Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031139.01.T01 | XP_013451227.1 | 97.309 | 669 | 18 | 0 | 1 | 669 | 1 | 669 | 0 | 1328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031139.01.T01 | D4AZ24 | 27.596 | 703 | 416 | 31 | 36 | 670 | 225 | 902 | 4.83E-44 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031139.01.T01 | A0EJF0 | 97.309 | 669 | 18 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000148.01 | MsG0680031139.01 | 0.816916 | 4.320553e-52 | 3.101780e-49 |
| MsG0180003320.01 | MsG0680031139.01 | 0.803734 | 3.025769e-49 | 1.532157e-46 |
| MsG0180003604.01 | MsG0680031139.01 | 0.805006 | 1.643847e-49 | 8.600862e-47 |
| MsG0180003992.01 | MsG0680031139.01 | 0.818631 | 1.772165e-52 | 1.333570e-49 |
| MsG0180005571.01 | MsG0680031139.01 | 0.816994 | 4.150376e-52 | 2.986183e-49 |
| MsG0180005572.01 | MsG0680031139.01 | 0.809793 | 1.587307e-50 | 9.408132e-48 |
| MsG0180005648.01 | MsG0680031139.01 | 0.819363 | 1.208012e-52 | 9.275822e-50 |
| MsG0280006417.01 | MsG0680031139.01 | 0.801421 | 9.077042e-49 | 4.332965e-46 |
| MsG0280011267.01 | MsG0680031139.01 | 0.815158 | 1.067096e-51 | 7.300383e-49 |
| MsG0680031009.01 | MsG0680031139.01 | 0.800522 | 1.385802e-48 | 6.466338e-46 |
| MsG0680031139.01 | MsG0680034418.01 | 0.801807 | 7.562516e-49 | 3.645487e-46 |
| MsG0680031139.01 | MsG0680034974.01 | 0.804571 | 2.026741e-49 | 1.048568e-46 |
| MsG0680031139.01 | MsG0780036199.01 | 0.802942 | 4.414646e-49 | 2.190395e-46 |
| MsG0680031139.01 | MsG0780036427.01 | 0.803755 | 2.995573e-49 | 1.517694e-46 |
| MsG0680031139.01 | MsG0780036471.01 | 0.801839 | 7.449774e-49 | 3.594118e-46 |
| MsG0680031139.01 | MsG0780036472.01 | 0.816625 | 5.021271e-52 | 3.576208e-49 |
| MsG0680031139.01 | MsG0780036649.01 | 0.814216 | 1.724549e-51 | 1.150180e-48 |
| MsG0680031139.01 | MsG0780036839.01 | 0.823074 | 1.684193e-53 | 1.435439e-50 |
| MsG0680031139.01 | MsG0780039237.01 | 0.801574 | 8.443698e-49 | 4.046279e-46 |
| MsG0680031139.01 | MsG0780040497.01 | 0.840043 | 1.102514e-57 | 1.551604e-54 |
| MsG0680031139.01 | MsG0780040806.01 | 0.807149 | 5.818917e-50 | 3.216755e-47 |
| MsG0680031139.01 | MsG0880046961.01 | 0.802164 | 6.387281e-49 | 3.107071e-46 |
| MsG0680031139.01 | MsG0880047113.01 | 0.817930 | 2.553967e-52 | 1.885232e-49 |
| MsG0480018622.01 | MsG0680031139.01 | 0.802194 | 6.297347e-49 | 3.065531e-46 |
| MsG0480019301.01 | MsG0680031139.01 | 0.832467 | 9.299595e-56 | 1.040305e-52 |
| MsG0480020904.01 | MsG0680031139.01 | 0.804046 | 2.606553e-49 | 1.330518e-46 |
| MsG0480022055.01 | MsG0680031139.01 | 0.804522 | 2.074363e-49 | 1.071827e-46 |
| MsG0480022308.01 | MsG0680031139.01 | 0.826625 | 2.447446e-54 | 2.307493e-51 |
| MsG0480022310.01 | MsG0680031139.01 | 0.803188 | 3.927584e-49 | 1.961089e-46 |
| MsG0480023327.01 | MsG0680031139.01 | 0.800465 | 1.423041e-48 | 6.630388e-46 |
| MsG0580024087.01 | MsG0680031139.01 | 0.836756 | 7.766340e-57 | 9.881772e-54 |
| MsG0580024138.01 | MsG0680031139.01 | 0.830058 | 3.635839e-55 | 3.788617e-52 |
| MsG0580024218.01 | MsG0680031139.01 | 0.805574 | 1.250291e-49 | 6.637615e-47 |
| MsG0580024219.01 | MsG0680031139.01 | 0.807346 | 5.287554e-50 | 2.938018e-47 |
| MsG0580024408.01 | MsG0680031139.01 | 0.803227 | 3.855658e-49 | 1.927020e-46 |
| MsG0580024990.01 | MsG0680031139.01 | 0.805750 | 1.148302e-49 | 6.124412e-47 |
| MsG0580025586.01 | MsG0680031139.01 | 0.804915 | 1.717932e-49 | 8.968147e-47 |
| MsG0580026019.01 | MsG0680031139.01 | 0.818627 | 1.775828e-52 | 1.336172e-49 |
| MsG0380015369.01 | MsG0680031139.01 | 0.800576 | 1.351092e-48 | 6.313098e-46 |
| MsG0380016086.01 | MsG0680031139.01 | 0.819912 | 9.054302e-53 | 7.060533e-50 |
| MsG0380016299.01 | MsG0680031139.01 | 0.816545 | 5.233909e-52 | 3.719375e-49 |
| MsG0380016300.01 | MsG0680031139.01 | 0.810853 | 9.374200e-51 | 5.713885e-48 |
| MsG0380017168.01 | MsG0680031139.01 | 0.802488 | 5.477686e-49 | 2.686623e-46 |
| MsG0580026521.01 | MsG0680031139.01 | 0.807932 | 3.970566e-50 | 2.240070e-47 |
| MsG0580027753.01 | MsG0680031139.01 | 0.801651 | 8.142573e-49 | 3.909479e-46 |
| MsG0580029359.01 | MsG0680031139.01 | 0.800758 | 1.240437e-48 | 5.822649e-46 |
| MsG0580029764.01 | MsG0680031139.01 | 0.810512 | 1.110964e-50 | 6.709740e-48 |
| MsG0580029938.01 | MsG0680031139.01 | 0.818978 | 1.478127e-52 | 1.123209e-49 |
| MsG0580030133.01 | MsG0680031139.01 | 0.806635 | 7.475288e-50 | 4.077627e-47 |
| MsG0580030135.01 | MsG0680031139.01 | 0.817007 | 4.123078e-52 | 2.967503e-49 |
| MsG0280007909.01 | MsG0680031139.01 | 0.810859 | 9.345711e-51 | 5.697455e-48 |
| MsG0280009232.01 | MsG0680031139.01 | 0.808862 | 2.514435e-50 | 1.453713e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031139.01.T01 | MTR_6g016820 | 97.309 | 669 | 18 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1328 |
| MsG0680031139.01.T01 | MTR_6g016800 | 78.464 | 664 | 141 | 2 | 7 | 670 | 6 | 667 | 0.0 | 1029 |
| MsG0680031139.01.T01 | MTR_6g016795 | 77.037 | 675 | 150 | 4 | 1 | 674 | 1 | 671 | 0.0 | 1018 |
| MsG0680031139.01.T01 | MTR_6g016785 | 70.615 | 667 | 194 | 2 | 8 | 674 | 71 | 735 | 0.0 | 994 |
| MsG0680031139.01.T01 | MTR_6g016840 | 74.118 | 680 | 169 | 4 | 1 | 674 | 1 | 679 | 0.0 | 981 |
| MsG0680031139.01.T01 | MTR_6g016790 | 67.634 | 655 | 203 | 5 | 17 | 668 | 11 | 659 | 0.0 | 877 |
| MsG0680031139.01.T01 | MTR_7g013170 | 65.244 | 656 | 221 | 6 | 15 | 668 | 13 | 663 | 0.0 | 873 |
| MsG0680031139.01.T01 | MTR_6g016845 | 68.601 | 672 | 201 | 6 | 1 | 668 | 13 | 678 | 0.0 | 872 |
| MsG0680031139.01.T01 | MTR_6g016810 | 66.566 | 661 | 212 | 5 | 11 | 668 | 5 | 659 | 0.0 | 859 |
| MsG0680031139.01.T01 | MTR_7g013810 | 64.545 | 660 | 227 | 6 | 11 | 668 | 6 | 660 | 0.0 | 845 |
| MsG0680031139.01.T01 | MTR_7g028445 | 63.914 | 654 | 189 | 7 | 1 | 650 | 1 | 611 | 0.0 | 764 |
| MsG0680031139.01.T01 | MTR_4g036905 | 63.914 | 654 | 189 | 7 | 1 | 650 | 1 | 611 | 0.0 | 764 |
| MsG0680031139.01.T01 | MTR_6g016860 | 73.062 | 516 | 134 | 4 | 127 | 639 | 1 | 514 | 0.0 | 756 |
| MsG0680031139.01.T01 | MTR_6g016855 | 72.032 | 379 | 91 | 4 | 293 | 670 | 2 | 366 | 0.0 | 535 |
| MsG0680031139.01.T01 | MTR_1g079270 | 59.633 | 327 | 125 | 5 | 230 | 553 | 46 | 368 | 2.19e-127 | 382 |
| MsG0680031139.01.T01 | MTR_6g037090 | 63.816 | 304 | 78 | 3 | 132 | 435 | 39 | 310 | 1.63e-125 | 374 |
| MsG0680031139.01.T01 | MTR_1g079320 | 46.939 | 343 | 93 | 8 | 355 | 662 | 2 | 290 | 4.98e-85 | 269 |
| MsG0680031139.01.T01 | MTR_7g112730 | 51.681 | 238 | 75 | 5 | 418 | 655 | 90 | 287 | 3.50e-70 | 230 |
| MsG0680031139.01.T01 | MTR_6g007703 | 51.852 | 162 | 34 | 4 | 426 | 543 | 4 | 165 | 2.38e-40 | 145 |
| MsG0680031139.01.T01 | MTR_6g007717 | 72.222 | 90 | 24 | 1 | 272 | 361 | 20 | 108 | 2.46e-29 | 115 |
| MsG0680031139.01.T01 | MTR_6g007717 | 55.682 | 88 | 25 | 3 | 543 | 630 | 123 | 196 | 8.17e-21 | 91.3 |
| MsG0680031139.01.T01 | MTR_6g007713 | 52.212 | 113 | 28 | 3 | 472 | 584 | 3 | 89 | 7.76e-29 | 110 |
| MsG0680031139.01.T01 | MTR_6g007700 | 73.770 | 61 | 14 | 2 | 293 | 353 | 6 | 64 | 1.20e-19 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031139.01.T01 | AT5G15870 | 63.922 | 668 | 231 | 6 | 6 | 668 | 50 | 712 | 0.0 | 862 |
| MsG0680031139.01.T01 | AT1G18310 | 59.680 | 687 | 208 | 9 | 8 | 668 | 5 | 648 | 0.0 | 798 |
Find 140 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATTTGGAGAGAAGAATT+TGG | 0.194168 | 6:+15032701 | None:intergenic |
| GATTTCTATATGATAGAAAA+TGG | 0.209778 | 6:-15031603 | MsG0680031139.01.T01:CDS |
| CTCAGTTTCTTTCTTGTTAG+AGG | 0.219841 | 6:-15032396 | MsG0680031139.01.T01:CDS |
| ATACTATGCTGCAGCATTAA+TGG | 0.253847 | 6:-15031260 | MsG0680031139.01.T01:CDS |
| GAAAACAAATCTTCAGAAAT+AGG | 0.267404 | 6:+15030998 | None:intergenic |
| CTAACATCATTGGAAATTCT+TGG | 0.270373 | 6:-15031193 | MsG0680031139.01.T01:CDS |
| TTTAACATGCCACCACATTT+TGG | 0.273774 | 6:+15031168 | None:intergenic |
| GAGAAGAATTTGGAGGGGTC+AGG | 0.286843 | 6:+15032711 | None:intergenic |
| CATTGTTGAGAACAAAGTTT+TGG | 0.299349 | 6:+15032646 | None:intergenic |
| TACAAAAGAGAATAGAATAG+TGG | 0.312247 | 6:-15031116 | MsG0680031139.01.T01:CDS |
| AACTTATACTCAACACAAAA+TGG | 0.314989 | 6:+15032063 | None:intergenic |
| TCGGTGTTGTTGGTGATTCA+TGG | 0.319395 | 6:-15031912 | MsG0680031139.01.T01:CDS |
| GATTCTCAACTTGTGTCTAT+TGG | 0.324540 | 6:-15031223 | MsG0680031139.01.T01:CDS |
| GGACATTGCCTGCTTTGAAT+AGG | 0.335409 | 6:-15030943 | MsG0680031139.01.T01:CDS |
| TTCAAGTATAAAAGCATTGA+TGG | 0.338458 | 6:-15031943 | MsG0680031139.01.T01:CDS |
| ACCATTGAGCCTTGGCTTGA+TGG | 0.341713 | 6:-15031643 | MsG0680031139.01.T01:CDS |
| GGTGGTGGTGATTTCGGTTT+CGG | 0.356411 | 6:-15031547 | MsG0680031139.01.T01:CDS |
| GACATTGCCTGCTTTGAATA+GGG | 0.360759 | 6:-15030942 | MsG0680031139.01.T01:CDS |
| AGGGGTGTGGATAGTAGATT+TGG | 0.376822 | 6:+15032687 | None:intergenic |
| AATGATGGTGGTGGTGATTT+CGG | 0.387295 | 6:-15031553 | MsG0680031139.01.T01:CDS |
| AATACCAAACAAAGTTCTAA+TGG | 0.387997 | 6:-15032480 | MsG0680031139.01.T01:CDS |
| TACTATGCTGCAGCATTAAT+GGG | 0.389184 | 6:-15031259 | MsG0680031139.01.T01:CDS |
| AGGTAAGGATGAAAGTATTC+AGG | 0.390251 | 6:+15032615 | None:intergenic |
| TTTGGAAGAAAGAGTTTGTA+GGG | 0.394302 | 6:+15032664 | None:intergenic |
| GAAGGGATTCTTGTATTCAT+TGG | 0.394479 | 6:-15030897 | MsG0680031139.01.T01:CDS |
| AAAATCTTCCACAAGTGAAT+AGG | 0.404198 | 6:+15031423 | None:intergenic |
| ATTTCTATATGATAGAAAAT+GGG | 0.409571 | 6:-15031602 | MsG0680031139.01.T01:CDS |
| AGAAGAATTTGGAGGGGTCA+GGG | 0.410656 | 6:+15032712 | None:intergenic |
| GAGTGCCAAGTCATTGAAAC+AGG | 0.416481 | 6:+15031874 | None:intergenic |
| GGTGACCTTGTCGGTGTTGT+TGG | 0.417541 | 6:-15031922 | MsG0680031139.01.T01:CDS |
| TCACTTTCTAAAGATGTTGA+AGG | 0.419561 | 6:-15031808 | MsG0680031139.01.T01:CDS |
| ACTCAAATTATACGCGTTTG+AGG | 0.423469 | 6:-15031378 | MsG0680031139.01.T01:CDS |
| AGTTTAGCATTACCTGCTAA+AGG | 0.424367 | 6:+15032093 | None:intergenic |
| AACAAGAAAGAAACTGAGAT+TGG | 0.428185 | 6:+15032401 | None:intergenic |
| TGGAATAATAAAAGAGATAG+TGG | 0.435268 | 6:-15031085 | MsG0680031139.01.T01:CDS |
| ATAAAAGAGATAGTGGACTT+TGG | 0.435741 | 6:-15031078 | MsG0680031139.01.T01:CDS |
| GTTGAAACTTGAACCTGGTA+AGG | 0.436802 | 6:+15032283 | None:intergenic |
| ATCTTTACAAGTTGCATTCG+TGG | 0.436977 | 6:-15031348 | MsG0680031139.01.T01:CDS |
| GTAAAATGACTCAACTTGAT+TGG | 0.437029 | 6:+15032222 | None:intergenic |
| TACAAGTTGCATTCGTGGGC+CGG | 0.443232 | 6:-15031343 | MsG0680031139.01.T01:CDS |
| AATGGCATGAATGGTGGAAA+TGG | 0.445762 | 6:+15032329 | None:intergenic |
| AGAAACTGAGATTGGAAGAA+GGG | 0.446794 | 6:+15032409 | None:intergenic |
| TGGATCAACACTAACATCAT+TGG | 0.447459 | 6:-15031203 | MsG0680031139.01.T01:CDS |
| AAGAAGATAAGAAGTTTGAA+TGG | 0.450385 | 6:-15030845 | MsG0680031139.01.T01:CDS |
| ATTGGAAGAAGGGATATCTA+AGG | 0.455502 | 6:+15032419 | None:intergenic |
| CAGAACCTGTTTCAATGACT+TGG | 0.456126 | 6:-15031879 | MsG0680031139.01.T01:CDS |
| CTTCAAATAGCTCCCTTACC+AGG | 0.456898 | 6:-15032296 | MsG0680031139.01.T01:CDS |
| TTTGGTTTGCACCTGCTGAA+TGG | 0.456939 | 6:-15031060 | MsG0680031139.01.T01:CDS |
| TTTGGAGAGAAGAATTTGGA+GGG | 0.459447 | 6:+15032705 | None:intergenic |
| GTTTAGCATTACCTGCTAAA+GGG | 0.460474 | 6:+15032094 | None:intergenic |
| AAGAAACTGAGATTGGAAGA+AGG | 0.461405 | 6:+15032408 | None:intergenic |
| CAGAATTCGAAGAGCGAGTA+GGG | 0.473311 | 6:+15032556 | None:intergenic |
| ATCATGGGGTAGGAAGTATA+AGG | 0.474490 | 6:-15031452 | MsG0680031139.01.T01:CDS |
| AGTTCTTGTCACCCTTTAGC+AGG | 0.477806 | 6:-15032105 | MsG0680031139.01.T01:CDS |
| CAAAACTTTGTTCTCAACAA+TGG | 0.478790 | 6:-15032645 | MsG0680031139.01.T01:CDS |
| GAAAGAAGTAATGGCATGAA+TGG | 0.484315 | 6:+15032320 | None:intergenic |
| GTGGAAATGGAAAGAGGGGT+TGG | 0.484442 | 6:+15032342 | None:intergenic |
| TCCATCAAGCCAAGGCTCAA+TGG | 0.485829 | 6:+15031642 | None:intergenic |
| ATTCTGCTGATTAGAAGTTA+TGG | 0.488964 | 6:+15032500 | None:intergenic |
| AATTCGGATTGCTTTGCTAC+CGG | 0.490902 | 6:-15032166 | MsG0680031139.01.T01:CDS |
| AATCCGAATTATGCCGGAAA+AGG | 0.494804 | 6:+15032179 | None:intergenic |
| ATTTGGAGAGAAGAATTTGG+AGG | 0.497207 | 6:+15032704 | None:intergenic |
| AGAGTTTGTAGGGAGGGGTG+TGG | 0.501125 | 6:+15032674 | None:intergenic |
| TGAAGGAAACCATTGAGCCT+TGG | 0.502582 | 6:-15031651 | MsG0680031139.01.T01:CDS |
| CTAGCTTCTCTCCATTCAGC+AGG | 0.502698 | 6:+15031049 | None:intergenic |
| TTGAATAGGGAAGGTGGTGT+TGG | 0.503484 | 6:-15030929 | MsG0680031139.01.T01:CDS |
| AAGGTGGTGTTGGAGAAGGA+TGG | 0.504399 | 6:-15030919 | MsG0680031139.01.T01:CDS |
| TCTTTACAAGTTGCATTCGT+GGG | 0.505312 | 6:-15031347 | MsG0680031139.01.T01:CDS |
| TTTGATGATTTGATGAGGTA+AGG | 0.505364 | 6:+15032600 | None:intergenic |
| TGAGATCATTGTGGAAAACT+TGG | 0.505916 | 6:+15032523 | None:intergenic |
| ACAAAAGAGAATAGAATAGT+GGG | 0.506836 | 6:-15031115 | MsG0680031139.01.T01:CDS |
| TTGTAAAGATCGATCCATCA+TGG | 0.508510 | 6:-15031468 | MsG0680031139.01.T01:CDS |
| GACAGAAGTTGAAGATGAAG+AGG | 0.508573 | 6:+15032000 | None:intergenic |
| AAGAAAGAGTTTGTAGGGAG+GGG | 0.509342 | 6:+15032669 | None:intergenic |
| AGGGAAGGTGGTGTTGGAGA+AGG | 0.509453 | 6:-15030923 | MsG0680031139.01.T01:CDS |
| GAAGAAAGAGTTTGTAGGGA+GGG | 0.511194 | 6:+15032668 | None:intergenic |
| GCATTAATGGGAATGGCATA+TGG | 0.518237 | 6:-15031247 | MsG0680031139.01.T01:CDS |
| AGGAATTCAGCTTATACCAT+TGG | 0.521712 | 6:-15031023 | MsG0680031139.01.T01:CDS |
| TGGTGTTGGAGAAGGATGGA+AGG | 0.530678 | 6:-15030915 | MsG0680031139.01.T01:CDS |
| GGATTCTTGTATTCATTGGA+AGG | 0.531934 | 6:-15030893 | MsG0680031139.01.T01:CDS |
| TGATTATGTTAAAGATCTTG+TGG | 0.532504 | 6:-15030969 | MsG0680031139.01.T01:CDS |
| TGCTGCAGCATTAATGGGAA+TGG | 0.532676 | 6:-15031254 | MsG0680031139.01.T01:CDS |
| AAGTTGCATTCGTGGGCCGG+AGG | 0.533156 | 6:-15031340 | MsG0680031139.01.T01:CDS |
| TGTAAAGATCGATCCATCAT+GGG | 0.533847 | 6:-15031467 | MsG0680031139.01.T01:CDS |
| ACAGAAGTTGAAGATGAAGA+GGG | 0.541248 | 6:+15032001 | None:intergenic |
| GCTTGCATTGATAGCTGAAG+AGG | 0.542751 | 6:-15031713 | MsG0680031139.01.T01:CDS |
| TGAAAACTCGGTTAGCCCTC+CGG | 0.543068 | 6:+15031324 | None:intergenic |
| GGCTCAAGCCTATTCACTTG+TGG | 0.545751 | 6:-15031431 | MsG0680031139.01.T01:CDS |
| ATTCCTTCCATCTGAAAACT+CGG | 0.546909 | 6:+15031312 | None:intergenic |
| AGAAGTAATGGCATGAATGG+TGG | 0.551604 | 6:+15032323 | None:intergenic |
| TTGAAACTTGAACCTGGTAA+GGG | 0.555681 | 6:+15032284 | None:intergenic |
| CAAAGCAATCCGAATTATGC+CGG | 0.557269 | 6:+15032173 | None:intergenic |
| GAATGGTGGAAATGGAAAGA+GGG | 0.558172 | 6:+15032337 | None:intergenic |
| ATGTTAAAGATCTTGTGGAA+TGG | 0.564246 | 6:-15030964 | MsG0680031139.01.T01:CDS |
| CTTGTTGATAGTTGAAGACA+TGG | 0.567590 | 6:+15032776 | None:intergenic |
| TTTCTATATGATAGAAAATG+GGG | 0.568239 | 6:-15031601 | MsG0680031139.01.T01:CDS |
| ACTCAACAAGGGTCTAATGA+TGG | 0.569673 | 6:-15031568 | MsG0680031139.01.T01:CDS |
| TCTTCAGAAATAGGAGCCAA+TGG | 0.570058 | 6:+15031007 | None:intergenic |
| TGAATGGTGGAAATGGAAAG+AGG | 0.575132 | 6:+15032336 | None:intergenic |
| AGTTGCATTCGTGGGCCGGA+GGG | 0.575538 | 6:-15031339 | MsG0680031139.01.T01:CDS |
| AACTTAACAATGGTCAAACA+TGG | 0.576597 | 6:-15032263 | MsG0680031139.01.T01:CDS |
| TTATACTTCCTACCCCATGA+TGG | 0.576717 | 6:+15031454 | None:intergenic |
| ATTTGAAGAGAAAGAAGTAA+TGG | 0.576836 | 6:+15032311 | None:intergenic |
| TTGGAGAGAAGAATTTGGAG+GGG | 0.578706 | 6:+15032706 | None:intergenic |
| TTCAAGTTTCAACTTAACAA+TGG | 0.578883 | 6:-15032273 | MsG0680031139.01.T01:CDS |
| GAATGGAGAGAAGCTAGGAC+AGG | 0.580444 | 6:-15031043 | MsG0680031139.01.T01:CDS |
| TTGCCTGCTTTGAATAGGGA+AGG | 0.587367 | 6:-15030938 | MsG0680031139.01.T01:CDS |
| GCAGAATTCGAAGAGCGAGT+AGG | 0.591921 | 6:+15032555 | None:intergenic |
| AATTGATTGCAAGAGCAGCT+AGG | 0.592296 | 6:-15031735 | MsG0680031139.01.T01:CDS |
| AGATCGATCCATCATGGGGT+AGG | 0.594101 | 6:-15031462 | MsG0680031139.01.T01:CDS |
| AAGTTATGGTGAGATCATTG+TGG | 0.597525 | 6:+15032514 | None:intergenic |
| GTTAAGTTGAAACTTGAACC+TGG | 0.602043 | 6:+15032278 | None:intergenic |
| CCACCTTCCCTATTCAAAGC+AGG | 0.604312 | 6:+15030935 | None:intergenic |
| ATGACTTGGCACTCAAGCAA+AGG | 0.607852 | 6:-15031865 | MsG0680031139.01.T01:CDS |
| GGTGTTGGAGAAGGATGGAA+GGG | 0.611057 | 6:-15030914 | MsG0680031139.01.T01:CDS |
| TGGATTCATAGCAGAGGTGA+AGG | 0.613077 | 6:-15030785 | MsG0680031139.01.T01:CDS |
| GGAAGAAAGAGTTTGTAGGG+AGG | 0.615445 | 6:+15032667 | None:intergenic |
| AGCATTGATGGTGACCTTGT+CGG | 0.618988 | 6:-15031931 | MsG0680031139.01.T01:CDS |
| CTGCTGAATGGAGAGAAGCT+AGG | 0.621340 | 6:-15031048 | MsG0680031139.01.T01:CDS |
| AATGGTGGAAATGGAAAGAG+GGG | 0.624455 | 6:+15032338 | None:intergenic |
| GGAGGACTTATTACTCAACA+AGG | 0.629302 | 6:-15031580 | MsG0680031139.01.T01:CDS |
| TTCTTGGAACCAAAATGTGG+TGG | 0.634486 | 6:-15031177 | MsG0680031139.01.T01:CDS |
| TTGTGGTGGATTCATAGCAG+AGG | 0.637020 | 6:-15030791 | MsG0680031139.01.T01:CDS |
| TTAAAAGTTCCATCAAGCCA+AGG | 0.643862 | 6:+15031634 | None:intergenic |
| GAGATCATTGTGGAAAACTT+GGG | 0.645549 | 6:+15032524 | None:intergenic |
| ATGACTCAACTTGATTGGTG+AGG | 0.646672 | 6:+15032227 | None:intergenic |
| CAAGGGTCTAATGATGGTGG+TGG | 0.647467 | 6:-15031562 | MsG0680031139.01.T01:CDS |
| ATGAGTTTGATGATTTGATG+AGG | 0.647642 | 6:+15032595 | None:intergenic |
| CAACAAGGGTCTAATGATGG+TGG | 0.657916 | 6:-15031565 | MsG0680031139.01.T01:CDS |
| AGAATTTGGAGGGGTCAGGG+AGG | 0.658308 | 6:+15032715 | None:intergenic |
| ATTCATAGCAGAGGTGAAGG+TGG | 0.659887 | 6:-15030782 | MsG0680031139.01.T01:CDS |
| CCTGCTTTGAATAGGGAAGG+TGG | 0.660094 | 6:-15030935 | MsG0680031139.01.T01:CDS |
| GGAGGGGTCAGGGAGGACAG+TGG | 0.665821 | 6:+15032722 | None:intergenic |
| AAATTCTTGGAACCAAAATG+TGG | 0.667091 | 6:-15031180 | MsG0680031139.01.T01:CDS |
| AATCACCAACAACACCGACA+AGG | 0.680452 | 6:+15031917 | None:intergenic |
| GGACAGTGGAATTACCCTGT+GGG | 0.685022 | 6:+15032736 | None:intergenic |
| CTATATGATAGAAAATGGGG+AGG | 0.692525 | 6:-15031598 | MsG0680031139.01.T01:CDS |
| GTAAAGATCGATCCATCATG+GGG | 0.699747 | 6:-15031466 | MsG0680031139.01.T01:CDS |
| GAGGACTTATTACTCAACAA+GGG | 0.708106 | 6:-15031579 | MsG0680031139.01.T01:CDS |
| AGGACAGTGGAATTACCCTG+TGG | 0.729927 | 6:+15032735 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTATATGATAGAAAAT+GGG | - | Chr6:15031944-15031963 | MsG0680031139.01.T01:CDS | 15.0% |
| !! | GAGTATAAGTTTGATAAAAA+TGG | - | Chr6:15031495-15031514 | MsG0680031139.01.T01:CDS | 20.0% |
| !! | GATTTCTATATGATAGAAAA+TGG | - | Chr6:15031943-15031962 | MsG0680031139.01.T01:CDS | 20.0% |
| !! | TTTCTATATGATAGAAAATG+GGG | - | Chr6:15031945-15031964 | MsG0680031139.01.T01:CDS | 20.0% |
| !!! | AAAAGTTAGAAACTTTTTGA+AGG | - | Chr6:15031878-15031897 | MsG0680031139.01.T01:CDS | 20.0% |
| !!! | ACAACATCATCTTATTTTTA+TGG | - | Chr6:15031786-15031805 | MsG0680031139.01.T01:CDS | 20.0% |
| ! | AACTTATACTCAACACAAAA+TGG | + | Chr6:15031486-15031505 | None:intergenic | 25.0% |
| ! | AAGAAGATAAGAAGTTTGAA+TGG | - | Chr6:15032701-15032720 | MsG0680031139.01.T01:CDS | 25.0% |
| ! | AAGTTTGATAAAAATGGTTC+AGG | - | Chr6:15031501-15031520 | MsG0680031139.01.T01:CDS | 25.0% |
| ! | ACAAAAGAGAATAGAATAGT+GGG | - | Chr6:15032431-15032450 | MsG0680031139.01.T01:CDS | 25.0% |
| ! | ATTTGAAGAGAAAGAAGTAA+TGG | + | Chr6:15031238-15031257 | None:intergenic | 25.0% |
| ! | GAAAACAAATCTTCAGAAAT+AGG | + | Chr6:15032551-15032570 | None:intergenic | 25.0% |
| ! | GTTACAGAAAAAGTCAAATA+AGG | + | Chr6:15031180-15031199 | None:intergenic | 25.0% |
| ! | TACAAAAGAGAATAGAATAG+TGG | - | Chr6:15032430-15032449 | MsG0680031139.01.T01:CDS | 25.0% |
| ! | TGATTATGTTAAAGATCTTG+TGG | - | Chr6:15032577-15032596 | MsG0680031139.01.T01:CDS | 25.0% |
| ! | TGGAATAATAAAAGAGATAG+TGG | - | Chr6:15032461-15032480 | MsG0680031139.01.T01:CDS | 25.0% |
| !! | AATACCAAACAAAGTTCTAA+TGG | - | Chr6:15031066-15031085 | MsG0680031139.01.T01:CDS | 25.0% |
| !! | AATGATCATCATTTTCACTT+AGG | - | Chr6:15032029-15032048 | MsG0680031139.01.T01:CDS | 25.0% |
| !! | TTCAAGTTTCAACTTAACAA+TGG | - | Chr6:15031273-15031292 | MsG0680031139.01.T01:CDS | 25.0% |
| !! | TTTTCCATTAGAACTTTGTT+TGG | + | Chr6:15031073-15031092 | None:intergenic | 25.0% |
| !!! | TTCAAGTATAAAAGCATTGA+TGG | - | Chr6:15031603-15031622 | MsG0680031139.01.T01:CDS | 25.0% |
| AAAATCTTCCACAAGTGAAT+AGG | + | Chr6:15032126-15032145 | None:intergenic | 30.0% | |
| AAATTCTTGGAACCAAAATG+TGG | - | Chr6:15032366-15032385 | MsG0680031139.01.T01:CDS | 30.0% | |
| AACAAGAAAGAAACTGAGAT+TGG | + | Chr6:15031148-15031167 | None:intergenic | 30.0% | |
| AACTTAACAATGGTCAAACA+TGG | - | Chr6:15031283-15031302 | MsG0680031139.01.T01:CDS | 30.0% | |
| ATGTTAAAGATCTTGTGGAA+TGG | - | Chr6:15032582-15032601 | MsG0680031139.01.T01:CDS | 30.0% | |
| CAAAACTTTGTTCTCAACAA+TGG | - | Chr6:15030901-15030920 | MsG0680031139.01.T01:CDS | 30.0% | |
| CTAACATCATTGGAAATTCT+TGG | - | Chr6:15032353-15032372 | MsG0680031139.01.T01:CDS | 30.0% | |
| GTAAAATGACTCAACTTGAT+TGG | + | Chr6:15031327-15031346 | None:intergenic | 30.0% | |
| TAGATTTGGAGAGAAGAATT+TGG | + | Chr6:15030848-15030867 | None:intergenic | 30.0% | |
| TTTGGAAGAAAGAGTTTGTA+GGG | + | Chr6:15030885-15030904 | None:intergenic | 30.0% | |
| ! | AAATCTTTTCTATTCCCACA+GGG | - | Chr6:15030796-15030815 | MsG0680031139.01.T01:CDS | 30.0% |
| ! | ACTCTTTGACTAATCTTTTG+TGG | - | Chr6:15032738-15032757 | MsG0680031139.01.T01:CDS | 30.0% |
| ! | ATGAGTTTGATGATTTGATG+AGG | + | Chr6:15030954-15030973 | None:intergenic | 30.0% |
| ! | ATTCTGCTGATTAGAAGTTA+TGG | + | Chr6:15031049-15031068 | None:intergenic | 30.0% |
| ! | CATTGTTGAGAACAAAGTTT+TGG | + | Chr6:15030903-15030922 | None:intergenic | 30.0% |
| ! | GATGGAACTTTTAATGGAAA+TGG | - | Chr6:15031921-15031940 | MsG0680031139.01.T01:CDS | 30.0% |
| ! | TCACTTTCTAAAGATGTTGA+AGG | - | Chr6:15031738-15031757 | MsG0680031139.01.T01:CDS | 30.0% |
| ! | TTTGATGATTTGATGAGGTA+AGG | + | Chr6:15030949-15030968 | None:intergenic | 30.0% |
| !! | ATAAAAGAGATAGTGGACTT+TGG | - | Chr6:15032468-15032487 | MsG0680031139.01.T01:CDS | 30.0% |
| !! | TTTTGGAAGAAAGAGTTTGT+AGG | + | Chr6:15030886-15030905 | None:intergenic | 30.0% |
| !!! | AGAAGTTTGAATGGTTTTGA+TGG | - | Chr6:15032710-15032729 | MsG0680031139.01.T01:CDS | 30.0% |
| AAGAAACTGAGATTGGAAGA+AGG | + | Chr6:15031141-15031160 | None:intergenic | 35.0% | |
| AAGTTATGGTGAGATCATTG+TGG | + | Chr6:15031035-15031054 | None:intergenic | 35.0% | |
| ACAGAAGTTGAAGATGAAGA+GGG | + | Chr6:15031548-15031567 | None:intergenic | 35.0% | |
| ACTCAAATTATACGCGTTTG+AGG | - | Chr6:15032168-15032187 | MsG0680031139.01.T01:CDS | 35.0% | |
| AGAAACTGAGATTGGAAGAA+GGG | + | Chr6:15031140-15031159 | None:intergenic | 35.0% | |
| AGGAATTCAGCTTATACCAT+TGG | - | Chr6:15032523-15032542 | MsG0680031139.01.T01:CDS | 35.0% | |
| AGTTTAGCATTACCTGCTAA+AGG | + | Chr6:15031456-15031475 | None:intergenic | 35.0% | |
| ATACTATGCTGCAGCATTAA+TGG | - | Chr6:15032286-15032305 | MsG0680031139.01.T01:CDS | 35.0% | |
| ATCTTTACAAGTTGCATTCG+TGG | - | Chr6:15032198-15032217 | MsG0680031139.01.T01:CDS | 35.0% | |
| ATTCCTTCCATCTGAAAACT+CGG | + | Chr6:15032237-15032256 | None:intergenic | 35.0% | |
| ATTGGAAGAAGGGATATCTA+AGG | + | Chr6:15031130-15031149 | None:intergenic | 35.0% | |
| ATTTGGAGAGAAGAATTTGG+AGG | + | Chr6:15030845-15030864 | None:intergenic | 35.0% | |
| CTATATGATAGAAAATGGGG+AGG | - | Chr6:15031948-15031967 | MsG0680031139.01.T01:CDS | 35.0% | |
| CTCAGTTTCTTTCTTGTTAG+AGG | - | Chr6:15031150-15031169 | MsG0680031139.01.T01:CDS | 35.0% | |
| GAAAGAAGTAATGGCATGAA+TGG | + | Chr6:15031229-15031248 | None:intergenic | 35.0% | |
| GAAGGGATTCTTGTATTCAT+TGG | - | Chr6:15032649-15032668 | MsG0680031139.01.T01:CDS | 35.0% | |
| GAGATCATTGTGGAAAACTT+GGG | + | Chr6:15031025-15031044 | None:intergenic | 35.0% | |
| GAGGACTTATTACTCAACAA+GGG | - | Chr6:15031967-15031986 | MsG0680031139.01.T01:CDS | 35.0% | |
| GATTCTCAACTTGTGTCTAT+TGG | - | Chr6:15032323-15032342 | MsG0680031139.01.T01:CDS | 35.0% | |
| GGATTCTTGTATTCATTGGA+AGG | - | Chr6:15032653-15032672 | MsG0680031139.01.T01:CDS | 35.0% | |
| GGTGGCATGTTAAAAAGAAT+GGG | - | Chr6:15032387-15032406 | MsG0680031139.01.T01:CDS | 35.0% | |
| GTTTAGCATTACCTGCTAAA+GGG | + | Chr6:15031455-15031474 | None:intergenic | 35.0% | |
| TACTATGCTGCAGCATTAAT+GGG | - | Chr6:15032287-15032306 | MsG0680031139.01.T01:CDS | 35.0% | |
| TCTTTACAAGTTGCATTCGT+GGG | - | Chr6:15032199-15032218 | MsG0680031139.01.T01:CDS | 35.0% | |
| TGAGATCATTGTGGAAAACT+TGG | + | Chr6:15031026-15031045 | None:intergenic | 35.0% | |
| TGGATCAACACTAACATCAT+TGG | - | Chr6:15032343-15032362 | MsG0680031139.01.T01:CDS | 35.0% | |
| TGGTGGCATGTTAAAAAGAA+TGG | - | Chr6:15032386-15032405 | MsG0680031139.01.T01:CDS | 35.0% | |
| TGTAAAGATCGATCCATCAT+GGG | - | Chr6:15032079-15032098 | MsG0680031139.01.T01:CDS | 35.0% | |
| TTAAAAGTTCCATCAAGCCA+AGG | + | Chr6:15031915-15031934 | None:intergenic | 35.0% | |
| TTGAAACTTGAACCTGGTAA+GGG | + | Chr6:15031265-15031284 | None:intergenic | 35.0% | |
| TTGTAAAGATCGATCCATCA+TGG | - | Chr6:15032078-15032097 | MsG0680031139.01.T01:CDS | 35.0% | |
| TTTGGAGAGAAGAATTTGGA+GGG | + | Chr6:15030844-15030863 | None:intergenic | 35.0% | |
| ! | ATCATTTCTGACACCTTTTC+CGG | - | Chr6:15031354-15031373 | MsG0680031139.01.T01:CDS | 35.0% |
| ! | CAAATCTTTTCTATTCCCAC+AGG | - | Chr6:15030795-15030814 | MsG0680031139.01.T01:CDS | 35.0% |
| ! | CTTTGACTAATCTTTTGTGG+TGG | - | Chr6:15032741-15032760 | MsG0680031139.01.T01:CDS | 35.0% |
| ! | TGGCTTGATGGAACTTTTAA+TGG | - | Chr6:15031915-15031934 | MsG0680031139.01.T01:CDS | 35.0% |
| ! | TTTAACATGCCACCACATTT+TGG | + | Chr6:15032381-15032400 | None:intergenic | 35.0% |
| !! | AGGTAAGGATGAAAGTATTC+AGG | + | Chr6:15030934-15030953 | None:intergenic | 35.0% |
| !! | ATAGAATAGTGGGAGTTTTG+TGG | - | Chr6:15032441-15032460 | MsG0680031139.01.T01:CDS | 35.0% |
| !! | GTTAAGTTGAAACTTGAACC+TGG | + | Chr6:15031271-15031290 | None:intergenic | 35.0% |
| !! | TCGTTTTTCGAATCAGAATC+CGG | + | Chr6:15031402-15031421 | None:intergenic | 35.0% |
| !!! | AGTTTGAATGGTTTTGATGG+TGG | - | Chr6:15032713-15032732 | MsG0680031139.01.T01:CDS | 35.0% |
| AAGAAAGAGTTTGTAGGGAG+GGG | + | Chr6:15030880-15030899 | None:intergenic | 40.0% | |
| AATCCGAATTATGCCGGAAA+AGG | + | Chr6:15031370-15031389 | None:intergenic | 40.0% | |
| AATTCGGATTGCTTTGCTAC+CGG | - | Chr6:15031380-15031399 | MsG0680031139.01.T01:CDS | 40.0% | |
| AATTGATTGCAAGAGCAGCT+AGG | - | Chr6:15031811-15031830 | MsG0680031139.01.T01:CDS | 40.0% | |
| ACTCAACAAGGGTCTAATGA+TGG | - | Chr6:15031978-15031997 | MsG0680031139.01.T01:CDS | 40.0% | |
| AGAAGTAATGGCATGAATGG+TGG | + | Chr6:15031226-15031245 | None:intergenic | 40.0% | |
| ATGACTCAACTTGATTGGTG+AGG | + | Chr6:15031322-15031341 | None:intergenic | 40.0% | |
| CAAAGCAATCCGAATTATGC+CGG | + | Chr6:15031376-15031395 | None:intergenic | 40.0% | |
| CAGAACCTGTTTCAATGACT+TGG | - | Chr6:15031667-15031686 | MsG0680031139.01.T01:CDS | 40.0% | |
| GAAGAAAGAGTTTGTAGGGA+GGG | + | Chr6:15030881-15030900 | None:intergenic | 40.0% | |
| GACAGAAGTTGAAGATGAAG+AGG | + | Chr6:15031549-15031568 | None:intergenic | 40.0% | |
| GCATTAATGGGAATGGCATA+TGG | - | Chr6:15032299-15032318 | MsG0680031139.01.T01:CDS | 40.0% | |
| GGAGGACTTATTACTCAACA+AGG | - | Chr6:15031966-15031985 | MsG0680031139.01.T01:CDS | 40.0% | |
| GTAAAGATCGATCCATCATG+GGG | - | Chr6:15032080-15032099 | MsG0680031139.01.T01:CDS | 40.0% | |
| GTTGAAACTTGAACCTGGTA+AGG | + | Chr6:15031266-15031285 | None:intergenic | 40.0% | |
| TCTTCAGAAATAGGAGCCAA+TGG | + | Chr6:15032542-15032561 | None:intergenic | 40.0% | |
| TTATACTTCCTACCCCATGA+TGG | + | Chr6:15032095-15032114 | None:intergenic | 40.0% | |
| TTCTTGGAACCAAAATGTGG+TGG | - | Chr6:15032369-15032388 | MsG0680031139.01.T01:CDS | 40.0% | |
| TTGGAGAGAAGAATTTGGAG+GGG | + | Chr6:15030843-15030862 | None:intergenic | 40.0% | |
| ! | AATGGCATGAATGGTGGAAA+TGG | + | Chr6:15031220-15031239 | None:intergenic | 40.0% |
| ! | AATGGTGGAAATGGAAAGAG+GGG | + | Chr6:15031211-15031230 | None:intergenic | 40.0% |
| ! | ACACCTTTTCCGGCATAATT+CGG | - | Chr6:15031364-15031383 | MsG0680031139.01.T01:CDS | 40.0% |
| ! | ATCATGGGGTAGGAAGTATA+AGG | - | Chr6:15032094-15032113 | MsG0680031139.01.T01:CDS | 40.0% |
| ! | GAATGGTGGAAATGGAAAGA+GGG | + | Chr6:15031212-15031231 | None:intergenic | 40.0% |
| ! | GACATTGCCTGCTTTGAATA+GGG | - | Chr6:15032604-15032623 | MsG0680031139.01.T01:CDS | 40.0% |
| ! | TAACCGAGTTTTCAGATGGA+AGG | - | Chr6:15032231-15032250 | MsG0680031139.01.T01:CDS | 40.0% |
| ! | TGAATGGTGGAAATGGAAAG+AGG | + | Chr6:15031213-15031232 | None:intergenic | 40.0% |
| !! | AATGATGGTGGTGGTGATTT+CGG | - | Chr6:15031993-15032012 | MsG0680031139.01.T01:CDS | 40.0% |
| AATCACCAACAACACCGACA+AGG | + | Chr6:15031632-15031651 | None:intergenic | 45.0% | |
| AGAAGAATTTGGAGGGGTCA+GGG | + | Chr6:15030837-15030856 | None:intergenic | 45.0% | |
| AGTTCTTGTCACCCTTTAGC+AGG | - | Chr6:15031441-15031460 | MsG0680031139.01.T01:CDS | 45.0% | |
| ATTCATAGCAGAGGTGAAGG+TGG | - | Chr6:15032764-15032783 | MsG0680031139.01.T01:CDS | 45.0% | |
| CAACAAGGGTCTAATGATGG+TGG | - | Chr6:15031981-15032000 | MsG0680031139.01.T01:CDS | 45.0% | |
| CAGAATTCGAAGAGCGAGTA+GGG | + | Chr6:15030993-15031012 | None:intergenic | 45.0% | |
| CTTCAAATAGCTCCCTTACC+AGG | - | Chr6:15031250-15031269 | MsG0680031139.01.T01:CDS | 45.0% | |
| GAGTGCCAAGTCATTGAAAC+AGG | + | Chr6:15031675-15031694 | None:intergenic | 45.0% | |
| GGAAGAAAGAGTTTGTAGGG+AGG | + | Chr6:15030882-15030901 | None:intergenic | 45.0% | |
| TGAAGGAAACCATTGAGCCT+TGG | - | Chr6:15031895-15031914 | MsG0680031139.01.T01:CDS | 45.0% | |
| TGCTGCAGCATTAATGGGAA+TGG | - | Chr6:15032292-15032311 | MsG0680031139.01.T01:CDS | 45.0% | |
| TGGATTCATAGCAGAGGTGA+AGG | - | Chr6:15032761-15032780 | MsG0680031139.01.T01:CDS | 45.0% | |
| TTGAATAGGGAAGGTGGTGT+TGG | - | Chr6:15032617-15032636 | MsG0680031139.01.T01:CDS | 45.0% | |
| ! | AGGGGTGTGGATAGTAGATT+TGG | + | Chr6:15030862-15030881 | None:intergenic | 45.0% |
| ! | ATGACTTGGCACTCAAGCAA+AGG | - | Chr6:15031681-15031700 | MsG0680031139.01.T01:CDS | 45.0% |
| ! | GCTTGCATTGATAGCTGAAG+AGG | - | Chr6:15031833-15031852 | MsG0680031139.01.T01:CDS | 45.0% |
| ! | GGACATTGCCTGCTTTGAAT+AGG | - | Chr6:15032603-15032622 | MsG0680031139.01.T01:CDS | 45.0% |
| ! | TTGCCTGCTTTGAATAGGGA+AGG | - | Chr6:15032608-15032627 | MsG0680031139.01.T01:CDS | 45.0% |
| !! | AGCATTGATGGTGACCTTGT+CGG | - | Chr6:15031615-15031634 | MsG0680031139.01.T01:CDS | 45.0% |
| !! | TCGGTGTTGTTGGTGATTCA+TGG | - | Chr6:15031634-15031653 | MsG0680031139.01.T01:CDS | 45.0% |
| !! | TTGTGGTGGATTCATAGCAG+AGG | - | Chr6:15032755-15032774 | MsG0680031139.01.T01:CDS | 45.0% |
| !! | TTTGGTTTGCACCTGCTGAA+TGG | - | Chr6:15032486-15032505 | MsG0680031139.01.T01:CDS | 45.0% |
| AGATCGATCCATCATGGGGT+AGG | - | Chr6:15032084-15032103 | MsG0680031139.01.T01:CDS | 50.0% | |
| AGGACAGTGGAATTACCCTG+TGG | + | Chr6:15030814-15030833 | None:intergenic | 50.0% | |
| CCACCTTCCCTATTCAAAGC+AGG | + | Chr6:15032614-15032633 | None:intergenic | 50.0% | |
| CTAGCTTCTCTCCATTCAGC+AGG | + | Chr6:15032500-15032519 | None:intergenic | 50.0% | |
| CTGCTGAATGGAGAGAAGCT+AGG | - | Chr6:15032498-15032517 | MsG0680031139.01.T01:CDS | 50.0% | |
| GAATGGAGAGAAGCTAGGAC+AGG | - | Chr6:15032503-15032522 | MsG0680031139.01.T01:CDS | 50.0% | |
| GAGAAGAATTTGGAGGGGTC+AGG | + | Chr6:15030838-15030857 | None:intergenic | 50.0% | |
| GCAGAATTCGAAGAGCGAGT+AGG | + | Chr6:15030994-15031013 | None:intergenic | 50.0% | |
| GGACAGTGGAATTACCCTGT+GGG | + | Chr6:15030813-15030832 | None:intergenic | 50.0% | |
| GGCTCAAGCCTATTCACTTG+TGG | - | Chr6:15032115-15032134 | MsG0680031139.01.T01:CDS | 50.0% | |
| GTGGAAATGGAAAGAGGGGT+TGG | + | Chr6:15031207-15031226 | None:intergenic | 50.0% | |
| TACAAGTTGCATTCGTGGGC+CGG | - | Chr6:15032203-15032222 | MsG0680031139.01.T01:CDS | 50.0% | |
| TCCATCAAGCCAAGGCTCAA+TGG | + | Chr6:15031907-15031926 | None:intergenic | 50.0% | |
| ! | AAGGTGGTGTTGGAGAAGGA+TGG | - | Chr6:15032627-15032646 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | ACCATTGAGCCTTGGCTTGA+TGG | - | Chr6:15031903-15031922 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | CCTGCTTTGAATAGGGAAGG+TGG | - | Chr6:15032611-15032630 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | GGGCTAACCGAGTTTTCAGA+TGG | - | Chr6:15032227-15032246 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | GGTGGTGGTGATTTCGGTTT+CGG | - | Chr6:15031999-15032018 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | GGTGTTGGAGAAGGATGGAA+GGG | - | Chr6:15032632-15032651 | MsG0680031139.01.T01:CDS | 50.0% |
| ! | TGAAAACTCGGTTAGCCCTC+CGG | + | Chr6:15032225-15032244 | None:intergenic | 50.0% |
| ! | TGGTGTTGGAGAAGGATGGA+AGG | - | Chr6:15032631-15032650 | MsG0680031139.01.T01:CDS | 50.0% |
| !! | CAAGGGTCTAATGATGGTGG+TGG | - | Chr6:15031984-15032003 | MsG0680031139.01.T01:CDS | 50.0% |
| AGAATTTGGAGGGGTCAGGG+AGG | + | Chr6:15030834-15030853 | None:intergenic | 55.0% | |
| AGAGTTTGTAGGGAGGGGTG+TGG | + | Chr6:15030875-15030894 | None:intergenic | 55.0% | |
| ! | AGGGAAGGTGGTGTTGGAGA+AGG | - | Chr6:15032623-15032642 | MsG0680031139.01.T01:CDS | 55.0% |
| !! | GGTGACCTTGTCGGTGTTGT+TGG | - | Chr6:15031624-15031643 | MsG0680031139.01.T01:CDS | 55.0% |
| AAGTTGCATTCGTGGGCCGG+AGG | - | Chr6:15032206-15032225 | MsG0680031139.01.T01:CDS | 60.0% | |
| AGTTGCATTCGTGGGCCGGA+GGG | - | Chr6:15032207-15032226 | MsG0680031139.01.T01:CDS | 60.0% | |
| GGAGGGGTCAGGGAGGACAG+TGG | + | Chr6:15030827-15030846 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 15030772 | 15032796 | 15030772 | ID=MsG0680031139.01;Name=MsG0680031139.01 |
| Chr6 | mRNA | 15030772 | 15032796 | 15030772 | ID=MsG0680031139.01.T01;Parent=MsG0680031139.01;Name=MsG0680031139.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|674 |
| Chr6 | exon | 15030772 | 15032796 | 15030772 | ID=MsG0680031139.01.T01:exon:10169;Parent=MsG0680031139.01.T01 |
| Chr6 | CDS | 15030772 | 15032796 | 15030772 | ID=MsG0680031139.01.T01:cds;Parent=MsG0680031139.01.T01 |
| Gene Sequence |
| Protein sequence |
