293340-82293359 | None:intergenic | 25.0% |
| !!! | ATTTTAATTCGAGGAAAACA+AGG | + | Chr3:82293704-82293723 | MsG0380016348.01.T01:intron | 25.0% |
| !!! | CAAAAAAAAGGTTGTTGTTT+TGG | - | Chr3:82293843-82293862 | None:intergenic | 25.0% |
| AAAGTTCCTGCAGTATAAAA+GGG | - | Chr3:82294278-82294297 | None:intergenic | 30.0% | |
| AAGATAGCTATAGCTTCTAA+AGG | + | Chr3:82293609-82293628 | MsG0380016348.01.T01:five_prime_UTR | 30.0% | |
| AAGTTTCTGCAAAATCACAA+TGG | - | Chr3:82294243-82294262 | None:intergenic | 30.0% | |
| AATATGAAACGTGATGAGTA+TGG | + | Chr3:82296545-82296564 | MsG0380016348.01.T01:three_prime_UTR | 30.0% | |
| ACATCCAAAATTTGAAAGCA+TGG | - | Chr3:82294773-82294792 | None:intergenic | 30.0% | |
| AGCTAATAGACCTATTGATA+AGG | + | Chr3:82294697-82294716 | MsG0380016348.01.T01:CDS | 30.0% | |
| AGGAAAACAAGGAAACATAA+CGG | + | Chr3:82293715-82293734 | MsG0380016348.01.T01:intron | 30.0% | |
| AGTGAATGTAATTACATGTG+TGG | - | Chr3:82292838-82292857 | None:intergenic | 30.0% | |
| ATAGAAAGTTGAAATGGATG+GGG | - | Chr3:82293363-82293382 | None:intergenic | 30.0% | |
| ATTCACCAGATTAATATGTG+GGG | + | Chr3:82294445-82294464 | MsG0380016348.01.T01:CDS | 30.0% | |
| CAATCAAAGACAAAAGACAA+AGG | - | Chr3:82293820-82293839 | None:intergenic | 30.0% | |
| CACATATTAATCTGGTGAAT+AGG | - | Chr3:82294445-82294464 | None:intergenic | 30.0% | |
| CATGTTCTAACCTTATCAAT+AGG | - | Chr3:82294710-82294729 | None:intergenic | 30.0% | |
| CCTTACAAGACATCAATAAA+AGG | + | Chr3:82292657-82292676 | MsG0380016348.01.T02:intron | 30.0% | |
| CTATTCACCAGATTAATATG+TGG | + | Chr3:82294443-82294462 | MsG0380016348.01.T01:CDS | 30.0% | |
| GTCTTAATGTGAGAAAGAAT+GGG | + | Chr3:82295696-82295715 | MsG0380016348.01.T01:intron | 30.0% | |
| GTGAATGTAATTACATGTGT+GGG | - | Chr3:82292837-82292856 | None:intergenic | 30.0% | |
| GTTATCCATAGAATGATAGA+AGG | + | Chr3:82295652-82295671 | MsG0380016348.01.T01:intron | 30.0% | |
| TAAAGTTCCTGCAGTATAAA+AGG | - | Chr3:82294279-82294298 | None:intergenic | 30.0% | |
| TAATGGTTATCAAGAAAGCT+AGG | - | Chr3:82296068-82296087 | None:intergenic | 30.0% | |
| TATTGATGTCTTGTAAGGAA+TGG | - | Chr3:82292655-82292674 | None:intergenic | 30.0% | |
| TCAAAACCATATACAATGTG+TGG | + | Chr3:82296590-82296609 | MsG0380016348.01.T01:three_prime_UTR | 30.0% | |
| TCCTTTCTCTGACAAAAAAA+AGG | - | Chr3:82293855-82293874 | None:intergenic | 30.0% | |
| TCTATAGCAAACTGCAATTA+AGG | - | Chr3:82294320-82294339 | None:intergenic | 30.0% | |
| TGTAATGTTATTGGAGAATG+GGG | - | Chr3:82293331-82293350 | None:intergenic | 30.0% | |
| TGTCATGCCATAATTGAATA+TGG | - | Chr3:82295761-82295780 | None:intergenic | 30.0% | |
| TGTCTTAATGTGAGAAAGAA+TGG | + | Chr3:82295695-82295714 | MsG0380016348.01.T01:intron | 30.0% | |
| TTTCTATCACTTTATGTCAC+CGG | + | Chr3:82295102-82295121 | MsG0380016348.01.T01:intron | 30.0% | |
| ! | AAATTAGTCTGTGTGAAAGT+TGG | + | Chr3:82296762-82296781 | MsG0380016348.01.T01:three_prime_UTR | 30.0% |
| ! | AACAGTGTTTCTGATATACA+TGG | + | Chr3:82293140-82293159 | MsG0380016348.01.T02:intron | 30.0% |
| ! | ACTATGAGTCACTATGATTT+TGG | + | Chr3:82294178-82294197 | MsG0380016348.01.T01:intron | 30.0% |
| ! | CCTTTTATTGATGTCTTGTA+AGG | - | Chr3:82292660-82292679 | None:intergenic | 30.0% |
| ! | GAAAGATTTTTCTTGTGGAT+CGG | + | Chr3:82295565-82295584 | MsG0380016348.01.T01:CDS | 30.0% |
| ! | GATACCATGCTTTCAAATTT+TGG | + | Chr3:82294766-82294785 | MsG0380016348.01.T01:intron | 30.0% |
| ! | GTGTCTTTGATTAGAAGTAT+CGG | - | Chr3:82292797-82292816 | None:intergenic | 30.0% |
| ! | GTTTTATAATGCTTAGTCAG+AGG | + | Chr3:82294628-82294647 | MsG0380016348.01.T01:intron | 30.0% |
| !! | ATCAGAGTTAATGTTGATTC+CGG | + | Chr3:82293099-82293118 | MsG0380016348.01.T02:intron | 30.0% |
| !! | ATGAGTATGGTCATTTTCAT+TGG | + | Chr3:82296558-82296577 | MsG0380016348.01.T01:three_prime_UTR | 30.0% |
| !! | CAAAGGTTGATTTGTTTCAT+TGG | + | Chr3:82294561-82294580 | MsG0380016348.01.T01:intron | 30.0% |
| !! | GAAATGTGTATTTTTGTGCT+TGG | - | Chr3:82293298-82293317 | None:intergenic | 30.0% |
| !! | TTAATTGCAGTTTGCTATAG+AGG | + | Chr3:82294319-82294338 | MsG0380016348.01.T01:intron | 30.0% |
| !!! | ACCTTTTTTTTGTCAGAGAA+AGG | + | Chr3:82293851-82293870 | MsG0380016348.01.T01:intron | 30.0% |
| !!! | CAAGCTATTTTTTTCAGAAG+GGG | - | Chr3:82296292-82296311 | None:intergenic | 30.0% |
| !!! | CCAAGCTATTTTTTTCAGAA+GGG | - | Chr3:82296293-82296312 | None:intergenic | 30.0% |
| !!! | GATGTTTTTTATGTGATGTC+CGG | + | Chr3:82295523-82295542 | MsG0380016348.01.T01:CDS | 30.0% |
| !!! | TTAAAACCTTTTTTCGCAGA+CGG | - | Chr3:82294877-82294896 | None:intergenic | 30.0% |
| AAAACTGCAGGGAATGTATA+TGG | + | Chr3:82295167-82295186 | MsG0380016348.01.T01:intron | 35.0% | |
| AAACTGCAGGGAATGTATAT+GGG | + | Chr3:82295168-82295187 | MsG0380016348.01.T01:intron | 35.0% | |
| AACTGTGATTCGTGTTTAAC+AGG | + | Chr3:82296332-82296351 | MsG0380016348.01.T01:intron | 35.0% | |
| AATGATCCATGAATCACATC+AGG | + | Chr3:82292596-82292615 | MsG0380016348.01.T02:intron | 35.0% | |
| ACGACTCTATGATGATAATC+AGG | + | Chr3:82292572-82292591 | MsG0380016348.01.T02:intron | 35.0% | |
| AGGAACTTATATTCCACAGA+TGG | + | Chr3:82295987-82296006 | MsG0380016348.01.T01:CDS | 35.0% | |
| AGTCAGGTAAATGTTTGCAA+AGG | + | Chr3:82294544-82294563 | MsG0380016348.01.T01:intron | 35.0% | |
| AGTTCTTGCATTGCATTCTA+AGG | + | Chr3:82295305-82295324 | MsG0380016348.01.T01:intron | 35.0% | |
| ATCCATTCCCTTAATTGATG+AGG | + | Chr3:82294501-82294520 | MsG0380016348.01.T01:CDS | 35.0% | |
| ATGTGTTGTAACAACAATCC+CGG | - | Chr3:82296259-82296278 | None:intergenic | 35.0% | |
| CCATATACAATGTGTGGTTT+AGG | + | Chr3:82296596-82296615 | MsG0380016348.01.T01:three_prime_UTR | 35.0% | |
| CCTAAACCACACATTGTATA+TGG | - | Chr3:82296599-82296618 | None:intergenic | 35.0% | |
| CTCAAATCTTGTTACCAACA+TGG | - | Chr3:82293578-82293597 | None:intergenic | 35.0% | |
| GTAATTACATGTGTGGGTAT+CGG | - | Chr3:82292831-82292850 | None:intergenic | 35.0% | |
| TAGTATGACATGTTGCGAAA+AGG | - | Chr3:82296117-82296136 | None:intergenic | 35.0% | |
| TCTGTCAATGGTTCAATCAT+TGG | - | Chr3:82295841-82295860 | None:intergenic | 35.0% | |
| TGTGACAATGATTCCATTGT+AGG | - | Chr3:82292625-82292644 | None:intergenic | 35.0% | |
| TTAATGTGAGAAAGAATGGG+AGG | + | Chr3:82295699-82295718 | MsG0380016348.01.T01:intron | 35.0% | |
| TTCCTTTCTCTAATACCTTG+AGG | + | Chr3:82295139-82295158 | MsG0380016348.01.T01:intron | 35.0% | |
| TTCGATAGATTTCAGCATAG+TGG | - | Chr3:82295480-82295499 | None:intergenic | 35.0% | |
| TTGCAGCTTCAACAAAATCA+CGG | + | Chr3:82294214-82294233 | MsG0380016348.01.T01:intron | 35.0% | |
| ! | ATGTTACCCTTTTATACTGC+AGG | + | Chr3:82294269-82294288 | MsG0380016348.01.T01:intron | 35.0% |
| ! | CATACTTGTTAGATGTTCCT+AGG | - | Chr3:82294670-82294689 | None:intergenic | 35.0% |
| ! | CCCTTCTGAAAAAAATAGCT+TGG | + | Chr3:82296290-82296309 | MsG0380016348.01.T01:intron | 35.0% |
| ! | CTTGAAGTTTGATAGTAGTC+AGG | + | Chr3:82294528-82294547 | MsG0380016348.01.T01:CDS | 35.0% |
| ! | GACTGCTCATTTTATGCAAT+AGG | + | Chr3:82296668-82296687 | MsG0380016348.01.T01:three_prime_UTR | 35.0% |
| ! | TACAATTTAGCTTACTCGGT+TGG | - | Chr3:82292515-82292534 | None:intergenic | 35.0% |
| ! | TATGAGTCTCTCTTTGAAGA+TGG | + | Chr3:82293509-82293528 | MsG0380016348.01.T01:five_prime_UTR | 35.0% |
| !! | TGTTGGTAACAAGATTTGAG+CGG | + | Chr3:82293578-82293597 | MsG0380016348.01.T01:five_prime_UTR | 35.0% |
| !! | TTAATGTTGATTCCGGTGAA+GGG | + | Chr3:82293106-82293125 | MsG0380016348.01.T02:intron | 35.0% |
| !!! | GCCAAGCTATTTTTTTCAGA+AGG | - | Chr3:82296294-82296313 | None:intergenic | 35.0% |
| !!! | GTATATGGTTTTGACACTTG+TGG | - | Chr3:82296584-82296603 | None:intergenic | 35.0% |
| !!! | TCATTAGTTCTGCAGTTTTG+TGG | + | Chr3:82293537-82293556 | MsG0380016348.01.T01:five_prime_UTR | 35.0% |
| AAGTCCGCCTCATCAATTAA+GGG | - | Chr3:82294511-82294530 | None:intergenic | 40.0% | |
| AATCGTTGTTGCTCTGTCAA+TGG | - | Chr3:82295853-82295872 | None:intergenic | 40.0% | |
| AGAAAGCTAGGTACAATACC+TGG | - | Chr3:82296056-82296075 | None:intergenic | 40.0% | |
| AGAATATTTCCAACGCCTGA+GGG | + | Chr3:82296440-82296459 | MsG0380016348.01.T01:CDS | 40.0% | |
| AGGAAAAAGAAAGACGATGC+CGG | - | Chr3:82295124-82295143 | None:intergenic | 40.0% | |
| AGGAATCCTGATGTGATTCA+TGG | - | Chr3:82292605-82292624 | None:intergenic | 40.0% | |
| ATGTCCATACTCCATCTCAA+AGG | - | Chr3:82295356-82295375 | None:intergenic | 40.0% | |
| ATTGACAGAGCAACAACGAT+TGG | + | Chr3:82295852-82295871 | MsG0380016348.01.T01:CDS | 40.0% | |
| ATTGGTCATCATCACCATGT+TGG | + | Chr3:82293561-82293580 | MsG0380016348.01.T01:five_prime_UTR | 40.0% | |
| CAGATTAATATGTGGGGAGA+AGG | + | Chr3:82294451-82294470 | MsG0380016348.01.T01:CDS | 40.0% | |
| CATGATTTGATCACGGAGTT+CGG | - | Chr3:82296194-82296213 | None:intergenic | 40.0% | |
| CATTCCCTTAATTGATGAGG+CGG | + | Chr3:82294504-82294523 | MsG0380016348.01.T01:CDS | 40.0% | |
| CATTTCTGACATTGCCATAC+AGG | + | Chr3:82294961-82294980 | MsG0380016348.01.T01:intron | 40.0% | |
| CGATTGGATATCGATAACCT+TGG | + | Chr3:82295868-82295887 | MsG0380016348.01.T01:CDS | 40.0% | |
| CTTCTCCCCACATATTAATC+TGG | - | Chr3:82294453-82294472 | None:intergenic | 40.0% | |
| CTTGTTGACATGATTGTCCA+AGG | - | Chr3:82295888-82295907 | None:intergenic | 40.0% | |
| GATGTCTTGTAAGGAATGGT+TGG | - | Chr3:82292651-82292670 | None:intergenic | 40.0% | |
| GCACATTAGTGGTTAGATAG+TGG | + | Chr3:82293166-82293185 | MsG0380016348.01.T02:intron | 40.0% | |
| GGAGAAGGCTTCAAAAGTAA+TGG | + | Chr3:82294466-82294485 | MsG0380016348.01.T01:CDS | 40.0% | |
| GTATTAGTGACATAGAGCTC+AGG | + | Chr3:82295431-82295450 | MsG0380016348.01.T01:CDS | 40.0% | |
| GTGCTACAAAGATTGCTACT+CGG | - | Chr3:82292775-82292794 | None:intergenic | 40.0% | |
| GTGGAAACATGACAATGACT+AGG | + | Chr3:82293185-82293204 | MsG0380016348.01.T02:intron | 40.0% | |
| TCACATCAGGATTCCTACAA+TGG | + | Chr3:82292609-82292628 | MsG0380016348.01.T02:intron | 40.0% | |
| TCTCGCCTTCTATCATTCTA+TGG | - | Chr3:82295660-82295679 | None:intergenic | 40.0% | |
| TGAGATGGAGTATGGACATT+GGG | + | Chr3:82295357-82295376 | MsG0380016348.01.T01:CDS | 40.0% | |
| TTCTCATTTCCGAGATTTGC+CGG | - | Chr3:82295396-82295415 | None:intergenic | 40.0% | |
| TTGAGATGGAGTATGGACAT+TGG | + | Chr3:82295356-82295375 | MsG0380016348.01.T01:CDS | 40.0% | |
| TTGAGGCAACAAAAACTGCA+GGG | + | Chr3:82295156-82295175 | MsG0380016348.01.T01:intron | 40.0% | |
| TTTAACAGGCTGACCATCTT+CGG | + | Chr3:82296346-82296365 | MsG0380016348.01.T01:intron | 40.0% | |
| TTTCTCCATGCCTTGTGAAA+GGG | - | Chr3:82295920-82295939 | None:intergenic | 40.0% | |
| ! | AAAGATTGCTACTCGGTGAT+AGG | - | Chr3:82292768-82292787 | None:intergenic | 40.0% |
| ! | AGATTTTTCTTGTGGATCGG+TGG | + | Chr3:82295568-82295587 | MsG0380016348.01.T01:CDS | 40.0% |
| ! | CGGCTGAAAGATTTTTCTTG+TGG | + | Chr3:82295560-82295579 | MsG0380016348.01.T01:CDS | 40.0% |
| ! | TCGTTTGAAGTTAGTGCAGT+TGG | + | Chr3:82295009-82295028 | MsG0380016348.01.T01:CDS | 40.0% |
| ! | TGCCTCAAGGTATTAGAGAA+AGG | - | Chr3:82295144-82295163 | None:intergenic | 40.0% |
| ! | TTGTTCGAGTAGAACTTGCT+CGG | - | Chr3:82292964-82292983 | None:intergenic | 40.0% |
| ! | TTTCATCATGAGGGTTGATC+TGG | - | Chr3:82292550-82292569 | None:intergenic | 40.0% |
| ! | TTTCCTGCAGTCTTTTGTTG+TGG | + | Chr3:82296630-82296649 | MsG0380016348.01.T01:three_prime_UTR | 40.0% |
| !! | ATTGGGTTGATGAGCAAAAC+CGG | + | Chr3:82295374-82295393 | MsG0380016348.01.T01:CDS | 40.0% |
| !! | GTTAATGTTGATTCCGGTGA+AGG | + | Chr3:82293105-82293124 | MsG0380016348.01.T02:intron | 40.0% |
| !! | GTTCTGCAGTTTTGTGGTAT+TGG | + | Chr3:82293543-82293562 | MsG0380016348.01.T01:five_prime_UTR | 40.0% |
| !! | GTTGGTAACAAGATTTGAGC+GGG | + | Chr3:82293579-82293598 | MsG0380016348.01.T01:five_prime_UTR | 40.0% |
| ACAAACCAACCTGGATTCAC+AGG | - | Chr3:82295231-82295250 | None:intergenic | 45.0% | |
| AGAGTCGTGCTTTCATCATG+AGG | - | Chr3:82292560-82292579 | None:intergenic | 45.0% | |
| AGCATCTTCACAAACCAACC+TGG | - | Chr3:82295240-82295259 | None:intergenic | 45.0% | |
| AGCTCGATGTTTGCTTGCTT+TGG | + | Chr3:82296416-82296435 | MsG0380016348.01.T01:CDS | 45.0% | |
| AGGGAATGTATATGGGTGGT+GGG | + | Chr3:82295175-82295194 | MsG0380016348.01.T01:intron | 45.0% | |
| ATACACACTCATCCTTCTCG+AGG | - | Chr3:82294419-82294438 | None:intergenic | 45.0% | |
| ATACATGGTGCGCACATTAG+TGG | + | Chr3:82293155-82293174 | MsG0380016348.01.T02:intron | 45.0% | |
| ATCACCTTGAGAAGCTCAGA+AGG | - | Chr3:82295601-82295620 | None:intergenic | 45.0% | |
| CAAGTCCGCCTCATCAATTA+AGG | - | Chr3:82294512-82294531 | None:intergenic | 45.0% | |
| CCAATCTCACAGTCTATCCA+AGG | - | Chr3:82294151-82294170 | None:intergenic | 45.0% | |
| CCTTGGATAGACTGTGAGAT+TGG | + | Chr3:82294148-82294167 | MsG0380016348.01.T01:intron | 45.0% | |
| CGCCTCATCAATTAAGGGAA+TGG | - | Chr3:82294506-82294525 | None:intergenic | 45.0% | |
| CTCAAAGGCTGCAATTCCTA+CGG | - | Chr3:82295341-82295360 | None:intergenic | 45.0% | |
| CTCACAGTCTATCCAAGGAA+GGG | - | Chr3:82294146-82294165 | None:intergenic | 45.0% | |
| CTTGAGGCAACAAAAACTGC+AGG | + | Chr3:82295155-82295174 | MsG0380016348.01.T01:intron | 45.0% | |
| GAGAATATTTCCAACGCCTG+AGG | + | Chr3:82296439-82296458 | MsG0380016348.01.T01:CDS | 45.0% | |
| GAGTCGTGCTTTCATCATGA+GGG | - | Chr3:82292559-82292578 | None:intergenic | 45.0% | |
| GATGCTTCTCATGGTATCCT+AGG | + | Chr3:82294650-82294669 | MsG0380016348.01.T01:CDS | 45.0% | |
| GCAGCTGGACAATTCATTGA+AGG | + | Chr3:82295967-82295986 | MsG0380016348.01.T01:CDS | 45.0% | |
| GCTCGATGTTTGCTTGCTTT+GGG | + | Chr3:82296417-82296436 | MsG0380016348.01.T01:CDS | 45.0% | |
| GCTGCAATTCCTACGGATAA+GGG | - | Chr3:82295334-82295353 | None:intergenic | 45.0% | |
| GTGGACTTGAAGACGATAGT+TGG | - | Chr3:82292939-82292958 | None:intergenic | 45.0% | |
| GTTTCTCCATGCCTTGTGAA+AGG | - | Chr3:82295921-82295940 | None:intergenic | 45.0% | |
| TAAGAGCCGTCTGCGAAAAA+AGG | + | Chr3:82294868-82294887 | MsG0380016348.01.T01:CDS | 45.0% | |
| TAGTCAGAGGATGCTTCTCA+TGG | + | Chr3:82294641-82294660 | MsG0380016348.01.T01:intron | 45.0% | |
| TCACCTTGAGAAGCTCAGAA+GGG | - | Chr3:82295600-82295619 | None:intergenic | 45.0% | |
| TCTCACAGTCTATCCAAGGA+AGG | - | Chr3:82294147-82294166 | None:intergenic | 45.0% | |
| TCTCCACAACAAAAGACTGC+AGG | - | Chr3:82296636-82296655 | None:intergenic | 45.0% | |
| TCTCGAGGAAACAAACTGTG+CGG | - | Chr3:82294404-82294423 | None:intergenic | 45.0% | |
| TGAGCAAAACCGGCAAATCT+CGG | + | Chr3:82295384-82295403 | MsG0380016348.01.T01:CDS | 45.0% | |
| TGTTATTGGAGAATGGGGAG+TGG | - | Chr3:82293326-82293345 | None:intergenic | 45.0% | |
| TTCACTATTCCACCCTTCAC+CGG | - | Chr3:82293121-82293140 | None:intergenic | 45.0% | |
| TTGAATAAGTGGCCCTTCCT+TGG | + | Chr3:82294131-82294150 | MsG0380016348.01.T01:intron | 45.0% | |
| TTTATGTGATGTCCGGCATG+TGG | + | Chr3:82295530-82295549 | MsG0380016348.01.T01:CDS | 45.0% | |
| ! | AGACTGATTTAATTGCGGCG+CGG | + | Chr3:82294350-82294369 | MsG0380016348.01.T01:five_prime_UTR | 45.0% |
| ! | AGGAATTGCAGCCTTTGAGA+TGG | + | Chr3:82295342-82295361 | MsG0380016348.01.T01:intron | 45.0% |
| ! | CACAGTTTGTTTCCTCGAGA+AGG | + | Chr3:82294404-82294423 | MsG0380016348.01.T01:CDS | 45.0% |
| ! | CTGCAGTTTTTGTTGCCTCA+AGG | - | Chr3:82295157-82295176 | None:intergenic | 45.0% |
| ! | TCTTGTGAGCTTTGTGAACC+AGG | + | Chr3:82296035-82296054 | MsG0380016348.01.T01:CDS | 45.0% |
| ! | TGTTCGAGTAGAACTTGCTC+GGG | - | Chr3:82292963-82292982 | None:intergenic | 45.0% |
| ! | TGTTCGCGACATTTGTTGCA+AGG | - | Chr3:82296379-82296398 | None:intergenic | 45.0% |
| !! | AATGTATATGGGTGGTGGGT+TGG | + | Chr3:82295179-82295198 | MsG0380016348.01.T01:CDS | 45.0% |
| AACGTGTTAGACAGCAGGTG+TGG | + | Chr3:82295044-82295063 | MsG0380016348.01.T01:intron | 50.0% | |
| ACGTGTTAGACAGCAGGTGT+GGG | + | Chr3:82295045-82295064 | MsG0380016348.01.T01:intron | 50.0% | |
| AGATGCCCTTTCACAAGGCA+TGG | + | Chr3:82295912-82295931 | MsG0380016348.01.T01:CDS | 50.0% | |
| ATAGTGAGCTCAAAGCCCTC+AGG | - | Chr3:82296458-82296477 | None:intergenic | 50.0% | |
| CACAAGGCATGGAGAAACTG+CGG | + | Chr3:82295923-82295942 | MsG0380016348.01.T01:CDS | 50.0% | |
| CAGGGAATGTATATGGGTGG+TGG | + | Chr3:82295174-82295193 | MsG0380016348.01.T01:intron | 50.0% | |
| CTAAGGACACCCTTATCCGT+AGG | + | Chr3:82295322-82295341 | MsG0380016348.01.T01:intron | 50.0% | |
| CTGCAGGGAATGTATATGGG+TGG | + | Chr3:82295171-82295190 | MsG0380016348.01.T01:intron | 50.0% | |
| CTGCTGCACATAAGCCTGTA+TGG | - | Chr3:82294978-82294997 | None:intergenic | 50.0% | |
| GACGGCGAATTCATGCTCAA+TGG | - | Chr3:82294382-82294401 | None:intergenic | 50.0% | |
| GAGGAAACAAACTGTGCGGA+CGG | - | Chr3:82294400-82294419 | None:intergenic | 50.0% | |
| GCAAACATCGAGCTGACTGA+CGG | - | Chr3:82296410-82296429 | None:intergenic | 50.0% | |
| GCAGAAGATGCCCTTTCACA+AGG | + | Chr3:82295907-82295926 | MsG0380016348.01.T01:CDS | 50.0% | |
| GGCTGCAATTCCTACGGATA+AGG | - | Chr3:82295335-82295354 | None:intergenic | 50.0% | |
| GTCCGGCATGTGGAAAACAA+CGG | + | Chr3:82295540-82295559 | MsG0380016348.01.T01:CDS | 50.0% | |
| TATTGGAGAATGGGGAGTGG+TGG | - | Chr3:82293323-82293342 | None:intergenic | 50.0% | |
| TCCACAGATGGCTACTGCAA+TGG | + | Chr3:82295999-82296018 | MsG0380016348.01.T01:CDS | 50.0% | |
| TCCATTGCAGTAGCCATCTG+TGG | - | Chr3:82296003-82296022 | None:intergenic | 50.0% | |
| TGACATAGAGCTCAGGATGC+TGG | + | Chr3:82295438-82295457 | MsG0380016348.01.T01:CDS | 50.0% | |
| TTTGCTGGACCTGTGAATCC+AGG | + | Chr3:82295219-82295238 | MsG0380016348.01.T01:CDS | 50.0% | |
| !! | AGCCGTTGTTTTCCACATGC+CGG | - | Chr3:82295545-82295564 | None:intergenic | 50.0% |
| !! | ATGTTGATTCCGGTGAAGGG+TGG | + | Chr3:82293109-82293128 | MsG0380016348.01.T02:intron | 50.0% |
| !! | GCAGCCTTTGAGATGGAGTA+TGG | + | Chr3:82295349-82295368 | MsG0380016348.01.T01:CDS | 50.0% |
| !! | TGAGGGCTTTGAGCTCACTA+TGG | + | Chr3:82296457-82296476 | MsG0380016348.01.T01:CDS | 50.0% |
| CGTGTTAGACAGCAGGTGTG+GGG | + | Chr3:82295046-82295065 | MsG0380016348.01.T01:intron | 55.0% | |
| CTGGACCTGTGAATCCAGGT+TGG | + | Chr3:82295223-82295242 | MsG0380016348.01.T01:intron | 55.0% | |
| GCAAGGTTTCCTGCCGAAGA+TGG | - | Chr3:82296362-82296381 | None:intergenic | 55.0% | |
| GCTCGAACGTGTTAGACAGC+AGG | + | Chr3:82295039-82295058 | MsG0380016348.01.T01:CDS | 55.0% | |
| TCGCCCTTCTGAGCTTCTCA+AGG | + | Chr3:82295594-82295613 | MsG0380016348.01.T01:CDS | 55.0% | |
| ! | GAGCTCAGGATGCTGGTTGA+TGG | + | Chr3:82295445-82295464 | MsG0380016348.01.T01:CDS | 55.0% |
| ! | GAGTAGAACTTGCTCGGGAG+TGG | - | Chr3:82292958-82292977 | None:intergenic | 55.0% |
| !! | GTGTGGGTATCGGACACTCT+GGG | - | Chr3:82292821-82292840 | None:intergenic | 55.0% |
| !! | TGTGTGGGTATCGGACACTC+TGG | - | Chr3:82292822-82292841 | None:intergenic | 55.0% |
| ACAGGCTGACCATCTTCGGC+AGG | + | Chr3:82296350-82296369 | MsG0380016348.01.T01:intron | 60.0% | |
| AGCTCAAAGCCCTCAGGCGT+TGG | - | Chr3:82296452-82296471 | None:intergenic | 60.0% | |
| ! | CTCGCTGATAGCGTAGCAGC+TGG | + | Chr3:82295952-82295971 | MsG0380016348.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 82292503 | 82296824 | 82292503 | ID=MsG0380016348.01;Name=MsG0380016348.01 |
| Chr3 | mRNA | 82293217 | 82296824 | 82293217 | ID=MsG0380016348.01.T01;Parent=MsG0380016348.01;Name=MsG0380016348.01.T01;_AED=0.31;_eAED=0.31;_QI=473|1|1|1|0.62|0.66|9|318|363 |
| Chr3 | exon | 82293217 | 82293630 | 82293217 | ID=MsG0380016348.01.T01:exon:11654;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82294329 | 82294549 | 82294329 | ID=MsG0380016348.01.T01:exon:11655;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82294983 | 82295060 | 82294983 | ID=MsG0380016348.01.T01:exon:11658;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82295177 | 82295240 | 82295177 | ID=MsG0380016348.01.T01:exon:11659;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82295344 | 82295615 | 82295344 | ID=MsG0380016348.01.T01:exon:11660;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82295829 | 82296056 | 82295829 | ID=MsG0380016348.01.T01:exon:11661;Parent=MsG0380016348.01.T01 |
| Chr3 | exon | 82296354 | 82296824 | 82296354 | ID=MsG0380016348.01.T01:exon:11662;Parent=MsG0380016348.01.T01 |
| Chr3 | five_prime_UTR | 82293217 | 82293630 | 82293217 | ID=MsG0380016348.01.T01:five_prime_utr;Parent=MsG0380016348.01.T01 |
| Chr3 | five_prime_UTR | 82294329 | 82294387 | 82294329 | ID=MsG0380016348.01.T01:five_prime_utr;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82294388 | 82294549 | 82294388 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82294644 | 82294718 | 82294644 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82294830 | 82294889 | 82294830 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82294983 | 82295060 | 82294983 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82295177 | 82295240 | 82295177 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82295344 | 82295615 | 82295344 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82295829 | 82296056 | 82295829 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | CDS | 82296354 | 82296506 | 82296354 | ID=MsG0380016348.01.T01:cds;Parent=MsG0380016348.01.T01 |
| Chr3 | three_prime_UTR | 82296507 | 82296824 | 82296507 | ID=MsG0380016348.01.T01:three_prime_utr;Parent=MsG0380016348.01.T01 |
| Chr3 | mRNA | 82292503 | 82295075 | 82292503 | ID=MsG0380016348.01.T02;Parent=MsG0380016348.01;Name=MsG0380016348.01.T02;_AED=0.47;_eAED=0.52;_QI=0|0.75|0.4|0.8|0.75|0.6|5|0|167 |
| Chr3 | exon | 82292503 | 82292519 | 82292503 | ID=MsG0380016348.01.T02:exon:11663;Parent=MsG0380016348.01.T02 |
| Chr3 | exon | 82294291 | 82294549 | 82294291 | ID=MsG0380016348.01.T02:exon:11664;Parent=MsG0380016348.01.T02 |
| Chr3 | exon | 82294983 | 82295075 | 82294983 | ID=MsG0380016348.01.T02:exon:11665;Parent=MsG0380016348.01.T02 |
| Chr3 | CDS | 82292503 | 82292519 | 82292503 | ID=MsG0380016348.01.T02:cds;Parent=MsG0380016348.01.T02 |
| Chr3 | CDS | 82294291 | 82294549 | 82294291 | ID=MsG0380016348.01.T02:cds;Parent=MsG0380016348.01.T02 |
| Chr3 | CDS | 82294644 | 82294718 | 82294644 | ID=MsG0380016348.01.T02:cds;Parent=MsG0380016348.01.T02 |
| Chr3 | CDS | 82294830 | 82294889 | 82294830 | ID=MsG0380016348.01.T02:cds;Parent=MsG0380016348.01.T02 |
| Chr3 | CDS | 82294983 | 82295075 | 82294983 | ID=MsG0380016348.01.T02:cds;Parent=MsG0380016348.01.T02 |
| Gene Sequence |
| Protein sequence |
