Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047113.01.T01 | XP_003609735.1 | 93.352 | 361 | 24 | 0 | 1 | 361 | 16 | 376 | 0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047113.01.T01 | A0A1C9CX66 | 41.828 | 361 | 199 | 7 | 1 | 357 | 37 | 390 | 3.99E-90 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047113.01.T01 | G7JMR7 | 93.352 | 361 | 24 | 0 | 1 | 361 | 16 | 376 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001029.01 | MsG0880047113.01 | 0.811291 | 7.535343e-51 | 4.646146e-48 |
| MsG0880045801.01 | MsG0880047113.01 | 0.804688 | 1.916009e-49 | 9.943026e-47 |
| MsG0780040497.01 | MsG0880047113.01 | 0.821177 | 4.637145e-53 | 3.745512e-50 |
| MsG0680031139.01 | MsG0880047113.01 | 0.817930 | 2.553967e-52 | 1.885232e-49 |
| MsG0580024138.01 | MsG0880047113.01 | 0.803581 | 3.256237e-49 | 1.642459e-46 |
| MsG0580024217.01 | MsG0880047113.01 | 0.805805 | 1.118187e-49 | 5.971875e-47 |
| MsG0580025965.01 | MsG0880047113.01 | 0.806966 | 6.362019e-50 | 3.500314e-47 |
| MsG0380016299.01 | MsG0880047113.01 | 0.802810 | 4.702238e-49 | 2.325461e-46 |
| MsG0380017168.01 | MsG0880047113.01 | 0.802078 | 6.654463e-49 | 3.229899e-46 |
| MsG0580027753.01 | MsG0880047113.01 | 0.808428 | 3.111704e-50 | 1.778800e-47 |
| MsG0280010515.01 | MsG0880047113.01 | 0.804175 | 2.451091e-49 | 1.255250e-46 |
| MsG0780036649.01 | MsG0880047113.01 | 0.804553 | 2.044485e-49 | 1.057241e-46 |
| MsG0780036839.01 | MsG0880047113.01 | 0.813174 | 2.925297e-51 | 1.896521e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047113.01.T01 | MTR_4g121570 | 93.352 | 361 | 24 | 0 | 1 | 361 | 16 | 376 | 0.0 | 706 |
| MsG0880047113.01.T01 | MTR_4g073090 | 83.102 | 361 | 61 | 0 | 1 | 361 | 16 | 376 | 0.0 | 645 |
| MsG0880047113.01.T01 | MTR_4g121590 | 81.163 | 361 | 68 | 0 | 1 | 361 | 16 | 376 | 0.0 | 625 |
| MsG0880047113.01.T01 | MTR_3g102730 | 41.304 | 368 | 191 | 8 | 1 | 357 | 37 | 390 | 1.27e-91 | 280 |
| MsG0880047113.01.T01 | MTR_3g102760 | 41.274 | 361 | 201 | 8 | 1 | 357 | 37 | 390 | 2.50e-90 | 276 |
| MsG0880047113.01.T01 | MTR_3g013890 | 40.761 | 368 | 193 | 8 | 1 | 357 | 37 | 390 | 2.66e-90 | 276 |
| MsG0880047113.01.T01 | MTR_3g102770 | 41.873 | 363 | 195 | 8 | 1 | 357 | 37 | 389 | 3.11e-90 | 276 |
| MsG0880047113.01.T01 | MTR_1g018590 | 40.278 | 360 | 205 | 7 | 1 | 357 | 42 | 394 | 7.29e-87 | 268 |
| MsG0880047113.01.T01 | MTR_1g018610 | 40.000 | 360 | 206 | 7 | 1 | 357 | 71 | 423 | 5.49e-85 | 264 |
| MsG0880047113.01.T01 | MTR_1g018580 | 38.056 | 360 | 189 | 7 | 1 | 357 | 36 | 364 | 5.80e-77 | 241 |
| MsG0880047113.01.T01 | MTR_3g463660 | 35.870 | 368 | 214 | 12 | 1 | 357 | 19 | 375 | 5.52e-59 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047113.01.T01 | AT4G24220 | 41.436 | 362 | 197 | 7 | 1 | 357 | 36 | 387 | 3.49e-90 | 276 |
| MsG0880047113.01.T01 | AT4G24220 | 41.436 | 362 | 197 | 7 | 1 | 357 | 37 | 388 | 3.55e-90 | 276 |
| MsG0880047113.01.T01 | AT5G58750 | 30.874 | 366 | 240 | 9 | 1 | 357 | 16 | 377 | 1.13e-51 | 176 |
| MsG0880047113.01.T01 | AT5G58750 | 30.874 | 366 | 240 | 9 | 1 | 357 | 24 | 385 | 1.57e-51 | 176 |
Find 100 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGAAGTCACCCACCTCTTC+TGG | 0.205721 | 8:-82125503 | MsG0880047113.01.T01:CDS |
| TTCCGGTTTGGACCGTTATA+TGG | 0.216248 | 8:+82125373 | None:intergenic |
| GAGAAGATAGGGAAGATTTA+AGG | 0.255722 | 8:+82125403 | None:intergenic |
| ATGAATAAGAGTAAAGATTA+TGG | 0.264309 | 8:-82124715 | MsG0880047113.01.T01:CDS |
| CATCGATCCTCTCTCATAAT+AGG | 0.305949 | 8:-82125186 | MsG0880047113.01.T01:CDS |
| CGAGGCATATTCTCGTTAAA+AGG | 0.353149 | 8:+82125285 | None:intergenic |
| TCCCAAGTGTATCTATTTCC+TGG | 0.357073 | 8:+82125075 | None:intergenic |
| GACTTGATTGTAGAGAAATA+TGG | 0.385064 | 8:-82124823 | MsG0880047113.01.T01:CDS |
| CTTCTTCATCAGCTACAAAC+TGG | 0.386111 | 8:+82125472 | None:intergenic |
| TGAATAAGAGTAAAGATTAT+GGG | 0.394383 | 8:-82124714 | MsG0880047113.01.T01:CDS |
| ACCCATGTAATGTTTAGTTC+CGG | 0.399374 | 8:+82125356 | None:intergenic |
| GCGTGACAAGGGTGAGGTTT+GGG | 0.400025 | 8:-82124845 | MsG0880047113.01.T01:CDS |
| TCCGGTTTGGACCGTTATAT+GGG | 0.403019 | 8:+82125374 | None:intergenic |
| GAGGAGCATGGATTTGTTAA+CGG | 0.404458 | 8:+82125440 | None:intergenic |
| GTTGGCTATAGGTAATAGTT+TGG | 0.406552 | 8:+82125524 | None:intergenic |
| GCCATGTAGGGTTACCGTTT+CGG | 0.412038 | 8:-82125101 | MsG0880047113.01.T01:CDS |
| ATGGGCGAGAGGAGAAGATA+GGG | 0.414145 | 8:+82125392 | None:intergenic |
| TGTAATGTTTAGTTCCGGTT+TGG | 0.414990 | 8:+82125361 | None:intergenic |
| TATGGGCGAGAGGAGAAGAT+AGG | 0.417343 | 8:+82125391 | None:intergenic |
| CGAAGTCACCCACCTCTTCT+GGG | 0.426334 | 8:-82125502 | MsG0880047113.01.T01:CDS |
| GGTAATGAAGCCGTCTAAGA+TGG | 0.426533 | 8:+82125578 | None:intergenic |
| AGCAGGTTGCTTCAAGGCTT+CGG | 0.430339 | 8:+82125668 | None:intergenic |
| AATTAATTAGTGTTGGTAGC+AGG | 0.432055 | 8:+82124618 | None:intergenic |
| TGATGTTGAGTTTGTTGAGT+TGG | 0.436865 | 8:-82124902 | MsG0880047113.01.T01:CDS |
| CGTTTGTACAATTAAATGCT+TGG | 0.439544 | 8:+82124974 | None:intergenic |
| CTGCCATATGTCGCCATGTA+GGG | 0.443099 | 8:-82125113 | MsG0880047113.01.T01:CDS |
| GTCGGAGTTACGGGAATGGT+TGG | 0.453006 | 8:-82125702 | None:intergenic |
| TGAAACTCAAACCGTACAAC+TGG | 0.454291 | 8:+82124751 | None:intergenic |
| GCCCATATAACGGTCCAAAC+CGG | 0.457826 | 8:-82125375 | MsG0880047113.01.T01:CDS |
| AACCGGAACTAAACATTACA+TGG | 0.459743 | 8:-82125358 | MsG0880047113.01.T01:CDS |
| GAGACAAGCAGGTTGCTTCA+AGG | 0.466420 | 8:+82125662 | None:intergenic |
| TGCGTGACAAGGGTGAGGTT+TGG | 0.467326 | 8:-82124846 | MsG0880047113.01.T01:CDS |
| GACCGGACCGGGTCATATAT+CGG | 0.467396 | 8:+82125333 | None:intergenic |
| CAAGCATTTAATTGTACAAA+CGG | 0.475328 | 8:-82124973 | MsG0880047113.01.T01:CDS |
| TTCCCTTCTTCCATCTTAGA+CGG | 0.478293 | 8:-82125588 | MsG0880047113.01.T01:CDS |
| GCAAGCAATTTCCGCCAACT+TGG | 0.481071 | 8:+82124789 | None:intergenic |
| GCACAACCGTAGACTTTCCA+TGG | 0.481399 | 8:+82125633 | None:intergenic |
| TCGGAGTTACGGGAATGGTT+GGG | 0.485596 | 8:-82125701 | None:intergenic |
| TAACCCTACATGGCGACATA+TGG | 0.494040 | 8:+82125110 | None:intergenic |
| GTGGTTCGTGACATATAAGT+TGG | 0.499435 | 8:+82125307 | None:intergenic |
| CCCAAGTGTATCTATTTCCT+GGG | 0.500577 | 8:+82125076 | None:intergenic |
| ATTAATTAGTGTTGGTAGCA+GGG | 0.506480 | 8:+82124619 | None:intergenic |
| GTTTAAGAGTATCAAACGTT+GGG | 0.508284 | 8:-82124671 | MsG0880047113.01.T01:CDS |
| CATGGGCCTCCGAGACAAGC+AGG | 0.510193 | 8:+82125651 | None:intergenic |
| AAGCCATGGTGCCAGTTGTA+CGG | 0.510935 | 8:-82124762 | MsG0880047113.01.T01:CDS |
| AGCTGAGTCAACTGCGTCAA+AGG | 0.511856 | 8:+82125557 | None:intergenic |
| AAGCCGTCTAAGATGGAAGA+AGG | 0.513241 | 8:+82125585 | None:intergenic |
| TTCTCCTCTCGCCCATATAA+CGG | 0.514470 | 8:-82125385 | MsG0880047113.01.T01:CDS |
| AATTGCTTGCTTTGAAGCCA+TGG | 0.522227 | 8:-82124776 | MsG0880047113.01.T01:CDS |
| CTGCTTGTCTCGGAGGCCCA+TGG | 0.526168 | 8:-82125650 | MsG0880047113.01.T01:CDS |
| CTATTTCCTGGGTACCGAAA+CGG | 0.528475 | 8:+82125087 | None:intergenic |
| GAAGAAGGGAACCAGCCCAT+GGG | 0.542654 | 8:+82125600 | None:intergenic |
| GGAAGAAGGGAACCAGCCCA+TGG | 0.542761 | 8:+82125599 | None:intergenic |
| GACATATAAGTTGGTTAGAC+CGG | 0.544206 | 8:+82125316 | None:intergenic |
| TGTATTGAGTATGTAATTGA+AGG | 0.546327 | 8:+82125207 | None:intergenic |
| ATAATGCAATTAATTAGTGT+TGG | 0.546868 | 8:+82124611 | None:intergenic |
| CGTTTAAGAGTATCAAACGT+TGG | 0.546920 | 8:-82124672 | MsG0880047113.01.T01:CDS |
| TTGAAGCAACCTGCTTGTCT+CGG | 0.547022 | 8:-82125660 | MsG0880047113.01.T01:CDS |
| GTTGCTTCAAGGCTTCGGCT+AGG | 0.549092 | 8:+82125673 | None:intergenic |
| TGGGTGACTTCGTTGGCTAT+AGG | 0.552087 | 8:+82125513 | None:intergenic |
| ACCGAAACGGTAACCCTACA+TGG | 0.555455 | 8:+82125100 | None:intergenic |
| AGATAGGGAAGATTTAAGGA+CGG | 0.558772 | 8:+82125407 | None:intergenic |
| ATAAGTTGGTTAGACCGGAC+CGG | 0.564907 | 8:+82125321 | None:intergenic |
| AACGTTGGGTGGCTAAGCTG+AGG | 0.568432 | 8:-82124657 | MsG0880047113.01.T01:CDS |
| TAAGTTGGTTAGACCGGACC+GGG | 0.568935 | 8:+82125322 | None:intergenic |
| GTCCGATATATGACCCGGTC+CGG | 0.572844 | 8:-82125335 | MsG0880047113.01.T01:CDS |
| CATGGGTCCGATATATGACC+CGG | 0.576515 | 8:-82125340 | MsG0880047113.01.T01:CDS |
| GGGTTACCGTTTCGGTACCC+AGG | 0.577350 | 8:-82125093 | MsG0880047113.01.T01:CDS |
| TATGTCAGATGCAGATGTGC+TGG | 0.581656 | 8:-82125040 | MsG0880047113.01.T01:CDS |
| ACCCAGGAAATAGATACACT+TGG | 0.581714 | 8:-82125077 | MsG0880047113.01.T01:CDS |
| GGAGGCCCATGGAAAGTCTA+CGG | 0.586449 | 8:-82125639 | MsG0880047113.01.T01:CDS |
| GGAACGTCACCCAGAAGAGG+TGG | 0.588892 | 8:+82125493 | None:intergenic |
| TAAGAGTATCAAACGTTGGG+TGG | 0.589772 | 8:-82124668 | MsG0880047113.01.T01:CDS |
| TAAGGACGGTGACAACATTG+AGG | 0.597328 | 8:+82125421 | None:intergenic |
| GAAGAGGTGGGTGACTTCGT+TGG | 0.599842 | 8:+82125506 | None:intergenic |
| GTTGATGCGTGACAAGGGTG+AGG | 0.600978 | 8:-82124851 | MsG0880047113.01.T01:CDS |
| AAGCAACCTGCTTGTCTCGG+AGG | 0.615645 | 8:-82125657 | MsG0880047113.01.T01:CDS |
| CGTTGAGTTGATGCGTGACA+AGG | 0.616253 | 8:-82124857 | MsG0880047113.01.T01:CDS |
| GGCATATTCTCGTTAAAAGG+TGG | 0.617142 | 8:+82125288 | None:intergenic |
| GGTGACAACATTGAGGAGCA+TGG | 0.617592 | 8:+82125428 | None:intergenic |
| AAGAAGGGAACCAGCCCATG+GGG | 0.620178 | 8:+82125601 | None:intergenic |
| ACGTTGGGTGGCTAAGCTGA+GGG | 0.622480 | 8:-82124656 | MsG0880047113.01.T01:CDS |
| ACTTCATAAGACCAAGTTGG+CGG | 0.628706 | 8:-82124800 | MsG0880047113.01.T01:CDS |
| TGGACTTCATAAGACCAAGT+TGG | 0.630635 | 8:-82124803 | MsG0880047113.01.T01:CDS |
| CCCAGGAAATAGATACACTT+GGG | 0.634173 | 8:-82125076 | MsG0880047113.01.T01:CDS |
| ACTGGAACGTCACCCAGAAG+AGG | 0.637414 | 8:+82125490 | None:intergenic |
| GCTGCCATATGTCGCCATGT+AGG | 0.637754 | 8:-82125114 | MsG0880047113.01.T01:CDS |
| AAACCGTACAACTGGCACCA+TGG | 0.641744 | 8:+82124759 | None:intergenic |
| TGGACCGTTATATGGGCGAG+AGG | 0.642068 | 8:+82125381 | None:intergenic |
| AAAGCAACATGTGTGGGCTG+CGG | 0.643605 | 8:-82125016 | MsG0880047113.01.T01:CDS |
| AGACGCACCTATTATGAGAG+AGG | 0.645667 | 8:+82125179 | None:intergenic |
| AAATTTGGGTAAGGGAGTCG+AGG | 0.646542 | 8:+82125267 | None:intergenic |
| CACAACCGTAGACTTTCCAT+GGG | 0.652492 | 8:+82125634 | None:intergenic |
| ACCGGAACTAAACATTACAT+GGG | 0.656595 | 8:-82125357 | MsG0880047113.01.T01:CDS |
| AGCCGTCTAAGATGGAAGAA+GGG | 0.658137 | 8:+82125586 | None:intergenic |
| GCTGGCAAAGCAACATGTGT+GGG | 0.665071 | 8:-82125022 | MsG0880047113.01.T01:CDS |
| GTTGAGTTGATGCGTGACAA+GGG | 0.676462 | 8:-82124856 | MsG0880047113.01.T01:CDS |
| TGCTGGCAAAGCAACATGTG+TGG | 0.677132 | 8:-82125023 | MsG0880047113.01.T01:CDS |
| GAACGTCACCCAGAAGAGGT+GGG | 0.689273 | 8:+82125494 | None:intergenic |
| AGAAGGGAACCAGCCCATGG+GGG | 0.712890 | 8:+82125602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATAAGAGTAAAGATTA+TGG | - | Chr8:82125596-82125615 | MsG0880047113.01.T01:CDS | 20.0% |
| !! | TGAATAAGAGTAAAGATTAT+GGG | - | Chr8:82125597-82125616 | MsG0880047113.01.T01:CDS | 20.0% |
| ! | CAAGCATTTAATTGTACAAA+CGG | - | Chr8:82125338-82125357 | MsG0880047113.01.T01:CDS | 25.0% |
| ! | CAAGTGTGTAGTAAAAATTT+GGG | + | Chr8:82125061-82125080 | None:intergenic | 25.0% |
| ! | TCAAGTGTGTAGTAAAAATT+TGG | + | Chr8:82125062-82125081 | None:intergenic | 25.0% |
| ! | TGTAGTAAAAATTTGGGTAA+GGG | + | Chr8:82125055-82125074 | None:intergenic | 25.0% |
| ! | TGTATTGAGTATGTAATTGA+AGG | + | Chr8:82125107-82125126 | None:intergenic | 25.0% |
| !! | AAATTTTTACTACACACTTG+AGG | - | Chr8:82125061-82125080 | MsG0880047113.01.T01:CDS | 25.0% |
| CGTTTGTACAATTAAATGCT+TGG | + | Chr8:82125340-82125359 | None:intergenic | 30.0% | |
| GACTTGATTGTAGAGAAATA+TGG | - | Chr8:82125488-82125507 | MsG0880047113.01.T01:CDS | 30.0% | |
| GTGTAGTAAAAATTTGGGTA+AGG | + | Chr8:82125056-82125075 | None:intergenic | 30.0% | |
| !! | GTTTAAGAGTATCAAACGTT+GGG | - | Chr8:82125640-82125659 | MsG0880047113.01.T01:CDS | 30.0% |
| AACCGGAACTAAACATTACA+TGG | - | Chr8:82124953-82124972 | MsG0880047113.01.T01:CDS | 35.0% | |
| ACCGGAACTAAACATTACAT+GGG | - | Chr8:82124954-82124973 | MsG0880047113.01.T01:CDS | 35.0% | |
| AGATAGGGAAGATTTAAGGA+CGG | + | Chr8:82124907-82124926 | None:intergenic | 35.0% | |
| GAGAAGATAGGGAAGATTTA+AGG | + | Chr8:82124911-82124930 | None:intergenic | 35.0% | |
| GTTGGCTATAGGTAATAGTT+TGG | + | Chr8:82124790-82124809 | None:intergenic | 35.0% | |
| ! | ACCCATGTAATGTTTAGTTC+CGG | + | Chr8:82124958-82124977 | None:intergenic | 35.0% |
| ! | TGTAATGTTTAGTTCCGGTT+TGG | + | Chr8:82124953-82124972 | None:intergenic | 35.0% |
| !! | CGTTTAAGAGTATCAAACGT+TGG | - | Chr8:82125639-82125658 | MsG0880047113.01.T01:CDS | 35.0% |
| !! | GACATATAAGTTGGTTAGAC+CGG | + | Chr8:82124998-82125017 | None:intergenic | 35.0% |
| !! | TGATGTTGAGTTTGTTGAGT+TGG | - | Chr8:82125409-82125428 | MsG0880047113.01.T01:CDS | 35.0% |
| !! | TTTTCACTTGGAAGAGTATG+TGG | - | Chr8:82125366-82125385 | MsG0880047113.01.T01:CDS | 35.0% |
| !!! | TATGGGTTTTTTGAGTATGC+TGG | - | Chr8:82125614-82125633 | MsG0880047113.01.T01:CDS | 35.0% |
| ACCCAGGAAATAGATACACT+TGG | - | Chr8:82125234-82125253 | MsG0880047113.01.T01:CDS | 40.0% | |
| CATCGATCCTCTCTCATAAT+AGG | - | Chr8:82125125-82125144 | MsG0880047113.01.T01:CDS | 40.0% | |
| CCCAAGTGTATCTATTTCCT+GGG | + | Chr8:82125238-82125257 | None:intergenic | 40.0% | |
| CCCAGGAAATAGATACACTT+GGG | - | Chr8:82125235-82125254 | MsG0880047113.01.T01:CDS | 40.0% | |
| CGAGGCATATTCTCGTTAAA+AGG | + | Chr8:82125029-82125048 | None:intergenic | 40.0% | |
| CTTCTTCATCAGCTACAAAC+TGG | + | Chr8:82124842-82124861 | None:intergenic | 40.0% | |
| GGCATATTCTCGTTAAAAGG+TGG | + | Chr8:82125026-82125045 | None:intergenic | 40.0% | |
| GTGGTTCGTGACATATAAGT+TGG | + | Chr8:82125007-82125026 | None:intergenic | 40.0% | |
| TCCCAAGTGTATCTATTTCC+TGG | + | Chr8:82125239-82125258 | None:intergenic | 40.0% | |
| TGAAACTCAAACCGTACAAC+TGG | + | Chr8:82125563-82125582 | None:intergenic | 40.0% | |
| TGGACTTCATAAGACCAAGT+TGG | - | Chr8:82125508-82125527 | MsG0880047113.01.T01:CDS | 40.0% | |
| TTCCCTTCTTCCATCTTAGA+CGG | - | Chr8:82124723-82124742 | MsG0880047113.01.T01:CDS | 40.0% | |
| ! | ACTTCATAAGACCAAGTTGG+CGG | - | Chr8:82125511-82125530 | MsG0880047113.01.T01:CDS | 40.0% |
| !! | AATTGCTTGCTTTGAAGCCA+TGG | - | Chr8:82125535-82125554 | MsG0880047113.01.T01:CDS | 40.0% |
| !! | GAGGAGCATGGATTTGTTAA+CGG | + | Chr8:82124874-82124893 | None:intergenic | 40.0% |
| !! | TAAGAGTATCAAACGTTGGG+TGG | - | Chr8:82125643-82125662 | MsG0880047113.01.T01:CDS | 40.0% |
| AAATTTGGGTAAGGGAGTCG+AGG | + | Chr8:82125047-82125066 | None:intergenic | 45.0% | |
| AGACGCACCTATTATGAGAG+AGG | + | Chr8:82125135-82125154 | None:intergenic | 45.0% | |
| CACAACCGTAGACTTTCCAT+GGG | + | Chr8:82124680-82124699 | None:intergenic | 45.0% | |
| GGTAATGAAGCCGTCTAAGA+TGG | + | Chr8:82124736-82124755 | None:intergenic | 45.0% | |
| TAACCCTACATGGCGACATA+TGG | + | Chr8:82125204-82125223 | None:intergenic | 45.0% | |
| TAAGGACGGTGACAACATTG+AGG | + | Chr8:82124893-82124912 | None:intergenic | 45.0% | |
| TATGTCAGATGCAGATGTGC+TGG | - | Chr8:82125271-82125290 | MsG0880047113.01.T01:CDS | 45.0% | |
| TTCTCCTCTCGCCCATATAA+CGG | - | Chr8:82124926-82124945 | MsG0880047113.01.T01:CDS | 45.0% | |
| TTGAAGCAACCTGCTTGTCT+CGG | - | Chr8:82124651-82124670 | MsG0880047113.01.T01:CDS | 45.0% | |
| ! | AAGCCGTCTAAGATGGAAGA+AGG | + | Chr8:82124729-82124748 | None:intergenic | 45.0% |
| ! | AGCCGTCTAAGATGGAAGAA+GGG | + | Chr8:82124728-82124747 | None:intergenic | 45.0% |
| ! | CAAACGGCGACATTTTCACT+TGG | - | Chr8:82125354-82125373 | MsG0880047113.01.T01:CDS | 45.0% |
| !! | ATAAGTTGGTTAGACCGGAC+CGG | + | Chr8:82124993-82125012 | None:intergenic | 45.0% |
| !! | CTATTTCCTGGGTACCGAAA+CGG | + | Chr8:82125227-82125246 | None:intergenic | 45.0% |
| !! | GTTGAGTTGATGCGTGACAA+GGG | - | Chr8:82125455-82125474 | MsG0880047113.01.T01:CDS | 45.0% |
| !! | TCCGGTTTGGACCGTTATAT+GGG | + | Chr8:82124940-82124959 | None:intergenic | 45.0% |
| !! | TTCCGGTTTGGACCGTTATA+TGG | + | Chr8:82124941-82124960 | None:intergenic | 45.0% |
| AAACCGTACAACTGGCACCA+TGG | + | Chr8:82125555-82125574 | None:intergenic | 50.0% | |
| ACCGAAACGGTAACCCTACA+TGG | + | Chr8:82125214-82125233 | None:intergenic | 50.0% | |
| AGCAGGTTGCTTCAAGGCTT+CGG | + | Chr8:82124646-82124665 | None:intergenic | 50.0% | |
| AGCTGAGTCAACTGCGTCAA+AGG | + | Chr8:82124757-82124776 | None:intergenic | 50.0% | |
| ATGGGCGAGAGGAGAAGATA+GGG | + | Chr8:82124922-82124941 | None:intergenic | 50.0% | |
| CATGGGTCCGATATATGACC+CGG | - | Chr8:82124971-82124990 | MsG0880047113.01.T01:CDS | 50.0% | |
| CTGCCATATGTCGCCATGTA+GGG | - | Chr8:82125198-82125217 | MsG0880047113.01.T01:CDS | 50.0% | |
| GAGACAAGCAGGTTGCTTCA+AGG | + | Chr8:82124652-82124671 | None:intergenic | 50.0% | |
| GCAAGCAATTTCCGCCAACT+TGG | + | Chr8:82125525-82125544 | None:intergenic | 50.0% | |
| GCACAACCGTAGACTTTCCA+TGG | + | Chr8:82124681-82124700 | None:intergenic | 50.0% | |
| GCCATGTAGGGTTACCGTTT+CGG | - | Chr8:82125210-82125229 | MsG0880047113.01.T01:CDS | 50.0% | |
| GCCCATATAACGGTCCAAAC+CGG | - | Chr8:82124936-82124955 | MsG0880047113.01.T01:CDS | 50.0% | |
| GCTGGCAAAGCAACATGTGT+GGG | - | Chr8:82125289-82125308 | MsG0880047113.01.T01:CDS | 50.0% | |
| GGTGACAACATTGAGGAGCA+TGG | + | Chr8:82124886-82124905 | None:intergenic | 50.0% | |
| TATGGGCGAGAGGAGAAGAT+AGG | + | Chr8:82124923-82124942 | None:intergenic | 50.0% | |
| TGCTGGCAAAGCAACATGTG+TGG | - | Chr8:82125288-82125307 | MsG0880047113.01.T01:CDS | 50.0% | |
| ! | AAAGCAACATGTGTGGGCTG+CGG | - | Chr8:82125295-82125314 | MsG0880047113.01.T01:CDS | 50.0% |
| ! | AAGCCATGGTGCCAGTTGTA+CGG | - | Chr8:82125549-82125568 | MsG0880047113.01.T01:CDS | 50.0% |
| ! | TGGGTGACTTCGTTGGCTAT+AGG | + | Chr8:82124801-82124820 | None:intergenic | 50.0% |
| !! | CGTTGAGTTGATGCGTGACA+AGG | - | Chr8:82125454-82125473 | MsG0880047113.01.T01:CDS | 50.0% |
| !! | TAAGTTGGTTAGACCGGACC+GGG | + | Chr8:82124992-82125011 | None:intergenic | 50.0% |
| AACGTTGGGTGGCTAAGCTG+AGG | - | Chr8:82125654-82125673 | MsG0880047113.01.T01:CDS | 55.0% | |
| AAGAAGGGAACCAGCCCATG+GGG | + | Chr8:82124713-82124732 | None:intergenic | 55.0% | |
| AAGCAACCTGCTTGTCTCGG+AGG | - | Chr8:82124654-82124673 | MsG0880047113.01.T01:CDS | 55.0% | |
| ACGAAGTCACCCACCTCTTC+TGG | - | Chr8:82124808-82124827 | MsG0880047113.01.T01:CDS | 55.0% | |
| ACGTTGGGTGGCTAAGCTGA+GGG | - | Chr8:82125655-82125674 | MsG0880047113.01.T01:CDS | 55.0% | |
| ACTGGAACGTCACCCAGAAG+AGG | + | Chr8:82124824-82124843 | None:intergenic | 55.0% | |
| CGAAGTCACCCACCTCTTCT+GGG | - | Chr8:82124809-82124828 | MsG0880047113.01.T01:CDS | 55.0% | |
| GAACGTCACCCAGAAGAGGT+GGG | + | Chr8:82124820-82124839 | None:intergenic | 55.0% | |
| GAAGAAGGGAACCAGCCCAT+GGG | + | Chr8:82124714-82124733 | None:intergenic | 55.0% | |
| GAAGAGGTGGGTGACTTCGT+TGG | + | Chr8:82124808-82124827 | None:intergenic | 55.0% | |
| GACCGGACCGGGTCATATAT+CGG | + | Chr8:82124981-82125000 | None:intergenic | 55.0% | |
| GCGTGACAAGGGTGAGGTTT+GGG | - | Chr8:82125466-82125485 | MsG0880047113.01.T01:CDS | 55.0% | |
| GCTGCCATATGTCGCCATGT+AGG | - | Chr8:82125197-82125216 | MsG0880047113.01.T01:CDS | 55.0% | |
| GGAGGCCCATGGAAAGTCTA+CGG | - | Chr8:82124672-82124691 | MsG0880047113.01.T01:CDS | 55.0% | |
| GTCCGATATATGACCCGGTC+CGG | - | Chr8:82124976-82124995 | MsG0880047113.01.T01:CDS | 55.0% | |
| GTTGATGCGTGACAAGGGTG+AGG | - | Chr8:82125460-82125479 | MsG0880047113.01.T01:CDS | 55.0% | |
| GTTGCTTCAAGGCTTCGGCT+AGG | + | Chr8:82124641-82124660 | None:intergenic | 55.0% | |
| TGCGTGACAAGGGTGAGGTT+TGG | - | Chr8:82125465-82125484 | MsG0880047113.01.T01:CDS | 55.0% | |
| TGGACCGTTATATGGGCGAG+AGG | + | Chr8:82124933-82124952 | None:intergenic | 55.0% | |
| AGAAGGGAACCAGCCCATGG+GGG | + | Chr8:82124712-82124731 | None:intergenic | 60.0% | |
| GGAACGTCACCCAGAAGAGG+TGG | + | Chr8:82124821-82124840 | None:intergenic | 60.0% | |
| GGAAGAAGGGAACCAGCCCA+TGG | + | Chr8:82124715-82124734 | None:intergenic | 60.0% | |
| GGGTTACCGTTTCGGTACCC+AGG | - | Chr8:82125218-82125237 | MsG0880047113.01.T01:CDS | 60.0% | |
| CATGGGCCTCCGAGACAAGC+AGG | + | Chr8:82124663-82124682 | None:intergenic | 65.0% | |
| CTGCTTGTCTCGGAGGCCCA+TGG | - | Chr8:82124661-82124680 | MsG0880047113.01.T01:CDS | 65.0% | |
| GGAACCAGCCCATGGGGGAA+CGG | + | Chr8:82124707-82124726 | None:intergenic | 65.0% | |
| TGTGCTCGCCGTTCCCCCAT+GGG | - | Chr8:82124696-82124715 | MsG0880047113.01.T01:CDS | 65.0% | |
| TTGTGCTCGCCGTTCCCCCA+TGG | - | Chr8:82124695-82124714 | MsG0880047113.01.T01:CDS | 65.0% | |
| CTCGCCGTTCCCCCATGGGC+TGG | - | Chr8:82124700-82124719 | MsG0880047113.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 82124624 | 82125709 | 82124624 | ID=MsG0880047113.01;Name=MsG0880047113.01 |
| Chr8 | mRNA | 82124624 | 82125709 | 82124624 | ID=MsG0880047113.01.T01;Parent=MsG0880047113.01;Name=MsG0880047113.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|361 |
| Chr8 | exon | 82124624 | 82125709 | 82124624 | ID=MsG0880047113.01.T01:exon:35218;Parent=MsG0880047113.01.T01 |
| Chr8 | CDS | 82124624 | 82125709 | 82124624 | ID=MsG0880047113.01.T01:cds;Parent=MsG0880047113.01.T01 |
| Gene Sequence |
| Protein sequence |
