AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010515.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010515.01.T01 MTR_2g086420 97.817 458 9 1 5 461 40 497 0.0 925
MsG0280010515.01.T01 MTR_2g086420 97.598 458 9 2 5 461 40 496 0.0 919
MsG0280010515.01.T01 MTR_4g053250 66.454 471 125 8 5 461 38 489 0.0 613
MsG0280010515.01.T01 MTR_8g040120 62.500 288 98 3 156 433 179 466 1.16e-124 370
MsG0280010515.01.T01 MTR_7g089800 59.272 302 112 3 142 433 123 423 1.25e-122 364
MsG0280010515.01.T01 MTR_7g089800 59.272 302 112 3 142 433 152 452 4.36e-122 363
MsG0280010515.01.T01 MTR_7g092750 53.416 322 130 3 132 433 41 362 4.98e-120 355
MsG0280010515.01.T01 MTR_7g092750 43.355 459 177 10 2 433 61 463 6.59e-120 358
MsG0280010515.01.T01 MTR_3g087940 54.452 292 121 4 151 433 73 361 4.66e-109 327
MsG0280010515.01.T01 MTR_5g054900 54.167 288 122 2 156 433 66 353 2.23e-105 317
MsG0280010515.01.T01 MTR_5g054900 54.167 288 122 2 156 433 147 434 1.50e-104 318
MsG0280010515.01.T01 MTR_5g054900 53.472 288 120 3 156 433 66 349 6.38e-102 308
MsG0280010515.01.T01 MTR_7g092750 39.869 459 167 11 2 433 61 437 8.55e-101 308
MsG0280010515.01.T01 MTR_5g054900 53.472 288 120 3 156 433 177 460 1.49e-100 308
MsG0280010515.01.T01 MTR_0126s0080 41.627 418 167 7 2 385 84 458 5.21e-99 305
MsG0280010515.01.T01 MTR_1g111310 47.573 309 147 3 136 433 403 707 4.40e-96 305
MsG0280010515.01.T01 MTR_1g111310 47.138 297 146 3 136 427 36 326 4.61e-85 276
MsG0280010515.01.T01 MTR_5g060950 49.839 311 145 4 130 430 37 346 8.99e-94 288
MsG0280010515.01.T01 MTR_8g091650 51.418 282 125 4 161 433 5 283 9.24e-91 277
MsG0280010515.01.T01 MTR_8g091650 51.228 285 127 4 158 433 75 356 9.47e-91 280
MsG0280010515.01.T01 MTR_8g091650 51.228 285 127 4 158 433 111 392 5.06e-90 279
MsG0280010515.01.T01 MTR_3g073560 50.519 289 128 3 158 435 65 349 4.85e-88 281
MsG0280010515.01.T01 MTR_3g044820 46.237 186 84 4 136 309 27 208 4.03e-55 183
MsG0280010515.01.T01 MTR_1g090370 32.828 198 112 5 234 426 47 228 3.65e-23 97.8
MsG0280010515.01.T01 MTR_1g111320 58.904 73 24 1 158 224 146 218 9.99e-18 82.4
MsG0280010515.01.T01 MTR_8g094690 27.500 240 125 6 225 421 15 248 2.95e-16 79.3
MsG0280010515.01.T01 MTR_7g068860 24.885 217 143 3 223 423 7 219 1.14e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010515.01.T01 AT1G08320 61.707 457 155 5 8 461 42 481 0.0 561
MsG0280010515.01.T01 AT1G08320 61.707 457 155 5 8 461 42 481 0.0 561
MsG0280010515.01.T01 AT1G08320 61.707 457 155 5 8 461 42 481 0.0 561
MsG0280010515.01.T01 AT1G08320 66.573 356 117 2 106 461 4 357 6.40e-177 499
MsG0280010515.01.T01 AT1G08320 66.573 356 117 2 106 461 4 357 6.40e-177 499
MsG0280010515.01.T01 AT5G06839 46.552 464 177 11 9 434 29 459 6.71e-122 363
MsG0280010515.01.T01 AT5G06839 58.228 316 108 4 143 434 101 416 1.13e-118 353
MsG0280010515.01.T01 AT3G12250 55.077 325 133 3 118 433 10 330 6.85e-118 348
MsG0280010515.01.T01 AT3G12250 55.077 325 133 3 118 433 10 330 6.85e-118 348
MsG0280010515.01.T01 AT3G12250 55.077 325 133 3 118 433 10 330 6.85e-118 348
MsG0280010515.01.T01 AT3G12250 55.077 325 133 3 118 433 10 330 6.85e-118 348
MsG0280010515.01.T01 AT5G06839 58.044 317 108 5 143 434 101 417 3.05e-117 350
MsG0280010515.01.T01 AT3G12250 58.000 300 114 3 146 433 4 303 1.45e-116 344
MsG0280010515.01.T01 AT3G12250 58.000 300 114 3 146 433 25 324 2.68e-116 344
MsG0280010515.01.T01 AT5G06950 57.333 300 116 3 146 433 31 330 5.12e-116 343
MsG0280010515.01.T01 AT5G06950 57.333 300 116 3 146 433 31 330 5.12e-116 343
MsG0280010515.01.T01 AT5G06950 57.333 300 116 3 146 433 31 330 5.12e-116 343
MsG0280010515.01.T01 AT5G06950 57.333 300 116 3 146 433 31 330 5.12e-116 343
MsG0280010515.01.T01 AT5G06950 57.333 300 116 3 146 433 31 330 5.12e-116 343
MsG0280010515.01.T01 AT3G12250 58.000 300 114 3 146 433 56 355 4.84e-115 342
MsG0280010515.01.T01 AT5G06960 59.028 288 109 2 155 433 43 330 9.10e-114 338
MsG0280010515.01.T01 AT5G06960 59.028 288 109 2 155 433 43 330 9.10e-114 338
MsG0280010515.01.T01 AT5G06960 59.028 288 109 2 155 433 23 310 1.62e-113 337
MsG0280010515.01.T01 AT1G22070 56.055 289 118 3 155 434 95 383 1.91e-103 313
MsG0280010515.01.T01 AT1G77920 49.112 338 141 5 99 433 57 366 2.20e-103 313
MsG0280010515.01.T01 AT5G10030 53.220 295 125 4 148 433 72 362 2.39e-101 307
MsG0280010515.01.T01 AT5G10030 53.220 295 125 4 148 433 72 362 2.39e-101 307
MsG0280010515.01.T01 AT5G10030 53.220 295 125 4 148 433 72 362 2.39e-101 307
MsG0280010515.01.T01 AT5G10030 53.220 295 125 4 148 433 72 362 2.39e-101 307
MsG0280010515.01.T01 AT5G10030 53.220 295 125 4 148 433 72 362 2.39e-101 307
MsG0280010515.01.T01 AT1G68640 54.762 294 118 5 153 433 161 452 2.18e-99 305
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 6 296 1.65e-96 293
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT5G65210 51.536 293 133 3 148 433 76 366 4.04e-96 294
MsG0280010515.01.T01 AT1G58330 26.244 221 148 4 218 423 3 223 2.03e-14 72.8

Find 98 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGGAAATGTTCCCTTCT+TGG 0.211576 2:+70807439 MsG0280010515.01.T01:CDS
GAAAATGTCAGTTGTTATCT+AGG 0.286466 2:+70813473 MsG0280010515.01.T01:three_prime_UTR
TTAGAGCTCTTAGTTCTCTT+TGG 0.292211 2:+70812986 MsG0280010515.01.T01:CDS
AAGCTGAACGTTGCTTCCTT+TGG 0.305878 2:+70810606 MsG0280010515.01.T01:CDS
ACTAGCTGAGCAGCAGATAA+TGG 0.309382 2:+70811717 MsG0280010515.01.T01:CDS
CAGCTAGTGGCTCCAATTGC+TGG 0.313572 2:-70811702 None:intergenic
TAGAGCTCTTAGTTCTCTTT+GGG 0.313649 2:+70812987 MsG0280010515.01.T01:CDS
GAAAAGTCGTCTAAGGAAAA+AGG 0.321473 2:+70808940 MsG0280010515.01.T01:CDS
ATCAGATCATAATAATAATA+TGG 0.322421 2:+70807812 MsG0280010515.01.T01:CDS
TACATTTACAATAAACATAA+AGG 0.322924 2:-70813540 None:intergenic
AATTGAAAAGGGTATGTTCA+TGG 0.336673 2:+70809226 MsG0280010515.01.T01:intron
CTAGCTGAGCAGCAGATAAT+GGG 0.344485 2:+70811718 MsG0280010515.01.T01:CDS
GCAATGTTTGACATGGAATA+TGG 0.352960 2:+70810395 MsG0280010515.01.T01:CDS
TCTCTTGTTGACACCATTGC+TGG 0.353849 2:+70811814 MsG0280010515.01.T01:CDS
TTTGCATATCCGTGGTTGTT+TGG 0.361993 2:-70813367 None:intergenic
TAGATTAAAGCTTACACAAT+TGG 0.368639 2:+70809088 MsG0280010515.01.T01:CDS
AAGGGTGATTCTTGCTCAAA+AGG 0.370182 2:-70807765 None:intergenic
TTACTACTGTTGAGGTTTGA+TGG 0.373913 2:-70807473 None:intergenic
CTTGTTATTGGAGAATACTA+TGG 0.375599 2:+70812958 MsG0280010515.01.T01:CDS
GCTGGAGGACCCCTTGTTGA+TGG 0.376451 2:+70811832 MsG0280010515.01.T01:CDS
TTCCAGTGTAGCAGCAGGTC+TGG 0.387739 2:-70807424 None:intergenic
GTCCTACAAGTGGTTCTTGT+TGG 0.388033 2:+70813441 MsG0280010515.01.T01:three_prime_UTR
TTTGTTAGGAATGAAGAATC+TGG 0.392918 2:+70806943 MsG0280010515.01.T01:CDS
TATTTCTCTTTAGCTAAAGT+TGG 0.401155 2:-70813594 None:intergenic
TGAGACGTTTAGCACAAAAC+AGG 0.401597 2:+70808906 MsG0280010515.01.T01:CDS
ATGGATTGGAGTGGAGGTGT+TGG 0.411382 2:+70809245 MsG0280010515.01.T01:CDS
GTGTGAGTAATCGACATAAT+TGG 0.411816 2:-70812912 None:intergenic
TCCTACAAGTGGTTCTTGTT+GGG 0.416938 2:+70813442 MsG0280010515.01.T01:three_prime_UTR
CGTTGCTTCCTTTGGATTGG+TGG 0.418885 2:+70810614 MsG0280010515.01.T01:CDS
TTCTTAACTCCGTTAATAAA+CGG 0.419059 2:-70810439 None:intergenic
CTGCAAGGAAAAGTCGTCTA+AGG 0.422741 2:+70808933 MsG0280010515.01.T01:CDS
GGCAAGCTTGCCAATCTTGA+AGG 0.422961 2:+70811880 MsG0280010515.01.T01:CDS
AGAAGACAACCGTTTATTAA+CGG 0.423518 2:+70810430 MsG0280010515.01.T01:CDS
ATCCAGACCTGCTGCTACAC+TGG 0.426810 2:+70807422 MsG0280010515.01.T01:CDS
TCAGATGTTGATCCAGCAAT+TGG 0.431974 2:+70811690 MsG0280010515.01.T01:intron
CAGGAAGGTGGTAACAAATC+AGG 0.441251 2:+70807699 MsG0280010515.01.T01:intron
GAACGTTGCTTCCTTTGGAT+TGG 0.451843 2:+70810611 MsG0280010515.01.T01:CDS
GACGTGTTTCATCTTATCAA+TGG 0.455217 2:+70810569 MsG0280010515.01.T01:CDS
CAGCAGATAATGGGGATGTA+TGG 0.463856 2:+70811727 MsG0280010515.01.T01:CDS
CAACAAATGGTTGTTGCCAT+AGG 0.467436 2:+70811859 MsG0280010515.01.T01:CDS
CAACAAGAGACTGTTGCAAC+TGG 0.468138 2:-70811801 None:intergenic
TAGACCCTCTGAAATTATCA+TGG 0.469132 2:+70810640 MsG0280010515.01.T01:CDS
AAGATTGGCAAGCTTGCCTA+TGG 0.469646 2:-70811875 None:intergenic
ACGAAGAAAACCTTCAAGAT+TGG 0.470177 2:-70811890 None:intergenic
AAAAGGGTATGTTCATGGAT+TGG 0.472621 2:+70809231 MsG0280010515.01.T01:intron
TGGAATCTCATTGGCCAAGA+AGG 0.473970 2:-70807453 None:intergenic
AGGGTGATTCTTGCTCAAAA+GGG 0.490521 2:-70807764 None:intergenic
ATGTTCATGGATTGGAGTGG+AGG 0.491384 2:+70809239 MsG0280010515.01.T01:CDS
TGTTGATGGTGTTCAACAAA+TGG 0.493901 2:+70811846 MsG0280010515.01.T01:CDS
GAGGTTTGATGGAATCTCAT+TGG 0.494784 2:-70807462 None:intergenic
GCCCAACAAGAACCACTTGT+AGG 0.495907 2:-70813443 None:intergenic
CATTCAAAGAGCACGCTCTC+AGG 0.496954 2:+70809118 MsG0280010515.01.T01:CDS
AACAACCACGGATATGCAAA+TGG 0.498862 2:+70813370 MsG0280010515.01.T01:CDS
GATTGGAGTGGAGGTGTTGG+AGG 0.501212 2:+70809248 MsG0280010515.01.T01:CDS
ATCAGCAGCAGCCAAAGAAA+AGG 0.524596 2:+70807929 MsG0280010515.01.T01:CDS
ATAAACACCTTTGCATCAAG+TGG 0.529769 2:-70808793 None:intergenic
ACTAACCATGATAATTTCAG+AGG 0.533906 2:-70810645 None:intergenic
GATCAAATGTTTAGACTCAA+AGG 0.541535 2:+70810530 MsG0280010515.01.T01:CDS
CACAAAACAGGGAGGCTGCA+AGG 0.543811 2:+70808918 MsG0280010515.01.T01:CDS
AACATTTCCAGTGTAGCAGC+AGG 0.549096 2:-70807429 None:intergenic
GTTGGAGGAAATATAAGCTC+TGG 0.554357 2:+70809263 MsG0280010515.01.T01:CDS
CTTGTTGACACCATTGCTGG+AGG 0.554730 2:+70811817 MsG0280010515.01.T01:CDS
ATTATCTGCTGCTCAGCTAG+TGG 0.557563 2:-70811715 None:intergenic
ATTACTCACACTTCGTCAAG+CGG 0.557736 2:+70812924 MsG0280010515.01.T01:CDS
AATTGAAGGCTGATAACTTG+AGG 0.558228 2:+70812875 MsG0280010515.01.T01:intron
TTATTAACGGAGTTAAGAAA+CGG 0.562286 2:+70810443 MsG0280010515.01.T01:CDS
GGAATCTCATTGGCCAAGAA+GGG 0.563800 2:-70807452 None:intergenic
AGATAAGCCACTTGATGCAA+AGG 0.567470 2:+70808786 MsG0280010515.01.T01:CDS
GTCTAAAACCACCAATCCAA+AGG 0.567699 2:-70810622 None:intergenic
AGAGAGTATTACTACTGTTG+AGG 0.572603 2:-70807481 None:intergenic
TTTGTGAAATGATTCTGAGA+AGG 0.574512 2:-70813398 None:intergenic
GCAGAGGAAGCTCTCTCACA+AGG 0.575222 2:+70811772 MsG0280010515.01.T01:CDS
AACAAGGGGTCCTCCAGCAA+TGG 0.575749 2:-70811827 None:intergenic
TTGACATGGAATATGGAAGA+TGG 0.583833 2:+70810402 MsG0280010515.01.T01:CDS
TTGAACCATTTGCATATCCG+TGG 0.584485 2:-70813375 None:intergenic
TTTGTTGAACACCATCAACA+AGG 0.585380 2:-70811843 None:intergenic
AGATAATGAAATGAGAGTAA+TGG 0.594040 2:+70810484 MsG0280010515.01.T01:CDS
TATTTGGAAATACAGGAAGG+TGG 0.595349 2:+70807687 MsG0280010515.01.T01:intron
TATTTGATTCTGTGATGAAG+AGG 0.598778 2:-70807907 None:intergenic
GAAATGAGAGTAATGGTGGA+TGG 0.599016 2:+70810491 MsG0280010515.01.T01:CDS
ATATATTTAACTTACTCTCG+TGG 0.607255 2:-70813018 None:intergenic
TTCATCTTATCAATGGCATG+TGG 0.610713 2:+70810576 MsG0280010515.01.T01:CDS
TAATGAAATGAGAGTAATGG+TGG 0.614982 2:+70810487 MsG0280010515.01.T01:CDS
TTGTTGAACACCATCAACAA+GGG 0.615909 2:-70811842 None:intergenic
GTTAAGAAACGGATTGCAAG+CGG 0.631491 2:+70810454 MsG0280010515.01.T01:CDS
TAGCTGAGCAGCAGATAATG+GGG 0.637774 2:+70811719 MsG0280010515.01.T01:CDS
ATGTATTAAAGTCCTACAAG+TGG 0.637890 2:+70813431 MsG0280010515.01.T01:three_prime_UTR
GCATTCTTCACAGCAAGCAG+AGG 0.646463 2:+70811756 MsG0280010515.01.T01:CDS
GAGACGTTTAGCACAAAACA+GGG 0.648005 2:+70808907 MsG0280010515.01.T01:CDS
AGGAGGTGCAATGTTTGACA+TGG 0.651643 2:+70810388 MsG0280010515.01.T01:intron
TGTTGAACACCATCAACAAG+GGG 0.659117 2:-70811841 None:intergenic
CTAACCATGATAATTTCAGA+GGG 0.659541 2:-70810644 None:intergenic
TGAGCTTTATGTGCATGATG+AGG 0.680307 2:+70813566 MsG0280010515.01.T01:three_prime_UTR
TAACTCATGCCAAACAACCA+CGG 0.685861 2:+70813358 MsG0280010515.01.T01:CDS
GAAGGTGGTAACAAATCAGG+AGG 0.695839 2:+70807702 MsG0280010515.01.T01:CDS
GGTATGTTCATGGATTGGAG+TGG 0.698181 2:+70809236 MsG0280010515.01.T01:CDS
TAATGGGGATGTATGGACTG+AGG 0.699689 2:+70811734 MsG0280010515.01.T01:CDS
ACGTTTAGCACAAAACAGGG+AGG 0.779708 2:+70808910 MsG0280010515.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAAGTTAATAGATT+AGG + Chr2:70807287-70807306 MsG0280010515.01.T01:intron 10.0%
!! ATTATATATTTACATTTAGT+TGG + Chr2:70813046-70813065 MsG0280010515.01.T01:intron 10.0%
!! GAATTATAAAAATATACAAT+AGG + Chr2:70809519-70809538 MsG0280010515.01.T01:intron 10.0%
!! GTATAGTTAAATAATTTAAT+CGG - Chr2:70807657-70807676 None:intergenic 10.0%
!! TAATAAAGGAATTATATTAT+GGG + Chr2:70810749-70810768 MsG0280010515.01.T01:intron 10.0%
!! TAATTAAAGATAAAGAAAAA+TGG - Chr2:70813254-70813273 None:intergenic 10.0%
!! TTAATAAAGGAATTATATTA+TGG + Chr2:70810748-70810767 MsG0280010515.01.T01:intron 10.0%
!! TTATTATTACTAAAAAAAAG+TGG - Chr2:70810050-70810069 None:intergenic 10.0%
!! TTATTGTATTAATAAATTGT+AGG + Chr2:70810368-70810387 MsG0280010515.01.T01:intron 10.0%
!!! ATTTTAACTTTTAATTGAAA+AGG + Chr2:70809214-70809233 MsG0280010515.01.T01:intron 10.0%
!!! CTTTTGTAAAAAAAAAAAAA+AGG + Chr2:70810075-70810094 MsG0280010515.01.T01:intron 10.0%
!!! GAGTTTATATATTTTAAAAA+AGG - Chr2:70809570-70809589 None:intergenic 10.0%
!!! TTTTAACTTTTAATTGAAAA+GGG + Chr2:70809215-70809234 MsG0280010515.01.T01:intron 10.0%
!! AATAAATTACTAGTAAATGA+TGG - Chr2:70809364-70809383 None:intergenic 15.0%
!! ACAAAATAAATTGTAACAAA+CGG + Chr2:70811076-70811095 MsG0280010515.01.T01:intron 15.0%
!! ATCAGATCATAATAATAATA+TGG + Chr2:70807812-70807831 MsG0280010515.01.T01:CDS 15.0%
!! GTGAATATAACAAAATAAAT+TGG - Chr2:70813316-70813335 None:intergenic 15.0%
!! TAAGCATAATTAAAATAGAT+TGG - Chr2:70807515-70807534 None:intergenic 15.0%
!! TAATCACAAGAAATTAAATT+TGG + Chr2:70810194-70810213 MsG0280010515.01.T01:intron 15.0%
!! TACATTTACAATAAACATAA+AGG - Chr2:70813543-70813562 None:intergenic 15.0%
!! TTGTAAAAAAAAAAAAAAGG+AGG + Chr2:70810078-70810097 MsG0280010515.01.T01:intron 15.0%
!! TTTACCAAAATAATTGTAAA+AGG - Chr2:70807331-70807350 None:intergenic 15.0%
!!! AAATTTAAAGCCTTTTATTT+TGG + Chr2:70807351-70807370 MsG0280010515.01.T01:intron 15.0%
!!! AATACCTTTTACAATTATTT+TGG + Chr2:70807324-70807343 MsG0280010515.01.T01:intron 15.0%
!!! AGTTATTTATTCATAGATTT+TGG - Chr2:70809490-70809509 None:intergenic 15.0%
!!! GTTGAAATACATTTTAATTA+TGG + Chr2:70813094-70813113 MsG0280010515.01.T01:intron 15.0%
!!! TTTACATTTTGATATTATGT+CGG - Chr2:70810296-70810315 None:intergenic 15.0%
!!! TTTTTTTTGTTGTAGAAAAA+AGG + Chr2:70808748-70808767 MsG0280010515.01.T01:intron 15.0%
!! AAAAGCCAAAGTATATATAA+AGG - Chr2:70809991-70810010 None:intergenic 20.0%
!! AAAATGTTTCATTCAAAAGT+TGG + Chr2:70812508-70812527 MsG0280010515.01.T01:intron 20.0%
!! AATGTGAAACTTCTTAATAA+AGG + Chr2:70810735-70810754 MsG0280010515.01.T01:intron 20.0%
!! CAAAATAAATTGTAACAAAC+GGG + Chr2:70811077-70811096 MsG0280010515.01.T01:intron 20.0%
!! GTATCTATATCTATATGTAT+AGG - Chr2:70808975-70808994 None:intergenic 20.0%
!! TAGTTTATACATGATAGAAA+AGG - Chr2:70809611-70809630 None:intergenic 20.0%
!! TTAATGAATGAAATCAATGT+TGG + Chr2:70811244-70811263 MsG0280010515.01.T01:intron 20.0%
!! TTGTATTAATAAATTGTAGG+AGG + Chr2:70810371-70810390 MsG0280010515.01.T01:intron 20.0%
!!! AAAAAATGCACTTTAAGAAA+AGG + Chr2:70810136-70810155 MsG0280010515.01.T01:intron 20.0%
!!! AAAAGAGTGTGTATTATAAA+GGG - Chr2:70811222-70811241 None:intergenic 20.0%
!!! AGTGATTATGTTAGTTTTTA+GGG - Chr2:70812667-70812686 None:intergenic 20.0%
!!! AGTTTAGTTTACATTTTGTT+GGG + Chr2:70809288-70809307 MsG0280010515.01.T01:intron 20.0%
!!! ATACTTTTGAACATAAACAT+TGG - Chr2:70809545-70809564 None:intergenic 20.0%
!!! CATTCATATTTTTCAATTGA+AGG + Chr2:70812861-70812880 MsG0280010515.01.T01:intron 20.0%
!!! CATTGTTTCGAATTATTTTT+TGG + Chr2:70809839-70809858 MsG0280010515.01.T01:intron 20.0%
!!! CTATACTAATGATTTGTATT+TGG + Chr2:70807671-70807690 MsG0280010515.01.T01:intron 20.0%
!!! GCATTATTTTAATTGAATCA+AGG - Chr2:70807619-70807638 None:intergenic 20.0%
!!! TAAAAGAGTGTGTATTATAA+AGG - Chr2:70811223-70811242 None:intergenic 20.0%
!!! TAATGTGAATGTTGATAATT+TGG + Chr2:70811662-70811681 MsG0280010515.01.T01:intron 20.0%
!!! TAGTGATTATGTTAGTTTTT+AGG - Chr2:70812668-70812687 None:intergenic 20.0%
!!! TTATTTTGTTATATTCACAC+AGG + Chr2:70813318-70813337 MsG0280010515.01.T01:intron 20.0%
!!! TTGAATGAAACATTTTAAGA+TGG - Chr2:70812504-70812523 None:intergenic 20.0%
!!! TTTACTATTAACCTTTTCTT+TGG - Chr2:70807943-70807962 None:intergenic 20.0%
!!! TTTTTAACAACTTGTAACAA+AGG + Chr2:70810983-70811002 MsG0280010515.01.T01:intron 20.0%
! AAAAAAGTGAGTGTCATATT+GGG + Chr2:70811309-70811328 MsG0280010515.01.T01:intron 25.0%
! AAAGTCAAAACTTGATCTTA+TGG + Chr2:70809426-70809445 MsG0280010515.01.T01:intron 25.0%
! AAGAAACAGTTCACAAAAAA+TGG + Chr2:70808407-70808426 MsG0280010515.01.T01:intron 25.0%
! AAGTCAAAACTTGATCTTAT+GGG + Chr2:70809427-70809446 MsG0280010515.01.T01:intron 25.0%
! ACTTTATATTTCAGCAGTTA+TGG - Chr2:70807278-70807297 None:intergenic 25.0%
! AGATAATGAAATGAGAGTAA+TGG + Chr2:70810484-70810503 MsG0280010515.01.T01:CDS 25.0%
! AGCAAAATTATAACACCATT+TGG - Chr2:70813196-70813215 None:intergenic 25.0%
! AGCAATATTCAAACTATATG+TGG - Chr2:70812017-70812036 None:intergenic 25.0%
! AGTCTCCTTTATATATACTT+TGG + Chr2:70809983-70810002 MsG0280010515.01.T01:intron 25.0%
! ATAGATCACAAGGAAATAAT+GGG - Chr2:70812083-70812102 None:intergenic 25.0%
! ATGTTCATGTTTATATGCTA+AGG + Chr2:70808858-70808877 MsG0280010515.01.T01:intron 25.0%
! CAAAATTTCCCTTAGTTTAT+GGG - Chr2:70808024-70808043 None:intergenic 25.0%
! CAGATAATAAAATGTTAGGT+AGG - Chr2:70812150-70812169 None:intergenic 25.0%
! CATATTAATTGTGATGAGTT+TGG - Chr2:70810342-70810361 None:intergenic 25.0%
! GAAAGAAAGAAAAAAAGCAA+AGG + Chr2:70807122-70807141 MsG0280010515.01.T01:intron 25.0%
! GCAATAATTTACTGTTACAT+TGG - Chr2:70811594-70811613 None:intergenic 25.0%
! GTACCAGATAATAAAATGTT+AGG - Chr2:70812154-70812173 None:intergenic 25.0%
! TAAAAAAGTGAGTGTCATAT+TGG + Chr2:70811308-70811327 MsG0280010515.01.T01:intron 25.0%
! TAGATTAAAGCTTACACAAT+TGG + Chr2:70809088-70809107 MsG0280010515.01.T01:CDS 25.0%
! TATTTCTCTTTAGCTAAAGT+TGG - Chr2:70813597-70813616 None:intergenic 25.0%
! TCAGTAAAAATCATGCAAAA+GGG - Chr2:70807253-70807272 None:intergenic 25.0%
! TTAATTTCATGCATGTTTGT+AGG + Chr2:70813072-70813091 MsG0280010515.01.T01:intron 25.0%
! TTATTAACGGAGTTAAGAAA+CGG + Chr2:70810443-70810462 MsG0280010515.01.T01:CDS 25.0%
! TTCTTAACTCCGTTAATAAA+CGG - Chr2:70810442-70810461 None:intergenic 25.0%
! TTGAATTTGTACTATCTTCT+TGG + Chr2:70808064-70808083 MsG0280010515.01.T01:intron 25.0%
! TTTCTTGTGATTAAACAAAG+TGG - Chr2:70810187-70810206 None:intergenic 25.0%
!! AAAGAGTGTGTATTATAAAG+GGG - Chr2:70811221-70811240 None:intergenic 25.0%
!! AATCATTATGGTATTGGAAA+TGG - Chr2:70807177-70807196 None:intergenic 25.0%
!! ATATAAAAGCTGCTTTCAAA+GGG + Chr2:70809632-70809651 MsG0280010515.01.T01:intron 25.0%
!! ATATATTTAACTTACTCTCG+TGG - Chr2:70813021-70813040 None:intergenic 25.0%
!! CTACCTAACATTTTATTATC+TGG + Chr2:70812148-70812167 MsG0280010515.01.T01:intron 25.0%
!! TATATAAAAGCTGCTTTCAA+AGG + Chr2:70809631-70809650 MsG0280010515.01.T01:intron 25.0%
!! TGATTTGTATTTGGAAATAC+AGG + Chr2:70807680-70807699 MsG0280010515.01.T01:intron 25.0%
!! TTACACACTAATTTGCATTA+AGG + Chr2:70811632-70811651 MsG0280010515.01.T01:intron 25.0%
!! TTTCAACTATTTTCCCTTAT+TGG + Chr2:70812798-70812817 MsG0280010515.01.T01:intron 25.0%
!! TTTCAAGTGTAGAACAAAAA+TGG - Chr2:70808672-70808691 None:intergenic 25.0%
!!! AAGAATCTGGTTTTGATTTT+GGG + Chr2:70806956-70806975 MsG0280010515.01.T01:CDS 25.0%
!!! AGAAGATGCTTTTTTACTTA+AGG - Chr2:70807787-70807806 None:intergenic 25.0%
!!! CTCATTGCATTTTTTTTTAC+AGG + Chr2:70809040-70809059 MsG0280010515.01.T01:intron 25.0%
!!! CTTTTTTGCAATTTGAATCA+AGG + Chr2:70812039-70812058 MsG0280010515.01.T01:intron 25.0%
!!! GAAGATGCTTTTTTACTTAA+GGG - Chr2:70807786-70807805 None:intergenic 25.0%
!!! GAGTTTAGTTTACATTTTGT+TGG + Chr2:70809287-70809306 MsG0280010515.01.T01:intron 25.0%
!!! GTTTAGTTTACATTTTGTTG+GGG + Chr2:70809289-70809308 MsG0280010515.01.T01:intron 25.0%
!!! TACTTTTTAATCATCTGTTC+TGG + Chr2:70813515-70813534 MsG0280010515.01.T01:three_prime_UTR 25.0%
!!! TTGATTTTCTGAAATCTGTT+GGG - Chr2:70808111-70808130 None:intergenic 25.0%
!!! TTTGATTTTCTGAAATCTGT+TGG - Chr2:70808112-70808131 None:intergenic 25.0%
!!! TTTTTGTGAACTGTTTCTTT+AGG - Chr2:70808406-70808425 None:intergenic 25.0%
AAAAAGTGAGTGTCATATTG+GGG + Chr2:70811310-70811329 MsG0280010515.01.T01:intron 30.0%
AATAAAGCAGTAGCTAGTAT+AGG + Chr2:70812708-70812727 MsG0280010515.01.T01:intron 30.0%
AATGGTTAAACAAATGAGTG+AGG - Chr2:70808654-70808673 None:intergenic 30.0%
ACTAACCATGATAATTTCAG+AGG - Chr2:70810648-70810667 None:intergenic 30.0%
AGAAGACAACCGTTTATTAA+CGG + Chr2:70810430-70810449 MsG0280010515.01.T01:CDS 30.0%
AGAGGATCAACCAAAATAAA+AGG - Chr2:70807364-70807383 None:intergenic 30.0%
AGATAAGCAATAAGCCAATA+AGG - Chr2:70812815-70812834 None:intergenic 30.0%
AGTAGTTAACTCATTTCTTG+AGG + Chr2:70812603-70812622 MsG0280010515.01.T01:intron 30.0%
ATGGTTAAACAAATGAGTGA+GGG - Chr2:70808653-70808672 None:intergenic 30.0%
ATGTATTAAAGTCCTACAAG+TGG + Chr2:70813431-70813450 MsG0280010515.01.T01:three_prime_UTR 30.0%
ATGTGATATGGATAGCAAAA+TGG - Chr2:70808444-70808463 None:intergenic 30.0%
ATTGCATTCCTACTGAAAAA+TGG + Chr2:70808472-70808491 MsG0280010515.01.T01:intron 30.0%
CAATCATCTTCAATGTGATA+TGG - Chr2:70808456-70808475 None:intergenic 30.0%
CATAGATCACAAGGAAATAA+TGG - Chr2:70812084-70812103 None:intergenic 30.0%
CCAAAATTTCCCTTAGTTTA+TGG - Chr2:70808025-70808044 None:intergenic 30.0%
CCCTTAAATTCAATCAAGAT+CGG - Chr2:70812194-70812213 None:intergenic 30.0%
CCGATCTTGATTGAATTTAA+GGG + Chr2:70812191-70812210 MsG0280010515.01.T01:intron 30.0%
CCTTAAATTCAATCAAGATC+GGG - Chr2:70812193-70812212 None:intergenic 30.0%
CTAACCATGATAATTTCAGA+GGG - Chr2:70810647-70810666 None:intergenic 30.0%
CTATGAGTTAGCAACATAAT+TGG - Chr2:70812389-70812408 None:intergenic 30.0%
CTGCAAAAGAAATATTCAAG+TGG - Chr2:70809660-70809679 None:intergenic 30.0%
GAAAATGTCAGTTGTTATCT+AGG + Chr2:70813473-70813492 MsG0280010515.01.T01:three_prime_UTR 30.0%
GATAAGCAATAAGCCAATAA+GGG - Chr2:70812814-70812833 None:intergenic 30.0%
GATATAACAACGTACATTTG+TGG - Chr2:70812128-70812147 None:intergenic 30.0%
GATCAAATGTTTAGACTCAA+AGG + Chr2:70810530-70810549 MsG0280010515.01.T01:CDS 30.0%
GGTTACGTTTAGACATAAAT+AGG + Chr2:70811467-70811486 MsG0280010515.01.T01:intron 30.0%
GTCAGTAAAAATCATGCAAA+AGG - Chr2:70807254-70807273 None:intergenic 30.0%
TAACAACTTGTAACAAAGGA+TGG + Chr2:70810987-70811006 MsG0280010515.01.T01:intron 30.0%
TAATGAAATGAGAGTAATGG+TGG + Chr2:70810487-70810506 MsG0280010515.01.T01:CDS 30.0%
TATTTGATTCTGTGATGAAG+AGG - Chr2:70807910-70807929 None:intergenic 30.0%
TCATCAAAGAAAAATCTGAG+AGG - Chr2:70807382-70807401 None:intergenic 30.0%
TTAAATTACCTCCACTACTT+TGG + Chr2:70812346-70812365 MsG0280010515.01.T01:intron 30.0%
TTATTTCCTTGTGATCTATG+TGG + Chr2:70812084-70812103 MsG0280010515.01.T01:intron 30.0%
TTCCATATCCCATAAACTAA+GGG + Chr2:70808013-70808032 MsG0280010515.01.T01:intron 30.0%
TTGTATTTGGAAATACAGGA+AGG + Chr2:70807684-70807703 MsG0280010515.01.T01:intron 30.0%
TTTCCATATCCCATAAACTA+AGG + Chr2:70808012-70808031 MsG0280010515.01.T01:intron 30.0%
TTTGTTAGGAATGAAGAATC+TGG + Chr2:70806943-70806962 MsG0280010515.01.T01:CDS 30.0%
! AATTGAAAAGGGTATGTTCA+TGG + Chr2:70809226-70809245 MsG0280010515.01.T01:intron 30.0%
! CAACTCTTTCTAAAAGTAGA+GGG + Chr2:70807100-70807119 MsG0280010515.01.T01:intron 30.0%
! CCATAAACTAAGGGAAATTT+TGG + Chr2:70808022-70808041 MsG0280010515.01.T01:intron 30.0%
! GATATTTTTCATGTGCCAAA+TGG + Chr2:70813178-70813197 MsG0280010515.01.T01:intron 30.0%
! TCATGTCATCTTTTTGTTCT+TGG + Chr2:70808545-70808564 MsG0280010515.01.T01:intron 30.0%
! TCTAAGGTCAGAAAAAAAAG+TGG - Chr2:70807070-70807089 None:intergenic 30.0%
! TGAATATTTCTTTTGCAGCT+TGG + Chr2:70809662-70809681 MsG0280010515.01.T01:intron 30.0%
! TTTGTGAAATGATTCTGAGA+AGG - Chr2:70813401-70813420 None:intergenic 30.0%
! TTTTGCAGCTTGGATTAATT+TGG + Chr2:70809672-70809691 MsG0280010515.01.T01:intron 30.0%
!! AATTTGGCTCTCTATCTTTA+GGG + Chr2:70809688-70809707 MsG0280010515.01.T01:intron 30.0%
!! CTTGTTATTGGAGAATACTA+TGG + Chr2:70812958-70812977 MsG0280010515.01.T01:CDS 30.0%
!! TAATTTGGCTCTCTATCTTT+AGG + Chr2:70809687-70809706 MsG0280010515.01.T01:intron 30.0%
!!! AAGTTGGTTTTAGAAAGTGA+TGG + Chr2:70812524-70812543 MsG0280010515.01.T01:intron 30.0%
!!! AGAATCTGGTTTTGATTTTG+GGG + Chr2:70806957-70806976 MsG0280010515.01.T01:CDS 30.0%
!!! GAAGAATCTGGTTTTGATTT+TGG + Chr2:70806955-70806974 MsG0280010515.01.T01:CDS 30.0%
AAAAAGCCAGTGCAATAATG+TGG - Chr2:70810231-70810250 None:intergenic 35.0%
AATTGAAGGCTGATAACTTG+AGG + Chr2:70812875-70812894 MsG0280010515.01.T01:intron 35.0%
ACGAAGAAAACCTTCAAGAT+TGG - Chr2:70811893-70811912 None:intergenic 35.0%
AGCACCTAAAATCTCATAGA+GGG + Chr2:70809957-70809976 MsG0280010515.01.T01:intron 35.0%
ATAAACACCTTTGCATCAAG+TGG - Chr2:70808796-70808815 None:intergenic 35.0%
CATCATGTTGCTCAAAAGTT+AGG + Chr2:70812456-70812475 MsG0280010515.01.T01:intron 35.0%
CCAATACCATAATGATTCTG+AGG + Chr2:70807180-70807199 MsG0280010515.01.T01:intron 35.0%
CCCGATCTTGATTGAATTTA+AGG + Chr2:70812190-70812209 MsG0280010515.01.T01:intron 35.0%
CCTACTGAAAAATGGTCAAA+TGG + Chr2:70808480-70808499 MsG0280010515.01.T01:intron 35.0%
CCTCAGAATCATTATGGTAT+TGG - Chr2:70807183-70807202 None:intergenic 35.0%
CTATTGCCTCAGAATCATTA+TGG - Chr2:70807189-70807208 None:intergenic 35.0%
GAAAAGTCGTCTAAGGAAAA+AGG + Chr2:70808940-70808959 MsG0280010515.01.T01:CDS 35.0%
GACGTGTTTCATCTTATCAA+TGG + Chr2:70810569-70810588 MsG0280010515.01.T01:CDS 35.0%
GCAATGTTTGACATGGAATA+TGG + Chr2:70810395-70810414 MsG0280010515.01.T01:CDS 35.0%
GGAAATGAGCAGTATCATAA+TGG - Chr2:70810029-70810048 None:intergenic 35.0%
GGCACTATAATAATACGATG+AGG + Chr2:70809710-70809729 MsG0280010515.01.T01:intron 35.0%
GTGTGAGTAATCGACATAAT+TGG - Chr2:70812915-70812934 None:intergenic 35.0%
TAATTGAATCAAGGCGACAA+GGG - Chr2:70807610-70807629 None:intergenic 35.0%
TATTTGGAAATACAGGAAGG+TGG + Chr2:70807687-70807706 MsG0280010515.01.T01:intron 35.0%
TCATATTGGGGTGTATAAGA+TGG + Chr2:70811322-70811341 MsG0280010515.01.T01:intron 35.0%
TGCTCAAAAGTTAGGTCATA+AGG + Chr2:70812464-70812483 MsG0280010515.01.T01:intron 35.0%
TTAATTGAATCAAGGCGACA+AGG - Chr2:70807611-70807630 None:intergenic 35.0%
TTACTACTGTTGAGGTTTGA+TGG - Chr2:70807476-70807495 None:intergenic 35.0%
TTCATCTTATCAATGGCATG+TGG + Chr2:70810576-70810595 MsG0280010515.01.T01:CDS 35.0%
TTCATGTCAGAAAATCGTTC+AGG - Chr2:70808157-70808176 None:intergenic 35.0%
TTCCCTTAGTTTATGGGATA+TGG - Chr2:70808018-70808037 None:intergenic 35.0%
TTGACATGGAATATGGAAGA+TGG + Chr2:70810402-70810421 MsG0280010515.01.T01:CDS 35.0%
TTGTTGAACACCATCAACAA+GGG - Chr2:70811845-70811864 None:intergenic 35.0%
TTGTTGTAGAAAAAAGGAGC+TGG + Chr2:70808754-70808773 MsG0280010515.01.T01:intron 35.0%
TTTGTTGAACACCATCAACA+AGG - Chr2:70811846-70811865 None:intergenic 35.0%
! AAAAGGGTATGTTCATGGAT+TGG + Chr2:70809231-70809250 MsG0280010515.01.T01:intron 35.0%
! CCAACTCTTTCTAAAAGTAG+AGG + Chr2:70807099-70807118 MsG0280010515.01.T01:intron 35.0%
! CTAACTTTTGAGCAACATGA+TGG - Chr2:70812458-70812477 None:intergenic 35.0%
! GAGTTGGTTATGCTTATCTA+AGG - Chr2:70807086-70807105 None:intergenic 35.0%
! GTTTTGCAAGGAGTTAAGAA+TGG + Chr2:70806997-70807016 MsG0280010515.01.T01:CDS 35.0%
! TAGAGCTCTTAGTTCTCTTT+GGG + Chr2:70812987-70813006 MsG0280010515.01.T01:CDS 35.0%
! TTAGAGCTCTTAGTTCTCTT+TGG + Chr2:70812986-70813005 MsG0280010515.01.T01:CDS 35.0%
!! AGAGAGTATTACTACTGTTG+AGG - Chr2:70807484-70807503 None:intergenic 35.0%
!! ATTTGGCTCTCTATCTTTAG+GGG + Chr2:70809689-70809708 MsG0280010515.01.T01:intron 35.0%
!! CCATTTGACCATTTTTCAGT+AGG - Chr2:70808483-70808502 None:intergenic 35.0%
!! CCTCTACTTTTAGAAAGAGT+TGG - Chr2:70807102-70807121 None:intergenic 35.0%
!! CTGAAAGAGCTTTGTCTTTT+AGG + Chr2:70812635-70812654 MsG0280010515.01.T01:intron 35.0%
!! GAAGAAGCAATTGTTTTGCA+AGG + Chr2:70806985-70807004 MsG0280010515.01.T01:CDS 35.0%
!! TAGACCCTCTGAAATTATCA+TGG + Chr2:70810640-70810659 MsG0280010515.01.T01:CDS 35.0%
!! TGATATTATGTCGGCTGTTT+TGG - Chr2:70810287-70810306 None:intergenic 35.0%
!! TGTTGATGGTGTTCAACAAA+TGG + Chr2:70811846-70811865 MsG0280010515.01.T01:CDS 35.0%
!!! ACTGGCTTTTTTTTTTGACG+GGG + Chr2:70810240-70810259 MsG0280010515.01.T01:intron 35.0%
!!! CACTGGCTTTTTTTTTTGAC+GGG + Chr2:70810239-70810258 MsG0280010515.01.T01:intron 35.0%
!!! GCACTGGCTTTTTTTTTTGA+CGG + Chr2:70810238-70810257 MsG0280010515.01.T01:intron 35.0%
AACAACCACGGATATGCAAA+TGG + Chr2:70813370-70813389 MsG0280010515.01.T01:CDS 40.0%
AAGGGTGATTCTTGCTCAAA+AGG - Chr2:70807768-70807787 None:intergenic 40.0%
AATCATGCAAAAGGGTAGTG+AGG - Chr2:70807245-70807264 None:intergenic 40.0%
AGATAAGCCACTTGATGCAA+AGG + Chr2:70808786-70808805 MsG0280010515.01.T01:CDS 40.0%
AGGGTGATTCTTGCTCAAAA+GGG - Chr2:70807767-70807786 None:intergenic 40.0%
ATTACTCACACTTCGTCAAG+CGG + Chr2:70812924-70812943 MsG0280010515.01.T01:CDS 40.0%
CAACAAATGGTTGTTGCCAT+AGG + Chr2:70811859-70811878 MsG0280010515.01.T01:CDS 40.0%
CAGAAAATCGTTCAGGAATC+AGG - Chr2:70808150-70808169 None:intergenic 40.0%
CTTATGAGAAAGTGACGTTG+TGG - Chr2:70811532-70811551 None:intergenic 40.0%
GAGACGTTTAGCACAAAACA+GGG + Chr2:70808907-70808926 MsG0280010515.01.T01:CDS 40.0%
GAGCACCTAAAATCTCATAG+AGG + Chr2:70809956-70809975 MsG0280010515.01.T01:intron 40.0%
GAGGTTTGATGGAATCTCAT+TGG - Chr2:70807465-70807484 None:intergenic 40.0%
GTTGGAGGAAATATAAGCTC+TGG + Chr2:70809263-70809282 MsG0280010515.01.T01:CDS 40.0%
GTTGTCATATGTCAGTTGTG+TGG + Chr2:70811551-70811570 MsG0280010515.01.T01:intron 40.0%
TAACTCATGCCAAACAACCA+CGG + Chr2:70813358-70813377 MsG0280010515.01.T01:CDS 40.0%
TCAGATGTTGATCCAGCAAT+TGG + Chr2:70811690-70811709 MsG0280010515.01.T01:intron 40.0%
TCCTACAAGTGGTTCTTGTT+GGG + Chr2:70813442-70813461 MsG0280010515.01.T01:three_prime_UTR 40.0%
TGAGACGTTTAGCACAAAAC+AGG + Chr2:70808906-70808925 MsG0280010515.01.T01:CDS 40.0%
TGTTGAACACCATCAACAAG+GGG - Chr2:70811844-70811863 None:intergenic 40.0%
TTGAACCATTTGCATATCCG+TGG - Chr2:70813378-70813397 None:intergenic 40.0%
TTTGCATATCCGTGGTTGTT+TGG - Chr2:70813370-70813389 None:intergenic 40.0%
TTTGGTGAAGAAAGAGCTTG+TGG + Chr2:70811446-70811465 MsG0280010515.01.T01:intron 40.0%
! GAAATGAGAGTAATGGTGGA+TGG + Chr2:70810491-70810510 MsG0280010515.01.T01:CDS 40.0%
! GTCTAAAACCACCAATCCAA+AGG - Chr2:70810625-70810644 None:intergenic 40.0%
! TCTTGAAGGTTTTCTTCGTC+AGG + Chr2:70811894-70811913 MsG0280010515.01.T01:CDS 40.0%
! TGAGCTTTATGTGCATGATG+AGG + Chr2:70813566-70813585 MsG0280010515.01.T01:three_prime_UTR 40.0%
! TGTGCCCTCTATGAGATTTT+AGG - Chr2:70809964-70809983 None:intergenic 40.0%
!! GATTCTGAGGCAATAGACAT+GGG + Chr2:70807193-70807212 MsG0280010515.01.T01:intron 40.0%
!! GCACGCTCTTTTCTTGTTAT+TGG + Chr2:70812946-70812965 MsG0280010515.01.T01:CDS 40.0%
!! GTTAAGAAACGGATTGCAAG+CGG + Chr2:70810454-70810473 MsG0280010515.01.T01:CDS 40.0%
!! TGATTCTGAGGCAATAGACA+TGG + Chr2:70807192-70807211 MsG0280010515.01.T01:intron 40.0%
AACATTTCCAGTGTAGCAGC+AGG - Chr2:70807432-70807451 None:intergenic 45.0%
AAGATTGGCAAGCTTGCCTA+TGG - Chr2:70811878-70811897 None:intergenic 45.0%
AAGCTGAACGTTGCTTCCTT+TGG + Chr2:70810606-70810625 MsG0280010515.01.T01:CDS 45.0%
AAGGTGTGGGGTTACAAACT+TGG + Chr2:70807216-70807235 MsG0280010515.01.T01:intron 45.0%
ACGTTTAGCACAAAACAGGG+AGG + Chr2:70808910-70808929 MsG0280010515.01.T01:CDS 45.0%
ACTAGCTGAGCAGCAGATAA+TGG + Chr2:70811717-70811736 MsG0280010515.01.T01:CDS 45.0%
AGAGAGAGAGAGTGAACGAT+AGG + Chr2:70808225-70808244 MsG0280010515.01.T01:intron 45.0%
ATCAGCAGCAGCCAAAGAAA+AGG + Chr2:70807929-70807948 MsG0280010515.01.T01:CDS 45.0%
ATGCAGCCACATAGATCACA+AGG - Chr2:70812093-70812112 None:intergenic 45.0%
ATTATCTGCTGCTCAGCTAG+TGG - Chr2:70811718-70811737 None:intergenic 45.0%
CAACAAGAGACTGTTGCAAC+TGG - Chr2:70811804-70811823 None:intergenic 45.0%
CACTGGAAATGTTCCCTTCT+TGG + Chr2:70807439-70807458 MsG0280010515.01.T01:CDS 45.0%
CAGGAAGGTGGTAACAAATC+AGG + Chr2:70807699-70807718 MsG0280010515.01.T01:intron 45.0%
CTAGCTGAGCAGCAGATAAT+GGG + Chr2:70811718-70811737 MsG0280010515.01.T01:CDS 45.0%
CTGCAAGGAAAAGTCGTCTA+AGG + Chr2:70808933-70808952 MsG0280010515.01.T01:CDS 45.0%
GAACGTTGCTTCCTTTGGAT+TGG + Chr2:70810611-70810630 MsG0280010515.01.T01:CDS 45.0%
GAAGGTGGTAACAAATCAGG+AGG + Chr2:70807702-70807721 MsG0280010515.01.T01:CDS 45.0%
GGAATCTCATTGGCCAAGAA+GGG - Chr2:70807455-70807474 None:intergenic 45.0%
GTCCTACAAGTGGTTCTTGT+TGG + Chr2:70813441-70813460 MsG0280010515.01.T01:three_prime_UTR 45.0%
TAGCTGAGCAGCAGATAATG+GGG + Chr2:70811719-70811738 MsG0280010515.01.T01:CDS 45.0%
TCCTTGCCACATTATTGCAC+TGG + Chr2:70810222-70810241 MsG0280010515.01.T01:intron 45.0%
TCTCTTGTTGACACCATTGC+TGG + Chr2:70811814-70811833 MsG0280010515.01.T01:CDS 45.0%
TGACGTGACAACCAAAGTAG+TGG - Chr2:70812360-70812379 None:intergenic 45.0%
TGGAATCTCATTGGCCAAGA+AGG - Chr2:70807456-70807475 None:intergenic 45.0%
! AATAGACATGGGAAGGTGTG+GGG + Chr2:70807204-70807223 MsG0280010515.01.T01:intron 45.0%
! AGGAGGTGCAATGTTTGACA+TGG + Chr2:70810388-70810407 MsG0280010515.01.T01:intron 45.0%
! CAATAGACATGGGAAGGTGT+GGG + Chr2:70807203-70807222 MsG0280010515.01.T01:intron 45.0%
! TAATGGGGATGTATGGACTG+AGG + Chr2:70811734-70811753 MsG0280010515.01.T01:CDS 45.0%
!! ATGTTCATGGATTGGAGTGG+AGG + Chr2:70809239-70809258 MsG0280010515.01.T01:CDS 45.0%
!! CAGCAGATAATGGGGATGTA+TGG + Chr2:70811727-70811746 MsG0280010515.01.T01:CDS 45.0%
!! GGTATGTTCATGGATTGGAG+TGG + Chr2:70809236-70809255 MsG0280010515.01.T01:CDS 45.0%
!! AATTAAATAAAACTTATATA+TGG + Chr2:70808720-70808739 MsG0280010515.01.T01:intron 5.0%
!! TTAATTACAAATTAATTATA+TGG - Chr2:70810691-70810710 None:intergenic 5.0%
!!! AGTTTTTTTTTTTTTTTTTT+TGG + Chr2:70811428-70811447 MsG0280010515.01.T01:intron 5.0%
!!! TAATTAATTTGTAATTAATT+TGG + Chr2:70810693-70810712 MsG0280010515.01.T01:intron 5.0%
CGTGACAACCAAAGTAGTGG+AGG - Chr2:70812357-70812376 None:intergenic 50.0%
CTGAGGCAATAGACATGGGA+AGG + Chr2:70807197-70807216 MsG0280010515.01.T01:intron 50.0%
CTTGTTGACACCATTGCTGG+AGG + Chr2:70811817-70811836 MsG0280010515.01.T01:CDS 50.0%
GCAATAGACATGGGAAGGTG+TGG + Chr2:70807202-70807221 MsG0280010515.01.T01:intron 50.0%
GCATTCTTCACAGCAAGCAG+AGG + Chr2:70811756-70811775 MsG0280010515.01.T01:CDS 50.0%
GCCAGTGCAATAATGTGGCA+AGG - Chr2:70810226-70810245 None:intergenic 50.0%
GCCCAACAAGAACCACTTGT+AGG - Chr2:70813446-70813465 None:intergenic 50.0%
GGCAAGCTTGCCAATCTTGA+AGG + Chr2:70811880-70811899 MsG0280010515.01.T01:CDS 50.0%
! CATTCAAAGAGCACGCTCTC+AGG + Chr2:70809118-70809137 MsG0280010515.01.T01:CDS 50.0%
! CGTTGCTTCCTTTGGATTGG+TGG + Chr2:70810614-70810633 MsG0280010515.01.T01:CDS 50.0%
!! ATGGATTGGAGTGGAGGTGT+TGG + Chr2:70809245-70809264 MsG0280010515.01.T01:CDS 50.0%
AACAAGGGGTCCTCCAGCAA+TGG - Chr2:70811830-70811849 None:intergenic 55.0%
ATCCAGACCTGCTGCTACAC+TGG + Chr2:70807422-70807441 MsG0280010515.01.T01:CDS 55.0%
CACAAAACAGGGAGGCTGCA+AGG + Chr2:70808918-70808937 MsG0280010515.01.T01:CDS 55.0%
CAGCTAGTGGCTCCAATTGC+TGG - Chr2:70811705-70811724 None:intergenic 55.0%
GCAGAGGAAGCTCTCTCACA+AGG + Chr2:70811772-70811791 MsG0280010515.01.T01:CDS 55.0%
TTCCAGTGTAGCAGCAGGTC+TGG - Chr2:70807427-70807446 None:intergenic 55.0%
!! GATTGGAGTGGAGGTGTTGG+AGG + Chr2:70809248-70809267 MsG0280010515.01.T01:CDS 55.0%
GCTGGAGGACCCCTTGTTGA+TGG + Chr2:70811832-70811851 MsG0280010515.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 70806940 70813630 70806940 ID=MsG0280010515.01;Name=MsG0280010515.01
Chr2 mRNA 70806940 70813630 70806940 ID=MsG0280010515.01.T01;Parent=MsG0280010515.01;Name=MsG0280010515.01.T01;_AED=0.39;_eAED=0.39;_QI=0|1|0.90|1|1|1|11|203|461
Chr2 exon 70806940 70807039 70806940 ID=MsG0280010515.01.T01:exon:11228;Parent=MsG0280010515.01.T01
Chr2 exon 70807412 70807491 70807412 ID=MsG0280010515.01.T01:exon:11229;Parent=MsG0280010515.01.T01
Chr2 exon 70807702 70807950 70807702 ID=MsG0280010515.01.T01:exon:11230;Parent=MsG0280010515.01.T01
Chr2 exon 70808763 70808807 70808763 ID=MsG0280010515.01.T01:exon:11231;Parent=MsG0280010515.01.T01
Chr2 exon 70808902 70808961 70808902 ID=MsG0280010515.01.T01:exon:11232;Parent=MsG0280010515.01.T01
Chr2 exon 70809062 70809139 70809062 ID=MsG0280010515.01.T01:exon:11233;Parent=MsG0280010515.01.T01
Chr2 exon 70809236 70809284 70809236 ID=MsG0280010515.01.T01:exon:11234;Parent=MsG0280010515.01.T01
Chr2 exon 70810390 70810661 70810390 ID=MsG0280010515.01.T01:exon:11235;Parent=MsG0280010515.01.T01
Chr2 exon 70811694 70811915 70811694 ID=MsG0280010515.01.T01:exon:11236;Parent=MsG0280010515.01.T01
Chr2 exon 70812883 70813025 70812883 ID=MsG0280010515.01.T01:exon:11237;Parent=MsG0280010515.01.T01
Chr2 exon 70813340 70813630 70813340 ID=MsG0280010515.01.T01:exon:11238;Parent=MsG0280010515.01.T01
Chr2 CDS 70806940 70807039 70806940 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70807412 70807491 70807412 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70807702 70807950 70807702 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70808763 70808807 70808763 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70808902 70808961 70808902 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70809062 70809139 70809062 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70809236 70809284 70809236 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70810390 70810661 70810390 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70811694 70811915 70811694 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70812883 70813025 70812883 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 CDS 70813340 70813427 70813340 ID=MsG0280010515.01.T01:cds;Parent=MsG0280010515.01.T01
Chr2 three_prime_UTR 70813428 70813630 70813428 ID=MsG0280010515.01.T01:three_prime_utr;Parent=MsG0280010515.01.T01
Gene Sequence

>MsG0280010515.01.T01

TTGTTTGTTAGGAATGAAGAATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATTGTTTTGCAAGGAGTTAAGAATGGAAATGATGAAACAAAAGCATCTTTTTTCACATCCAGACCTGCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAACCTCAACAGTAGAAGGTGGTAACAAATCAGGAGGTGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAGCAAGAATCACCCTTAAGTAAAAAAGCATCTTCTTTTTCATCAGATCATAATAATAATATGGATCAGCAGAATCTTCAGCTACAACAACAGAAGATAATAATATCAAATGATGCTTCTGCTACTATAAGAACAGCCTCTTCATCACAGAATCAAATATCAGCAGCAGCCAAAGAAAAGAAAAAAGGAGCTGGTTCAACATCAGATAAGCCACTTGATGCAAAGACATTGAGACGTTTAGCACAAAACAGGGAGGCTGCAAGGAAAAGTCGTCTAAGGAAAAAGGCTTATGTGCAGCAACTTGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACATTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAGTGGAGGTGTTGGAGGAAATATAAGCTCTGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTGCAAGCGGCGTTAACAGATAATGAAATGAGAGTAATGGTGGATGGATATTTGTGTCATTATGATCAAATGTTTAGACTCAAAGGTGTCACTGCTAAATCAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCCTCTGAAATTATCATGATGTTGATCCAGCAATTGGAGCCACTAGCTGAGCAGCAGATAATGGGGATGTATGGACTGAGGCATTCTTCACAGCAAGCAGAGGAAGCTCTCTCACAAGGACTTGACCAGTTGCAACAGTCTCTTGTTGACACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCCATAGGCAAGCTTGCCAATCTTGAAGGTTTTCTTCGTCAGGCTGATAACTTGAGGCAACAAACTCTTCACCAATTATGTCGATTACTCACACTTCGTCAAGCGGCACGCTCTTTTCTTGTTATTGGAGAATACTATGGACGACTTAGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGAACATGATCAGTGATGATAACTCATGCCAAACAACCACGGATATGCAAATGGTTCAACCTTCTCAGAATCATTTCACAAATTTCTGA

Protein sequence

>MsG0280010515.01.T01

LFVRNEESGFDFGELEEAIVLQGVKNGNDETKASFFTSRPAATLEMFPSWPMRFHQTSTVEGGNKSGGESSDSALSSKNENPFEQESPLSKKASSFSSDHNNNMDQQNLQLQQQKIIISNDASATIRTASSSQNQISAAAKEKKKGAGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDIQRARSQGMFMDWSGGVGGNISSGGAMFDMEYGRWLEEDNRLLTELRNGLQAALTDNEMRVMVDGYLCHYDQMFRLKGVTAKSDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAIGKLANLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRENMISDDNSCQTTTDMQMVQPSQNHFTNF*