Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024217.01.T01 | P30077.1 | 100 | 389 | 0 | 0 | 1 | 389 | 1 | 389 | 0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024217.01.T01 | P30077 | 100 | 389 | 0 | 0 | 1 | 389 | 1 | 389 | 0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024217.01.T01 | A0A396HLU4 | 99.229 | 389 | 3 | 0 | 1 | 389 | 50 | 438 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0580024217.01 | 0.817656 | 2.944676e-52 | 2.157340e-49 |
| MsG0080048036.01 | MsG0580024217.01 | 0.851152 | 1.069195e-60 | 2.144085e-57 |
| MsG0080048301.01 | MsG0580024217.01 | 0.824701 | 6.999135e-54 | 6.247364e-51 |
| MsG0080048347.01 | MsG0580024217.01 | 0.853018 | 3.152575e-61 | 6.715549e-58 |
| MsG0080048349.01 | MsG0580024217.01 | 0.839274 | 1.747959e-57 | 2.401647e-54 |
| MsG0080048350.01 | MsG0580024217.01 | 0.802596 | 5.204761e-49 | 2.559857e-46 |
| MsG0080048352.01 | MsG0580024217.01 | 0.861301 | 1.129543e-63 | 3.181717e-60 |
| MsG0080049154.01 | MsG0580024217.01 | 0.851552 | 8.242248e-61 | 1.674418e-57 |
| MsG0180000234.01 | MsG0580024217.01 | 0.810118 | 1.351221e-50 | 8.077099e-48 |
| MsG0180000399.01 | MsG0580024217.01 | 0.824887 | 6.325925e-54 | 5.676760e-51 |
| MsG0180000929.01 | MsG0580024217.01 | 0.814457 | 1.525504e-51 | 1.024142e-48 |
| MsG0180001463.01 | MsG0580024217.01 | 0.840607 | 7.853510e-58 | 1.124494e-54 |
| MsG0180001513.01 | MsG0580024217.01 | 0.827174 | 1.809974e-54 | 1.733974e-51 |
| MsG0180001533.01 | MsG0580024217.01 | 0.876097 | 1.830070e-68 | 8.760195e-65 |
| MsG0180001796.01 | MsG0580024217.01 | 0.803257 | 3.799601e-49 | 1.900523e-46 |
| MsG0180001797.01 | MsG0580024217.01 | 0.842037 | 3.302326e-58 | 4.943839e-55 |
| MsG0180001800.01 | MsG0580024217.01 | 0.813964 | 1.960505e-51 | 1.298663e-48 |
| MsG0180002935.01 | MsG0580024217.01 | 0.835542 | 1.579669e-56 | 1.937599e-53 |
| MsG0180003235.01 | MsG0580024217.01 | 0.835268 | 1.852845e-56 | 2.254405e-53 |
| MsG0180003237.01 | MsG0580024217.01 | 0.829891 | 3.994439e-55 | 4.142881e-52 |
| MsG0180003250.01 | MsG0580024217.01 | 0.806233 | 9.085420e-50 | 4.905884e-47 |
| MsG0180003605.01 | MsG0580024217.01 | -0.804872 | 1.753221e-49 | 9.142587e-47 |
| MsG0180004942.01 | MsG0580024217.01 | 0.843902 | 1.053131e-58 | 1.672094e-55 |
| MsG0180004957.01 | MsG0580024217.01 | -0.810730 | 9.967488e-51 | 6.055458e-48 |
| MsG0180005102.01 | MsG0580024217.01 | 0.804423 | 2.176073e-49 | 1.121491e-46 |
| MsG0180005356.01 | MsG0580024217.01 | 0.835981 | 1.222538e-56 | 1.519600e-53 |
| MsG0180005357.01 | MsG0580024217.01 | 0.816140 | 6.447903e-52 | 4.531853e-49 |
| MsG0180005358.01 | MsG0580024217.01 | 0.850601 | 1.527749e-60 | 3.008499e-57 |
| MsG0180005417.01 | MsG0580024217.01 | 0.843043 | 1.785719e-58 | 2.759016e-55 |
| MsG0180005648.01 | MsG0580024217.01 | 0.859952 | 2.896266e-63 | 7.785841e-60 |
| MsG0280006442.01 | MsG0580024217.01 | 0.852723 | 3.829180e-61 | 8.075412e-58 |
| MsG0280010802.01 | MsG0580024217.01 | 0.851609 | 7.940698e-61 | 1.615964e-57 |
| MsG0280011236.01 | MsG0580024217.01 | 0.822176 | 2.724913e-53 | 2.263629e-50 |
| MsG0280011238.01 | MsG0580024217.01 | 0.820126 | 8.085312e-53 | 6.343200e-50 |
| MsG0280011267.01 | MsG0580024217.01 | 0.837402 | 5.310114e-57 | 6.889490e-54 |
| MsG0280011449.01 | MsG0580024217.01 | -0.832357 | 9.899320e-56 | 1.103801e-52 |
| MsG0380011635.01 | MsG0580024217.01 | 0.859567 | 3.782613e-63 | 1.003342e-59 |
| MsG0380011636.01 | MsG0580024217.01 | 0.819397 | 1.186544e-52 | 9.120125e-50 |
| MsG0380011638.01 | MsG0580024217.01 | 0.811087 | 8.343562e-51 | 5.117184e-48 |
| MsG0380011701.01 | MsG0580024217.01 | 0.810828 | 9.494982e-51 | 5.783409e-48 |
| MsG0380011968.01 | MsG0580024217.01 | 0.831179 | 1.933106e-55 | 2.081573e-52 |
| MsG0380011974.01 | MsG0580024217.01 | 0.851904 | 6.548215e-61 | 1.345074e-57 |
| MsG0380012254.01 | MsG0580024217.01 | 0.832193 | 1.087195e-55 | 1.206324e-52 |
| MsG0380012654.01 | MsG0580024217.01 | 0.852745 | 3.772212e-61 | 7.961125e-58 |
| MsG0380013272.01 | MsG0580024217.01 | 0.826587 | 2.500226e-54 | 2.354542e-51 |
| MsG0380013285.01 | MsG0580024217.01 | 0.819155 | 1.347332e-52 | 1.028647e-49 |
| MsG0380013300.01 | MsG0580024217.01 | 0.823971 | 1.039134e-53 | 9.083144e-51 |
| MsG0480018521.01 | MsG0580024217.01 | 0.887278 | 1.641848e-72 | 1.213140e-68 |
| MsG0480018522.01 | MsG0580024217.01 | 0.882094 | 1.389013e-70 | 8.349229e-67 |
| MsG0480019301.01 | MsG0580024217.01 | 0.808925 | 2.436788e-50 | 1.411182e-47 |
| MsG0480019346.01 | MsG0580024217.01 | 0.800392 | 1.472788e-48 | 6.849727e-46 |
| MsG0480019348.01 | MsG0580024217.01 | 0.803148 | 4.001991e-49 | 1.996196e-46 |
| MsG0480019923.01 | MsG0580024217.01 | 0.831935 | 1.258952e-55 | 1.386598e-52 |
| MsG0480021133.01 | MsG0580024217.01 | 0.805199 | 1.498013e-49 | 7.876821e-47 |
| MsG0480022309.01 | MsG0580024217.01 | 0.872218 | 3.765140e-67 | 1.562665e-63 |
| MsG0480022310.01 | MsG0580024217.01 | 0.838193 | 3.326682e-57 | 4.422199e-54 |
| MsG0480022311.01 | MsG0580024217.01 | 0.860603 | 1.841140e-63 | 5.061435e-60 |
| MsG0480022638.01 | MsG0580024217.01 | 0.826301 | 2.925225e-54 | 2.732557e-51 |
| MsG0480022735.01 | MsG0580024217.01 | 0.812332 | 4.471160e-51 | 2.834957e-48 |
| MsG0480022833.01 | MsG0580024217.01 | 0.834287 | 3.270983e-56 | 3.864381e-53 |
| MsG0480023006.01 | MsG0580024217.01 | -0.804529 | 2.068267e-49 | 1.068856e-46 |
| MsG0480023102.01 | MsG0580024217.01 | 0.848479 | 5.972901e-60 | 1.097705e-56 |
| MsG0480023107.01 | MsG0580024217.01 | 0.854125 | 1.515840e-61 | 3.351380e-58 |
| MsG0480023349.01 | MsG0580024217.01 | 0.804380 | 2.221249e-49 | 1.143588e-46 |
| MsG0480023850.01 | MsG0580024217.01 | -0.807948 | 3.938791e-50 | 2.223162e-47 |
| MsG0480023921.01 | MsG0580024217.01 | 0.800359 | 1.495518e-48 | 6.949827e-46 |
| MsG0580024086.01 | MsG0580024217.01 | 0.864877 | 8.860826e-65 | 2.824934e-61 |
| MsG0580024138.01 | MsG0580024217.01 | 0.814266 | 1.681859e-51 | 1.123264e-48 |
| MsG0580024176.01 | MsG0580024217.01 | 0.802901 | 4.501757e-49 | 2.231390e-46 |
| MsG0580024202.01 | MsG0580024217.01 | 0.877494 | 6.006862e-69 | 3.026727e-65 |
| MsG0580024207.01 | MsG0580024217.01 | 0.862384 | 5.265145e-64 | 1.538987e-60 |
| MsG0580024217.01 | MsG0580024218.01 | 0.904439 | 1.226553e-79 | 1.897559e-75 |
| MsG0580024217.01 | MsG0580024219.01 | 0.955605 | 2.062774e-113 | 6.316804e-108 |
| MsG0580024217.01 | MsG0580024220.01 | 0.872661 | 2.679822e-67 | 1.130699e-63 |
| MsG0580024217.01 | MsG0580024260.01 | 0.829621 | 4.647373e-55 | 4.781887e-52 |
| MsG0580024217.01 | MsG0580024408.01 | 0.861567 | 9.373155e-64 | 2.663766e-60 |
| MsG0580024217.01 | MsG0580024488.01 | 0.808326 | 3.272669e-50 | 1.865829e-47 |
| MsG0580024217.01 | MsG0580024986.01 | 0.924861 | 3.997709e-90 | 1.727422e-85 |
| MsG0580024217.01 | MsG0580024990.01 | 0.922609 | 7.868402e-89 | 3.003801e-84 |
| MsG0580024217.01 | MsG0580025590.01 | 0.801002 | 1.105703e-48 | 5.223057e-46 |
| MsG0580024217.01 | MsG0580025682.01 | 0.808127 | 3.607616e-50 | 2.045963e-47 |
| MsG0580024217.01 | MsG0580025870.01 | 0.823386 | 1.424110e-53 | 1.224288e-50 |
| MsG0580024217.01 | MsG0580025961.01 | 0.828777 | 7.443837e-55 | 7.471737e-52 |
| MsG0580024217.01 | MsG0580025965.01 | 0.893951 | 3.895015e-75 | 3.793608e-71 |
| MsG0580024217.01 | MsG0580026492.01 | 0.820964 | 5.192109e-53 | 4.169148e-50 |
| MsG0580024217.01 | MsG0580026925.01 | 0.865094 | 7.574250e-65 | 2.434406e-61 |
| MsG0580024217.01 | MsG0580027638.01 | 0.837630 | 4.640683e-57 | 6.064340e-54 |
| MsG0580024217.01 | MsG0580027751.01 | 0.813594 | 2.365650e-51 | 1.551452e-48 |
| MsG0580024217.01 | MsG0580027752.01 | 0.806451 | 8.173241e-50 | 4.437809e-47 |
| MsG0580024217.01 | MsG0580027753.01 | 0.817829 | 2.691492e-52 | 1.981253e-49 |
| MsG0580024217.01 | MsG0580028490.01 | 0.821625 | 3.656036e-53 | 2.989900e-50 |
| MsG0580024217.01 | MsG0580028899.01 | 0.829444 | 5.130784e-55 | 5.251993e-52 |
| MsG0580024217.01 | MsG0580029664.01 | 0.806586 | 7.653429e-50 | 4.169775e-47 |
| MsG0580024217.01 | MsG0580029820.01 | -0.804981 | 1.664176e-49 | 8.701660e-47 |
| MsG0580024217.01 | MsG0580030133.01 | 0.875182 | 3.768027e-68 | 1.743255e-64 |
| MsG0580024217.01 | MsG0580030135.01 | 0.912303 | 2.273718e-83 | 5.081983e-79 |
| MsG0580024217.01 | MsG0580030145.01 | 0.899001 | 3.051027e-77 | 3.699123e-73 |
| MsG0580024217.01 | MsG0680031009.01 | 0.888998 | 3.590062e-73 | 2.845167e-69 |
| MsG0580024217.01 | MsG0680031804.01 | 0.817827 | 2.694372e-52 | 1.983255e-49 |
| MsG0580024217.01 | MsG0680032343.01 | 0.805893 | 1.071495e-49 | 5.735442e-47 |
| MsG0580024217.01 | MsG0680033347.01 | 0.812175 | 4.839314e-51 | 3.055204e-48 |
| MsG0580024217.01 | MsG0680034255.01 | 0.816094 | 6.600299e-52 | 4.633335e-49 |
| MsG0580024217.01 | MsG0680034316.01 | 0.820000 | 8.641579e-53 | 6.755256e-50 |
| MsG0580024217.01 | MsG0680034317.01 | 0.821658 | 3.591105e-53 | 2.939663e-50 |
| MsG0580024217.01 | MsG0680035841.01 | 0.834943 | 2.236863e-56 | 2.695182e-53 |
| MsG0580024217.01 | MsG0780035953.01 | 0.848387 | 6.332687e-60 | 1.160201e-56 |
| MsG0580024217.01 | MsG0780036208.01 | 0.823484 | 1.351227e-53 | 1.164967e-50 |
| MsG0580024217.01 | MsG0780036367.01 | 0.817063 | 4.003916e-52 | 2.886148e-49 |
| MsG0580024217.01 | MsG0780036472.01 | 0.837980 | 3.773132e-57 | 4.984084e-54 |
| MsG0580024217.01 | MsG0780036649.01 | 0.807876 | 4.079413e-50 | 2.298144e-47 |
| MsG0580024217.01 | MsG0780036661.01 | 0.852474 | 4.510005e-61 | 9.434040e-58 |
| MsG0580024217.01 | MsG0780036747.01 | -0.833208 | 6.086860e-56 | 6.961820e-53 |
| MsG0580024217.01 | MsG0780036925.01 | -0.824500 | 7.806109e-54 | 6.926509e-51 |
| MsG0580024217.01 | MsG0780036960.01 | 0.819544 | 1.098503e-52 | 8.478437e-50 |
| MsG0580024217.01 | MsG0780037917.01 | 0.816131 | 6.477753e-52 | 4.551614e-49 |
| MsG0580024217.01 | MsG0780037943.01 | 0.816940 | 4.268158e-52 | 3.066377e-49 |
| MsG0580024217.01 | MsG0780038519.01 | 0.809527 | 1.811015e-50 | 1.065812e-47 |
| MsG0580024217.01 | MsG0780038622.01 | 0.805890 | 1.072941e-49 | 5.742765e-47 |
| MsG0580024217.01 | MsG0780038818.01 | 0.820730 | 5.877082e-53 | 4.687954e-50 |
| MsG0580024217.01 | MsG0780038860.01 | 0.852628 | 4.075249e-61 | 8.567243e-58 |
| MsG0580024217.01 | MsG0780038922.01 | 0.851907 | 6.534993e-61 | 1.342500e-57 |
| MsG0580024217.01 | MsG0780038939.01 | 0.808070 | 3.709264e-50 | 2.100401e-47 |
| MsG0580024217.01 | MsG0780038963.01 | 0.895336 | 1.056199e-75 | 1.091219e-71 |
| MsG0580024217.01 | MsG0780039190.01 | 0.815104 | 1.096811e-51 | 7.492534e-49 |
| MsG0580024217.01 | MsG0780039576.01 | 0.877906 | 4.315888e-69 | 2.208567e-65 |
| MsG0580024217.01 | MsG0780039968.01 | 0.819296 | 1.251357e-52 | 9.590974e-50 |
| MsG0580024217.01 | MsG0780039978.01 | 0.822692 | 2.067753e-53 | 1.743279e-50 |
| MsG0580024217.01 | MsG0780040498.01 | 0.801284 | 9.680824e-49 | 4.605406e-46 |
| MsG0580024217.01 | MsG0780040553.01 | 0.808630 | 2.818391e-50 | 1.619498e-47 |
| MsG0580024217.01 | MsG0780040615.01 | 0.855051 | 8.174913e-62 | 1.863161e-58 |
| MsG0580024217.01 | MsG0780040805.01 | 0.829604 | 4.690390e-55 | 4.823923e-52 |
| MsG0580024217.01 | MsG0780040806.01 | 0.832971 | 6.970925e-56 | 7.916731e-53 |
| MsG0580024217.01 | MsG0780040977.01 | 0.814526 | 1.473225e-51 | 9.909073e-49 |
| MsG0580024217.01 | MsG0780041316.01 | 0.806690 | 7.276237e-50 | 3.974809e-47 |
| MsG0580024217.01 | MsG0780041556.01 | 0.829549 | 4.838890e-55 | 4.968202e-52 |
| MsG0580024217.01 | MsG0880041978.01 | 0.830598 | 2.684285e-55 | 2.841331e-52 |
| MsG0580024217.01 | MsG0880042740.01 | 0.830983 | 2.159549e-55 | 2.312121e-52 |
| MsG0580024217.01 | MsG0880042895.01 | -0.802212 | 6.245413e-49 | 3.041666e-46 |
| MsG0580024217.01 | MsG0880043017.01 | 0.811967 | 5.370281e-51 | 3.371244e-48 |
| MsG0580024217.01 | MsG0880043364.01 | 0.827456 | 1.549263e-54 | 1.496493e-51 |
| MsG0580024217.01 | MsG0880043481.01 | 0.861344 | 1.095894e-63 | 3.091327e-60 |
| MsG0580024217.01 | MsG0880043828.01 | 0.804126 | 2.508851e-49 | 1.283246e-46 |
| MsG0580024217.01 | MsG0880045677.01 | 0.852591 | 4.174446e-61 | 8.765155e-58 |
| MsG0580024217.01 | MsG0880045755.01 | -0.822618 | 2.151140e-53 | 1.809946e-50 |
| MsG0580024217.01 | MsG0880046038.01 | 0.810679 | 1.022474e-50 | 6.203264e-48 |
| MsG0580024217.01 | MsG0880046429.01 | 0.850133 | 2.067827e-60 | 4.009955e-57 |
| MsG0580024217.01 | MsG0880046814.01 | -0.823515 | 1.329152e-53 | 1.146927e-50 |
| MsG0580024217.01 | MsG0880046961.01 | 0.837795 | 4.209094e-57 | 5.528426e-54 |
| MsG0580024217.01 | MsG0880047113.01 | 0.805805 | 1.118187e-49 | 5.971875e-47 |
| MsG0580024217.01 | MsG0880047251.01 | -0.838244 | 3.226346e-57 | 4.295364e-54 |
| MsG0580024217.01 | MsG0880047398.01 | 0.801383 | 9.238968e-49 | 4.406091e-46 |
| MsG0580024217.01 | MsG0880047542.01 | 0.858834 | 6.273293e-63 | 1.622772e-59 |
| MsG0580024217.01 | MsG0880047665.01 | 0.820572 | 6.391447e-53 | 5.075834e-50 |
| MsG0580024217.01 | MsG0880047714.01 | 0.801969 | 7.005164e-49 | 3.390565e-46 |
| MsG0380015080.01 | MsG0580024217.01 | 0.827169 | 1.814899e-54 | 1.738431e-51 |
| MsG0380015110.01 | MsG0580024217.01 | 0.825160 | 5.454364e-54 | 4.932684e-51 |
| MsG0380015572.01 | MsG0580024217.01 | 0.802989 | 4.318522e-49 | 2.145208e-46 |
| MsG0380015660.01 | MsG0580024217.01 | 0.802999 | 4.297686e-49 | 2.135399e-46 |
| MsG0380016045.01 | MsG0580024217.01 | 0.843785 | 1.131607e-58 | 1.789797e-55 |
| MsG0380016086.01 | MsG0580024217.01 | 0.873932 | 1.001891e-67 | 4.425454e-64 |
| MsG0380016476.01 | MsG0580024217.01 | 0.804076 | 2.569669e-49 | 1.312712e-46 |
| MsG0380016862.01 | MsG0580024217.01 | 0.823810 | 1.133670e-53 | 9.865200e-51 |
| MsG0380017151.01 | MsG0580024217.01 | 0.863116 | 3.131336e-64 | 9.387760e-61 |
| MsG0380017173.01 | MsG0580024217.01 | 0.814119 | 1.812181e-51 | 1.205463e-48 |
| MsG0380017405.01 | MsG0580024217.01 | -0.800552 | 1.365886e-48 | 6.378378e-46 |
| MsG0380017690.01 | MsG0580024217.01 | 0.826652 | 2.412448e-54 | 2.276220e-51 |
| MsG0380017754.01 | MsG0580024217.01 | 0.829599 | 4.704879e-55 | 4.838041e-52 |
| MsG0380018070.01 | MsG0580024217.01 | 0.810296 | 1.237197e-50 | 7.429355e-48 |
| MsG0480018406.01 | MsG0580024217.01 | 0.808107 | 3.642935e-50 | 2.064849e-47 |
| MsG0480018409.01 | MsG0580024217.01 | 0.805985 | 1.024906e-49 | 5.499237e-47 |
| MsG0480018440.01 | MsG0580024217.01 | 0.829088 | 6.259770e-55 | 6.341063e-52 |
| MsG0280006964.01 | MsG0580024217.01 | -0.805593 | 1.238744e-49 | 6.579690e-47 |
| MsG0280007216.01 | MsG0580024217.01 | 0.803244 | 3.824164e-49 | 1.912134e-46 |
| MsG0280007602.01 | MsG0580024217.01 | 0.812290 | 4.567847e-51 | 2.892848e-48 |
| MsG0280007716.01 | MsG0580024217.01 | 0.810684 | 1.019682e-50 | 6.187157e-48 |
| MsG0280007906.01 | MsG0580024217.01 | 0.869522 | 2.907408e-66 | 1.094658e-62 |
| MsG0280007908.01 | MsG0580024217.01 | 0.861090 | 1.309875e-63 | 3.661866e-60 |
| MsG0280007911.01 | MsG0580024217.01 | 0.883298 | 5.050773e-71 | 3.183820e-67 |
| MsG0280007922.01 | MsG0580024217.01 | 0.801081 | 1.065140e-48 | 5.041433e-46 |
| MsG0280008405.01 | MsG0580024217.01 | 0.831587 | 1.534234e-55 | 1.672447e-52 |
| MsG0280009657.01 | MsG0580024217.01 | 0.815769 | 7.803126e-52 | 5.429268e-49 |
| MsG0280009667.01 | MsG0580024217.01 | 0.802405 | 5.698110e-49 | 2.789024e-46 |
| MsG0280010410.01 | MsG0580024217.01 | 0.831102 | 2.018488e-55 | 2.168677e-52 |
| MsG0280010461.01 | MsG0580024217.01 | -0.802577 | 5.252912e-49 | 2.582176e-46 |
| MsG0280010515.01 | MsG0580024217.01 | 0.806953 | 6.404436e-50 | 3.522408e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024217.01.T01 | MTR_5g007713 | 99.229 | 389 | 3 | 0 | 1 | 389 | 1 | 389 | 0.0 | 803 |
| MsG0580024217.01.T01 | MTR_5g007717 | 98.458 | 389 | 6 | 0 | 1 | 389 | 1 | 389 | 0.0 | 800 |
| MsG0580024217.01.T01 | MTR_1g098140 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 785 |
| MsG0580024217.01.T01 | MTR_1g097935 | 96.658 | 389 | 13 | 0 | 1 | 389 | 1 | 389 | 0.0 | 782 |
| MsG0580024217.01.T01 | MTR_7g016820 | 96.401 | 389 | 14 | 0 | 1 | 389 | 1 | 389 | 0.0 | 781 |
| MsG0580024217.01.T01 | MTR_1g097910 | 96.401 | 389 | 14 | 0 | 1 | 389 | 1 | 389 | 0.0 | 781 |
| MsG0580024217.01.T01 | MTR_5g007730 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 780 |
| MsG0580024217.01.T01 | MTR_7g016800 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 780 |
| MsG0580024217.01.T01 | MTR_7g016700 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 778 |
| MsG0580024217.01.T01 | MTR_7g016720 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 777 |
| MsG0580024217.01.T01 | MTR_5g007760 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 775 |
| MsG0580024217.01.T01 | MTR_7g016780 | 95.630 | 389 | 17 | 0 | 1 | 389 | 1 | 389 | 0.0 | 775 |
| MsG0580024217.01.T01 | MTR_3g083920 | 91.237 | 388 | 34 | 0 | 1 | 388 | 1 | 388 | 0.0 | 753 |
| MsG0580024217.01.T01 | MTR_3g083910 | 89.948 | 388 | 39 | 0 | 1 | 388 | 1 | 388 | 0.0 | 748 |
| MsG0580024217.01.T01 | MTR_2g058470 | 87.404 | 389 | 49 | 0 | 1 | 389 | 1 | 389 | 0.0 | 719 |
| MsG0580024217.01.T01 | MTR_3g086260 | 82.732 | 388 | 67 | 0 | 1 | 388 | 1 | 388 | 0.0 | 690 |
| MsG0580024217.01.T01 | MTR_7g084300 | 79.949 | 389 | 78 | 0 | 1 | 389 | 1 | 389 | 0.0 | 673 |
| MsG0580024217.01.T01 | MTR_7g113405 | 95.380 | 303 | 14 | 0 | 87 | 389 | 1 | 303 | 0.0 | 596 |
| MsG0580024217.01.T01 | MTR_3g088675 | 66.324 | 389 | 131 | 0 | 1 | 389 | 1 | 389 | 0.0 | 580 |
| MsG0580024217.01.T01 | MTR_5g007740 | 80.675 | 326 | 63 | 0 | 64 | 389 | 1 | 326 | 0.0 | 554 |
| MsG0580024217.01.T01 | MTR_5g007723 | 69.444 | 396 | 74 | 5 | 12 | 389 | 32 | 398 | 0.0 | 536 |
| MsG0580024217.01.T01 | MTR_5g007770 | 78.333 | 300 | 32 | 2 | 70 | 369 | 1 | 267 | 4.74e-169 | 473 |
| MsG0580024217.01.T01 | MTR_3g088670 | 48.462 | 390 | 187 | 6 | 10 | 388 | 2 | 388 | 1.30e-128 | 375 |
| MsG0580024217.01.T01 | MTR_4g075560 | 41.579 | 380 | 215 | 4 | 11 | 387 | 13 | 388 | 1.24e-101 | 306 |
| MsG0580024217.01.T01 | MTR_4g078730 | 36.461 | 373 | 230 | 2 | 15 | 387 | 24 | 389 | 4.39e-91 | 279 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024217.01.T01 | AT5G13930 | 82.474 | 388 | 67 | 1 | 3 | 389 | 8 | 395 | 0.0 | 675 |
| MsG0580024217.01.T01 | AT4G34850 | 39.788 | 377 | 223 | 3 | 15 | 389 | 18 | 392 | 1.14e-96 | 294 |
| MsG0580024217.01.T01 | AT4G00040 | 38.520 | 392 | 229 | 6 | 1 | 387 | 1 | 385 | 2.97e-94 | 287 |
| MsG0580024217.01.T01 | AT1G02050 | 38.992 | 377 | 218 | 6 | 15 | 387 | 24 | 392 | 6.06e-86 | 266 |
| MsG0580024217.01.T01 | AT4G34850 | 39.375 | 320 | 191 | 2 | 72 | 389 | 1 | 319 | 1.81e-81 | 252 |
Find 112 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATAGGTTTCTCAATTTC+TGG | 0.117134 | 5:-2148639 | None:intergenic |
| CTTGTTGGACAAGCACTCTT+TGG | 0.251490 | 5:+2148576 | MsG0580024217.01.T01:CDS |
| CTGATTATAATTCAATCTTC+TGG | 0.262797 | 5:+2148829 | MsG0580024217.01.T01:CDS |
| TTATAATCAGAGATGTTTAA+TGG | 0.263273 | 5:-2148816 | None:intergenic |
| GTTTCTCAATTTCTGGTATT+GGG | 0.265654 | 5:-2148632 | None:intergenic |
| GGTTTCTCAATTTCTGGTAT+TGG | 0.273222 | 5:-2148633 | None:intergenic |
| AAGTGTGTAATCTTTGATTT+TGG | 0.277272 | 5:-2148309 | None:intergenic |
| CTTGACTGGGGTGTGTTGTT+TGG | 0.302662 | 5:+2149044 | MsG0580024217.01.T01:CDS |
| AACCTATATTTGAGATGGTT+TGG | 0.308691 | 5:+2148652 | MsG0580024217.01.T01:CDS |
| GCTTCGTTTGGCCAAGGACT+TGG | 0.325403 | 5:+2148461 | MsG0580024217.01.T01:CDS |
| AGAGAAGTACTTAGTGAATA+TGG | 0.329263 | 5:+2148933 | MsG0580024217.01.T01:CDS |
| GATCAAGTTGAACAAAAGTT+AGG | 0.336805 | 5:+2148882 | MsG0580024217.01.T01:CDS |
| TCAAATGAAAGTAAACTCTA+TGG | 0.371913 | 5:-2147722 | None:intergenic |
| GTGTTGTTTGGCTTCGGACC+TGG | 0.373681 | 5:+2149056 | MsG0580024217.01.T01:CDS |
| TGAATACATGGCACCTTCAT+TGG | 0.375324 | 5:+2148203 | MsG0580024217.01.T01:CDS |
| TACCAACTCACAAAACTCTT+AGG | 0.382277 | 5:+2148375 | MsG0580024217.01.T01:CDS |
| CACCTTCTTAAAGATGTTCC+TGG | 0.385004 | 5:+2148747 | MsG0580024217.01.T01:CDS |
| CCAATGGCCATGATGGTTGC+AGG | 0.395368 | 5:-2147832 | None:intergenic |
| AGGTGGGACGGTGCTTCGTT+TGG | 0.401843 | 5:+2148449 | MsG0580024217.01.T01:CDS |
| GTTTCTATGTAGCAATGATA+TGG | 0.407564 | 5:-2147755 | None:intergenic |
| GGAGCTGCTGCACTCATTGT+TGG | 0.411529 | 5:+2148603 | MsG0580024217.01.T01:CDS |
| ACTCATTTGGACAGTCTTGT+TGG | 0.418448 | 5:+2148561 | MsG0580024217.01.T01:CDS |
| ACAGTACTTAGTTGTAGAAA+AGG | 0.422457 | 5:-2147696 | None:intergenic |
| TCAATGGCTCCCTCACTGTC+TGG | 0.423950 | 5:-2148693 | None:intergenic |
| TGGGGTGTGTTGTTTGGCTT+CGG | 0.424646 | 5:+2149050 | MsG0580024217.01.T01:CDS |
| CCACAGGAGAAGGCCTTGAC+TGG | 0.427586 | 5:+2149030 | MsG0580024217.01.T01:CDS |
| TCAAGAATTGCGGGTCCACC+TGG | 0.431851 | 5:-2148861 | None:intergenic |
| AATCAGAGATGTTTAATGGT+TGG | 0.432244 | 5:-2148812 | None:intergenic |
| GACAGTGAGGGAGCCATTGA+TGG | 0.433253 | 5:+2148696 | MsG0580024217.01.T01:CDS |
| CTGAAATTCGTCAGGCTCAA+AGG | 0.435277 | 5:+2147800 | MsG0580024217.01.T01:CDS |
| GTCCAAACCATCTCAAATAT+AGG | 0.437103 | 5:-2148654 | None:intergenic |
| GACTTGGCTGAGAACAATAA+AGG | 0.438047 | 5:+2148477 | MsG0580024217.01.T01:CDS |
| AGATGAGATGCGAAAGAAAT+CGG | 0.446954 | 5:+2148989 | MsG0580024217.01.T01:CDS |
| CTTTGTTCAACACAGTTGGC+TGG | 0.449203 | 5:-2147865 | None:intergenic |
| ACCTTCATTGGATGCTAGGC+AGG | 0.450943 | 5:+2148215 | MsG0580024217.01.T01:CDS |
| CAGTGAAGGCCATAAAAGAA+TGG | 0.456620 | 5:+2148280 | MsG0580024217.01.T01:CDS |
| ATTGTTCTCAGCCAAGTCCT+TGG | 0.461734 | 5:-2148472 | None:intergenic |
| CACCTGCAAAACATCCTTGT+TGG | 0.464560 | 5:-2148431 | None:intergenic |
| TCAACTTGATCAAGAATTGC+GGG | 0.468071 | 5:-2148870 | None:intergenic |
| CATGTATCTCCTCTTGATCA+TGG | 0.469562 | 5:-2148139 | None:intergenic |
| GCAGGACATGGTGGTGGTAG+AGG | 0.474656 | 5:+2148233 | MsG0580024217.01.T01:CDS |
| AGTGAAGGCCATAAAAGAAT+GGG | 0.475863 | 5:+2148281 | MsG0580024217.01.T01:CDS |
| ACTCTGTATTTATTCTTACA+TGG | 0.478020 | 5:-2149173 | None:intergenic |
| GCGAAAGAAATCGGCACAAG+CGG | 0.478166 | 5:+2148998 | MsG0580024217.01.T01:CDS |
| ACCTTCTTAAAGATGTTCCT+GGG | 0.484500 | 5:+2148748 | MsG0580024217.01.T01:CDS |
| CTTAGTTGTAGAAAAGGAAA+AGG | 0.485627 | 5:-2147690 | None:intergenic |
| GTCTTCGCCCATACGTGAAA+AGG | 0.489151 | 5:+2148397 | MsG0580024217.01.T01:CDS |
| TGAAATTCGTCAGGCTCAAA+GGG | 0.491377 | 5:+2147801 | MsG0580024217.01.T01:CDS |
| TGGTCCTAGTGATACTCATT+TGG | 0.493191 | 5:+2148548 | MsG0580024217.01.T01:CDS |
| GATGGTCATCTCCGTGAAGC+TGG | 0.495570 | 5:+2148714 | MsG0580024217.01.T01:CDS |
| GACGGTGCTTCGTTTGGCCA+AGG | 0.496087 | 5:+2148455 | MsG0580024217.01.T01:CDS |
| TGAGAAACCTATATTTGAGA+TGG | 0.507221 | 5:+2148647 | MsG0580024217.01.T01:CDS |
| TGCAGTGCCAATGGCCATGA+TGG | 0.507335 | 5:-2147839 | None:intergenic |
| CCTGCAACCATCATGGCCAT+TGG | 0.508648 | 5:+2147832 | MsG0580024217.01.T01:CDS |
| TGGCACCTTCATTGGATGCT+AGG | 0.509747 | 5:+2148211 | MsG0580024217.01.T01:CDS |
| GAGTGTATCTGAAATTCGTC+AGG | 0.510346 | 5:+2147792 | MsG0580024217.01.T01:CDS |
| GTGAGTTGGTAATCGGCGCC+AGG | 0.512228 | 5:-2148363 | None:intergenic |
| ATGGAGAACAACGGTTTCAA+TGG | 0.514382 | 5:-2149084 | None:intergenic |
| CCAGTCAAGGCCTTCTCCTG+TGG | 0.516037 | 5:-2149030 | None:intergenic |
| CACAGGAGAAGGCCTTGACT+GGG | 0.517127 | 5:+2149031 | MsG0580024217.01.T01:CDS |
| CATTGATAAAGCATTGGTTG+AGG | 0.521385 | 5:+2148785 | MsG0580024217.01.T01:CDS |
| TCCAAGTGTATGTGAATACA+TGG | 0.525305 | 5:+2148191 | MsG0580024217.01.T01:CDS |
| GGACAAGCACTCTTTGGAGA+TGG | 0.536691 | 5:+2148582 | MsG0580024217.01.T01:CDS |
| AGGAAAGGAGGCTGCAGTGA+AGG | 0.539707 | 5:+2148266 | MsG0580024217.01.T01:CDS |
| TTCACGGAGATGACCATCAA+TGG | 0.540133 | 5:-2148709 | None:intergenic |
| GCCATGTATTCACATACACT+TGG | 0.545736 | 5:-2148192 | None:intergenic |
| AGAAGGCCCTGCAACCATCA+TGG | 0.546762 | 5:+2147825 | MsG0580024217.01.T01:CDS |
| ATCTTCTGGATTGCTCACCC+AGG | 0.549136 | 5:+2148843 | MsG0580024217.01.T01:CDS |
| TCCCAGGAACATCTTTAAGA+AGG | 0.550142 | 5:-2148749 | None:intergenic |
| GGACTTAAAACCACAGGAGA+AGG | 0.552447 | 5:+2149020 | MsG0580024217.01.T01:CDS |
| GGCTGGATTTGCAGTGCCAA+TGG | 0.558766 | 5:-2147848 | None:intergenic |
| TCCTGCCTAGCATCCAATGA+AGG | 0.559807 | 5:-2148216 | None:intergenic |
| CTGTCCAAATGAGTATCACT+AGG | 0.561644 | 5:-2148552 | None:intergenic |
| GCAGCCTCCTTTCCTAGTCT+AGG | 0.564443 | 5:-2148258 | None:intergenic |
| CGAAAGAAATCGGCACAAGC+GGG | 0.566603 | 5:+2148999 | MsG0580024217.01.T01:CDS |
| CATTTCATATAGCCACGCTA+TGG | 0.567013 | 5:-2149103 | None:intergenic |
| TTCAACTTGATCAAGAATTG+CGG | 0.567995 | 5:-2148871 | None:intergenic |
| AGAGGTACCTAGACTAGGAA+AGG | 0.571613 | 5:+2148251 | MsG0580024217.01.T01:CDS |
| TTCACTAAGTACTTCTCTAG+TGG | 0.572078 | 5:-2148928 | None:intergenic |
| TGCTAGGCAGGACATGGTGG+TGG | 0.573568 | 5:+2148227 | MsG0580024217.01.T01:CDS |
| ACGGTTTCAATGGTAAGTCC+AGG | 0.578176 | 5:-2149074 | None:intergenic |
| CAATGGCCATGATGGTTGCA+GGG | 0.578454 | 5:-2147831 | None:intergenic |
| CTATGTAGCAATGATATGGT+AGG | 0.582904 | 5:-2147751 | None:intergenic |
| GTGATAAATCCATGATCAAG+AGG | 0.584564 | 5:+2148130 | MsG0580024217.01.T01:CDS |
| ATTGGATGCTAGGCAGGACA+TGG | 0.585693 | 5:+2148221 | MsG0580024217.01.T01:CDS |
| CAAGAATTGCGGGTCCACCT+GGG | 0.591037 | 5:-2148860 | None:intergenic |
| CGTCAGGCTCAAAGGGCAGA+AGG | 0.594346 | 5:+2147808 | MsG0580024217.01.T01:CDS |
| GAAATGTTAGACCAGCTTCA+CGG | 0.597537 | 5:-2148725 | None:intergenic |
| GTAGCAATGATATGGTAGGT+TGG | 0.598357 | 5:-2147747 | None:intergenic |
| ACAAGTGGTGTAGACATGCC+TGG | 0.600112 | 5:+2148345 | MsG0580024217.01.T01:CDS |
| AGGCATGTCTACACCACTTG+TGG | 0.602236 | 5:-2148343 | None:intergenic |
| TTCTGGATTGCTCACCCAGG+TGG | 0.608006 | 5:+2148846 | MsG0580024217.01.T01:CDS |
| CAATAAAGGTGCTCGTGTGT+TGG | 0.608320 | 5:+2148491 | MsG0580024217.01.T01:CDS |
| TGTGCTTTGTTCAACACAGT+TGG | 0.612931 | 5:-2147869 | None:intergenic |
| AACCGTTGTTCTCCATAGCG+TGG | 0.616131 | 5:+2149091 | MsG0580024217.01.T01:CDS |
| ACATAGAAACTATATCAAGA+TGG | 0.616456 | 5:+2147768 | MsG0580024217.01.T01:exon |
| AATACAGAGTTCATGTACCA+TGG | 0.618762 | 5:+2149186 | MsG0580024217.01.T01:three_prime_UTR |
| AAGGCTGAAGAGTGTTGTGG+TGG | 0.625182 | 5:-2147671 | None:intergenic |
| CAAGCGGGACTTAAAACCAC+AGG | 0.631621 | 5:+2149014 | MsG0580024217.01.T01:CDS |
| GTGGTAGAGGTACCTAGACT+AGG | 0.632093 | 5:+2148246 | MsG0580024217.01.T01:CDS |
| CAAACAACACACCCCAGTCA+AGG | 0.632254 | 5:-2149043 | None:intergenic |
| AATGAGTATCACTAGGACCA+CGG | 0.635157 | 5:-2148545 | None:intergenic |
| AACAATTGCTCCAGACAGTG+AGG | 0.638797 | 5:+2148683 | MsG0580024217.01.T01:CDS |
| GGTACCTAGACTAGGAAAGG+AGG | 0.643500 | 5:+2148254 | MsG0580024217.01.T01:CDS |
| GTTACTGCTGTGACATTCCG+TGG | 0.652143 | 5:+2148528 | MsG0580024217.01.T01:CDS |
| ACAATTGCTCCAGACAGTGA+GGG | 0.658063 | 5:+2148684 | MsG0580024217.01.T01:CDS |
| GTGAAGGCCATAAAAGAATG+GGG | 0.663419 | 5:+2148282 | MsG0580024217.01.T01:CDS |
| GGATGCTAGGCAGGACATGG+TGG | 0.681727 | 5:+2148224 | MsG0580024217.01.T01:CDS |
| AGGTATATGATGTACCAACA+AGG | 0.699849 | 5:+2148417 | MsG0580024217.01.T01:CDS |
| GAAAAGGCTGAAGAGTGTTG+TGG | 0.707518 | 5:-2147674 | None:intergenic |
| ACAGGAGAAGGCCTTGACTG+GGG | 0.709796 | 5:+2149032 | MsG0580024217.01.T01:CDS |
| AGCCACGCTATGGAGAACAA+CGG | 0.751325 | 5:-2149093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTAGTACAATAATTTTT+GGG | - | Chr5:2148090-2148109 | None:intergenic | 15.0% |
| !!! | TACATTAGTACAATAATTTT+TGG | - | Chr5:2148091-2148110 | None:intergenic | 15.0% |
| !! | AAAAAACATTGATAAAGCAT+TGG | + | Chr5:2148779-2148798 | MsG0580024217.01.T01:CDS | 20.0% |
| !! | TTATAATCAGAGATGTTTAA+TGG | - | Chr5:2148819-2148838 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTCAAAATCTCTT+CGG | - | Chr5:2148172-2148191 | None:intergenic | 20.0% |
| ! | AATATAGGTTTCTCAATTTC+TGG | - | Chr5:2148642-2148661 | None:intergenic | 25.0% |
| ! | ACATAGAAACTATATCAAGA+TGG | + | Chr5:2147768-2147787 | MsG0580024217.01.T01:exon | 25.0% |
| ! | ACTCTGTATTTATTCTTACA+TGG | - | Chr5:2149176-2149195 | None:intergenic | 25.0% |
| ! | ATACCTTGAAACAATTTGAT+AGG | - | Chr5:2148024-2148043 | None:intergenic | 25.0% |
| ! | CTGATTATAATTCAATCTTC+TGG | + | Chr5:2148829-2148848 | MsG0580024217.01.T01:CDS | 25.0% |
| ! | GTAATTTCTTTAACTACTTC+AGG | + | Chr5:2148108-2148127 | MsG0580024217.01.T01:intron | 25.0% |
| ! | TACCTTGAAACAATTTGATA+GGG | - | Chr5:2148023-2148042 | None:intergenic | 25.0% |
| ! | TCAAATGAAAGTAAACTCTA+TGG | - | Chr5:2147725-2147744 | None:intergenic | 25.0% |
| !!! | AAGTGTGTAATCTTTGATTT+TGG | - | Chr5:2148312-2148331 | None:intergenic | 25.0% |
| !!! | TATATTCGTTTTAACATCCA+TGG | - | Chr5:2149206-2149225 | None:intergenic | 25.0% |
| AAAACCAATCACATGATAGT+AGG | - | Chr5:2148060-2148079 | None:intergenic | 30.0% | |
| AATCAGAGATGTTTAATGGT+TGG | - | Chr5:2148815-2148834 | None:intergenic | 30.0% | |
| ACAGTACTTAGTTGTAGAAA+AGG | - | Chr5:2147699-2147718 | None:intergenic | 30.0% | |
| CTTAGTTGTAGAAAAGGAAA+AGG | - | Chr5:2147693-2147712 | None:intergenic | 30.0% | |
| GAAAAAGAAGAAGCTACAAA+TGG | - | Chr5:2149229-2149248 | None:intergenic | 30.0% | |
| GTTTCTATGTAGCAATGATA+TGG | - | Chr5:2147758-2147777 | None:intergenic | 30.0% | |
| TGAGAAACCTATATTTGAGA+TGG | + | Chr5:2148647-2148666 | MsG0580024217.01.T01:CDS | 30.0% | |
| TTCAACTTGATCAAGAATTG+CGG | - | Chr5:2148874-2148893 | None:intergenic | 30.0% | |
| TTCCCTATCAAATTGTTTCA+AGG | + | Chr5:2148018-2148037 | MsG0580024217.01.T01:intron | 30.0% | |
| ! | AACCTATATTTGAGATGGTT+TGG | + | Chr5:2148652-2148671 | MsG0580024217.01.T01:CDS | 30.0% |
| ! | ATCATATACCTTTTCACGTA+TGG | - | Chr5:2148408-2148427 | None:intergenic | 30.0% |
| ! | TCATATACCTTTTCACGTAT+GGG | - | Chr5:2148407-2148426 | None:intergenic | 30.0% |
| !! | AGAGAAGTACTTAGTGAATA+TGG | + | Chr5:2148933-2148952 | MsG0580024217.01.T01:CDS | 30.0% |
| !! | GATCAAGTTGAACAAAAGTT+AGG | + | Chr5:2148882-2148901 | MsG0580024217.01.T01:CDS | 30.0% |
| !! | GTTTCTCAATTTCTGGTATT+GGG | - | Chr5:2148635-2148654 | None:intergenic | 30.0% |
| !!! | ATGTTTTTTGAAACAATCCC+AGG | - | Chr5:2148768-2148787 | None:intergenic | 30.0% |
| !!! | GTGATTTTGAAGTAGAAATC+AGG | - | Chr5:2147898-2147917 | None:intergenic | 30.0% |
| !!! | TACTATCATGTGATTGGTTT+TGG | + | Chr5:2148059-2148078 | MsG0580024217.01.T01:intron | 30.0% |
| AAGACCTACTATCATGTGAT+TGG | + | Chr5:2148053-2148072 | MsG0580024217.01.T01:intron | 35.0% | |
| AATACAGAGTTCATGTACCA+TGG | + | Chr5:2149186-2149205 | MsG0580024217.01.T01:three_prime_UTR | 35.0% | |
| ACCTTCTTAAAGATGTTCCT+GGG | + | Chr5:2148748-2148767 | MsG0580024217.01.T01:CDS | 35.0% | |
| AGATGAGATGCGAAAGAAAT+CGG | + | Chr5:2148989-2149008 | MsG0580024217.01.T01:CDS | 35.0% | |
| AGGTATATGATGTACCAACA+AGG | + | Chr5:2148417-2148436 | MsG0580024217.01.T01:CDS | 35.0% | |
| AGTGAAGGCCATAAAAGAAT+GGG | + | Chr5:2148281-2148300 | MsG0580024217.01.T01:CDS | 35.0% | |
| CTATGTAGCAATGATATGGT+AGG | - | Chr5:2147754-2147773 | None:intergenic | 35.0% | |
| GTCCAAACCATCTCAAATAT+AGG | - | Chr5:2148657-2148676 | None:intergenic | 35.0% | |
| GTGATAAATCCATGATCAAG+AGG | + | Chr5:2148130-2148149 | MsG0580024217.01.T01:CDS | 35.0% | |
| TACCAACTCACAAAACTCTT+AGG | + | Chr5:2148375-2148394 | MsG0580024217.01.T01:CDS | 35.0% | |
| TCAACTTGATCAAGAATTGC+GGG | - | Chr5:2148873-2148892 | None:intergenic | 35.0% | |
| TCCAAGTGTATGTGAATACA+TGG | + | Chr5:2148191-2148210 | MsG0580024217.01.T01:CDS | 35.0% | |
| TTCACTAAGTACTTCTCTAG+TGG | - | Chr5:2148931-2148950 | None:intergenic | 35.0% | |
| !! | CATTGATAAAGCATTGGTTG+AGG | + | Chr5:2148785-2148804 | MsG0580024217.01.T01:CDS | 35.0% |
| !! | GGTTTCTCAATTTCTGGTAT+TGG | - | Chr5:2148636-2148655 | None:intergenic | 35.0% |
| !! | GTGTAATCTTTGATTTTGGC+TGG | - | Chr5:2148308-2148327 | None:intergenic | 35.0% |
| !!! | GAGTTTTGTGAGTTGGTAAT+CGG | - | Chr5:2148373-2148392 | None:intergenic | 35.0% |
| AATGAGTATCACTAGGACCA+CGG | - | Chr5:2148548-2148567 | None:intergenic | 40.0% | |
| ATGGAGAACAACGGTTTCAA+TGG | - | Chr5:2149087-2149106 | None:intergenic | 40.0% | |
| CACCTTCTTAAAGATGTTCC+TGG | + | Chr5:2148747-2148766 | MsG0580024217.01.T01:CDS | 40.0% | |
| CAGTGAAGGCCATAAAAGAA+TGG | + | Chr5:2148280-2148299 | MsG0580024217.01.T01:CDS | 40.0% | |
| CATGTATCTCCTCTTGATCA+TGG | - | Chr5:2148142-2148161 | None:intergenic | 40.0% | |
| CATTTCATATAGCCACGCTA+TGG | - | Chr5:2149106-2149125 | None:intergenic | 40.0% | |
| CTGTCCAAATGAGTATCACT+AGG | - | Chr5:2148555-2148574 | None:intergenic | 40.0% | |
| GAAATGTTAGACCAGCTTCA+CGG | - | Chr5:2148728-2148747 | None:intergenic | 40.0% | |
| GACTTGGCTGAGAACAATAA+AGG | + | Chr5:2148477-2148496 | MsG0580024217.01.T01:CDS | 40.0% | |
| GCCATGTATTCACATACACT+TGG | - | Chr5:2148195-2148214 | None:intergenic | 40.0% | |
| GTAGCAATGATATGGTAGGT+TGG | - | Chr5:2147750-2147769 | None:intergenic | 40.0% | |
| GTGAAGGCCATAAAAGAATG+GGG | + | Chr5:2148282-2148301 | MsG0580024217.01.T01:CDS | 40.0% | |
| TGAAATTCGTCAGGCTCAAA+GGG | + | Chr5:2147801-2147820 | MsG0580024217.01.T01:CDS | 40.0% | |
| TGAATACATGGCACCTTCAT+TGG | + | Chr5:2148203-2148222 | MsG0580024217.01.T01:CDS | 40.0% | |
| TGGTCCTAGTGATACTCATT+TGG | + | Chr5:2148548-2148567 | MsG0580024217.01.T01:CDS | 40.0% | |
| ! | AACAAGGATGTTTTGCAGGT+GGG | + | Chr5:2148433-2148452 | MsG0580024217.01.T01:CDS | 40.0% |
| ! | ACTCATTTGGACAGTCTTGT+TGG | + | Chr5:2148561-2148580 | MsG0580024217.01.T01:CDS | 40.0% |
| ! | CTAGTGGCTTTCATCTTTTC+AGG | - | Chr5:2148915-2148934 | None:intergenic | 40.0% |
| ! | GAGTGTATCTGAAATTCGTC+AGG | + | Chr5:2147792-2147811 | MsG0580024217.01.T01:CDS | 40.0% |
| ! | TACCAACAAGGATGTTTTGC+AGG | + | Chr5:2148429-2148448 | MsG0580024217.01.T01:CDS | 40.0% |
| ! | TCCCAGGAACATCTTTAAGA+AGG | - | Chr5:2148752-2148771 | None:intergenic | 40.0% |
| ! | TGTGCTTTGTTCAACACAGT+TGG | - | Chr5:2147872-2147891 | None:intergenic | 40.0% |
| ! | TTGATCTTTTGCACCACAAG+TGG | + | Chr5:2148330-2148349 | MsG0580024217.01.T01:CDS | 40.0% |
| !! | GACCTAAGAGTTTTGTGAGT+TGG | - | Chr5:2148380-2148399 | None:intergenic | 40.0% |
| AACAATTGCTCCAGACAGTG+AGG | + | Chr5:2148683-2148702 | MsG0580024217.01.T01:CDS | 45.0% | |
| ACAATTGCTCCAGACAGTGA+GGG | + | Chr5:2148684-2148703 | MsG0580024217.01.T01:CDS | 45.0% | |
| ACGGTTTCAATGGTAAGTCC+AGG | - | Chr5:2149077-2149096 | None:intergenic | 45.0% | |
| ATTGTTCTCAGCCAAGTCCT+TGG | - | Chr5:2148475-2148494 | None:intergenic | 45.0% | |
| CACCTGCAAAACATCCTTGT+TGG | - | Chr5:2148434-2148453 | None:intergenic | 45.0% | |
| CTGAAATTCGTCAGGCTCAA+AGG | + | Chr5:2147800-2147819 | MsG0580024217.01.T01:CDS | 45.0% | |
| CTTGTTGGACAAGCACTCTT+TGG | + | Chr5:2148576-2148595 | MsG0580024217.01.T01:CDS | 45.0% | |
| CTTTGTTCAACACAGTTGGC+TGG | - | Chr5:2147868-2147887 | None:intergenic | 45.0% | |
| GGACTTAAAACCACAGGAGA+AGG | + | Chr5:2149020-2149039 | MsG0580024217.01.T01:CDS | 45.0% | |
| TTCACGGAGATGACCATCAA+TGG | - | Chr5:2148712-2148731 | None:intergenic | 45.0% | |
| ! | CAACAAGGATGTTTTGCAGG+TGG | + | Chr5:2148432-2148451 | MsG0580024217.01.T01:CDS | 45.0% |
| !! | AGAGGTACCTAGACTAGGAA+AGG | + | Chr5:2148251-2148270 | MsG0580024217.01.T01:CDS | 45.0% |
| !! | CAATAAAGGTGCTCGTGTGT+TGG | + | Chr5:2148491-2148510 | MsG0580024217.01.T01:CDS | 45.0% |
| !! | GAAAAGGCTGAAGAGTGTTG+TGG | - | Chr5:2147677-2147696 | None:intergenic | 45.0% |
| AACCGTTGTTCTCCATAGCG+TGG | + | Chr5:2149091-2149110 | MsG0580024217.01.T01:CDS | 50.0% | |
| ACAAGTGGTGTAGACATGCC+TGG | + | Chr5:2148345-2148364 | MsG0580024217.01.T01:CDS | 50.0% | |
| ACCTTCATTGGATGCTAGGC+AGG | + | Chr5:2148215-2148234 | MsG0580024217.01.T01:CDS | 50.0% | |
| AGCCACGCTATGGAGAACAA+CGG | - | Chr5:2149096-2149115 | None:intergenic | 50.0% | |
| AGGCATGTCTACACCACTTG+TGG | - | Chr5:2148346-2148365 | None:intergenic | 50.0% | |
| ATCTTCTGGATTGCTCACCC+AGG | + | Chr5:2148843-2148862 | MsG0580024217.01.T01:CDS | 50.0% | |
| ATTGGATGCTAGGCAGGACA+TGG | + | Chr5:2148221-2148240 | MsG0580024217.01.T01:CDS | 50.0% | |
| CAAACAACACACCCCAGTCA+AGG | - | Chr5:2149046-2149065 | None:intergenic | 50.0% | |
| CAAGCGGGACTTAAAACCAC+AGG | + | Chr5:2149014-2149033 | MsG0580024217.01.T01:CDS | 50.0% | |
| CAATGGCCATGATGGTTGCA+GGG | - | Chr5:2147834-2147853 | None:intergenic | 50.0% | |
| CGAAAGAAATCGGCACAAGC+GGG | + | Chr5:2148999-2149018 | MsG0580024217.01.T01:CDS | 50.0% | |
| GCGAAAGAAATCGGCACAAG+CGG | + | Chr5:2148998-2149017 | MsG0580024217.01.T01:CDS | 50.0% | |
| GGTACCTAGACTAGGAAAGG+AGG | + | Chr5:2148254-2148273 | MsG0580024217.01.T01:CDS | 50.0% | |
| GTCTTCGCCCATACGTGAAA+AGG | + | Chr5:2148397-2148416 | MsG0580024217.01.T01:CDS | 50.0% | |
| GTTACTGCTGTGACATTCCG+TGG | + | Chr5:2148528-2148547 | MsG0580024217.01.T01:CDS | 50.0% | |
| TCCTGCCTAGCATCCAATGA+AGG | - | Chr5:2148219-2148238 | None:intergenic | 50.0% | |
| TGGCACCTTCATTGGATGCT+AGG | + | Chr5:2148211-2148230 | MsG0580024217.01.T01:CDS | 50.0% | |
| ! | AGGATGTTTTGCAGGTGGGA+CGG | + | Chr5:2148437-2148456 | MsG0580024217.01.T01:CDS | 50.0% |
| ! | CTTGACTGGGGTGTGTTGTT+TGG | + | Chr5:2149044-2149063 | MsG0580024217.01.T01:CDS | 50.0% |
| ! | GGACAAGCACTCTTTGGAGA+TGG | + | Chr5:2148582-2148601 | MsG0580024217.01.T01:CDS | 50.0% |
| !! | GTGGTAGAGGTACCTAGACT+AGG | + | Chr5:2148246-2148265 | MsG0580024217.01.T01:CDS | 50.0% |
| !! | TGGCTGGCCCCATTCTTTTA+TGG | - | Chr5:2148292-2148311 | None:intergenic | 50.0% |
| !! | TGGGGTGTGTTGTTTGGCTT+CGG | + | Chr5:2149050-2149069 | MsG0580024217.01.T01:CDS | 50.0% |
| ACAGGAGAAGGCCTTGACTG+GGG | + | Chr5:2149032-2149051 | MsG0580024217.01.T01:CDS | 55.0% | |
| AGAAGGCCCTGCAACCATCA+TGG | + | Chr5:2147825-2147844 | MsG0580024217.01.T01:CDS | 55.0% | |
| AGGAAAGGAGGCTGCAGTGA+AGG | + | Chr5:2148266-2148285 | MsG0580024217.01.T01:CDS | 55.0% | |
| CAAGAATTGCGGGTCCACCT+GGG | - | Chr5:2148863-2148882 | None:intergenic | 55.0% | |
| CACAGGAGAAGGCCTTGACT+GGG | + | Chr5:2149031-2149050 | MsG0580024217.01.T01:CDS | 55.0% | |
| CCAATGGCCATGATGGTTGC+AGG | - | Chr5:2147835-2147854 | None:intergenic | 55.0% | |
| CCTGCAACCATCATGGCCAT+TGG | + | Chr5:2147832-2147851 | MsG0580024217.01.T01:CDS | 55.0% | |
| GACAGTGAGGGAGCCATTGA+TGG | + | Chr5:2148696-2148715 | MsG0580024217.01.T01:CDS | 55.0% | |
| GATGGTCATCTCCGTGAAGC+TGG | + | Chr5:2148714-2148733 | MsG0580024217.01.T01:CDS | 55.0% | |
| GCAGCCTCCTTTCCTAGTCT+AGG | - | Chr5:2148261-2148280 | None:intergenic | 55.0% | |
| GCTTCGTTTGGCCAAGGACT+TGG | + | Chr5:2148461-2148480 | MsG0580024217.01.T01:CDS | 55.0% | |
| GGAGCTGCTGCACTCATTGT+TGG | + | Chr5:2148603-2148622 | MsG0580024217.01.T01:CDS | 55.0% | |
| GGCTGGATTTGCAGTGCCAA+TGG | - | Chr5:2147851-2147870 | None:intergenic | 55.0% | |
| TCAAGAATTGCGGGTCCACC+TGG | - | Chr5:2148864-2148883 | None:intergenic | 55.0% | |
| TCAATGGCTCCCTCACTGTC+TGG | - | Chr5:2148696-2148715 | None:intergenic | 55.0% | |
| TGCAGTGCCAATGGCCATGA+TGG | - | Chr5:2147842-2147861 | None:intergenic | 55.0% | |
| TTCTGGATTGCTCACCCAGG+TGG | + | Chr5:2148846-2148865 | MsG0580024217.01.T01:CDS | 55.0% | |
| !! | GTGTTGTTTGGCTTCGGACC+TGG | + | Chr5:2149056-2149075 | MsG0580024217.01.T01:CDS | 55.0% |
| AGGTGGGACGGTGCTTCGTT+TGG | + | Chr5:2148449-2148468 | MsG0580024217.01.T01:CDS | 60.0% | |
| CCACAGGAGAAGGCCTTGAC+TGG | + | Chr5:2149030-2149049 | MsG0580024217.01.T01:CDS | 60.0% | |
| CCAGTCAAGGCCTTCTCCTG+TGG | - | Chr5:2149033-2149052 | None:intergenic | 60.0% | |
| CGTCAGGCTCAAAGGGCAGA+AGG | + | Chr5:2147808-2147827 | MsG0580024217.01.T01:CDS | 60.0% | |
| GACGGTGCTTCGTTTGGCCA+AGG | + | Chr5:2148455-2148474 | MsG0580024217.01.T01:CDS | 60.0% | |
| GGATGCTAGGCAGGACATGG+TGG | + | Chr5:2148224-2148243 | MsG0580024217.01.T01:CDS | 60.0% | |
| TGCTAGGCAGGACATGGTGG+TGG | + | Chr5:2148227-2148246 | MsG0580024217.01.T01:CDS | 60.0% | |
| !! | GCAGGACATGGTGGTGGTAG+AGG | + | Chr5:2148233-2148252 | MsG0580024217.01.T01:CDS | 60.0% |
| !! | GTGAGTTGGTAATCGGCGCC+AGG | - | Chr5:2148366-2148385 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 2147673 | 2149293 | 2147673 | ID=MsG0580024217.01;Name=MsG0580024217.01 |
| Chr5 | mRNA | 2147673 | 2149293 | 2147673 | ID=MsG0580024217.01.T01;Parent=MsG0580024217.01;Name=MsG0580024217.01.T01;_AED=0.44;_eAED=0.44;_QI=114|1|1|1|1|1|2|172|389 |
| Chr5 | exon | 2147673 | 2147964 | 2147673 | ID=MsG0580024217.01.T01:exon:620;Parent=MsG0580024217.01.T01 |
| Chr5 | exon | 2148130 | 2149293 | 2148130 | ID=MsG0580024217.01.T01:exon:621;Parent=MsG0580024217.01.T01 |
| Chr5 | five_prime_UTR | 2147673 | 2147786 | 2147673 | ID=MsG0580024217.01.T01:five_prime_utr;Parent=MsG0580024217.01.T01 |
| Chr5 | CDS | 2147787 | 2147964 | 2147787 | ID=MsG0580024217.01.T01:cds;Parent=MsG0580024217.01.T01 |
| Chr5 | CDS | 2148130 | 2149121 | 2148130 | ID=MsG0580024217.01.T01:cds;Parent=MsG0580024217.01.T01 |
| Chr5 | three_prime_UTR | 2149122 | 2149293 | 2149122 | ID=MsG0580024217.01.T01:three_prime_utr;Parent=MsG0580024217.01.T01 |
| Gene Sequence |
| Protein sequence |
