AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040497.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040497.01.T01 MTR_7g091550 95.946 222 9 0 1 222 1 222 1.62e-147 443
MsG0780040497.01.T01 MTR_7g091550 70.370 135 40 0 88 222 921 1055 2.78e-59 201
MsG0780040497.01.T01 MTR_7g091570 73.636 220 58 0 3 222 1 220 1.45e-115 331
MsG0780040497.01.T01 MTR_7g491180 73.182 220 57 1 3 222 1 218 5.12e-107 327
MsG0780040497.01.T01 MTR_7g091190 73.182 220 57 1 3 222 1 218 5.12e-107 327
MsG0780040497.01.T01 MTR_7g491190 74.091 220 55 1 3 222 1 218 1.22e-106 328
MsG0780040497.01.T01 MTR_7g091200 74.091 220 55 1 3 222 1 218 1.99e-106 327
MsG0780040497.01.T01 MTR_7g091140 74.091 220 55 1 3 222 1 218 6.13e-105 330
MsG0780040497.01.T01 MTR_7g091110 70.455 220 63 1 3 222 1 218 2.51e-104 322
MsG0780040497.01.T01 MTR_1g047910 69.091 220 68 0 3 222 1 220 3.18e-101 312
MsG0780040497.01.T01 MTR_4g119195 55.455 220 92 3 3 222 1 214 1.39e-68 224
MsG0780040497.01.T01 MTR_4g119195 55.455 220 92 3 3 222 1 214 5.07e-68 224
MsG0780040497.01.T01 MTR_5g076840 55.204 221 91 4 3 222 1 214 3.00e-67 221
MsG0780040497.01.T01 MTR_7g078300 53.182 220 96 2 3 222 1 213 1.05e-65 217
MsG0780040497.01.T01 MTR_7g078640 52.727 220 97 2 3 222 1 213 1.70e-65 216
MsG0780040497.01.T01 MTR_1g078490 47.727 220 107 3 3 222 1 212 3.98e-57 194
MsG0780040497.01.T01 MTR_4g119140 51.364 220 84 4 3 222 1 197 1.89e-56 191
MsG0780040497.01.T01 MTR_2g062350 57.669 163 52 4 3 165 1 146 1.15e-55 174
MsG0780040497.01.T01 MTR_6g037690 51.572 159 76 1 3 161 1 158 1.01e-45 154
MsG0780040497.01.T01 MTR_7g091660 43.379 219 103 5 11 222 1 205 1.65e-44 154
MsG0780040497.01.T01 MTR_4g094540 39.545 220 127 4 6 222 3 219 5.43e-43 154
MsG0780040497.01.T01 MTR_0065s0100 40.090 222 123 6 3 222 1 214 1.89e-38 141
MsG0780040497.01.T01 MTR_7g078630 54.730 148 58 3 76 222 8 147 1.40e-37 139
MsG0780040497.01.T01 MTR_4g050790 36.321 212 127 3 11 222 4 207 2.13e-37 138
MsG0780040497.01.T01 MTR_3g015500 36.321 212 127 3 11 222 42 245 2.72e-37 138
MsG0780040497.01.T01 MTR_8g011300 37.727 220 129 3 3 222 1 212 4.31e-37 137
MsG0780040497.01.T01 MTR_6g452490 37.727 220 130 2 3 222 1 213 2.65e-36 135
MsG0780040497.01.T01 MTR_8g010440 38.462 221 127 5 3 222 1 213 4.51e-36 134
MsG0780040497.01.T01 MTR_8g011180 38.636 220 128 3 3 222 1 213 6.77e-36 134
MsG0780040497.01.T01 MTR_8g011550 35.426 223 132 5 3 222 1 214 3.98e-35 132
MsG0780040497.01.T01 MTR_8g027540 38.636 220 125 6 3 220 1 212 1.24e-34 130
MsG0780040497.01.T01 MTR_7g013560 41.704 223 118 7 3 222 1 214 2.27e-34 129
MsG0780040497.01.T01 MTR_2g078070 33.913 230 130 5 3 222 1 218 2.94e-33 126
MsG0780040497.01.T01 MTR_3g015560 36.792 212 126 3 11 222 4 207 6.70e-33 125
MsG0780040497.01.T01 MTR_8g011170 37.104 221 116 5 3 222 1 199 6.73e-33 125
MsG0780040497.01.T01 MTR_3g015550 36.530 219 131 3 4 222 34 244 7.84e-33 125
MsG0780040497.01.T01 MTR_3g015550 36.792 212 126 3 11 222 4 207 2.56e-32 124
MsG0780040497.01.T01 MTR_3g015280 35.681 213 129 3 10 222 3 207 1.58e-30 119
MsG0780040497.01.T01 MTR_1g030770 37.838 222 127 6 3 222 1 213 3.24e-30 117
MsG0780040497.01.T01 MTR_5g035300 32.710 214 136 3 11 221 5 213 3.13e-28 111
MsG0780040497.01.T01 MTR_5g035480 32.569 218 135 3 11 221 5 217 9.78e-27 107
MsG0780040497.01.T01 MTR_5g035230 30.047 213 139 3 11 221 5 209 1.19e-25 103
MsG0780040497.01.T01 MTR_8g011320 35.455 220 97 6 3 222 1 175 2.74e-25 103
MsG0780040497.01.T01 MTR_5g035280 32.870 216 133 4 11 221 5 213 3.54e-25 103
MsG0780040497.01.T01 MTR_3g026660 31.416 226 123 4 11 221 5 213 5.25e-25 102
MsG0780040497.01.T01 MTR_5g035240 31.481 216 135 5 11 221 5 212 5.66e-25 102
MsG0780040497.01.T01 MTR_3g026660 31.416 226 123 4 11 221 5 213 6.19e-25 102
MsG0780040497.01.T01 MTR_0256s0050 33.632 223 116 8 11 222 1 202 2.02e-24 101
MsG0780040497.01.T01 MTR_5g071823 33.032 221 119 6 11 222 1 201 2.59e-24 100
MsG0780040497.01.T01 MTR_5g071850 33.032 221 119 6 11 222 1 201 2.59e-24 100
MsG0780040497.01.T01 MTR_3g086070 32.057 209 124 4 15 221 9 201 2.80e-24 100
MsG0780040497.01.T01 MTR_5g070490 33.333 222 117 6 11 222 1 201 4.25e-24 100
MsG0780040497.01.T01 MTR_5g034770 31.731 208 130 3 16 218 10 210 6.67e-24 99.8
MsG0780040497.01.T01 MTR_6g046440 33.184 223 117 8 11 222 1 202 1.62e-23 98.6
MsG0780040497.01.T01 MTR_8g036195 32.579 221 122 7 11 222 1 203 2.43e-23 98.2
MsG0780040497.01.T01 MTR_1g023600 34.081 223 111 8 11 222 1 198 2.53e-23 98.2
MsG0780040497.01.T01 MTR_8g037220 33.182 220 137 4 3 222 780 989 2.64e-23 98.2
MsG0780040497.01.T01 MTR_8g037220 33.182 220 137 4 3 222 1001 1210 2.83e-23 98.2
MsG0780040497.01.T01 MTR_5g071220 33.784 222 116 6 11 222 1 201 1.63e-22 95.9
MsG0780040497.01.T01 MTR_8g445980 30.000 220 137 5 6 222 6 211 1.67e-22 95.5
MsG0780040497.01.T01 MTR_5g071220 33.784 222 116 6 11 222 1 201 1.71e-22 95.9
MsG0780040497.01.T01 MTR_5g071800 30.594 219 127 6 11 222 1 201 1.96e-22 95.5
MsG0780040497.01.T01 MTR_5g072340 33.184 223 116 7 11 222 1 201 2.19e-22 95.5
MsG0780040497.01.T01 MTR_0133s0020 32.569 218 125 6 11 222 1 202 2.40e-22 95.1
MsG0780040497.01.T01 MTR_5g071780 30.594 219 127 6 11 222 1 201 2.46e-22 95.1
MsG0780040497.01.T01 MTR_5g072250 30.137 219 128 6 11 222 1 201 2.69e-22 95.1
MsG0780040497.01.T01 MTR_5g037450 31.193 218 138 4 11 221 5 217 2.89e-22 95.1
MsG0780040497.01.T01 MTR_4g021690 34.389 221 133 5 3 222 1 210 3.69e-22 94.7
MsG0780040497.01.T01 MTR_4g022960 35.160 219 130 5 3 220 1 208 3.94e-22 94.7
MsG0780040497.01.T01 MTR_6g046480 30.045 223 126 7 11 222 1 204 6.90e-22 94.0
MsG0780040497.01.T01 MTR_0133s0030 31.982 222 123 8 11 222 1 204 2.12e-21 92.4
MsG0780040497.01.T01 MTR_0144s0060 30.769 221 126 6 11 222 1 203 4.29e-21 91.7
MsG0780040497.01.T01 MTR_5g071470 32.287 223 118 7 11 222 1 201 5.02e-21 91.3
MsG0780040497.01.T01 MTR_5g071310 30.804 224 116 7 11 222 1 197 7.62e-21 90.9
MsG0780040497.01.T01 MTR_5g071670 30.045 223 118 8 11 222 1 196 1.72e-20 90.1
MsG0780040497.01.T01 MTR_3g032110 30.000 220 142 6 6 222 9 219 1.73e-20 89.7
MsG0780040497.01.T01 MTR_4g055630 29.224 219 130 6 11 222 1 201 1.91e-20 89.7
MsG0780040497.01.T01 MTR_3g030980 29.817 218 144 3 6 222 9 218 2.14e-20 89.7
MsG0780040497.01.T01 MTR_1g047800 30.841 214 126 4 11 222 14 207 2.37e-20 89.4
MsG0780040497.01.T01 MTR_3g030960 29.817 218 144 3 6 222 9 218 2.38e-20 89.4
MsG0780040497.01.T01 MTR_5g070470 31.982 222 120 6 11 222 1 201 2.41e-20 89.4
MsG0780040497.01.T01 MTR_6g046130 32.110 218 127 6 11 222 1 203 2.65e-20 89.4
MsG0780040497.01.T01 MTR_5g070960 31.839 223 119 7 11 222 1 201 2.71e-20 89.4
MsG0780040497.01.T01 MTR_7g071940 29.680 219 124 7 11 222 1 196 2.76e-20 89.4
MsG0780040497.01.T01 MTR_3g032960 30.455 220 140 7 6 222 9 218 2.97e-20 89.4
MsG0780040497.01.T01 MTR_6g046570 28.704 216 134 4 9 222 3 200 3.27e-20 89.0
MsG0780040497.01.T01 MTR_6g052760 31.050 219 128 7 11 222 1 203 3.47e-20 89.0
MsG0780040497.01.T01 MTR_0230s0010 31.884 207 122 6 19 222 13 203 3.77e-20 89.0
MsG0780040497.01.T01 MTR_3g019040 32.984 191 111 4 37 221 40 219 5.87e-20 88.2
MsG0780040497.01.T01 MTR_4g022460 32.579 221 137 5 3 222 1 210 6.46e-20 88.2
MsG0780040497.01.T01 MTR_6g047450 30.317 221 127 8 11 222 1 203 7.45e-20 88.2
MsG0780040497.01.T01 MTR_2g038510 28.846 208 134 3 18 221 12 209 8.69e-20 87.8
MsG0780040497.01.T01 MTR_5g072140 29.224 219 130 6 11 222 1 201 9.77e-20 87.8
MsG0780040497.01.T01 MTR_6g046620 31.193 218 129 6 11 222 1 203 1.24e-19 87.4
MsG0780040497.01.T01 MTR_3g027250 33.508 191 102 4 37 222 35 205 1.31e-19 87.4
MsG0780040497.01.T01 MTR_3g020890 35.052 194 92 7 37 222 41 208 1.41e-19 87.4
MsG0780040497.01.T01 MTR_0511s0020 31.401 207 123 6 19 222 13 203 1.77e-19 87.0
MsG0780040497.01.T01 MTR_6g046550 29.075 227 129 7 11 222 1 210 2.22e-19 86.7
MsG0780040497.01.T01 MTR_3g032800 30.909 220 139 7 6 222 9 218 2.41e-19 86.7
MsG0780040497.01.T01 MTR_4g022480 33.484 221 135 5 3 222 1 210 7.92e-19 85.1
MsG0780040497.01.T01 MTR_5g037500 29.907 214 142 3 11 221 5 213 8.61e-19 85.1
MsG0780040497.01.T01 MTR_3g435720 30.000 220 141 6 6 222 9 218 1.02e-18 84.7
MsG0780040497.01.T01 MTR_4g022560 33.032 221 136 5 3 222 1 210 1.39e-18 84.3
MsG0780040497.01.T01 MTR_2g063777 29.412 221 143 6 5 222 8 218 1.75e-18 84.0
MsG0780040497.01.T01 MTR_3g028040 31.383 188 117 6 37 222 41 218 1.91e-18 84.0
MsG0780040497.01.T01 MTR_3g023320 32.258 217 128 6 11 222 1 203 2.21e-18 84.0
MsG0780040497.01.T01 MTR_1g022380 29.384 211 115 6 19 222 13 196 3.14e-18 83.2
MsG0780040497.01.T01 MTR_5g071570 30.986 213 117 6 18 222 12 202 3.66e-18 83.2
MsG0780040497.01.T01 MTR_3g014390 33.333 189 112 5 37 222 40 217 6.15e-18 82.4
MsG0780040497.01.T01 MTR_5g039570 27.778 216 112 5 11 222 1 176 6.72e-18 82.0
MsG0780040497.01.T01 MTR_6g052750 28.372 215 127 7 11 216 1 197 8.37e-18 78.6
MsG0780040497.01.T01 MTR_3g032150 30.769 221 138 7 6 222 7 216 1.06e-17 81.6
MsG0780040497.01.T01 MTR_3g014470 33.333 189 112 5 37 222 40 217 1.07e-17 81.6
MsG0780040497.01.T01 MTR_6g046930 27.602 221 131 7 11 222 1 201 1.08e-17 81.6
MsG0780040497.01.T01 MTR_3g018980 34.715 193 107 7 37 222 40 220 1.22e-17 81.6
MsG0780040497.01.T01 MTR_3g018980 34.715 193 107 7 37 222 40 220 1.57e-17 81.3
MsG0780040497.01.T01 MTR_3g035960 30.804 224 134 8 6 222 9 218 1.73e-17 81.3
MsG0780040497.01.T01 MTR_3g033080 30.000 190 116 5 34 222 38 211 2.27e-17 80.9
MsG0780040497.01.T01 MTR_3g014360 29.614 233 128 8 5 222 7 218 2.97e-17 80.5
MsG0780040497.01.T01 MTR_3g032370 30.000 220 141 6 6 222 7 216 3.31e-17 80.5
MsG0780040497.01.T01 MTR_3g014080 33.333 183 99 7 48 222 50 217 3.81e-17 80.1
MsG0780040497.01.T01 MTR_0005s0200 35.227 176 105 3 47 222 69 235 3.85e-17 80.1
MsG0780040497.01.T01 MTR_3g014080 33.333 183 99 7 48 222 50 217 4.55e-17 80.1
MsG0780040497.01.T01 MTR_2g014730 31.507 219 132 6 5 221 8 210 5.01e-17 79.7
MsG0780040497.01.T01 MTR_3g018930 33.333 192 111 6 37 222 42 222 5.30e-17 79.7
MsG0780040497.01.T01 MTR_3g032340 28.444 225 143 7 6 222 9 223 5.45e-17 79.7
MsG0780040497.01.T01 MTR_3g015260 35.294 187 100 7 43 222 48 220 9.83e-17 79.0
MsG0780040497.01.T01 MTR_3g027420 35.586 222 113 10 6 222 8 204 1.04e-16 79.0
MsG0780040497.01.T01 MTR_3g033860 30.508 177 115 3 46 222 50 218 1.32e-16 78.6
MsG0780040497.01.T01 MTR_3g018930 32.292 192 113 5 37 222 42 222 1.55e-16 78.6
MsG0780040497.01.T01 MTR_0002s0090 31.461 178 108 6 48 222 52 218 1.59e-16 78.6
MsG0780040497.01.T01 MTR_3g035500 31.461 178 108 6 48 222 52 218 1.59e-16 78.6
MsG0780040497.01.T01 MTR_3g031940 29.018 224 142 7 6 222 9 222 1.61e-16 78.2
MsG0780040497.01.T01 MTR_3g032200 29.018 224 142 7 6 222 9 222 1.89e-16 78.2
MsG0780040497.01.T01 MTR_3g015260 34.409 186 103 6 43 222 48 220 2.00e-16 78.2
MsG0780040497.01.T01 MTR_3g435740 30.159 189 116 5 34 222 83 255 2.54e-16 77.8
MsG0780040497.01.T01 MTR_8g038590 30.000 190 124 4 37 222 41 225 2.86e-16 77.8
MsG0780040497.01.T01 MTR_3g022790 33.333 192 107 7 37 222 35 211 3.91e-16 77.4
MsG0780040497.01.T01 MTR_3g033240 28.444 225 138 4 6 222 9 218 4.41e-16 77.0
MsG0780040497.01.T01 MTR_3g033380 29.018 224 142 7 6 222 9 222 5.21e-16 77.0
MsG0780040497.01.T01 MTR_3g032500 29.464 224 141 7 6 222 9 222 5.72e-16 76.6
MsG0780040497.01.T01 MTR_3g035940 32.597 181 102 7 48 222 52 218 6.46e-16 76.6
MsG0780040497.01.T01 MTR_3g014510 29.381 194 115 6 37 222 40 219 7.02e-16 76.6
MsG0780040497.01.T01 MTR_5g040900 31.068 206 106 5 19 222 13 184 1.43e-15 75.5
MsG0780040497.01.T01 MTR_5g095910 32.579 221 135 6 5 221 8 218 1.85e-15 75.1
MsG0780040497.01.T01 MTR_3g033110 29.630 189 117 5 34 222 38 210 2.63e-15 74.7
MsG0780040497.01.T01 MTR_3g034430 30.168 179 113 6 46 222 50 218 2.69e-15 74.7
MsG0780040497.01.T01 MTR_1g037610 28.272 191 120 5 37 222 40 218 2.95e-15 74.7
MsG0780040497.01.T01 MTR_3g035840 32.571 175 106 6 50 222 54 218 3.25e-15 74.3
MsG0780040497.01.T01 MTR_3g022300 27.778 216 136 4 15 222 17 220 3.62e-15 74.3
MsG0780040497.01.T01 MTR_3g034380 28.492 179 116 5 46 222 50 218 5.15e-15 73.9
MsG0780040497.01.T01 MTR_3g035480 29.464 224 137 8 6 222 9 218 6.62e-15 73.6
MsG0780040497.01.T01 MTR_4g022540 33.032 221 136 5 3 222 1 210 9.23e-15 73.2
MsG0780040497.01.T01 MTR_0002s0110 29.911 224 136 8 6 222 9 218 1.15e-14 72.8
MsG0780040497.01.T01 MTR_0267s0070 31.319 182 94 5 48 222 51 208 1.21e-14 72.8
MsG0780040497.01.T01 MTR_8g011850 30.455 220 113 4 3 222 1102 1281 1.28e-14 72.8
MsG0780040497.01.T01 MTR_6g016420 26.339 224 137 5 2 222 3 201 1.39e-14 72.8
MsG0780040497.01.T01 MTR_6g016420 26.339 224 137 5 2 222 3 201 1.59e-14 72.4
MsG0780040497.01.T01 MTR_3g014320 30.412 194 112 6 37 222 40 218 1.68e-14 72.4
MsG0780040497.01.T01 MTR_3g056590 25.000 212 133 5 25 221 19 219 1.77e-14 72.4
MsG0780040497.01.T01 MTR_0425s0020 28.311 219 131 7 15 222 17 220 1.81e-14 72.4
MsG0780040497.01.T01 MTR_4g050410 26.244 221 140 6 6 222 9 210 1.85e-14 72.4
MsG0780040497.01.T01 MTR_3g034460 34.161 161 94 7 63 221 51 201 2.35e-14 72.0
MsG0780040497.01.T01 MTR_3g032760 30.588 170 110 3 53 222 57 218 6.09e-14 70.9
MsG0780040497.01.T01 MTR_3g022600 26.389 216 139 4 15 222 17 220 7.43e-14 70.5
MsG0780040497.01.T01 MTR_7g021000 29.688 192 109 5 37 222 35 206 8.16e-14 70.5
MsG0780040497.01.T01 MTR_7g021000 29.688 192 109 5 37 222 35 206 1.07e-13 70.1
MsG0780040497.01.T01 MTR_3g021340 33.862 189 100 7 37 222 36 202 1.21e-13 70.1
MsG0780040497.01.T01 MTR_8g030860 28.571 224 139 7 6 222 9 218 1.24e-13 70.1
MsG0780040497.01.T01 MTR_1g008240 30.901 233 120 9 3 222 1 205 1.57e-13 69.7
MsG0780040497.01.T01 MTR_6g084550 28.947 190 121 6 37 222 41 220 1.83e-13 69.3
MsG0780040497.01.T01 MTR_0003s0170 29.148 223 126 6 1 222 2 193 2.34e-13 67.8
MsG0780040497.01.T01 MTR_3g021100 29.075 227 133 7 1 222 4 207 2.96e-13 68.9
MsG0780040497.01.T01 MTR_7g015770 26.667 225 138 8 1 221 1 202 4.73e-13 68.2
MsG0780040497.01.T01 MTR_3g012270 25.806 217 125 6 25 221 27 227 4.96e-13 68.2
MsG0780040497.01.T01 MTR_8g106550 30.588 170 110 3 53 222 27 188 6.83e-13 67.8
MsG0780040497.01.T01 MTR_2g014840 30.769 221 136 6 5 221 8 215 7.41e-13 67.8
MsG0780040497.01.T01 MTR_6g016430 29.767 215 123 7 14 222 11 203 1.35e-12 67.0
MsG0780040497.01.T01 MTR_3g011420 24.670 227 141 6 12 221 6 219 1.36e-12 66.6
MsG0780040497.01.T01 MTR_3g027200 28.440 218 132 5 15 222 17 220 1.43e-12 66.6
MsG0780040497.01.T01 MTR_2g014820 31.839 223 131 7 5 221 8 215 1.87e-12 66.2
MsG0780040497.01.T01 MTR_3g070590 29.348 184 92 5 47 222 49 202 3.46e-12 65.5
MsG0780040497.01.T01 MTR_5g027870 23.636 220 145 6 10 222 3 206 3.49e-12 65.5
MsG0780040497.01.T01 MTR_8g038570 26.404 178 117 3 53 222 57 228 4.65e-12 65.5
MsG0780040497.01.T01 MTR_7g078790 29.143 175 104 5 49 222 51 206 5.44e-12 65.1
MsG0780040497.01.T01 MTR_7g091090 66.667 42 14 0 181 222 39 80 6.49e-12 64.3
MsG0780040497.01.T01 MTR_8g043600 28.743 167 100 6 37 201 13 162 8.52e-12 64.3
MsG0780040497.01.T01 MTR_5g027810 27.962 211 136 5 15 222 9 206 9.91e-12 64.3
MsG0780040497.01.T01 MTR_3g071130 28.804 184 93 5 47 222 49 202 1.20e-11 63.9
MsG0780040497.01.T01 MTR_3g022230 26.291 213 137 4 18 222 20 220 1.59e-11 63.9
MsG0780040497.01.T01 MTR_3g021170 29.787 188 108 5 37 222 36 201 1.76e-11 63.5
MsG0780040497.01.T01 MTR_1g037730 31.319 182 107 5 48 222 52 222 1.94e-11 63.2
MsG0780040497.01.T01 MTR_3g011370 25.561 223 136 8 16 221 10 219 2.18e-11 63.2
MsG0780040497.01.T01 MTR_3g011300 24.664 223 138 7 16 221 10 219 2.31e-11 63.2
MsG0780040497.01.T01 MTR_3g012090 24.107 224 138 7 15 221 9 217 3.79e-11 62.4
MsG0780040497.01.T01 MTR_3g023030 25.346 217 142 4 15 222 17 222 4.82e-11 62.4
MsG0780040497.01.T01 MTR_3g023030 25.352 213 147 4 15 222 17 222 5.32e-11 62.0
MsG0780040497.01.T01 MTR_3g011270 25.792 221 137 7 15 220 9 217 6.19e-11 62.0
MsG0780040497.01.T01 MTR_3g012250 24.893 233 133 7 16 221 10 227 6.24e-11 62.0
MsG0780040497.01.T01 MTR_3g014040 31.319 182 107 6 48 222 52 222 6.73e-11 62.0
MsG0780040497.01.T01 MTR_3g056585 23.556 225 145 6 10 221 3 213 8.46e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040497.01.T01 AT3G14470 29.185 233 131 7 5 222 6 219 1.98e-19 87.0
MsG0780040497.01.T01 AT3G14470 29.185 233 131 7 5 222 6 219 1.98e-19 87.0
MsG0780040497.01.T01 AT1G50180 30.000 210 127 6 18 221 12 207 2.84e-15 74.7
MsG0780040497.01.T01 AT3G46530 27.602 221 132 7 11 221 5 207 1.18e-14 72.8
MsG0780040497.01.T01 AT1G53350 27.619 210 130 4 18 221 12 205 2.81e-14 71.6
MsG0780040497.01.T01 AT1G59780 29.956 227 121 10 3 221 1 197 3.42e-14 71.6
MsG0780040497.01.T01 AT1G59780 29.956 227 121 10 3 221 6 202 3.70e-14 71.6
MsG0780040497.01.T01 AT1G58410 26.066 211 133 5 18 221 10 204 1.63e-13 69.7
MsG0780040497.01.T01 AT1G58410 26.066 211 133 5 18 221 10 204 1.63e-13 69.7
MsG0780040497.01.T01 AT1G58410 26.066 211 133 5 18 221 10 204 1.63e-13 69.7
MsG0780040497.01.T01 AT1G58410 26.066 211 133 5 18 221 10 204 1.66e-13 69.7
MsG0780040497.01.T01 AT1G58400 26.991 226 138 8 3 221 1 206 2.59e-13 68.9
MsG0780040497.01.T01 AT1G58400 26.991 226 138 8 3 221 1 206 2.59e-13 68.9
MsG0780040497.01.T01 AT1G58400 26.991 226 138 8 3 221 1 206 3.09e-13 68.6
MsG0780040497.01.T01 AT5G35450 25.238 210 135 4 18 221 12 205 1.98e-12 66.2
MsG0780040497.01.T01 AT5G35450 25.238 210 135 4 18 221 12 205 1.98e-12 66.2
MsG0780040497.01.T01 AT3G46710 26.147 218 138 6 11 221 5 206 2.55e-12 65.9
MsG0780040497.01.T01 AT3G46730 25.688 218 140 5 11 221 5 207 3.29e-12 65.9
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G48620 28.037 214 130 6 16 221 10 207 3.98e-12 65.5
MsG0780040497.01.T01 AT5G43470 27.193 228 136 7 3 221 1 207 6.08e-12 65.1
MsG0780040497.01.T01 AT5G43470 27.193 228 136 7 3 221 1 207 6.08e-12 65.1
MsG0780040497.01.T01 AT5G43470 27.193 228 136 7 3 221 1 207 6.08e-12 65.1
MsG0780040497.01.T01 AT5G43470 27.193 228 136 7 3 221 1 207 6.08e-12 65.1
MsG0780040497.01.T01 AT1G58390 26.415 212 134 4 16 221 10 205 6.56e-12 64.7
MsG0780040497.01.T01 AT1G58390 26.415 212 134 4 16 221 10 205 6.56e-12 64.7
MsG0780040497.01.T01 AT1G58602 27.982 218 128 8 17 221 3 204 6.62e-12 64.7
MsG0780040497.01.T01 AT1G58602 27.982 218 128 8 17 221 3 204 6.62e-12 64.7
MsG0780040497.01.T01 AT1G58807 28.061 196 119 4 32 221 26 205 1.76e-11 63.5
MsG0780040497.01.T01 AT1G59124 28.061 196 119 4 32 221 26 205 1.76e-11 63.5
MsG0780040497.01.T01 AT1G58807 28.061 196 119 4 32 221 26 205 2.21e-11 63.2
MsG0780040497.01.T01 AT1G59124 28.061 196 119 4 32 221 26 205 2.21e-11 63.2
MsG0780040497.01.T01 AT1G58848 27.751 209 129 6 19 221 13 205 2.28e-11 63.2
MsG0780040497.01.T01 AT1G59218 27.751 209 129 6 19 221 13 205 2.28e-11 63.2
MsG0780040497.01.T01 AT1G59218 27.751 209 129 6 19 221 13 205 2.28e-11 63.2
MsG0780040497.01.T01 AT1G59218 27.751 209 129 6 19 221 13 205 2.28e-11 63.2
MsG0780040497.01.T01 AT1G58848 27.751 209 129 6 19 221 13 205 2.28e-11 63.2

Find 57 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGACCACACTTGCAAAAT+TGG 0.257344 7:+78409458 MsG0780040497.01.T01:CDS
GATGTTGCTAATTCACTGTT+AGG 0.284491 7:+78408853 MsG0780040497.01.T01:CDS
CAATCCTCCAATTCCCACTA+TGG 0.287530 7:-78409433 None:intergenic
GTTGATCCTTCAAGTGTAAT+AGG 0.307828 7:+78409318 MsG0780040497.01.T01:CDS
CAAAGAGATTAGAGATAGAT+TGG 0.331693 7:+78409200 MsG0780040497.01.T01:CDS
TTTCCTAGTTAACATGGATA+TGG 0.348129 7:+78408813 None:intergenic
GCAGCTGATGGGACCAAGTT+TGG 0.349399 7:+78409231 MsG0780040497.01.T01:CDS
TCCCTTCCTATTACACTTGA+AGG 0.371648 7:-78409324 None:intergenic
TCTCCTGTGCACAGAAAGTC+CGG 0.386212 7:-78409277 None:intergenic
GTTATTCCCATAGTGGGAAT+TGG 0.391629 7:+78409426 MsG0780040497.01.T01:CDS
TAGAGATAGATTGGATAAAG+TGG 0.414018 7:+78409209 MsG0780040497.01.T01:CDS
ATAGTGGGAATTGGAGGATT+GGG 0.422556 7:+78409435 MsG0780040497.01.T01:CDS
TTCTGGAAGCACACGGTTGA+AGG 0.422674 7:+78409116 MsG0780040497.01.T01:CDS
TGAAGGATCAACATGGGAAT+AGG 0.428035 7:-78409307 None:intergenic
CTATGACGCTGAAGATGTAT+TGG 0.431466 7:+78409050 MsG0780040497.01.T01:CDS
GATTCCGATCCTCAAGGTTA+TGG 0.450638 7:+78409381 MsG0780040497.01.T01:CDS
ATGTTGCTAATTCACTGTTA+GGG 0.462377 7:+78408854 MsG0780040497.01.T01:CDS
ATGGATTTGAGTTGCAAGAC+AGG 0.468855 7:+78409073 MsG0780040497.01.T01:CDS
ATAGAGTATCTTTGATCCGT+TGG 0.469456 7:-78408936 None:intergenic
GAAGAAGCTTCTCGTGCCTA+TGG 0.482171 7:+78408898 MsG0780040497.01.T01:CDS
AATTCTCACAAGTCCAAACT+TGG 0.485548 7:-78409244 None:intergenic
AACAACATGCCTTGTGTGAA+TGG 0.489853 7:+78409004 MsG0780040497.01.T01:CDS
AGCCCGGACTTTCTGTGCAC+AGG 0.491219 7:+78409274 MsG0780040497.01.T01:CDS
TTTATGTGTTATTCCCATAG+TGG 0.492453 7:+78409419 MsG0780040497.01.T01:CDS
ATGCCTTGTGTGAATGGTTA+AGG 0.497955 7:+78409010 MsG0780040497.01.T01:CDS
CATAGTGGGAATTGGAGGAT+TGG 0.514297 7:+78409434 MsG0780040497.01.T01:CDS
ATTCACACAAGGCATGTTGT+TGG 0.520708 7:-78409002 None:intergenic
TTTGACGTGACATCCTAAAA+CGG 0.521202 7:-78409176 None:intergenic
ATTCCCATAGTGGGAATTGG+AGG 0.526069 7:+78409429 MsG0780040497.01.T01:CDS
GTGAGAATTCATGTTGAGCC+CGG 0.526785 7:+78409258 MsG0780040497.01.T01:CDS
TTATGTGTTATTCCCATAGT+GGG 0.527830 7:+78409420 MsG0780040497.01.T01:CDS
TTGGATAAAGTGGCAGCTGA+TGG 0.529271 7:+78409219 MsG0780040497.01.T01:CDS
AATTGGTGTACAATGAATAG+AGG 0.531605 7:+78409475 MsG0780040497.01.T01:CDS
ATCCTTCAAGTGTAATAGGA+AGG 0.542221 7:+78409322 MsG0780040497.01.T01:CDS
AATTGTCAGAGGTCTACTGC+TGG 0.543163 7:+78408960 MsG0780040497.01.T01:CDS
TGGATAAAGTGGCAGCTGAT+GGG 0.545216 7:+78409220 MsG0780040497.01.T01:CDS
AATCCTCCAATTCCCACTAT+GGG 0.556639 7:-78409432 None:intergenic
GATCGGAATCCATCAAAAGC+TGG 0.562821 7:-78409368 None:intergenic
AGGTCTACTGCTGGATGCTG+AGG 0.572993 7:+78408969 MsG0780040497.01.T01:CDS
ATCCTAAAACGGAAAGCAAG+TGG 0.582693 7:-78409165 None:intergenic
GATCCTCAAGGTTATGGCAA+TGG 0.593730 7:+78409387 MsG0780040497.01.T01:CDS
GAGATCTTCATATACACCAT+AGG 0.600452 7:-78408914 None:intergenic
TCCTTCAAGTGTAATAGGAA+GGG 0.604864 7:+78409323 MsG0780040497.01.T01:CDS
CTCCTGTGCACAGAAAGTCC+GGG 0.605832 7:-78409276 None:intergenic
TGGAAGCTTCTGGAAGCACA+CGG 0.606364 7:+78409109 MsG0780040497.01.T01:CDS
GATTAGAGCAAGAAAAGAAG+TGG 0.607060 7:-78409143 None:intergenic
TAGTGGGAATTGGAGGATTG+GGG 0.607934 7:+78409436 MsG0780040497.01.T01:CDS
GACGCTGAAGATGTATTGGA+TGG 0.612215 7:+78409054 MsG0780040497.01.T01:CDS
TTGATGGATTCCGATCCTCA+AGG 0.628905 7:+78409375 MsG0780040497.01.T01:CDS
ATTGCCATAACCTTGAGGAT+CGG 0.632106 7:-78409385 None:intergenic
TACACTTGAAGGATCAACAT+GGG 0.640602 7:-78409313 None:intergenic
CTGCCTTAACCATTCACACA+AGG 0.643287 7:-78409013 None:intergenic
GTGTATATGAAGATCTCCAA+CGG 0.644847 7:+78408920 MsG0780040497.01.T01:CDS
GATACTCTATCAATTGTCAG+AGG 0.645751 7:+78408949 MsG0780040497.01.T01:CDS
TGACCATTGCCATAACCTTG+AGG 0.652121 7:-78409390 None:intergenic
AATAGGAAGGGAGAATGACA+AGG 0.655204 7:+78409335 MsG0780040497.01.T01:CDS
TTACACTTGAAGGATCAACA+TGG 0.719279 7:-78409314 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATGTTGCTAATTCACTGTTA+GGG + Chr7:78408854-78408873 MsG0780040497.01.T01:CDS 30.0%
CAAAGAGATTAGAGATAGAT+TGG + Chr7:78409200-78409219 MsG0780040497.01.T01:CDS 30.0%
TAGAGATAGATTGGATAAAG+TGG + Chr7:78409209-78409228 MsG0780040497.01.T01:CDS 30.0%
! TTATGTGTTATTCCCATAGT+GGG + Chr7:78409420-78409439 MsG0780040497.01.T01:CDS 30.0%
! TTTATGTGTTATTCCCATAG+TGG + Chr7:78409419-78409438 MsG0780040497.01.T01:CDS 30.0%
AATTCTCACAAGTCCAAACT+TGG - Chr7:78409247-78409266 None:intergenic 35.0%
ATCCTTCAAGTGTAATAGGA+AGG + Chr7:78409322-78409341 MsG0780040497.01.T01:CDS 35.0%
GAGATCTTCATATACACCAT+AGG - Chr7:78408917-78408936 None:intergenic 35.0%
GATACTCTATCAATTGTCAG+AGG + Chr7:78408949-78408968 MsG0780040497.01.T01:CDS 35.0%
GATGTTGCTAATTCACTGTT+AGG + Chr7:78408853-78408872 MsG0780040497.01.T01:CDS 35.0%
GATTAGAGCAAGAAAAGAAG+TGG - Chr7:78409146-78409165 None:intergenic 35.0%
GTGTATATGAAGATCTCCAA+CGG + Chr7:78408920-78408939 MsG0780040497.01.T01:CDS 35.0%
GTTGATCCTTCAAGTGTAAT+AGG + Chr7:78409318-78409337 MsG0780040497.01.T01:CDS 35.0%
TACACTTGAAGGATCAACAT+GGG - Chr7:78409316-78409335 None:intergenic 35.0%
TCCTTCAAGTGTAATAGGAA+GGG + Chr7:78409323-78409342 MsG0780040497.01.T01:CDS 35.0%
TTACACTTGAAGGATCAACA+TGG - Chr7:78409317-78409336 None:intergenic 35.0%
TTTGACGTGACATCCTAAAA+CGG - Chr7:78409179-78409198 None:intergenic 35.0%
! AGACAGGAGAAAGCAATTTT+TGG + Chr7:78409089-78409108 MsG0780040497.01.T01:CDS 35.0%
! AGCAATTATCCAGCTTTTGA+TGG + Chr7:78409359-78409378 MsG0780040497.01.T01:CDS 35.0%
! ATAGAGTATCTTTGATCCGT+TGG - Chr7:78408939-78408958 None:intergenic 35.0%
!! AAGCAATTTTTGGAAGCTTC+TGG + Chr7:78409099-78409118 MsG0780040497.01.T01:CDS 35.0%
AACAACATGCCTTGTGTGAA+TGG + Chr7:78409004-78409023 MsG0780040497.01.T01:CDS 40.0%
AATAGGAAGGGAGAATGACA+AGG + Chr7:78409335-78409354 MsG0780040497.01.T01:CDS 40.0%
AATCCTCCAATTCCCACTAT+GGG - Chr7:78409435-78409454 None:intergenic 40.0%
ATCCTAAAACGGAAAGCAAG+TGG - Chr7:78409168-78409187 None:intergenic 40.0%
ATGCCTTGTGTGAATGGTTA+AGG + Chr7:78409010-78409029 MsG0780040497.01.T01:CDS 40.0%
ATTCACACAAGGCATGTTGT+TGG - Chr7:78409005-78409024 None:intergenic 40.0%
ATTGCCATAACCTTGAGGAT+CGG - Chr7:78409388-78409407 None:intergenic 40.0%
CTATGACGCTGAAGATGTAT+TGG + Chr7:78409050-78409069 MsG0780040497.01.T01:CDS 40.0%
GAAGACCACACTTGCAAAAT+TGG + Chr7:78409458-78409477 MsG0780040497.01.T01:CDS 40.0%
TCCCTTCCTATTACACTTGA+AGG - Chr7:78409327-78409346 None:intergenic 40.0%
TGAAGGATCAACATGGGAAT+AGG - Chr7:78409310-78409329 None:intergenic 40.0%
! ATAGTGGGAATTGGAGGATT+GGG + Chr7:78409435-78409454 MsG0780040497.01.T01:CDS 40.0%
! ATCCACTTGCTTTCCGTTTT+AGG + Chr7:78409163-78409182 MsG0780040497.01.T01:CDS 40.0%
! GTACACCAATTTTGCAAGTG+TGG - Chr7:78409466-78409485 None:intergenic 40.0%
! GTTATTCCCATAGTGGGAAT+TGG + Chr7:78409426-78409445 MsG0780040497.01.T01:CDS 40.0%
!! ATGGATTTGAGTTGCAAGAC+AGG + Chr7:78409073-78409092 MsG0780040497.01.T01:CDS 40.0%
AATTGTCAGAGGTCTACTGC+TGG + Chr7:78408960-78408979 MsG0780040497.01.T01:CDS 45.0%
CAATCCTCCAATTCCCACTA+TGG - Chr7:78409436-78409455 None:intergenic 45.0%
CTGCCTTAACCATTCACACA+AGG - Chr7:78409016-78409035 None:intergenic 45.0%
GACGCTGAAGATGTATTGGA+TGG + Chr7:78409054-78409073 MsG0780040497.01.T01:CDS 45.0%
GATCCTCAAGGTTATGGCAA+TGG + Chr7:78409387-78409406 MsG0780040497.01.T01:CDS 45.0%
GATCGGAATCCATCAAAAGC+TGG - Chr7:78409371-78409390 None:intergenic 45.0%
GATTCCGATCCTCAAGGTTA+TGG + Chr7:78409381-78409400 MsG0780040497.01.T01:CDS 45.0%
GTGAGAATTCATGTTGAGCC+CGG + Chr7:78409258-78409277 MsG0780040497.01.T01:CDS 45.0%
TAGTGGGAATTGGAGGATTG+GGG + Chr7:78409436-78409455 MsG0780040497.01.T01:CDS 45.0%
TGACCATTGCCATAACCTTG+AGG - Chr7:78409393-78409412 None:intergenic 45.0%
TGGATAAAGTGGCAGCTGAT+GGG + Chr7:78409220-78409239 MsG0780040497.01.T01:CDS 45.0%
TTGGATAAAGTGGCAGCTGA+TGG + Chr7:78409219-78409238 MsG0780040497.01.T01:CDS 45.0%
! ATTCCCATAGTGGGAATTGG+AGG + Chr7:78409429-78409448 MsG0780040497.01.T01:CDS 45.0%
! CATAGTGGGAATTGGAGGAT+TGG + Chr7:78409434-78409453 MsG0780040497.01.T01:CDS 45.0%
!! TTGATGGATTCCGATCCTCA+AGG + Chr7:78409375-78409394 MsG0780040497.01.T01:CDS 45.0%
GAAGAAGCTTCTCGTGCCTA+TGG + Chr7:78408898-78408917 MsG0780040497.01.T01:CDS 50.0%
TCTCCTGTGCACAGAAAGTC+CGG - Chr7:78409280-78409299 None:intergenic 50.0%
! TGGAAGCTTCTGGAAGCACA+CGG + Chr7:78409109-78409128 MsG0780040497.01.T01:CDS 50.0%
! TTCTGGAAGCACACGGTTGA+AGG + Chr7:78409116-78409135 MsG0780040497.01.T01:CDS 50.0%
AGGTCTACTGCTGGATGCTG+AGG + Chr7:78408969-78408988 MsG0780040497.01.T01:CDS 55.0%
CTCCTGTGCACAGAAAGTCC+GGG - Chr7:78409279-78409298 None:intergenic 55.0%
GCAGCTGATGGGACCAAGTT+TGG + Chr7:78409231-78409250 MsG0780040497.01.T01:CDS 55.0%
AGCCCGGACTTTCTGTGCAC+AGG + Chr7:78409274-78409293 MsG0780040497.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78408826 78409494 78408826 ID=MsG0780040497.01;Name=MsG0780040497.01
Chr7 mRNA 78408826 78409494 78408826 ID=MsG0780040497.01.T01;Parent=MsG0780040497.01;Name=MsG0780040497.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|222
Chr7 exon 78408826 78409494 78408826 ID=MsG0780040497.01.T01:exon:203;Parent=MsG0780040497.01.T01
Chr7 CDS 78408826 78409494 78408826 ID=MsG0780040497.01.T01:cds;Parent=MsG0780040497.01.T01
Gene Sequence

>MsG0780040497.01.T01

ATGGATATGGTCGAATCATTTGTGTTTGATGTTGCTAATTCACTGTTAGGGAAACTTGCTTCTTATGCTTATGAAGAAGCTTCTCGTGCCTATGGTGTATATGAAGATCTCCAACGGATCAAAGATACTCTATCAATTGTCAGAGGTCTACTGCTGGATGCTGAGGAGAAAAAGAACCAACAACATGCCTTGTGTGAATGGTTAAGGCAGATTCAAAACATCTGCTATGACGCTGAAGATGTATTGGATGGATTTGAGTTGCAAGACAGGAGAAAGCAATTTTTGGAAGCTTCTGGAAGCACACGGTTGAAGGTATGCCACTTCTTTTCTTGCTCTAATCCACTTGCTTTCCGTTTTAGGATGTCACGTCAAATCAAAGAGATTAGAGATAGATTGGATAAAGTGGCAGCTGATGGGACCAAGTTTGGACTTGTGAGAATTCATGTTGAGCCCGGACTTTCTGTGCACAGGAGAGAAATCACCTATTCCCATGTTGATCCTTCAAGTGTAATAGGAAGGGAGAATGACAAGGAAGCAATTATCCAGCTTTTGATGGATTCCGATCCTCAAGGTTATGGCAATGGTCATAGAAGTTTATGTGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCAAAATTGGTGTACAATGAATAG

Protein sequence

>MsG0780040497.01.T01

MDMVESFVFDVANSLLGKLASYAYEEASRAYGVYEDLQRIKDTLSIVRGLLLDAEEKKNQQHALCEWLRQIQNICYDAEDVLDGFELQDRRKQFLEASGSTRLKVCHFFSCSNPLAFRFRMSRQIKEIRDRLDKVAADGTKFGLVRIHVEPGLSVHRREITYSHVDPSSVIGRENDKEAIIQLLMDSDPQGYGNGHRSLCVIPIVGIGGLGKTTLAKLVYNE*