AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025965.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025965.01.T01 MTR_5g048550 98.867 353 4 0 1 353 1 353 0.0 721
MsG0580025965.01.T01 MTR_5g055680 73.580 352 93 0 1 352 1 352 0.0 543
MsG0580025965.01.T01 MTR_0009s0050 72.316 354 98 0 1 354 1 354 0.0 543
MsG0580025965.01.T01 MTR_0009s0050 72.650 351 96 0 1 351 1 351 0.0 541
MsG0580025965.01.T01 MTR_5g055900 71.469 354 101 0 1 354 1 354 0.0 535
MsG0580025965.01.T01 MTR_5g048570 71.751 354 98 1 1 354 1 352 0.0 533
MsG0580025965.01.T01 MTR_5g048850 67.521 351 114 0 1 351 1 351 0.0 506
MsG0580025965.01.T01 MTR_5g055820 67.429 350 113 1 1 349 1 350 3.94e-180 503
MsG0580025965.01.T01 MTR_5g055690 67.898 352 112 1 1 351 1 352 1.14e-179 502
MsG0580025965.01.T01 MTR_8g064200 67.898 352 112 1 1 351 6 357 7.51e-173 485
MsG0580025965.01.T01 MTR_8g064200 67.898 352 112 1 1 351 11 362 1.95e-172 484
MsG0580025965.01.T01 MTR_0328s0030 64.162 346 124 0 6 351 4 349 5.18e-167 470
MsG0580025965.01.T01 MTR_0009s0480 63.265 343 126 0 9 351 8 350 1.58e-166 469
MsG0580025965.01.T01 MTR_5g048470 65.156 353 121 2 1 351 6 358 2.19e-165 466
MsG0580025965.01.T01 MTR_5g055800 63.218 348 125 2 5 350 3 349 9.35e-164 461
MsG0580025965.01.T01 MTR_5g048740 62.248 347 130 1 6 351 4 350 3.26e-162 457
MsG0580025965.01.T01 MTR_2g072910 57.880 349 145 1 5 351 9 357 3.11e-147 420
MsG0580025965.01.T01 MTR_2g072890 56.857 350 148 2 5 351 9 358 5.82e-146 417
MsG0580025965.01.T01 MTR_0009s0050 72.266 256 71 0 99 354 1 256 4.09e-140 398
MsG0580025965.01.T01 MTR_0009s0050 72.727 253 69 0 99 351 1 253 1.83e-139 396
MsG0580025965.01.T01 MTR_5g055690 70.000 270 80 1 1 269 1 270 5.08e-139 396
MsG0580025965.01.T01 MTR_5g048850 68.519 270 85 0 1 270 1 270 6.28e-139 396
MsG0580025965.01.T01 MTR_1g033810 55.056 356 151 4 4 355 8 358 3.78e-133 384
MsG0580025965.01.T01 MTR_0056s0160 72.996 237 64 0 116 352 1 237 1.15e-126 363
MsG0580025965.01.T01 MTR_0009s0480 63.985 261 94 0 9 269 8 268 1.11e-123 357
MsG0580025965.01.T01 MTR_2g072910 56.667 270 115 1 5 272 9 278 3.91e-108 318
MsG0580025965.01.T01 MTR_7g063730 37.971 345 213 1 10 353 26 370 4.64e-95 288
MsG0580025965.01.T01 MTR_7g062580 38.571 350 208 3 4 349 11 357 5.22e-95 287
MsG0580025965.01.T01 MTR_7g062600 38.177 351 209 4 4 349 7 354 1.64e-92 281
MsG0580025965.01.T01 MTR_7g062570 37.464 347 216 1 4 349 11 357 1.93e-91 278
MsG0580025965.01.T01 MTR_0009s0050 73.099 171 46 0 181 351 1 171 2.52e-91 271
MsG0580025965.01.T01 MTR_7g062550 36.857 350 214 3 4 349 16 362 3.23e-88 270
MsG0580025965.01.T01 MTR_2g437380 40.173 346 199 4 10 349 14 357 9.66e-88 269
MsG0580025965.01.T01 MTR_3g026150 38.905 347 205 4 6 348 17 360 4.99e-86 264
MsG0580025965.01.T01 MTR_7g068650 38.110 328 191 4 13 328 15 342 1.50e-79 248
MsG0580025965.01.T01 MTR_7g045650 39.502 281 169 1 4 283 16 296 1.92e-78 243
MsG0580025965.01.T01 MTR_4g015790 36.103 349 202 4 1 328 2 350 1.79e-76 240
MsG0580025965.01.T01 MTR_7g062560 33.038 339 216 3 11 348 25 353 4.00e-75 236
MsG0580025965.01.T01 MTR_3g070860 34.402 343 216 4 13 347 15 356 1.75e-74 234
MsG0580025965.01.T01 MTR_0009s0400 68.493 146 46 0 206 351 2 147 1.03e-73 225
MsG0580025965.01.T01 MTR_5g082750 35.088 342 215 3 13 347 14 355 1.35e-73 232
MsG0580025965.01.T01 MTR_3g117420 38.235 306 184 3 46 348 51 354 1.32e-72 229
MsG0580025965.01.T01 MTR_8g074070 39.869 306 179 3 46 348 51 354 4.82e-72 228
MsG0580025965.01.T01 MTR_2g437380 40.684 263 155 1 88 349 1 263 5.15e-71 223
MsG0580025965.01.T01 MTR_3g063180 33.908 348 217 7 13 350 10 354 1.68e-70 224
MsG0580025965.01.T01 MTR_3g092890 35.780 327 204 4 23 347 14 336 3.32e-69 220
MsG0580025965.01.T01 MTR_8g074050 38.235 306 184 3 46 348 51 354 1.43e-68 219
MsG0580025965.01.T01 MTR_0009s0410 64.474 152 54 0 9 160 8 159 5.17e-68 211
MsG0580025965.01.T01 MTR_4g116010 36.023 347 213 6 8 351 11 351 1.71e-67 216
MsG0580025965.01.T01 MTR_5g065010 36.620 355 201 9 4 348 2 342 2.69e-67 216
MsG0580025965.01.T01 MTR_8g074070 38.562 306 164 4 46 348 51 335 8.55e-67 214
MsG0580025965.01.T01 MTR_3g026150 38.976 254 154 1 95 348 5 257 1.54e-65 208
MsG0580025965.01.T01 MTR_3g026150 39.552 268 156 3 6 269 17 282 2.43e-65 209
MsG0580025965.01.T01 MTR_8g024120 32.827 329 216 5 23 348 17 343 1.23e-61 201
MsG0580025965.01.T01 MTR_7g102820 32.773 357 214 8 14 348 28 380 7.10e-61 200
MsG0580025965.01.T01 MTR_5g032870 34.810 316 198 5 28 336 19 333 2.55e-59 195
MsG0580025965.01.T01 MTR_3g117485 35.928 334 194 8 12 332 12 338 3.47e-59 195
MsG0580025965.01.T01 MTR_5g011250 33.431 341 211 6 13 338 8 347 1.26e-58 193
MsG0580025965.01.T01 MTR_1g062110 32.493 357 222 8 7 348 21 373 1.07e-57 192
MsG0580025965.01.T01 MTR_3g088565 36.000 300 176 5 47 337 3 295 1.32e-57 189
MsG0580025965.01.T01 MTR_3g072810 32.931 331 212 6 10 335 3 328 1.04e-55 185
MsG0580025965.01.T01 MTR_2g072930 55.556 153 66 1 5 155 9 161 3.39e-55 179
MsG0580025965.01.T01 MTR_3g091350 34.943 352 198 9 5 347 31 360 1.02e-54 184
MsG0580025965.01.T01 MTR_3g117485 38.462 260 154 4 76 332 10 266 4.05e-54 179
MsG0580025965.01.T01 MTR_3g072820 33.645 321 205 6 13 328 7 324 6.10e-54 181
MsG0580025965.01.T01 MTR_2g102570 31.832 333 209 7 20 341 24 349 7.93e-54 181
MsG0580025965.01.T01 MTR_1g034140 34.211 304 170 7 46 329 26 319 6.30e-53 178
MsG0580025965.01.T01 MTR_5g059130 31.722 331 218 6 10 335 6 333 1.94e-52 177
MsG0580025965.01.T01 MTR_7g105070 29.640 361 233 10 1 350 14 364 3.53e-52 177
MsG0580025965.01.T01 MTR_2g025120 30.464 302 198 5 44 340 1 295 7.28e-52 175
MsG0580025965.01.T01 MTR_4g087110 33.645 321 188 8 47 345 26 343 1.54e-51 175
MsG0580025965.01.T01 MTR_2g069300 28.986 345 233 6 12 348 18 358 1.79e-51 175
MsG0580025965.01.T01 MTR_4g093840 33.866 313 188 7 47 348 62 366 2.75e-51 175
MsG0580025965.01.T01 MTR_5g032880 32.609 322 209 5 22 336 351 671 3.58e-51 181
MsG0580025965.01.T01 MTR_5g032880 32.258 310 200 5 28 333 19 322 1.54e-50 179
MsG0580025965.01.T01 MTR_4g087090 32.248 307 178 6 47 331 30 328 7.20e-51 173
MsG0580025965.01.T01 MTR_1g032140 32.081 346 215 9 12 347 29 364 8.32e-51 173
MsG0580025965.01.T01 MTR_8g041620 30.791 354 219 10 12 349 32 375 1.23e-50 173
MsG0580025965.01.T01 MTR_1g093120 33.136 338 206 7 23 348 41 370 1.40e-50 173
MsG0580025965.01.T01 MTR_4g087140 33.432 338 191 12 15 329 2 328 2.56e-50 172
MsG0580025965.01.T01 MTR_8g009110 32.026 306 194 7 47 343 60 360 3.74e-50 172
MsG0580025965.01.T01 MTR_1g034120 29.722 360 208 9 21 349 1 346 6.30e-50 171
MsG0580025965.01.T01 MTR_1g093110 31.977 344 211 9 20 348 39 374 6.36e-50 171
MsG0580025965.01.T01 MTR_1g102070 33.766 308 188 7 22 317 36 339 1.04e-49 171
MsG0580025965.01.T01 MTR_1g093140 31.579 361 225 10 2 348 26 378 1.95e-49 170
MsG0580025965.01.T01 MTR_8g009090 30.321 343 218 9 12 343 27 359 3.55e-49 169
MsG0580025965.01.T01 MTR_8g041600 29.944 354 222 9 12 349 32 375 4.19e-49 169
MsG0580025965.01.T01 MTR_3g091360 34.628 309 187 6 47 347 52 353 4.68e-49 169
MsG0580025965.01.T01 MTR_1g048940 30.725 345 221 10 18 352 18 354 1.37e-48 167
MsG0580025965.01.T01 MTR_3g083370 29.900 301 199 5 44 340 1 293 2.01e-48 166
MsG0580025965.01.T01 MTR_1g034060 29.444 360 209 9 21 349 1 346 2.64e-48 166
MsG0580025965.01.T01 MTR_8g009160 29.412 340 225 7 12 343 27 359 2.93e-48 167
MsG0580025965.01.T01 MTR_2g069090 30.435 345 228 6 12 348 32 372 3.97e-48 166
MsG0580025965.01.T01 MTR_8g009080 30.225 311 208 5 44 350 94 399 4.05e-48 167
MsG0580025965.01.T01 MTR_8g009170 29.598 348 226 8 12 348 27 366 4.69e-48 166
MsG0580025965.01.T01 MTR_1g011580 33.117 308 191 8 47 351 63 358 4.91e-48 166
MsG0580025965.01.T01 MTR_5g085330 31.000 300 193 5 48 340 6 298 9.25e-48 164
MsG0580025965.01.T01 MTR_8g028435 31.596 307 193 8 47 343 60 359 4.41e-47 164
MsG0580025965.01.T01 MTR_7g081710 28.779 344 233 7 12 348 13 351 5.39e-47 163
MsG0580025965.01.T01 MTR_8g008930 29.825 342 222 8 12 343 27 360 7.03e-47 163
MsG0580025965.01.T01 MTR_1g032250 32.267 344 217 8 12 347 36 371 7.27e-47 163
MsG0580025965.01.T01 MTR_1g070135 33.856 319 197 8 24 335 15 326 9.70e-47 162
MsG0580025965.01.T01 MTR_3g043900 31.214 346 220 9 12 348 17 353 1.27e-46 162
MsG0580025965.01.T01 MTR_1g032220 31.977 344 218 8 12 347 36 371 1.35e-46 162
MsG0580025965.01.T01 MTR_4g117880 30.347 346 219 10 12 346 27 361 1.49e-46 162
MsG0580025965.01.T01 MTR_6g015950 32.919 322 195 9 24 335 16 326 1.97e-46 161
MsG0580025965.01.T01 MTR_7g016090 32.075 318 202 8 24 335 16 325 2.16e-46 161
MsG0580025965.01.T01 MTR_7g016090 32.075 318 202 8 24 335 18 327 2.20e-46 161
MsG0580025965.01.T01 MTR_8g062600 29.132 357 232 7 4 348 26 373 2.44e-46 162
MsG0580025965.01.T01 MTR_2g069190 29.855 345 229 7 12 348 32 371 3.04e-46 161
MsG0580025965.01.T01 MTR_3g045230 30.816 331 216 9 25 348 30 354 7.19e-46 160
MsG0580025965.01.T01 MTR_2g069210 29.971 347 226 9 12 348 28 367 9.39e-46 160
MsG0580025965.01.T01 MTR_5g059140 32.852 277 177 4 47 317 42 315 1.21e-45 159
MsG0580025965.01.T01 MTR_8g075890 30.640 297 198 4 16 307 10 303 1.83e-45 159
MsG0580025965.01.T01 MTR_4g087100 32.399 321 192 8 47 345 26 343 4.96e-45 158
MsG0580025965.01.T01 MTR_4g087120 31.803 305 183 9 47 329 26 327 5.34e-45 158
MsG0580025965.01.T01 MTR_8g075830 30.033 303 204 4 10 307 4 303 5.83e-45 158
MsG0580025965.01.T01 MTR_7g102720 31.348 319 208 8 34 348 24 335 9.76e-45 157
MsG0580025965.01.T01 MTR_5g022020 31.752 274 174 5 41 307 36 303 1.03e-44 157
MsG0580025965.01.T01 MTR_4g024660 28.291 357 235 7 4 348 26 373 1.65e-44 157
MsG0580025965.01.T01 MTR_1g043760 30.267 337 222 6 12 341 19 349 2.78e-44 156
MsG0580025965.01.T01 MTR_3g088745 30.864 324 199 8 23 330 15 329 3.65e-44 156
MsG0580025965.01.T01 MTR_3g058610 31.461 267 177 5 46 307 38 303 1.04e-43 154
MsG0580025965.01.T01 MTR_1g070085 30.061 326 219 5 18 338 8 329 5.84e-43 152
MsG0580025965.01.T01 MTR_1g070085 30.061 326 219 5 18 338 8 329 5.84e-43 152
MsG0580025965.01.T01 MTR_6g464620 31.090 312 191 7 22 317 41 344 7.71e-43 153
MsG0580025965.01.T01 MTR_8g033380 30.421 309 198 6 21 317 30 333 9.98e-43 152
MsG0580025965.01.T01 MTR_6g092620 31.126 302 187 7 47 341 3 290 4.53e-42 149
MsG0580025965.01.T01 MTR_2g069010 28.767 365 235 9 1 350 23 377 5.43e-42 150
MsG0580025965.01.T01 MTR_1g070185 29.107 347 224 9 12 348 33 367 9.03e-42 150
MsG0580025965.01.T01 MTR_2g068840 28.161 348 232 9 12 348 21 361 1.46e-41 149
MsG0580025965.01.T01 MTR_0032s0040 28.818 347 227 8 12 343 27 368 1.84e-41 149
MsG0580025965.01.T01 MTR_7g029655 27.429 350 237 7 12 349 27 371 2.88e-41 148
MsG0580025965.01.T01 MTR_2g069060 29.874 318 208 7 38 348 40 349 3.03e-41 148
MsG0580025965.01.T01 MTR_4g115990 29.900 301 189 4 41 340 40 319 4.46e-41 147
MsG0580025965.01.T01 MTR_2g068960 28.650 363 234 9 1 348 17 369 5.61e-41 147
MsG0580025965.01.T01 MTR_3g096500 30.844 308 195 7 19 313 40 342 6.47e-41 148
MsG0580025965.01.T01 MTR_2g083000 28.205 312 197 8 46 348 32 325 8.43e-41 146
MsG0580025965.01.T01 MTR_1g070120 29.154 319 212 7 24 335 15 326 2.15e-40 145
MsG0580025965.01.T01 MTR_7g016080 30.395 329 204 9 12 335 11 319 2.71e-40 145
MsG0580025965.01.T01 MTR_4g123020 33.110 299 184 7 47 337 20 310 3.17e-40 144
MsG0580025965.01.T01 MTR_1g062110 31.126 302 188 9 7 292 21 318 3.32e-40 144
MsG0580025965.01.T01 MTR_1g081840 31.803 305 185 7 24 313 33 329 3.97e-40 145
MsG0580025965.01.T01 MTR_2g068950 27.824 363 237 9 1 348 17 369 4.65e-40 145
MsG0580025965.01.T01 MTR_1g043810 28.902 346 230 8 12 348 19 357 1.28e-39 144
MsG0580025965.01.T01 MTR_8g469400 27.451 357 225 8 4 348 26 360 1.29e-39 144
MsG0580025965.01.T01 MTR_7g056347 27.635 351 231 8 12 348 32 373 1.30e-39 144
MsG0580025965.01.T01 MTR_8g063070 25.731 342 239 6 12 343 32 368 1.31e-39 144
MsG0580025965.01.T01 MTR_4g087130 30.864 324 192 7 34 328 5 325 1.46e-39 144
MsG0580025965.01.T01 MTR_7g451860 32.313 294 171 8 46 328 40 316 1.53e-39 143
MsG0580025965.01.T01 MTR_7g047670 32.313 294 171 8 46 328 40 316 1.53e-39 143
MsG0580025965.01.T01 MTR_4g119410 28.691 359 231 9 4 348 26 373 1.57e-39 144
MsG0580025965.01.T01 MTR_2g083030 30.000 300 168 7 46 328 36 310 4.88e-39 141
MsG0580025965.01.T01 MTR_8g009120 28.916 332 193 9 25 343 47 348 4.95e-39 142
MsG0580025965.01.T01 MTR_1g070080 29.907 321 204 9 24 333 14 324 5.58e-39 142
MsG0580025965.01.T01 MTR_2g019370 29.904 311 196 10 40 337 21 322 5.79e-39 141
MsG0580025965.01.T01 MTR_8g093930 29.283 321 204 8 12 320 19 328 9.12e-39 142
MsG0580025965.01.T01 MTR_2g069020 27.809 356 231 9 12 352 30 374 1.11e-38 142
MsG0580025965.01.T01 MTR_2g033270 32.110 327 192 12 35 347 6 316 1.18e-38 140
MsG0580025965.01.T01 MTR_2g069020 27.841 352 228 9 12 348 30 370 1.53e-38 141
MsG0580025965.01.T01 MTR_5g005570 29.373 303 173 6 42 328 32 309 2.26e-38 140
MsG0580025965.01.T01 MTR_8g461330 31.922 307 184 11 46 337 26 322 6.64e-38 139
MsG0580025965.01.T01 MTR_1g043770 27.697 343 236 6 12 348 19 355 7.94e-38 139
MsG0580025965.01.T01 MTR_4g074130 29.730 296 175 8 46 328 39 314 1.39e-37 138
MsG0580025965.01.T01 MTR_8g009150 26.488 336 198 10 25 348 47 345 3.33e-36 134
MsG0580025965.01.T01 MTR_2g070870 32.364 275 167 9 46 312 27 290 9.22e-36 133
MsG0580025965.01.T01 MTR_7g056393 27.221 349 235 8 12 348 32 373 2.02e-35 133
MsG0580025965.01.T01 MTR_8g006930 26.801 347 239 6 12 348 32 373 2.56e-35 132
MsG0580025965.01.T01 MTR_1g043775 27.954 347 232 10 12 348 19 357 3.98e-35 132
MsG0580025965.01.T01 MTR_2g025120 30.303 231 150 4 44 270 1 224 2.12e-34 126
MsG0580025965.01.T01 MTR_7g078010 27.221 349 235 7 12 348 32 373 6.12e-34 129
MsG0580025965.01.T01 MTR_1g086550 30.267 337 204 11 35 349 6 333 1.25e-33 127
MsG0580025965.01.T01 MTR_3g464530 31.502 273 164 8 42 305 30 288 2.76e-33 126
MsG0580025965.01.T01 MTR_4g132770 40.945 127 73 1 208 332 32 158 8.97e-33 120
MsG0580025965.01.T01 MTR_8g009170 29.856 278 178 7 12 280 27 296 1.44e-32 123
MsG0580025965.01.T01 MTR_1g070085 33.010 206 136 2 133 338 48 251 4.56e-32 121
MsG0580025965.01.T01 MTR_1g070135 33.992 253 153 8 24 269 15 260 7.38e-32 121
MsG0580025965.01.T01 MTR_8g009080 30.973 226 150 4 44 268 94 314 8.55e-32 122
MsG0580025965.01.T01 MTR_4g096840 28.873 284 180 9 69 337 46 322 1.50e-31 121
MsG0580025965.01.T01 MTR_7g056353 27.778 270 184 4 81 344 79 343 2.08e-31 124
MsG0580025965.01.T01 MTR_8g041600 29.259 270 169 8 12 269 32 291 3.75e-31 120
MsG0580025965.01.T01 MTR_3g083370 29.130 230 152 4 44 269 1 223 5.95e-31 117
MsG0580025965.01.T01 MTR_8g009080 30.942 223 148 4 44 265 94 311 1.40e-30 119
MsG0580025965.01.T01 MTR_1g070100 33.005 203 134 2 133 335 44 244 1.62e-30 117
MsG0580025965.01.T01 MTR_2g068800 27.368 285 174 9 12 287 21 281 1.21e-29 115
MsG0580025965.01.T01 MTR_2g069060 30.252 238 153 5 38 269 18 248 1.80e-28 111
MsG0580025965.01.T01 MTR_8g093980 28.479 309 202 8 24 320 38 339 2.84e-28 113
MsG0580025965.01.T01 MTR_1g027290 28.261 322 201 10 46 348 28 338 4.17e-28 112
MsG0580025965.01.T01 MTR_5g025090 27.974 311 197 8 47 348 5 297 4.82e-28 111
MsG0580025965.01.T01 MTR_1g043810 28.897 263 174 6 12 268 19 274 1.81e-27 110
MsG0580025965.01.T01 MTR_1g043770 28.413 271 183 6 1 268 10 272 2.07e-26 107
MsG0580025965.01.T01 MTR_3g040410 28.623 276 180 7 45 312 4 270 2.47e-26 107
MsG0580025965.01.T01 MTR_3g464530 31.646 237 139 8 42 269 30 252 1.89e-25 103
MsG0580025965.01.T01 MTR_8g009180 27.778 234 141 5 131 343 63 289 2.63e-25 103
MsG0580025965.01.T01 MTR_4g100600 29.605 304 191 11 46 333 8 304 4.88e-25 103
MsG0580025965.01.T01 MTR_1g043775 27.473 273 185 7 1 268 10 274 3.48e-24 101
MsG0580025965.01.T01 MTR_7g077670 27.907 301 197 9 40 330 4 294 1.08e-23 100
MsG0580025965.01.T01 MTR_7g078010 27.652 264 178 6 12 269 32 288 1.74e-23 99.4
MsG0580025965.01.T01 MTR_6g088665 26.962 293 187 10 66 334 38 327 1.98e-23 99.8
MsG0580025965.01.T01 MTR_8g030880 27.815 302 197 10 41 330 2 294 2.39e-23 99.0
MsG0580025965.01.T01 MTR_6g088665 26.962 293 186 11 66 334 38 326 3.90e-23 99.0
MsG0580025965.01.T01 MTR_1g070110 41.739 115 66 1 220 334 107 220 6.64e-23 96.3
MsG0580025965.01.T01 MTR_5g025050 25.723 311 210 9 47 348 5 303 4.80e-22 95.1
MsG0580025965.01.T01 MTR_1g027310 24.194 310 187 7 46 348 48 316 1.25e-21 94.4
MsG0580025965.01.T01 MTR_7g090520 27.564 312 189 13 47 338 10 304 1.70e-21 94.0
MsG0580025965.01.T01 MTR_4g011720 27.778 306 207 9 39 336 1 300 6.14e-21 92.4
MsG0580025965.01.T01 MTR_3g108520 25.949 316 197 12 46 338 6 307 4.29e-20 90.1
MsG0580025965.01.T01 MTR_8g102600 26.073 303 178 11 66 338 29 315 5.58e-20 89.7
MsG0580025965.01.T01 MTR_4g011690 27.124 306 210 9 39 336 1 301 5.88e-20 89.4
MsG0580025965.01.T01 MTR_4g100590 26.408 284 177 8 69 333 29 299 8.90e-20 89.0
MsG0580025965.01.T01 MTR_4g021380 25.000 308 211 11 46 338 6 308 5.92e-18 84.0
MsG0580025965.01.T01 MTR_1g032240 33.121 157 77 4 192 347 48 177 1.02e-17 80.5
MsG0580025965.01.T01 MTR_4g021360 26.953 256 167 10 89 333 54 300 1.47e-16 79.7
MsG0580025965.01.T01 MTR_1g043840 28.488 172 113 3 166 329 55 224 1.70e-16 79.7
MsG0580025965.01.T01 MTR_8g102600 34.109 129 74 4 215 338 143 265 9.25e-15 73.9
MsG0580025965.01.T01 MTR_6g035160 34.454 119 75 3 218 334 48 165 2.38e-14 70.9
MsG0580025965.01.T01 MTR_4g027020 65.854 41 13 1 78 117 14 54 6.57e-12 60.5
MsG0580025965.01.T01 MTR_3g040440 37.037 81 49 2 208 288 6 84 1.78e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025965.01.T01 AT1G17020 53.295 349 157 4 6 348 10 358 1.23e-136 393
MsG0580025965.01.T01 AT1G17010 52.137 351 162 4 6 350 10 360 3.23e-131 379
MsG0580025965.01.T01 AT4G25300 50.000 348 169 4 6 348 9 356 1.98e-127 370
MsG0580025965.01.T01 AT1G78550 47.550 347 178 3 6 348 10 356 3.59e-124 361
MsG0580025965.01.T01 AT4G25310 48.563 348 171 4 6 348 9 353 1.57e-120 352
MsG0580025965.01.T01 AT1G78550 48.754 281 140 1 68 348 2 278 1.37e-104 308
MsG0580025965.01.T01 AT4G25310 44.380 347 159 4 6 348 9 325 1.55e-101 303
MsG0580025965.01.T01 AT3G21420 42.165 351 193 4 10 350 14 364 2.96e-93 283
MsG0580025965.01.T01 AT2G38240 37.427 342 208 4 12 348 11 351 1.27e-83 258
MsG0580025965.01.T01 AT3G55970 34.294 347 216 5 13 347 14 360 2.18e-71 227
MsG0580025965.01.T01 AT5G05600 33.628 339 218 3 13 344 27 365 5.62e-71 226
MsG0580025965.01.T01 AT3G11180 35.294 340 211 4 13 344 56 394 2.44e-70 225
MsG0580025965.01.T01 AT3G11180 36.111 324 198 4 13 328 56 378 5.03e-70 224
MsG0580025965.01.T01 AT5G20400 36.111 324 198 5 24 340 19 340 4.54e-69 220
MsG0580025965.01.T01 AT4G25300 53.403 191 88 1 159 348 72 262 5.10e-69 217
MsG0580025965.01.T01 AT5G20550 37.188 320 190 7 24 333 19 337 3.16e-67 216
MsG0580025965.01.T01 AT1G49390 34.323 303 193 3 47 345 45 345 1.81e-66 214
MsG0580025965.01.T01 AT5G54000 35.117 299 188 3 46 340 45 341 1.28e-64 209
MsG0580025965.01.T01 AT4G16330 35.294 306 184 6 46 346 66 362 4.49e-64 208
MsG0580025965.01.T01 AT4G10500 32.424 330 217 6 22 347 18 345 4.94e-63 205
MsG0580025965.01.T01 AT5G24530 34.769 325 205 4 24 344 15 336 5.58e-63 204
MsG0580025965.01.T01 AT2G36690 32.951 349 219 7 13 350 21 365 3.38e-61 201
MsG0580025965.01.T01 AT2G36690 32.951 349 219 7 13 350 21 365 3.38e-61 201
MsG0580025965.01.T01 AT1G49390 34.328 268 173 2 79 345 1 266 3.51e-60 195
MsG0580025965.01.T01 AT4G22880 32.961 358 219 7 10 351 4 356 1.44e-59 196
MsG0580025965.01.T01 AT4G22880 32.961 358 219 7 10 351 4 356 1.44e-59 196
MsG0580025965.01.T01 AT4G22880 32.961 358 219 7 10 351 4 356 1.44e-59 196
MsG0580025965.01.T01 AT5G54000 35.361 263 167 2 79 340 1 261 7.28e-59 191
MsG0580025965.01.T01 AT4G10490 32.827 329 214 6 24 347 18 344 4.09e-58 192
MsG0580025965.01.T01 AT3G13610 32.759 348 211 12 12 348 26 361 7.01e-55 184
MsG0580025965.01.T01 AT5G05600 33.333 264 169 3 13 269 27 290 3.29e-54 180
MsG0580025965.01.T01 AT1G55290 32.945 343 210 10 12 344 25 357 3.76e-54 182
MsG0580025965.01.T01 AT4G16330 35.907 259 157 4 92 346 3 256 1.33e-53 177
MsG0580025965.01.T01 AT1G77330 33.663 303 178 6 47 337 3 294 3.77e-53 178
MsG0580025965.01.T01 AT1G12010 32.441 299 189 5 46 340 6 295 3.84e-53 178
MsG0580025965.01.T01 AT3G19010 33.140 344 201 9 33 354 10 346 6.12e-53 179
MsG0580025965.01.T01 AT3G19010 33.140 344 201 9 33 354 10 346 6.12e-53 179
MsG0580025965.01.T01 AT3G55970 34.074 270 166 5 13 270 14 283 9.51e-53 177
MsG0580025965.01.T01 AT3G19000 35.211 355 202 11 19 354 6 351 1.26e-51 175
MsG0580025965.01.T01 AT1G62380 32.333 300 188 6 46 340 6 295 2.93e-51 173
MsG0580025965.01.T01 AT3G60290 31.805 349 221 9 12 350 15 356 3.31e-51 174
MsG0580025965.01.T01 AT1G05010 31.373 306 194 6 44 340 1 299 4.04e-51 173
MsG0580025965.01.T01 AT5G43440 31.519 349 221 7 12 348 23 365 7.60e-51 174
MsG0580025965.01.T01 AT1G06650 31.445 353 208 10 12 343 25 364 1.45e-49 170
MsG0580025965.01.T01 AT2G44800 31.977 344 221 9 12 347 15 353 1.56e-49 170
MsG0580025965.01.T01 AT5G59540 31.624 351 216 9 13 348 25 366 4.57e-49 169
MsG0580025965.01.T01 AT5G59530 31.503 346 222 6 13 348 24 364 8.04e-49 168
MsG0580025965.01.T01 AT1G06620 31.519 349 218 9 12 348 26 365 1.08e-48 168
MsG0580025965.01.T01 AT5G08640 30.061 326 218 7 10 328 3 325 3.14e-48 166
MsG0580025965.01.T01 AT5G08640 30.061 326 218 7 10 328 3 325 3.14e-48 166
MsG0580025965.01.T01 AT1G15550 32.890 301 186 7 47 338 57 350 6.20e-48 166
MsG0580025965.01.T01 AT3G19010 31.818 330 194 9 33 354 10 316 1.02e-47 164
MsG0580025965.01.T01 AT1G04380 33.117 308 193 6 47 348 45 345 1.45e-47 164
MsG0580025965.01.T01 AT1G06640 31.161 353 209 10 12 343 25 364 2.03e-47 165
MsG0580025965.01.T01 AT5G07480 30.915 317 202 7 47 350 44 356 6.70e-47 163
MsG0580025965.01.T01 AT4G25420 32.993 294 184 5 24 307 40 330 1.71e-46 162
MsG0580025965.01.T01 AT3G12900 31.105 344 224 9 12 349 21 357 7.19e-46 160
MsG0580025965.01.T01 AT5G07200 32.797 311 192 6 15 312 28 334 1.90e-45 160
MsG0580025965.01.T01 AT2G19590 31.229 301 187 7 46 341 10 295 4.94e-45 157
MsG0580025965.01.T01 AT5G43450 30.499 341 220 8 13 343 24 357 5.83e-45 158
MsG0580025965.01.T01 AT1G04350 31.322 348 220 10 12 348 21 360 1.06e-44 157
MsG0580025965.01.T01 AT1G06645 32.595 316 182 11 44 343 74 374 2.40e-44 157
MsG0580025965.01.T01 AT2G30830 30.145 345 227 8 12 348 20 358 3.42e-44 156
MsG0580025965.01.T01 AT2G30840 31.214 346 216 10 12 343 20 357 3.66e-44 156
MsG0580025965.01.T01 AT4G21200 31.469 286 161 6 46 318 41 304 2.55e-43 153
MsG0580025965.01.T01 AT1G60980 32.362 309 187 7 24 316 36 338 4.09e-43 153
MsG0580025965.01.T01 AT1G80340 32.526 289 182 5 47 329 50 331 9.66e-43 152
MsG0580025965.01.T01 AT3G51240 28.904 301 206 4 12 307 5 302 1.78e-42 151
MsG0580025965.01.T01 AT1G03410 28.947 342 218 10 12 337 19 351 5.36e-42 150
MsG0580025965.01.T01 AT1G03410 28.947 342 218 10 12 337 56 388 9.67e-42 150
MsG0580025965.01.T01 AT3G19000 35.556 270 149 10 19 269 6 269 1.51e-41 147
MsG0580025965.01.T01 AT1G78440 30.065 306 189 10 47 338 18 312 1.62e-41 148
MsG0580025965.01.T01 AT5G51810 31.879 298 180 8 23 307 41 328 1.66e-41 149
MsG0580025965.01.T01 AT1G03400 30.904 343 204 13 12 339 19 343 1.81e-41 149
MsG0580025965.01.T01 AT3G61400 29.282 362 216 15 12 349 24 369 4.98e-41 148
MsG0580025965.01.T01 AT5G63590 32.639 288 184 7 47 328 14 297 5.90e-41 146
MsG0580025965.01.T01 AT2G30840 30.925 346 211 11 12 343 20 351 5.91e-41 147
MsG0580025965.01.T01 AT4G21690 30.868 311 192 6 47 342 47 349 6.10e-40 144
MsG0580025965.01.T01 AT1G80330 30.323 310 198 8 35 333 36 338 9.79e-40 144
MsG0580025965.01.T01 AT5G12270 30.744 309 202 7 47 348 56 359 6.06e-39 142
MsG0580025965.01.T01 AT1G44090 29.032 310 200 6 19 315 38 340 2.75e-38 141
MsG0580025965.01.T01 AT5G63600 29.236 301 200 6 47 345 33 322 3.61e-37 136
MsG0580025965.01.T01 AT1G02400 33.654 312 185 11 48 349 25 324 4.60e-37 136
MsG0580025965.01.T01 AT3G19010 31.679 262 153 8 33 272 10 267 7.32e-37 135
MsG0580025965.01.T01 AT5G63600 29.139 302 200 7 47 345 33 323 3.18e-36 134
MsG0580025965.01.T01 AT2G25450 29.513 349 225 10 12 348 20 359 4.34e-36 134
MsG0580025965.01.T01 AT1G06650 31.786 280 161 8 12 274 25 291 5.93e-36 133
MsG0580025965.01.T01 AT3G49620 33.793 290 168 8 41 307 28 316 7.59e-36 134
MsG0580025965.01.T01 AT1G03400 28.108 370 207 14 12 339 19 371 1.33e-35 134
MsG0580025965.01.T01 AT2G19590 30.182 275 173 6 71 341 21 280 2.01e-35 131
MsG0580025965.01.T01 AT4G25420 31.128 257 164 5 24 270 40 293 2.65e-35 130
MsG0580025965.01.T01 AT1G47990 27.950 322 200 11 47 351 15 321 2.98e-34 129
MsG0580025965.01.T01 AT3G50210 31.293 294 163 8 47 307 8 295 4.18e-34 128
MsG0580025965.01.T01 AT3G50210 31.293 294 163 8 47 307 8 295 4.18e-34 128
MsG0580025965.01.T01 AT3G50210 31.293 294 163 8 47 307 8 295 4.18e-34 128
MsG0580025965.01.T01 AT1G06620 33.083 266 160 8 12 268 26 282 7.94e-34 126
MsG0580025965.01.T01 AT1G50960 31.010 287 173 8 31 303 20 295 1.21e-33 127
MsG0580025965.01.T01 AT5G43440 31.203 266 168 6 12 268 23 282 5.64e-33 124
MsG0580025965.01.T01 AT1G30040 27.044 318 211 9 29 337 16 321 7.42e-33 125
MsG0580025965.01.T01 AT1G06640 33.471 242 141 6 44 275 61 292 8.38e-33 125
MsG0580025965.01.T01 AT1G06640 31.273 275 159 8 12 269 25 286 1.43e-32 123
MsG0580025965.01.T01 AT5G07480 31.100 209 134 4 150 350 41 247 2.19e-32 122
MsG0580025965.01.T01 AT3G49630 30.573 314 182 10 47 329 9 317 2.55e-32 124
MsG0580025965.01.T01 AT2G34555 30.000 300 191 10 47 337 27 316 9.17e-32 122
MsG0580025965.01.T01 AT5G51810 30.418 263 160 8 23 272 41 293 1.33e-31 121
MsG0580025965.01.T01 AT3G49630 30.640 297 178 9 56 329 22 313 1.68e-31 121
MsG0580025965.01.T01 AT3G51240 29.907 214 147 2 96 307 6 218 2.18e-31 120
MsG0580025965.01.T01 AT1G04380 33.333 228 142 5 47 271 45 265 2.38e-31 119
MsG0580025965.01.T01 AT5G59540 30.970 268 166 7 13 269 25 284 2.99e-31 120
MsG0580025965.01.T01 AT2G30840 30.970 268 166 8 12 268 20 279 9.92e-31 119
MsG0580025965.01.T01 AT5G43935 28.425 292 175 9 46 329 18 283 1.00e-30 118
MsG0580025965.01.T01 AT3G61400 30.576 278 160 12 12 269 24 288 3.67e-30 117
MsG0580025965.01.T01 AT5G43450 30.303 264 170 7 12 268 23 279 7.90e-29 113
MsG0580025965.01.T01 AT3G46500 28.754 313 198 12 33 329 6 309 1.20e-28 114
MsG0580025965.01.T01 AT5G63595 28.897 263 166 5 48 310 26 267 1.45e-28 112
MsG0580025965.01.T01 AT3G47190 27.305 282 165 8 47 306 32 295 6.09e-27 109
MsG0580025965.01.T01 AT5G58660 26.557 305 182 9 37 305 13 311 5.48e-26 107
MsG0580025965.01.T01 AT3G46500 28.622 283 177 12 33 299 6 279 2.13e-24 101
MsG0580025965.01.T01 AT4G23340 29.801 302 178 13 46 330 9 293 1.12e-23 100
MsG0580025965.01.T01 AT1G14130 25.484 310 204 6 47 346 9 301 3.99e-23 98.2
MsG0580025965.01.T01 AT3G50210 33.735 166 104 3 148 307 48 213 1.31e-21 92.8
MsG0580025965.01.T01 AT5G51310 26.948 308 189 13 46 330 4 298 1.74e-21 94.0
MsG0580025965.01.T01 AT3G49630 38.636 132 75 4 203 329 114 244 4.44e-21 91.7
MsG0580025965.01.T01 AT1G14120 27.414 321 178 9 47 343 8 297 1.79e-20 90.9
MsG0580025965.01.T01 AT1G14120 27.414 321 178 9 47 343 8 297 1.79e-20 90.9
MsG0580025965.01.T01 AT1G14120 27.414 321 178 9 47 343 8 297 1.79e-20 90.9
MsG0580025965.01.T01 AT5G63580 28.194 227 154 6 47 269 19 240 2.62e-20 89.0
MsG0580025965.01.T01 AT1G35190 27.431 288 180 8 66 329 29 311 2.77e-20 90.9
MsG0580025965.01.T01 AT5G63580 28.444 225 152 6 47 267 19 238 3.81e-20 89.0
MsG0580025965.01.T01 AT1G30040 26.800 250 162 9 29 269 16 253 4.15e-20 89.0
MsG0580025965.01.T01 AT3G46490 26.087 299 178 9 66 333 34 320 4.19e-20 90.1
MsG0580025965.01.T01 AT1G52820 26.421 299 202 11 46 334 11 301 2.02e-19 88.2
MsG0580025965.01.T01 AT1G02400 31.760 233 144 9 48 271 25 251 2.19e-19 87.0
MsG0580025965.01.T01 AT3G46500 29.730 185 120 5 153 329 53 235 2.51e-19 86.7
MsG0580025965.01.T01 AT3G46500 29.730 185 120 5 153 329 53 235 2.51e-19 86.7
MsG0580025965.01.T01 AT1G35190 27.402 281 174 8 66 333 29 292 7.86e-19 86.3
MsG0580025965.01.T01 AT3G46500 30.857 175 111 5 163 329 1 173 8.50e-19 83.6
MsG0580025965.01.T01 AT3G46490 26.316 285 159 10 66 311 34 306 1.64e-18 85.5
MsG0580025965.01.T01 AT4G22870 47.619 84 43 1 238 320 2 85 1.64e-18 80.5
MsG0580025965.01.T01 AT4G16765 31.343 201 125 6 144 333 42 240 1.70e-17 81.3
MsG0580025965.01.T01 AT4G16765 31.343 201 125 6 144 333 42 240 1.70e-17 81.3
MsG0580025965.01.T01 AT4G16765 31.343 201 125 6 144 333 42 240 1.70e-17 81.3
MsG0580025965.01.T01 AT4G23340 36.923 130 75 5 206 330 48 175 1.61e-16 77.8
MsG0580025965.01.T01 AT2G06960 32.298 161 93 6 177 336 1 146 2.16e-16 75.9
MsG0580025965.01.T01 AT4G22870 41.176 102 53 3 226 320 25 126 2.34e-16 75.9
MsG0580025965.01.T01 AT3G46500 29.677 155 99 5 153 299 53 205 1.33e-15 75.5
MsG0580025965.01.T01 AT3G46500 28.994 169 107 6 142 299 8 174 3.09e-15 73.9
MsG0580025965.01.T01 AT3G46500 28.994 169 107 6 142 299 8 174 3.09e-15 73.9
MsG0580025965.01.T01 AT4G16765 36.667 120 69 3 219 333 77 194 7.08e-15 73.2
MsG0580025965.01.T01 AT1G52800 25.098 255 182 6 69 321 38 285 6.88e-14 72.0
MsG0580025965.01.T01 AT3G46480 25.397 252 162 8 96 335 38 275 7.19e-14 71.6
MsG0580025965.01.T01 AT4G16765 32.143 168 101 6 144 300 42 207 9.74e-14 70.5
MsG0580025965.01.T01 AT4G03070 27.222 180 120 6 161 332 128 304 2.67e-13 70.5
MsG0580025965.01.T01 AT3G46500 29.545 132 84 4 153 276 53 183 5.80e-12 64.3
MsG0580025965.01.T01 AT1G28030 24.510 306 193 10 40 330 20 302 6.21e-12 66.2
MsG0580025965.01.T01 AT1G80320 24.906 265 189 8 74 334 41 299 2.99e-11 64.3

Find 98 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAACCAGAAAATGTTAT+TGG 0.207405 5:+28272200 MsG0580025965.01.T01:CDS
TTGAACGATGCAGGTCTTTC+AGG 0.216790 5:-28272791 None:intergenic
TGGAAGAGAAGAAGAAATTT+TGG 0.275911 5:+28271456 MsG0580025965.01.T01:CDS
ATAATTCAGTCAATTTAATA+AGG 0.294751 5:+28273009 MsG0580025965.01.T01:three_prime_UTR
CGAGGATTCCTTTCATCTAA+TGG 0.295402 5:-28271575 None:intergenic
AAGGCTGCTACGTACTAAAT+AGG 0.309309 5:+28273028 MsG0580025965.01.T01:three_prime_UTR
AAATAATTCTGTTACTTCAT+TGG 0.320407 5:-28272132 None:intergenic
CTGGAGGCCTTCTATCTCAT+TGG 0.331238 5:-28272270 None:intergenic
CCAAATCCTTCCATGTCATT+TGG 0.354285 5:-28271485 None:intergenic
AGAGTAGAAAACAACCTAAA+TGG 0.365783 5:-28271620 None:intergenic
CAAAATAAAATGTCAAGGTT+TGG 0.372951 5:+28270443 None:intergenic
TTGATTGAAAAGGTAAAGAT+AGG 0.374434 5:+28271407 MsG0580025965.01.T01:CDS
CCAAATGACATGGAAGGATT+TGG 0.380420 5:+28271485 MsG0580025965.01.T01:CDS
ATCGACCTTGGTAAATTGTT+AGG 0.381623 5:+28270599 MsG0580025965.01.T01:CDS
AAATAGTTGTGTGTCATATA+TGG 0.393194 5:+28272975 MsG0580025965.01.T01:three_prime_UTR
ACATGAGTAGGGTCTTGATT+TGG 0.394377 5:-28270542 None:intergenic
ATGTTGATGACAAATGCATT+AGG 0.394467 5:-28272332 None:intergenic
AGACCTTGCTTGTAAAGAAT+GGG 0.400804 5:+28270649 MsG0580025965.01.T01:CDS
CTAAATGGTTGGAAAATACT+TGG 0.413891 5:-28271605 None:intergenic
AACGTTGAGGGATCCGCCTC+AGG 0.418162 5:-28273097 None:intergenic
TATTTCTCACGCAAGCTAGA+AGG 0.431799 5:+28272845 MsG0580025965.01.T01:CDS
GGCCTTCTATCTCATTGGCT+TGG 0.437774 5:-28272265 None:intergenic
CTCCAAGCCAATGAGATAGA+AGG 0.438508 5:+28272263 MsG0580025965.01.T01:CDS
TTGCTCGATGTTCAATGCTT+CGG 0.438986 5:-28272676 None:intergenic
AATTTACCAAGGTCGATAAC+TGG 0.453044 5:-28270593 None:intergenic
GCATTAGGGAGGGGTTGAAC+AGG 0.453363 5:-28272317 None:intergenic
CAACACTTCGTTGATTGAAA+AGG 0.453373 5:+28271397 MsG0580025965.01.T01:CDS
TAGACCTTGCTTGTAAAGAA+TGG 0.454171 5:+28270648 MsG0580025965.01.T01:CDS
CATCAACATTGGAGATATGT+TGG 0.457594 5:+28272346 MsG0580025965.01.T01:CDS
TGAACGATGCAGGTCTTTCA+GGG 0.459860 5:-28272790 None:intergenic
CTTTCAGGGGTAACAAGACT+TGG 0.468383 5:-28272776 None:intergenic
AATCATTAGCCAAATGGAAA+AGG 0.476290 5:+28272094 MsG0580025965.01.T01:CDS
TTGCTCTGGAACTTCAATGA+TGG 0.478555 5:-28270510 None:intergenic
TGTTGATGACAAATGCATTA+GGG 0.478792 5:-28272331 None:intergenic
TTTGGACGAAGAAATTGCTC+TGG 0.479151 5:-28270524 None:intergenic
TCTTCTTCTCTTCCACTGGT+AGG 0.479236 5:-28271448 None:intergenic
AGTCTTGTCTTGACGTAATG+AGG 0.481535 5:+28272870 MsG0580025965.01.T01:CDS
CTGAATCCTCATTCTGATGT+TGG 0.486800 5:+28272224 MsG0580025965.01.T01:CDS
AATTTCTTCTTCTCTTCCAC+TGG 0.489167 5:-28271452 None:intergenic
TTTCCATTGCTGCATTTCAC+AGG 0.503120 5:+28272723 MsG0580025965.01.T01:CDS
AATGCATTTGTCATCAACAT+TGG 0.503596 5:+28272335 MsG0580025965.01.T01:CDS
CTATCTCATTGGCTTGGAGA+AGG 0.505113 5:-28272259 None:intergenic
TATTTCTGGCAAAACGTTGA+GGG 0.505270 5:-28273109 None:intergenic
CTGATGATCAGAAATTAGAA+TGG 0.510997 5:+28271525 MsG0580025965.01.T01:CDS
GGGGTAACAAGACTTGGTCT+TGG 0.516646 5:-28272770 None:intergenic
CTCATTGGCTTGGAGAAGGA+TGG 0.518636 5:-28272255 None:intergenic
TAATGAGGTTGGAAAATGAT+GGG 0.520566 5:+28272885 MsG0580025965.01.T01:CDS
TAGAAAACAACCTAAATGGT+TGG 0.522011 5:-28271616 None:intergenic
TGCGTGAGAAATATGCTTTG+AGG 0.529244 5:-28272835 None:intergenic
GGCCTCCAGATAAGAAAAGA+TGG 0.530558 5:+28272284 MsG0580025965.01.T01:CDS
TGATGATCAGAAATTAGAAT+GGG 0.530679 5:+28271526 MsG0580025965.01.T01:CDS
CTAATGGAAGTGTGGTAATG+AGG 0.530737 5:-28271559 None:intergenic
TTGTCTTGACGTAATGAGGT+TGG 0.531648 5:+28272874 MsG0580025965.01.T01:CDS
TCAACGAAGTGTTGACTCCA+TGG 0.533557 5:-28271388 None:intergenic
AACCCCATTCTTTACAAGCA+AGG 0.534883 5:-28270652 None:intergenic
TATATTCTATTGTATTTCTG+AGG 0.537950 5:+28273166 MsG0580025965.01.T01:three_prime_UTR
CCACACTTCCATTAGATGAA+AGG 0.547315 5:+28271567 MsG0580025965.01.T01:CDS
AAAATGGTTGGACTATGCTA+TGG 0.548727 5:+28272919 MsG0580025965.01.T01:exon
GTATTACAGATAGTGACAAA+TGG 0.550244 5:+28272647 MsG0580025965.01.T01:intron
TCGTTCAAAAGCATTGCTGT+TGG 0.557056 5:+28272806 MsG0580025965.01.T01:CDS
AGGGATCCGCCTCAGGCACA+TGG 0.557882 5:-28273090 None:intergenic
ACCGCATTGCTTGAGTAATG+TGG 0.571169 5:-28272157 None:intergenic
TTTGCAAGCTCGTGCACAGA+AGG 0.571239 5:-28270482 None:intergenic
CTTAAAATTGTATTCACATG+AGG 0.572204 5:-28272746 None:intergenic
ATGACAAATGCATTAGGGAG+GGG 0.574452 5:-28272326 None:intergenic
GATGACAAATGCATTAGGGA+GGG 0.581365 5:-28272327 None:intergenic
GTAATGAGGTTGGAAAATGA+TGG 0.587030 5:+28272884 MsG0580025965.01.T01:CDS
AAGGTTTGGAACCTCTCGAT+TGG 0.588147 5:+28270457 MsG0580025965.01.T01:CDS
ATATTTCTGGCAAAACGTTG+AGG 0.589146 5:-28273110 None:intergenic
AGAATTCTTAAGCCTACCAG+TGG 0.596497 5:+28271436 MsG0580025965.01.T01:CDS
GACCTTGCTTGTAAAGAATG+GGG 0.599209 5:+28270650 MsG0580025965.01.T01:CDS
AGATAAGAAAAGATGGACAA+TGG 0.599638 5:+28272291 MsG0580025965.01.T01:CDS
CCTTTCATCTAATGGAAGTG+TGG 0.601777 5:-28271567 None:intergenic
GGTTGTAAGTAATTAACAAG+AGG 0.602371 5:-28273204 None:intergenic
CAAGTACCAGTTATCGACCT+TGG 0.604034 5:+28270587 MsG0580025965.01.T01:CDS
AAAGCACCAACATCAGAATG+AGG 0.605356 5:-28272230 None:intergenic
CAACATTGGAGATATGTTGG+AGG 0.605641 5:+28272349 MsG0580025965.01.T01:CDS
TATAACAAAATAAAATGTCA+AGG 0.607650 5:+28270438 None:intergenic
AAAATACTTGGAAATAAGCG+AGG 0.612315 5:-28271593 None:intergenic
TTGGCAAACTCCAAATGACA+TGG 0.613342 5:+28271475 MsG0580025965.01.T01:CDS
AGGCCTGTGAAATGCAGCAA+TGG 0.613701 5:-28272726 None:intergenic
TCTGTGTTGATGACATGAGT+AGG 0.614512 5:-28270554 None:intergenic
CTGTGTTGATGACATGAGTA+GGG 0.616096 5:-28270553 None:intergenic
CAAACTCCAAATGACATGGA+AGG 0.624198 5:+28271479 MsG0580025965.01.T01:CDS
GAACGATGCAGGTCTTTCAG+GGG 0.639293 5:-28272789 None:intergenic
ACATTACTCAAGCAATGCGG+TGG 0.643434 5:+28272159 MsG0580025965.01.T01:CDS
AATGAGGTTGGAAAATGATG+GGG 0.652045 5:+28272886 MsG0580025965.01.T01:CDS
GTTGATCCATGTGCCTGAGG+CGG 0.654141 5:+28273084 MsG0580025965.01.T01:three_prime_UTR
TTTCTGGTTGAGGACATGGA+GGG 0.655452 5:-28272190 None:intergenic
TGATGACAAATGCATTAGGG+AGG 0.655981 5:-28272328 None:intergenic
TTGGTTGATCCATGTGCCTG+AGG 0.661324 5:+28273081 MsG0580025965.01.T01:three_prime_UTR
CACAGAAGGTACCAATCGAG+AGG 0.663153 5:-28270468 None:intergenic
GGCACATGGATCAACCAACA+TGG 0.680307 5:-28273076 None:intergenic
CTTCACCTAACAATTTACCA+AGG 0.680448 5:-28270604 None:intergenic
CCTATGCAGATAATCAACCA+TGG 0.687142 5:+28271371 MsG0580025965.01.T01:intron
AGGTCGATAACTGGTACTTG+TGG 0.691439 5:-28270584 None:intergenic
TAGTTGTGTGTCATATATGG+TGG 0.730352 5:+28272978 MsG0580025965.01.T01:three_prime_UTR
ACCACATTACTCAAGCAATG+CGG 0.732998 5:+28272156 MsG0580025965.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTAATAAACTTTGATT+AGG + Chr5:28272469-28272488 MsG0580025965.01.T01:intron 10.0%
!!! AGAAATATATGTTTTTTTTA+CGG - Chr5:28270842-28270861 None:intergenic 10.0%
!!! TTTTTTCTAATTTTTACATT+TGG - Chr5:28270818-28270837 None:intergenic 10.0%
!! ACCTTAATCTTTAAATTAAA+TGG + Chr5:28272625-28272644 MsG0580025965.01.T01:intron 15.0%
!! ATAATTCAGTCAATTTAATA+AGG + Chr5:28273009-28273028 MsG0580025965.01.T01:three_prime_UTR 15.0%
!! TATAGATAAAAGTTAATGAA+GGG + Chr5:28271303-28271322 MsG0580025965.01.T01:intron 15.0%
!!! AAAAACATATATTTCTAGAA+AGG + Chr5:28270846-28270865 MsG0580025965.01.T01:intron 15.0%
!!! ACCATTTAATTTAAAGATTA+AGG - Chr5:28272629-28272648 None:intergenic 15.0%
!!! TTTAATTTAAAGATTAAGGT+AGG - Chr5:28272625-28272644 None:intergenic 15.0%
!!! TTTTTCATATATGAAATGTA+AGG + Chr5:28273140-28273159 MsG0580025965.01.T01:three_prime_UTR 15.0%
!! AACTTACATAAGTAATTTCA+AGG - Chr5:28270723-28270742 None:intergenic 20.0%
!! ATTTGTCTATATGATAATCA+TGG - Chr5:28270761-28270780 None:intergenic 20.0%
!! CTATAGATAAAAGTTAATGA+AGG + Chr5:28271302-28271321 MsG0580025965.01.T01:intron 20.0%
!! GAAATAACAAAAGAAATTAG+AGG + Chr5:28271862-28271881 MsG0580025965.01.T01:intron 20.0%
!! GATTAATAATAATTCAAACC+TGG - Chr5:28270682-28270701 None:intergenic 20.0%
!! TATGTAAGTTGCAAAATAAA+TGG + Chr5:28270733-28270752 MsG0580025965.01.T01:intron 20.0%
!!! AAATAATTCTGTTACTTCAT+TGG - Chr5:28272135-28272154 None:intergenic 20.0%
!!! ATTCAATCATTTTGTTCTAA+AGG - Chr5:28271975-28271994 None:intergenic 20.0%
!!! CACAACTATTTTTATTCAAA+TGG - Chr5:28272966-28272985 None:intergenic 20.0%
!!! TATATTCTATTGTATTTCTG+AGG + Chr5:28273166-28273185 MsG0580025965.01.T01:three_prime_UTR 20.0%
!!! TGCAAAATTTGTCTAAAATT+CGG - Chr5:28271944-28271963 None:intergenic 20.0%
! AAATAGTTGTGTGTCATATA+TGG + Chr5:28272975-28272994 MsG0580025965.01.T01:three_prime_UTR 25.0%
! AACTAACTAACTTTGATTGA+AGG + Chr5:28272495-28272514 MsG0580025965.01.T01:intron 25.0%
! ATATCTCCTTAATTCAACTT+TGG + Chr5:28272563-28272582 MsG0580025965.01.T01:intron 25.0%
! CAATAAGTTGTGATATATGT+TGG + Chr5:28270980-28270999 MsG0580025965.01.T01:intron 25.0%
! CACTAATTAACAAATTGACA+TGG + Chr5:28272010-28272029 MsG0580025965.01.T01:intron 25.0%
! CTTAAAATTGTATTCACATG+AGG - Chr5:28272749-28272768 None:intergenic 25.0%
! GAAAAACAACCAAATATTTC+TGG - Chr5:28273126-28273145 None:intergenic 25.0%
! TGATGATCAGAAATTAGAAT+GGG + Chr5:28271526-28271545 MsG0580025965.01.T01:CDS 25.0%
! TTATGAATATGTCATTCAAC+AGG + Chr5:28271249-28271268 MsG0580025965.01.T01:intron 25.0%
! TTGATTGAAAAGGTAAAGAT+AGG + Chr5:28271407-28271426 MsG0580025965.01.T01:CDS 25.0%
!! GTAATTAACAAGAGGTTTTA+CGG - Chr5:28273199-28273218 None:intergenic 25.0%
!! TTTTACAATCATTAGCCAAA+TGG + Chr5:28272088-28272107 MsG0580025965.01.T01:CDS 25.0%
AAAATACTTGGAAATAAGCG+AGG - Chr5:28271596-28271615 None:intergenic 30.0%
AAAATGTGTTCAATACAACG+TGG + Chr5:28271718-28271737 MsG0580025965.01.T01:intron 30.0%
AAGAGTCCAAAGTTGAATTA+AGG - Chr5:28272572-28272591 None:intergenic 30.0%
AATCATTAGCCAAATGGAAA+AGG + Chr5:28272094-28272113 MsG0580025965.01.T01:CDS 30.0%
AATGCATTTGTCATCAACAT+TGG + Chr5:28272335-28272354 MsG0580025965.01.T01:CDS 30.0%
ACATGCAAGTTTATACATAG+CGG - Chr5:28270928-28270947 None:intergenic 30.0%
AGAGTAGAAAACAACCTAAA+TGG - Chr5:28271623-28271642 None:intergenic 30.0%
AGATAAGAAAAGATGGACAA+TGG + Chr5:28272291-28272310 MsG0580025965.01.T01:CDS 30.0%
ATGGGGTTAAAAACTGAAAA+TGG + Chr5:28272903-28272922 MsG0580025965.01.T01:exon 30.0%
ATTTAATTGTTGACCAATGC+AGG - Chr5:28271017-28271036 None:intergenic 30.0%
CTAAATGGTTGGAAAATACT+TGG - Chr5:28271608-28271627 None:intergenic 30.0%
CTGATGATCAGAAATTAGAA+TGG + Chr5:28271525-28271544 MsG0580025965.01.T01:CDS 30.0%
GGTTAAAAACTGAAAATGGT+TGG + Chr5:28272907-28272926 MsG0580025965.01.T01:exon 30.0%
GGTTGTAAGTAATTAACAAG+AGG - Chr5:28273207-28273226 None:intergenic 30.0%
GTATAAACTTGCATGTTGAA+CGG + Chr5:28270932-28270951 MsG0580025965.01.T01:intron 30.0%
GTATGATAACCATATAGTCT+TGG - Chr5:28271222-28271241 None:intergenic 30.0%
GTATTACAGATAGTGACAAA+TGG + Chr5:28272647-28272666 MsG0580025965.01.T01:intron 30.0%
TAATGAGGTTGGAAAATGAT+GGG + Chr5:28272885-28272904 MsG0580025965.01.T01:CDS 30.0%
TAGAAAACAACCTAAATGGT+TGG - Chr5:28271619-28271638 None:intergenic 30.0%
TTTAATTGTTGACCAATGCA+GGG - Chr5:28271016-28271035 None:intergenic 30.0%
! AACGTTTTGCCAGAAATATT+TGG + Chr5:28273114-28273133 MsG0580025965.01.T01:three_prime_UTR 30.0%
! ATTGTCCATCTTTTCTTATC+TGG - Chr5:28272292-28272311 None:intergenic 30.0%
! CAAGTATTTTCCAACCATTT+AGG + Chr5:28271606-28271625 MsG0580025965.01.T01:CDS 30.0%
! GTTTTTATTCTTCACCATGT+TGG + Chr5:28273062-28273081 MsG0580025965.01.T01:three_prime_UTR 30.0%
! TGGAAGAGAAGAAGAAATTT+TGG + Chr5:28271456-28271475 MsG0580025965.01.T01:CDS 30.0%
! TTCAGTCCAATAACATTTTC+TGG - Chr5:28272209-28272228 None:intergenic 30.0%
!! ATGTTGATGACAAATGCATT+AGG - Chr5:28272335-28272354 None:intergenic 30.0%
!! TGTTGATGACAAATGCATTA+GGG - Chr5:28272334-28272353 None:intergenic 30.0%
!!! CAATCATTTTGTTCTAAAGG+TGG - Chr5:28271972-28271991 None:intergenic 30.0%
AAAATGGTTGGACTATGCTA+TGG + Chr5:28272919-28272938 MsG0580025965.01.T01:exon 35.0%
AATGAGGTTGGAAAATGATG+GGG + Chr5:28272886-28272905 MsG0580025965.01.T01:CDS 35.0%
AATTTACCAAGGTCGATAAC+TGG - Chr5:28270596-28270615 None:intergenic 35.0%
AATTTCTTCTTCTCTTCCAC+TGG - Chr5:28271455-28271474 None:intergenic 35.0%
AGACCTTGCTTGTAAAGAAT+GGG + Chr5:28270649-28270668 MsG0580025965.01.T01:CDS 35.0%
ATCGACCTTGGTAAATTGTT+AGG + Chr5:28270599-28270618 MsG0580025965.01.T01:CDS 35.0%
CATCAACATTGGAGATATGT+TGG + Chr5:28272346-28272365 MsG0580025965.01.T01:CDS 35.0%
CATGCAAGTTTATACATAGC+GGG - Chr5:28270927-28270946 None:intergenic 35.0%
CCTCAACCAGAAAATGTTAT+TGG + Chr5:28272200-28272219 MsG0580025965.01.T01:CDS 35.0%
CTGAAAACTAACTCATAACG+TGG - Chr5:28271812-28271831 None:intergenic 35.0%
CTTCACCTAACAATTTACCA+AGG - Chr5:28270607-28270626 None:intergenic 35.0%
CTTTGCTCATGAATTAGCAA+AGG - Chr5:28271785-28271804 None:intergenic 35.0%
GTAATGAGGTTGGAAAATGA+TGG + Chr5:28272884-28272903 MsG0580025965.01.T01:CDS 35.0%
TAGACCTTGCTTGTAAAGAA+TGG + Chr5:28270648-28270667 MsG0580025965.01.T01:CDS 35.0%
TAGTTGTGTGTCATATATGG+TGG + Chr5:28272978-28272997 MsG0580025965.01.T01:three_prime_UTR 35.0%
TCACAACTTATTGTCATTCG+TGG - Chr5:28270973-28270992 None:intergenic 35.0%
TGATATTTGTGTATGCTGTG+TGG - Chr5:28271280-28271299 None:intergenic 35.0%
TGCTAATTCATGAGCAAAGA+CGG + Chr5:28271786-28271805 MsG0580025965.01.T01:intron 35.0%
! CAACACTTCGTTGATTGAAA+AGG + Chr5:28271397-28271416 MsG0580025965.01.T01:CDS 35.0%
!! ACTGATTTGCCAAGACTATA+TGG + Chr5:28271210-28271229 MsG0580025965.01.T01:intron 35.0%
!! ATATTTCTGGCAAAACGTTG+AGG - Chr5:28273113-28273132 None:intergenic 35.0%
!! TATTTCTGGCAAAACGTTGA+GGG - Chr5:28273112-28273131 None:intergenic 35.0%
!! TTATACATAGCGGGTTAAAC+TGG - Chr5:28270918-28270937 None:intergenic 35.0%
!!! CCAATAACATTTTCTGGTTG+AGG - Chr5:28272203-28272222 None:intergenic 35.0%
!!! TAAAGAATGGGGTTTTTTCC+AGG + Chr5:28270661-28270680 MsG0580025965.01.T01:CDS 35.0%
AACCCCATTCTTTACAAGCA+AGG - Chr5:28270655-28270674 None:intergenic 40.0%
AAGGCTGCTACGTACTAAAT+AGG + Chr5:28273028-28273047 MsG0580025965.01.T01:three_prime_UTR 40.0%
ACATGAGTAGGGTCTTGATT+TGG - Chr5:28270545-28270564 None:intergenic 40.0%
ACCACATTACTCAAGCAATG+CGG + Chr5:28272156-28272175 MsG0580025965.01.T01:CDS 40.0%
AGAATTCTTAAGCCTACCAG+TGG + Chr5:28271436-28271455 MsG0580025965.01.T01:CDS 40.0%
ATGACAAATGCATTAGGGAG+GGG - Chr5:28272329-28272348 None:intergenic 40.0%
ATGTGTTCAATACAACGTGG+TGG + Chr5:28271721-28271740 MsG0580025965.01.T01:intron 40.0%
CAAACTCCAAATGACATGGA+AGG + Chr5:28271479-28271498 MsG0580025965.01.T01:CDS 40.0%
CAACATTGGAGATATGTTGG+AGG + Chr5:28272349-28272368 MsG0580025965.01.T01:CDS 40.0%
CCAAATCCTTCCATGTCATT+TGG - Chr5:28271488-28271507 None:intergenic 40.0%
CCAAATGACATGGAAGGATT+TGG + Chr5:28271485-28271504 MsG0580025965.01.T01:CDS 40.0%
CCACACTTCCATTAGATGAA+AGG + Chr5:28271567-28271586 MsG0580025965.01.T01:CDS 40.0%
CCATGGTTGATTATCTGCAT+AGG - Chr5:28271374-28271393 None:intergenic 40.0%
CCTATGCAGATAATCAACCA+TGG + Chr5:28271371-28271390 MsG0580025965.01.T01:intron 40.0%
CCTTTCATCTAATGGAAGTG+TGG - Chr5:28271570-28271589 None:intergenic 40.0%
CGAGGATTCCTTTCATCTAA+TGG - Chr5:28271578-28271597 None:intergenic 40.0%
CTGAATCCTCATTCTGATGT+TGG + Chr5:28272224-28272243 MsG0580025965.01.T01:CDS 40.0%
GACCTTGCTTGTAAAGAATG+GGG + Chr5:28270650-28270669 MsG0580025965.01.T01:CDS 40.0%
GATGACAAATGCATTAGGGA+GGG - Chr5:28272330-28272349 None:intergenic 40.0%
GGAGATATGTTGGAGGTAAT+TGG + Chr5:28272356-28272375 MsG0580025965.01.T01:intron 40.0%
TATTTCTCACGCAAGCTAGA+AGG + Chr5:28272845-28272864 MsG0580025965.01.T01:CDS 40.0%
TGATGACAAATGCATTAGGG+AGG - Chr5:28272331-28272350 None:intergenic 40.0%
TGCGTGAGAAATATGCTTTG+AGG - Chr5:28272838-28272857 None:intergenic 40.0%
TTGCTCGATGTTCAATGCTT+CGG - Chr5:28272679-28272698 None:intergenic 40.0%
TTGGCAAACTCCAAATGACA+TGG + Chr5:28271475-28271494 MsG0580025965.01.T01:CDS 40.0%
TTGTCTTGACGTAATGAGGT+TGG + Chr5:28272874-28272893 MsG0580025965.01.T01:CDS 40.0%
TTTCCATTGCTGCATTTCAC+AGG + Chr5:28272723-28272742 MsG0580025965.01.T01:CDS 40.0%
TTTGGACGAAGAAATTGCTC+TGG - Chr5:28270527-28270546 None:intergenic 40.0%
! AAAGCACCAACATCAGAATG+AGG - Chr5:28272233-28272252 None:intergenic 40.0%
! AGGAGTTAGTTTCCAGATTG+TGG - Chr5:28271752-28271771 None:intergenic 40.0%
! AGTCTTGTCTTGACGTAATG+AGG + Chr5:28272870-28272889 MsG0580025965.01.T01:CDS 40.0%
! CTAATGGAAGTGTGGTAATG+AGG - Chr5:28271562-28271581 None:intergenic 40.0%
! GTCCATCTTTTCTTATCTGG+AGG - Chr5:28272289-28272308 None:intergenic 40.0%
! TCTTGAGAGCCTTTTCCATT+TGG - Chr5:28272106-28272125 None:intergenic 40.0%
!! CTGTGTTGATGACATGAGTA+GGG - Chr5:28270556-28270575 None:intergenic 40.0%
!! TCGTTCAAAAGCATTGCTGT+TGG + Chr5:28272806-28272825 MsG0580025965.01.T01:CDS 40.0%
!! TCTGTGTTGATGACATGAGT+AGG - Chr5:28270557-28270576 None:intergenic 40.0%
!! TTGCTCTGGAACTTCAATGA+TGG - Chr5:28270513-28270532 None:intergenic 40.0%
!!! ACATTTTCTGGTTGAGGACA+TGG - Chr5:28272197-28272216 None:intergenic 40.0%
ACATTACTCAAGCAATGCGG+TGG + Chr5:28272159-28272178 MsG0580025965.01.T01:CDS 45.0%
ACCGCATTGCTTGAGTAATG+TGG - Chr5:28272160-28272179 None:intergenic 45.0%
AGGTCGATAACTGGTACTTG+TGG - Chr5:28270587-28270606 None:intergenic 45.0%
CAAGTACCAGTTATCGACCT+TGG + Chr5:28270587-28270606 MsG0580025965.01.T01:CDS 45.0%
CTCCAAGCCAATGAGATAGA+AGG + Chr5:28272263-28272282 MsG0580025965.01.T01:CDS 45.0%
CTGGAAACTAACTCCTATCG+TGG + Chr5:28271756-28271775 MsG0580025965.01.T01:intron 45.0%
CTTTCAGGGGTAACAAGACT+TGG - Chr5:28272779-28272798 None:intergenic 45.0%
GGCCTCCAGATAAGAAAAGA+TGG + Chr5:28272284-28272303 MsG0580025965.01.T01:CDS 45.0%
TCTTCTTCTCTTCCACTGGT+AGG - Chr5:28271451-28271470 None:intergenic 45.0%
TGAACGATGCAGGTCTTTCA+GGG - Chr5:28272793-28272812 None:intergenic 45.0%
TTGAACGATGCAGGTCTTTC+AGG - Chr5:28272794-28272813 None:intergenic 45.0%
! AAGGTTTGGAACCTCTCGAT+TGG + Chr5:28270457-28270476 MsG0580025965.01.T01:CDS 45.0%
! GCAATGCTTTTGAACGATGC+AGG - Chr5:28272803-28272822 None:intergenic 45.0%
!! CTATCTCATTGGCTTGGAGA+AGG - Chr5:28272262-28272281 None:intergenic 45.0%
!! TCAACGAAGTGTTGACTCCA+TGG - Chr5:28271391-28271410 None:intergenic 45.0%
!! TTTCTGGTTGAGGACATGGA+GGG - Chr5:28272193-28272212 None:intergenic 45.0%
!!! TTTTCTGGTTGAGGACATGG+AGG - Chr5:28272194-28272213 None:intergenic 45.0%
!! TTCAAAAATAAAAAAAAAAT+TGG - Chr5:28271911-28271930 None:intergenic 5.0%
AGGCCTGTGAAATGCAGCAA+TGG - Chr5:28272729-28272748 None:intergenic 50.0%
CTGGAGGCCTTCTATCTCAT+TGG - Chr5:28272273-28272292 None:intergenic 50.0%
GAACGATGCAGGTCTTTCAG+GGG - Chr5:28272792-28272811 None:intergenic 50.0%
GGCACATGGATCAACCAACA+TGG - Chr5:28273079-28273098 None:intergenic 50.0%
TTAGCAAAGGCGACCACGAT+AGG - Chr5:28271772-28271791 None:intergenic 50.0%
TTGGTTGATCCATGTGCCTG+AGG + Chr5:28273081-28273100 MsG0580025965.01.T01:three_prime_UTR 50.0%
TTTGCAAGCTCGTGCACAGA+AGG - Chr5:28270485-28270504 None:intergenic 50.0%
! GGCCTTCTATCTCATTGGCT+TGG - Chr5:28272268-28272287 None:intergenic 50.0%
! GGGGTAACAAGACTTGGTCT+TGG - Chr5:28272773-28272792 None:intergenic 50.0%
! GTGGTGGAGTAACCACAATC+TGG + Chr5:28271737-28271756 MsG0580025965.01.T01:intron 50.0%
!! CACAGAAGGTACCAATCGAG+AGG - Chr5:28270471-28270490 None:intergenic 50.0%
!! CTCATTGGCTTGGAGAAGGA+TGG - Chr5:28272258-28272277 None:intergenic 50.0%
GCATTAGGGAGGGGTTGAAC+AGG - Chr5:28272320-28272339 None:intergenic 55.0%
GTTGATCCATGTGCCTGAGG+CGG + Chr5:28273084-28273103 MsG0580025965.01.T01:three_prime_UTR 55.0%
TGACCAATGCAGGGCAGACT+CGG - Chr5:28271007-28271026 None:intergenic 55.0%
AACGTTGAGGGATCCGCCTC+AGG - Chr5:28273100-28273119 None:intergenic 60.0%
GACCAATGCAGGGCAGACTC+GGG - Chr5:28271006-28271025 None:intergenic 60.0%
AGGGATCCGCCTCAGGCACA+TGG - Chr5:28273093-28273112 None:intergenic 65.0%
GGCCCGAGTCTGCCCTGCAT+TGG + Chr5:28271001-28271020 MsG0580025965.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 28270452 28273244 28270452 ID=MsG0580025965.01;Name=MsG0580025965.01
Chr5 mRNA 28270452 28273244 28270452 ID=MsG0580025965.01.T01;Parent=MsG0580025965.01;Name=MsG0580025965.01.T01;_AED=0.27;_eAED=0.27;_QI=0|0.66|0.25|1|1|1|4|325|355
Chr5 exon 28272656 28273244 28272656 ID=MsG0580025965.01.T01:exon:28861;Parent=MsG0580025965.01.T01
Chr5 exon 28272046 28272370 28272046 ID=MsG0580025965.01.T01:exon:28860;Parent=MsG0580025965.01.T01
Chr5 exon 28271380 28271627 28271380 ID=MsG0580025965.01.T01:exon:28859;Parent=MsG0580025965.01.T01
Chr5 exon 28270452 28270682 28270452 ID=MsG0580025965.01.T01:exon:28858;Parent=MsG0580025965.01.T01
Chr5 CDS 28270452 28270682 28270452 ID=MsG0580025965.01.T01:cds;Parent=MsG0580025965.01.T01
Chr5 CDS 28271380 28271627 28271380 ID=MsG0580025965.01.T01:cds;Parent=MsG0580025965.01.T01
Chr5 CDS 28272046 28272370 28272046 ID=MsG0580025965.01.T01:cds;Parent=MsG0580025965.01.T01
Chr5 CDS 28272656 28272919 28272656 ID=MsG0580025965.01.T01:cds;Parent=MsG0580025965.01.T01
Chr5 three_prime_UTR 28272920 28273244 28272920 ID=MsG0580025965.01.T01:three_prime_utr;Parent=MsG0580025965.01.T01
Gene Sequence

>MsG0580025965.01.T01

ATGTCAAGGTTTGGAACCTCTCGATTGGTACCTTCTGTGCACGAGCTTGCAAAGCAAGCCATCATTGAAGTTCCAGAGCAATTTCTTCGTCCAAATCAAGACCCTACTCATGTCATCAACACAGACTCATTACCACAAGTACCAGTTATCGACCTTGGTAAATTGTTAGGTGAAGATGCAACTGAGCTAGAGAAGCTAGACCTTGCTTGTAAAGAATGGGGTTTTTTCCAGATAATCAACCATGGAGTCAACACTTCGTTGATTGAAAAGGTAAAGATAGGTATTAAAGAATTCTTAAGCCTACCAGTGGAAGAGAAGAAGAAATTTTGGCAAACTCCAAATGACATGGAAGGATTTGGTCAGATGTTTGTTGTCTCTGATGATCAGAAATTAGAATGGGCTGATCTTTTCCTCATTACCACACTTCCATTAGATGAAAGGAATCCTCGCTTATTTCCAAGTATTTTCCAACCATTTAGAGATAATTTAGAGATCTATTGTTCAGAAGTACAAAAACTTTGTTTTACAATCATTAGCCAAATGGAAAAGGCTCTCAAGATTGAATCCAATGAAGTAACAGAATTATTTAACCACATTACTCAAGCAATGCGGTGGAATTTGTACCCTCCATGTCCTCAACCAGAAAATGTTATTGGACTGAATCCTCATTCTGATGTTGGTGCTTTAACCATCCTTCTCCAAGCCAATGAGATAGAAGGCCTCCAGATAAGAAAAGATGGACAATGGATTCCTGTTCAACCCCTCCCTAATGCATTTGTCATCAACATTGGAGATATGTTGGAGATAGTGACAAATGGAATATACCGAAGCATTGAACATCGAGCAACAGTTAATTCTGAAAAAGAAAGAATTTCCATTGCTGCATTTCACAGGCCTCATGTGAATACAATTTTAAGTCCAAGACCAAGTCTTGTTACCCCTGAAAGACCTGCATCGTTCAAAAGCATTGCTGTTGGAGATTACCTCAAAGCATATTTCTCACGCAAGCTAGAAGGAAAGTCTTGTCTTGACGTAATGAGGTTGGAAAATGATGGGGTTAAAAACTGA

Protein sequence

>MsG0580025965.01.T01

MSRFGTSRLVPSVHELAKQAIIEVPEQFLRPNQDPTHVINTDSLPQVPVIDLGKLLGEDATELEKLDLACKEWGFFQIINHGVNTSLIEKVKIGIKEFLSLPVEEKKKFWQTPNDMEGFGQMFVVSDDQKLEWADLFLITTLPLDERNPRLFPSIFQPFRDNLEIYCSEVQKLCFTIISQMEKALKIESNEVTELFNHITQAMRWNLYPPCPQPENVIGLNPHSDVGALTILLQANEIEGLQIRKDGQWIPVQPLPNAFVINIGDMLEIVTNGIYRSIEHRATVNSEKERISIAAFHRPHVNTILSPRPSLVTPERPASFKSIAVGDYLKAYFSRKLEGKSCLDVMRLENDGVKN*