AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047206.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047206.01.T01 MTR_4g122950 97.115 208 6 0 1 208 271 478 1.67e-150 427
MsG0880047206.01.T01 MTR_4g122960 83.654 208 32 1 1 208 271 476 2.58e-123 357
MsG0880047206.01.T01 MTR_2g012860 45.283 212 104 3 1 210 275 476 1.94e-59 194
MsG0880047206.01.T01 MTR_2g012850 42.857 210 112 2 1 210 267 468 6.24e-56 184
MsG0880047206.01.T01 MTR_4g089155 43.810 210 110 3 1 210 287 488 7.99e-56 184
MsG0880047206.01.T01 MTR_4g075150 43.478 207 105 4 1 207 269 463 4.12e-51 172
MsG0880047206.01.T01 MTR_4g075150 42.512 207 105 4 1 207 269 461 2.74e-50 169
MsG0880047206.01.T01 MTR_7g013790 42.584 209 102 3 6 209 271 466 4.34e-50 169
MsG0880047206.01.T01 MTR_2g062990 42.289 201 99 4 11 211 283 466 2.56e-48 164
MsG0880047206.01.T01 MTR_2g063000 40.000 205 106 2 7 211 249 436 3.24e-47 161
MsG0880047206.01.T01 MTR_2g063000 40.796 201 102 2 11 211 284 467 5.95e-47 160
MsG0880047206.01.T01 MTR_2g062980 39.904 208 108 3 4 211 276 466 7.71e-47 160
MsG0880047206.01.T01 MTR_3g079600 40.865 208 97 5 4 211 314 495 1.38e-43 152
MsG0880047206.01.T01 MTR_2g081620 39.024 205 108 3 7 211 280 467 1.88e-43 151
MsG0880047206.01.T01 MTR_3g034290 39.048 210 104 5 2 210 307 493 4.14e-43 151
MsG0880047206.01.T01 MTR_3g079590 41.627 209 96 5 3 211 311 493 9.33e-43 150
MsG0880047206.01.T01 MTR_3g079560 39.806 206 98 5 3 208 312 491 1.20e-42 150
MsG0880047206.01.T01 MTR_1g095560 39.899 198 102 3 11 208 277 457 3.50e-42 148
MsG0880047206.01.T01 MTR_1g021010 38.725 204 90 4 10 210 318 489 3.68e-42 148
MsG0880047206.01.T01 MTR_3g079620 39.720 214 94 6 4 208 312 499 4.12e-42 149
MsG0880047206.01.T01 MTR_1g095540 38.889 198 104 2 11 208 277 457 1.28e-41 146
MsG0880047206.01.T01 MTR_1g021020 37.931 203 91 4 11 210 320 490 1.39e-41 147
MsG0880047206.01.T01 MTR_1g020090 39.196 199 90 4 11 209 332 499 2.40e-41 146
MsG0880047206.01.T01 MTR_3g079570 40.670 209 97 6 3 211 312 493 2.75e-41 146
MsG0880047206.01.T01 MTR_0003s0560 37.321 209 107 5 3 210 305 490 3.50e-38 138
MsG0880047206.01.T01 MTR_1g095560 33.913 230 103 4 11 208 277 489 2.74e-36 132
MsG0880047206.01.T01 MTR_3g079630 39.437 213 90 8 10 211 318 502 6.20e-34 126
MsG0880047206.01.T01 MTR_3g090130 34.831 178 106 5 42 211 286 461 1.48e-29 114
MsG0880047206.01.T01 MTR_5g072570 35.556 180 106 5 40 211 289 466 1.23e-28 112
MsG0880047206.01.T01 MTR_3g090150 34.444 180 108 5 40 211 291 468 1.20e-27 109
MsG0880047206.01.T01 MTR_3g498755 31.707 205 116 6 11 209 261 447 1.84e-24 100
MsG0880047206.01.T01 MTR_3g434850 32.184 174 106 6 43 209 288 456 5.25e-23 96.3
MsG0880047206.01.T01 MTR_7g080180 28.511 235 132 7 1 206 271 498 5.35e-22 93.6
MsG0880047206.01.T01 MTR_1g102130 30.968 155 99 3 58 207 339 490 7.49e-22 93.2
MsG0880047206.01.T01 MTR_7g021130 31.944 216 116 8 1 207 264 457 8.88e-22 92.8
MsG0880047206.01.T01 MTR_8g099930 36.943 157 87 6 58 207 311 462 3.20e-21 91.3
MsG0880047206.01.T01 MTR_2g449850 32.051 156 98 3 58 208 311 463 3.84e-21 90.9
MsG0880047206.01.T01 MTR_1g040370 30.968 155 97 3 58 207 266 415 7.00e-21 89.7
MsG0880047206.01.T01 MTR_8g011350 25.974 231 139 7 1 203 266 492 4.30e-19 85.1
MsG0880047206.01.T01 MTR_7g051430 27.354 223 129 7 10 203 274 492 2.17e-18 83.2
MsG0880047206.01.T01 MTR_3g100420 30.435 138 90 3 70 206 364 496 1.83e-15 74.7
MsG0880047206.01.T01 MTR_4g021535 29.319 191 119 7 3 190 226 403 1.22e-14 72.0
MsG0880047206.01.T01 MTR_4g021535 29.319 191 119 7 3 190 273 450 1.63e-14 72.0
MsG0880047206.01.T01 MTR_4g021500 30.233 129 83 3 70 197 339 461 5.05e-14 70.5
MsG0880047206.01.T01 MTR_4g021500 30.233 129 83 3 70 197 339 461 5.07e-14 70.5
MsG0880047206.01.T01 MTR_4g021500 26.866 134 91 3 70 202 774 901 9.64e-11 61.2
MsG0880047206.01.T01 MTR_4g021490 25.123 203 136 7 3 202 277 466 1.07e-13 69.3
MsG0880047206.01.T01 MTR_3g034290 32.800 125 61 4 2 126 307 408 1.99e-13 68.6
MsG0880047206.01.T01 MTR_4g021520 28.058 139 93 3 65 202 334 466 3.59e-13 67.8
MsG0880047206.01.T01 MTR_4g021510 29.851 134 87 3 65 197 333 460 1.24e-12 66.2
MsG0880047206.01.T01 MTR_4g021530 26.601 203 133 7 3 202 277 466 2.55e-12 65.5
MsG0880047206.01.T01 MTR_2g018600 31.818 88 59 1 116 202 378 465 1.57e-11 63.2
MsG0880047206.01.T01 MTR_2g018590 26.351 148 102 4 61 206 327 469 3.21e-11 62.4
MsG0880047206.01.T01 MTR_2g018630 27.612 134 91 3 70 202 228 356 5.53e-11 61.2
MsG0880047206.01.T01 MTR_3g045770 26.562 128 87 2 80 202 325 450 8.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047206.01.T01 AT3G17180 66.029 209 66 3 1 208 272 476 1.28e-91 276
MsG0880047206.01.T01 AT3G17180 63.190 163 56 2 1 163 272 430 4.03e-65 207
MsG0880047206.01.T01 AT1G11080 48.113 212 102 3 1 210 287 492 2.11e-61 199
MsG0880047206.01.T01 AT1G11080 48.113 212 102 3 1 210 287 492 2.38e-61 199
MsG0880047206.01.T01 AT4G15100 46.262 214 103 4 1 210 279 484 1.76e-60 196
MsG0880047206.01.T01 AT1G61130 45.283 212 100 3 1 210 266 463 3.83e-60 195
MsG0880047206.01.T01 AT4G30610 44.554 202 103 3 6 207 270 462 9.41e-55 181
MsG0880047206.01.T01 AT5G23210 42.857 217 113 5 1 209 188 401 1.39e-50 169
MsG0880047206.01.T01 AT5G23210 42.857 217 113 5 1 209 189 402 1.73e-50 169
MsG0880047206.01.T01 AT5G23210 42.857 217 113 5 1 209 284 497 1.04e-49 169
MsG0880047206.01.T01 AT2G24000 44.554 202 101 5 7 206 205 397 1.98e-49 166
MsG0880047206.01.T01 AT2G24000 44.554 202 101 5 7 206 268 460 6.35e-49 166
MsG0880047206.01.T01 AT3G02110 42.574 202 113 2 6 207 273 471 5.04e-48 164
MsG0880047206.01.T01 AT2G24010 39.024 205 106 3 4 207 280 466 3.21e-46 159
MsG0880047206.01.T01 AT2G24010 39.024 205 106 3 4 207 265 451 3.48e-46 158
MsG0880047206.01.T01 AT5G08260 42.157 204 112 4 8 210 281 479 3.92e-46 159
MsG0880047206.01.T01 AT2G24010 39.024 205 106 3 4 207 276 462 5.33e-46 158
MsG0880047206.01.T01 AT3G07990 41.624 197 98 5 11 207 278 457 1.13e-41 147
MsG0880047206.01.T01 AT4G30810 38.889 198 107 2 11 208 280 463 1.02e-40 144
MsG0880047206.01.T01 AT3G63470 37.374 198 102 4 11 207 321 497 1.67e-39 141
MsG0880047206.01.T01 AT2G35780 39.086 197 105 3 11 207 270 451 2.52e-39 140
MsG0880047206.01.T01 AT2G35770 36.019 211 111 6 1 208 270 459 2.13e-33 124
MsG0880047206.01.T01 AT2G05850 34.328 201 107 5 11 207 305 484 4.05e-31 119
MsG0880047206.01.T01 AT3G52000 33.663 202 111 4 9 207 298 479 8.49e-30 115
MsG0880047206.01.T01 AT3G52010 32.500 200 112 4 11 207 305 484 8.54e-29 112
MsG0880047206.01.T01 AT1G43780 31.839 223 133 7 5 211 255 474 8.80e-29 112
MsG0880047206.01.T01 AT5G23210 36.842 171 97 5 1 163 188 355 1.07e-28 110
MsG0880047206.01.T01 AT3G52020 32.195 205 116 6 7 207 313 498 2.61e-28 111
MsG0880047206.01.T01 AT5G23210 36.842 171 97 5 1 163 284 451 3.55e-28 110
MsG0880047206.01.T01 AT5G42240 36.000 175 103 5 40 207 292 464 3.11e-26 105
MsG0880047206.01.T01 AT2G12480 33.714 175 107 5 40 207 285 457 4.75e-24 99.4
MsG0880047206.01.T01 AT2G33530 31.068 206 112 6 11 207 278 462 3.90e-23 96.7
MsG0880047206.01.T01 AT5G42230 34.857 175 97 7 44 207 292 460 8.57e-23 95.5
MsG0880047206.01.T01 AT5G42230 34.857 175 97 7 44 207 292 460 8.57e-23 95.5
MsG0880047206.01.T01 AT2G12480 34.615 156 94 5 58 207 280 433 1.77e-21 91.7
MsG0880047206.01.T01 AT4G12910 28.755 233 132 9 2 206 271 497 7.61e-21 90.1
MsG0880047206.01.T01 AT2G12480 32.903 155 96 5 58 207 280 431 9.58e-21 89.7
MsG0880047206.01.T01 AT1G28110 31.163 215 119 6 1 207 265 458 1.56e-20 89.4
MsG0880047206.01.T01 AT1G28110 31.163 215 119 6 1 207 265 458 1.56e-20 89.4
MsG0880047206.01.T01 AT3G25420 29.596 223 125 8 11 206 277 494 3.45e-20 88.2
MsG0880047206.01.T01 AT2G12480 32.692 156 96 6 58 207 280 432 4.09e-19 85.1
MsG0880047206.01.T01 AT2G22960 30.469 128 85 3 80 206 60 184 3.54e-14 68.6
MsG0880047206.01.T01 AT2G24010 29.839 124 68 3 4 126 251 356 3.85e-13 67.8
MsG0880047206.01.T01 AT1G73270 32.479 117 75 3 91 206 328 441 1.95e-12 65.9
MsG0880047206.01.T01 AT1G73270 32.479 117 75 3 91 206 328 441 2.19e-12 65.9
MsG0880047206.01.T01 AT3G12203 26.630 184 111 5 44 206 199 379 2.22e-12 65.5
MsG0880047206.01.T01 AT2G22990 28.169 142 95 4 66 206 184 319 2.73e-12 65.1
MsG0880047206.01.T01 AT3G12203 26.630 184 111 5 44 206 236 416 3.00e-12 65.1
MsG0880047206.01.T01 AT1G73280 30.469 128 85 3 80 206 190 314 3.26e-12 64.7
MsG0880047206.01.T01 AT3G12203 26.630 184 111 5 44 206 257 437 3.56e-12 65.1
MsG0880047206.01.T01 AT1G73280 30.469 128 85 3 80 206 215 339 4.27e-12 64.7
MsG0880047206.01.T01 AT2G22990 28.169 142 95 4 66 206 298 433 7.71e-12 63.9
MsG0880047206.01.T01 AT1G73280 30.469 128 85 3 80 206 317 441 8.47e-12 63.9
MsG0880047206.01.T01 AT2G22990 27.465 142 96 4 66 206 184 319 9.68e-12 63.5
MsG0880047206.01.T01 AT2G22990 27.465 142 96 4 66 206 289 424 2.81e-11 62.4
MsG0880047206.01.T01 AT5G36180 28.492 179 111 7 37 206 169 339 5.72e-11 61.2
MsG0880047206.01.T01 AT5G36180 28.492 179 111 7 37 206 169 339 5.72e-11 61.2
MsG0880047206.01.T01 AT2G22970 28.261 138 93 4 70 206 301 433 7.88e-11 61.2
MsG0880047206.01.T01 AT4G12910 25.654 191 109 8 2 165 271 455 9.56e-11 60.8
MsG0880047206.01.T01 AT5G36180 28.492 179 111 7 37 206 271 441 9.70e-11 60.8

Find 101 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACCTTTATTAATCTTAA+AGG 0.112312 8:-83266865 MsG0880047206.01.T01:five_prime_UTR
TCATAGTAATCTTCAGTTTC+TGG 0.116767 8:+83266465 None:intergenic
CCAGAGAAGGAGAGGTTTAT+TGG 0.191451 8:+83268063 None:intergenic
TCTACCTTGGAAAATGATTC+AGG 0.260931 8:+83266216 None:intergenic
CTTATTCATTCTTTCCTAAC+TGG 0.264101 8:-83264520 MsG0880047206.01.T01:CDS
CCTACAATTTCTTGGTGAAT+TGG 0.271062 8:-83267246 MsG0880047206.01.T01:five_prime_UTR
CGATATTGTGTTGAGGCTTT+AGG 0.279075 8:-83265227 MsG0880047206.01.T01:CDS
GCCTTAAGATATGGATTTAC+AGG 0.283869 8:-83265687 MsG0880047206.01.T01:intron
TATTCAACAATAAATGAAAA+AGG 0.301326 8:-83264360 MsG0880047206.01.T01:three_prime_UTR
TTTGATGAGTTTGGTGTAGA+TGG 0.323218 8:+83265714 None:intergenic
TAACCTGAAAAGTGTGAAAT+TGG 0.324453 8:+83268154 None:intergenic
AAAACCTTTAAGATTAATAA+AGG 0.334038 8:+83266861 None:intergenic
TGTGACTTAATTTAATAGAT+TGG 0.335938 8:+83264429 None:intergenic
AAGGCCACCTTTGATGAGTT+TGG 0.339294 8:+83265705 None:intergenic
TGAGGATGCCTACAATTTCT+TGG 0.340044 8:-83267254 MsG0880047206.01.T01:five_prime_UTR
AAACAAACATGTAGATTTCA+TGG 0.345312 8:+83264297 None:intergenic
GATCTCCAAGTAGACTTTAG+AGG 0.351455 8:+83265200 None:intergenic
CCAATAAACCTCTCCTTCTC+TGG 0.363351 8:-83268063 MsG0880047206.01.T01:five_prime_UTR
AATAGAGGACCTGATTATTA+TGG 0.363598 8:+83265171 None:intergenic
TCAAAGGTGGCCTTAAGATA+TGG 0.384822 8:-83265696 MsG0880047206.01.T01:CDS
AGAAGCAAATTTGTTATTTG+TGG 0.388540 8:-83267451 MsG0880047206.01.T01:five_prime_UTR
GATGATCATGGACGTATAGT+AGG 0.395363 8:+83264487 None:intergenic
GAAGTTGTAAGTCCTCAATA+TGG 0.403385 8:+83265756 None:intergenic
TTAAAACAAAGAAACATATT+AGG 0.406269 8:+83268275 None:intergenic
CCAATTCACCAAGAAATTGT+AGG 0.412556 8:+83267246 None:intergenic
GCAGGTTGGAGGAAGGATAG+TGG 0.413209 8:-83264623 MsG0880047206.01.T01:intron
TAAAGTCTACTTGGAGATCT+TGG 0.417999 8:-83265196 MsG0880047206.01.T01:CDS
ACCTGTAAATCCATATCTTA+AGG 0.420489 8:+83265686 None:intergenic
TCTCCGAATGTGTAGCTTAG+TGG 0.425664 8:-83268920 None:intergenic
CCTCTCCTTCTCTGGCTCAA+TGG 0.426524 8:-83268055 MsG0880047206.01.T01:five_prime_UTR
GATGGCAGACTACCTGTGAT+AGG 0.427462 8:-83265254 MsG0880047206.01.T01:CDS
GACTCCATGCATATTCTAGA+AGG 0.432732 8:+83266433 None:intergenic
AGTGAGATCAGAAGAGGTAT+TGG 0.440147 8:+83267398 None:intergenic
TATCAATTTCTGAGTAATCA+TGG 0.448420 8:+83266307 None:intergenic
CAAAGAAACATATTAGGAAC+TGG 0.455768 8:+83268281 None:intergenic
CTTCAAAGAACCAATAGAAA+AGG 0.464372 8:+83268101 None:intergenic
ATCTTGGTACCATAATAATC+AGG 0.468032 8:-83265180 MsG0880047206.01.T01:intron
GACTACCTCTAAAGTCTACT+TGG 0.468519 8:-83265205 MsG0880047206.01.T01:CDS
GAATTCATTCATGATGATCA+TGG 0.474075 8:+83264475 None:intergenic
ATCACTGTCAATGAAGATCA+TGG 0.479403 8:-83268130 MsG0880047206.01.T01:five_prime_UTR
GTGGAGTCACCCATTGGAGT+TGG 0.482769 8:-83267432 MsG0880047206.01.T01:five_prime_UTR
ATGGTCTAATGAGTGCAATC+AGG 0.483081 8:-83266346 MsG0880047206.01.T01:five_prime_UTR
TAGGGAGATGATCTCCAGTT+AGG 0.484012 8:+83264506 None:intergenic
TATTGATACACCAGCAAATG+AGG 0.487506 8:+83264384 None:intergenic
TTATTTGTGGAGTCACCCAT+TGG 0.489508 8:-83267438 MsG0880047206.01.T01:five_prime_UTR
GGAAGGATAGTGGAGTATGA+AGG 0.491007 8:-83264613 MsG0880047206.01.T01:CDS
GATTTCCACAGTTTAAATCC+AGG 0.503025 8:-83267216 MsG0880047206.01.T01:five_prime_UTR
ATAATGTAACCCTCATTTGC+TGG 0.512291 8:-83264394 MsG0880047206.01.T01:three_prime_UTR
GCCTCAGTTGGTTTGTTGAG+AGG 0.512490 8:+83264550 None:intergenic
CTGCAAGCTGAGGGATATAG+TGG 0.516994 8:+83266923 None:intergenic
TTCAAAGAACCAATAGAAAA+GGG 0.520725 8:+83268102 None:intergenic
CTACCTTGGAAAATGATTCA+GGG 0.521127 8:+83266217 None:intergenic
ATAGCAGGAGAAAGCTATGC+TGG 0.522630 8:-83267184 MsG0880047206.01.T01:intron
AAAGCATCTGAAATAAATGT+TGG 0.522670 8:-83268229 MsG0880047206.01.T01:five_prime_UTR
AGAAGGAGAGGTTTATTGGA+GGG 0.531052 8:+83268067 None:intergenic
ATGAATGGAATGCAGGTTGG+AGG 0.537003 8:-83264634 MsG0880047206.01.T01:intron
AATCTATTAAATTAAGTCAC+AGG 0.540629 8:-83264427 MsG0880047206.01.T01:three_prime_UTR
AAGAAAACAATAACATAGCA+TGG 0.541066 8:-83265891 MsG0880047206.01.T01:CDS
ATTTCCACAGTTTAAATCCA+GGG 0.543200 8:-83267215 MsG0880047206.01.T01:five_prime_UTR
AAACAATAACATAGCATGGA+AGG 0.547773 8:-83265887 MsG0880047206.01.T01:CDS
CTCCTTCTCTGGCTCAATGG+AGG 0.548120 8:-83268052 MsG0880047206.01.T01:five_prime_UTR
ATGGAATGCAGGTTGGAGGA+AGG 0.549335 8:-83264630 MsG0880047206.01.T01:intron
TATGTGACAGTGAGAGGAGC+TGG 0.554988 8:-83264583 MsG0880047206.01.T01:CDS
TGAGTTTGGTGTAGATGGGC+AGG 0.558897 8:+83265719 None:intergenic
ATGATCATGGACGTATAGTA+GGG 0.561185 8:+83264488 None:intergenic
CCAATGAAGTTGAGAGTGGA+TGG 0.567451 8:+83264212 None:intergenic
AAGATTAACTCTGCAAGCTG+AGG 0.573791 8:+83266913 None:intergenic
AAGGCCTTCTAGAATATGCA+TGG 0.576001 8:-83266437 MsG0880047206.01.T01:five_prime_UTR
GGTGGTGTCGAAGGTTGTCC+TGG 0.577699 8:+83268175 None:intergenic
CCTGAAAAGTGTGAAATTGG+TGG 0.577902 8:+83268157 None:intergenic
TTGATGAGTTTGGTGTAGAT+GGG 0.579382 8:+83265715 None:intergenic
GAGAAGGAGAGGTTTATTGG+AGG 0.580591 8:+83268066 None:intergenic
CCATTGAGCCAGAGAAGGAG+AGG 0.585851 8:+83268055 None:intergenic
TTGACATATGTGACAGTGAG+AGG 0.587941 8:-83264589 MsG0880047206.01.T01:CDS
TGTGAAATTGGTGGTGTCGA+AGG 0.589267 8:+83268166 None:intergenic
TAAAATAGTGAGATCAGAAG+AGG 0.589307 8:+83267392 None:intergenic
AGATTAACTCTGCAAGCTGA+GGG 0.592878 8:+83266914 None:intergenic
CAATATCGTGTCCCTATCAC+AGG 0.593552 8:+83265242 None:intergenic
TCACTGTCAATGAAGATCAT+GGG 0.594629 8:-83268129 MsG0880047206.01.T01:five_prime_UTR
CACCTCCATTGAGCCAGAGA+AGG 0.598697 8:+83268050 None:intergenic
TGCTTTAATGAACAATGAAG+TGG 0.601083 8:+83268246 None:intergenic
ATGGCAGACTACCTGTGATA+GGG 0.603092 8:-83265253 MsG0880047206.01.T01:CDS
AGTGAGAGGAGCTGGTCACT+TGG 0.603748 8:-83264575 MsG0880047206.01.T01:CDS
GTACTGTTTGAATGACATGC+TGG 0.606307 8:+83266267 None:intergenic
TTTCCATTGAAAATTAAAAG+CGG 0.607456 8:+83264242 None:intergenic
ATTGATACACCAGCAAATGA+GGG 0.611384 8:+83264385 None:intergenic
AAGTCCCTGGATTTAAACTG+TGG 0.613586 8:+83267211 None:intergenic
ATAAGAGAGAGAGCCTCAGT+TGG 0.632043 8:+83264538 None:intergenic
GAAGATTACTATGACAACAA+AGG 0.634842 8:-83266456 MsG0880047206.01.T01:five_prime_UTR
CTGTCAATGAAGATCATGGG+AGG 0.639911 8:-83268126 MsG0880047206.01.T01:five_prime_UTR
AAAATGATTATAGAATGAAG+AGG 0.640286 8:-83266014 MsG0880047206.01.T01:CDS
ATTAATAGTGGAGATGCAGA+TGG 0.641384 8:-83265272 MsG0880047206.01.T01:intron
GCCTCTCAACAAACCAACTG+AGG 0.642126 8:-83264551 MsG0880047206.01.T01:CDS
ATCTACACCAAACTCATCAA+AGG 0.646779 8:-83265712 MsG0880047206.01.T01:CDS
TCTGCATATGTGGAATAACA+AGG 0.650025 8:+83265967 None:intergenic
TGTCAATGAAGATCATGGGA+GGG 0.660889 8:-83268125 MsG0880047206.01.T01:five_prime_UTR
TACACCAAACTCATCAAAGG+TGG 0.666201 8:-83265709 MsG0880047206.01.T01:CDS
ATTATTTGTTACTGTCACTG+AGG 0.669384 8:+83266242 None:intergenic
AGGGACACGATATTGTGTTG+AGG 0.672514 8:-83265234 MsG0880047206.01.T01:CDS
TATGCCAATGAAGTTGAGAG+TGG 0.714535 8:+83264208 None:intergenic
GATAGAATAAGTGATCTACC+AGG 0.720379 8:-83268193 MsG0880047206.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATAATTAATTTTTTTAA+AGG - Chr8:83268223-83268242 MsG0880047206.01.T01:five_prime_UTR 0.0%
!! AAAAAATAAAAATCATTTAG+GGG + Chr8:83266634-83266653 None:intergenic 10.0%
!! GAAAAAATAAAAATCATTTA+GGG + Chr8:83266635-83266654 None:intergenic 10.0%
!! TGAAAAAATAAAAATCATTT+AGG + Chr8:83266636-83266655 None:intergenic 10.0%
!! TTAATTAAGAATTTATACAA+TGG + Chr8:83267997-83268016 None:intergenic 10.0%
!!! TAAATGATTTTTATTTTTTC+AGG - Chr8:83266635-83266654 MsG0880047206.01.T01:intron 10.0%
!!! TAGTTTGTAATTAAATATTA+CGG + Chr8:83265846-83265865 None:intergenic 10.0%
!!! TTAAATTCTAAAATTAATAG+AGG - Chr8:83267709-83267728 MsG0880047206.01.T01:intron 10.0%
!! AAATAAAGAATGGAAAATTA+AGG - Chr8:83266318-83266337 MsG0880047206.01.T01:CDS 15.0%
!! AATAATTAATTTCAACTAAG+AGG - Chr8:83268250-83268269 MsG0880047206.01.T01:five_prime_UTR 15.0%
!! TAAAAATAAGTATTAAGTCT+CGG + Chr8:83265284-83265303 None:intergenic 15.0%
!! TATACTTCATAGTAAAAATT+GGG + Chr8:83265531-83265550 None:intergenic 15.0%
!! TATTCAACAATAAATGAAAA+AGG - Chr8:83268771-83268790 MsG0880047206.01.T01:intron 15.0%
!! TTAAAACAAAGAAACATATT+AGG + Chr8:83264859-83264878 None:intergenic 15.0%
!! TTATTATTAGTAAATGTTAG+TGG - Chr8:83265151-83265170 MsG0880047206.01.T01:intron 15.0%
!!! AAAACCTTTAAGATTAATAA+AGG + Chr8:83266273-83266292 None:intergenic 15.0%
!!! AACATATAGTTTTTTATGTA+TGG - Chr8:83265305-83265324 MsG0880047206.01.T01:intron 15.0%
!!! ACTAAAACATGATTATTTTT+TGG + Chr8:83264620-83264639 None:intergenic 15.0%
!!! ACTATCTTTTTTTTTTTTTG+AGG - Chr8:83267587-83267606 MsG0880047206.01.T01:intron 15.0%
!!! ATAGAATAAAGTATCAATTA+AGG + Chr8:83267301-83267320 None:intergenic 15.0%
!!! ATGAATTGTTTTTGTAAATA+TGG + Chr8:83264574-83264593 None:intergenic 15.0%
!!! CTATCTTTTTTTTTTTTTGA+GGG - Chr8:83267588-83267607 MsG0880047206.01.T01:intron 15.0%
!!! TAATTTTCCATTCTTTATTT+TGG + Chr8:83266318-83266337 None:intergenic 15.0%
!!! TAGAATAAAGTATCAATTAA+GGG + Chr8:83267300-83267319 None:intergenic 15.0%
!!! TTCTTTTAAGAATAAGATTT+AGG - Chr8:83264465-83264484 MsG0880047206.01.T01:three_prime_UTR 15.0%
!! AAAATGATTATAGAATGAAG+AGG - Chr8:83267117-83267136 MsG0880047206.01.T01:intron 20.0%
!! AAAATGCATTTATGACTTTA+TGG - Chr8:83267676-83267695 MsG0880047206.01.T01:intron 20.0%
!! AAATAGTTGCAATAAAAATG+TGG + Chr8:83266182-83266201 None:intergenic 20.0%
!! AACACCTTTATTAATCTTAA+AGG - Chr8:83266266-83266285 MsG0880047206.01.T01:CDS 20.0%
!! AATCTATTAAATTAAGTCAC+AGG - Chr8:83268704-83268723 MsG0880047206.01.T01:intron 20.0%
!! CTAGCTAAAATGAATAAAAT+TGG + Chr8:83264804-83264823 None:intergenic 20.0%
!! CTATACTTCATAGTAAAAAT+TGG + Chr8:83265532-83265551 None:intergenic 20.0%
!! GTAAAAATACACAATCTATA+TGG + Chr8:83267569-83267588 None:intergenic 20.0%
!! TAAATAAATATGACTAGAGT+TGG + Chr8:83265341-83265360 None:intergenic 20.0%
!! TATATATCTATTCAGTCTTA+AGG + Chr8:83267514-83267533 None:intergenic 20.0%
!! TGTGACTTAATTTAATAGAT+TGG + Chr8:83268705-83268724 None:intergenic 20.0%
!! TTTCCATTGAAAATTAAAAG+CGG + Chr8:83268892-83268911 None:intergenic 20.0%
!!! AAAACATTTTTTGTGATCTT+TGG + Chr8:83264657-83264676 None:intergenic 20.0%
!!! AAACATTTTTTGTGATCTTT+GGG + Chr8:83264656-83264675 None:intergenic 20.0%
!!! ACAATATTTGTTTAAGTTAG+AGG - Chr8:83267071-83267090 MsG0880047206.01.T01:intron 20.0%
!!! AGCTTTCTTAAATAGTTTTT+AGG + Chr8:83266428-83266447 None:intergenic 20.0%
!!! CAATATTTGTTTAAGTTAGA+GGG - Chr8:83267072-83267091 MsG0880047206.01.T01:intron 20.0%
!!! GATTTTTATTTTTTCAGGTA+GGG - Chr8:83266640-83266659 MsG0880047206.01.T01:intron 20.0%
!!! TGATTTTTATTTTTTCAGGT+AGG - Chr8:83266639-83266658 MsG0880047206.01.T01:intron 20.0%
!!! TTGAAAAAGTATTATGAAAG+AGG + Chr8:83265229-83265248 None:intergenic 20.0%
!!! TTTTATTGCAACTATTTTTC+AGG - Chr8:83266185-83266204 MsG0880047206.01.T01:intron 20.0%
!!! TTTTTATAGACAAATGTTAG+TGG + Chr8:83264538-83264557 None:intergenic 20.0%
! AAACAAACATGTAGATTTCA+TGG + Chr8:83268837-83268856 None:intergenic 25.0%
! AAGAAAACAATAACATAGCA+TGG - Chr8:83267240-83267259 MsG0880047206.01.T01:five_prime_UTR 25.0%
! AATACACAATCTATATGGTT+AGG + Chr8:83267564-83267583 None:intergenic 25.0%
! ACTGAAAAATTAGACATAGA+TGG + Chr8:83267351-83267370 None:intergenic 25.0%
! ATAAGGATCCATATTGTTTA+TGG - Chr8:83267637-83267656 MsG0880047206.01.T01:intron 25.0%
! ATAGAATTGTTAGTAGCTTT+CGG - Chr8:83267743-83267762 MsG0880047206.01.T01:intron 25.0%
! ATCTCCAATATTCTCAAAAT+TGG - Chr8:83264284-83264303 MsG0880047206.01.T01:three_prime_UTR 25.0%
! ATGGAAAATTAAGGAGATTA+AGG - Chr8:83266327-83266346 MsG0880047206.01.T01:exon 25.0%
! ATGGCAAAAAAGATAAATAG+AGG + Chr8:83267978-83267997 None:intergenic 25.0%
! CAACTAAGAGGTAAAATTAA+GGG - Chr8:83268262-83268281 MsG0880047206.01.T01:five_prime_UTR 25.0%
! CTATCTCATCTTTATAGATA+AGG - Chr8:83267620-83267639 MsG0880047206.01.T01:intron 25.0%
! GTATGAATTTATTAGCAACA+TGG - Chr8:83265190-83265209 MsG0880047206.01.T01:CDS 25.0%
! GTGTTATAAAAAAGTGATTC+TGG + Chr8:83266589-83266608 None:intergenic 25.0%
! TACTCTAAATTAATGTCGTT+AGG - Chr8:83267484-83267503 MsG0880047206.01.T01:intron 25.0%
! TATCAATTTCTGAGTAATCA+TGG + Chr8:83266827-83266846 None:intergenic 25.0%
! TCAACTAAGAGGTAAAATTA+AGG - Chr8:83268261-83268280 MsG0880047206.01.T01:five_prime_UTR 25.0%
! TCCTTAACCAAAATAAAGAA+TGG - Chr8:83266308-83266327 MsG0880047206.01.T01:CDS 25.0%
! TTCAAAGAACCAATAGAAAA+GGG + Chr8:83265032-83265051 None:intergenic 25.0%
!! AAAGCATCTGAAATAAATGT+TGG - Chr8:83264902-83264921 MsG0880047206.01.T01:intron 25.0%
!! ATTCTTTTTGCAGCATTTAT+TGG + Chr8:83265618-83265637 None:intergenic 25.0%
!! GTGATTTTAAACAATCTCAA+TGG - Chr8:83266766-83266785 MsG0880047206.01.T01:intron 25.0%
!! TAAGACTTAATGGATATGAA+TGG - Chr8:83268482-83268501 MsG0880047206.01.T01:intron 25.0%
!! TTTAAGTTAGAGGGAAAATT+TGG - Chr8:83267081-83267100 MsG0880047206.01.T01:intron 25.0%
!!! AGAAAATTTTGAGTTTACAG+CGG + Chr8:83268456-83268475 None:intergenic 25.0%
!!! AGAAGCAAATTTGTTATTTG+TGG - Chr8:83265680-83265699 MsG0880047206.01.T01:intron 25.0%
!!! ATTTTAGAGGATCATTTTGT+AGG - Chr8:83265756-83265775 MsG0880047206.01.T01:CDS 25.0%
!!! TCCATTCTTTATTTTGGTTA+AGG + Chr8:83266312-83266331 None:intergenic 25.0%
AAACAATAACATAGCATGGA+AGG - Chr8:83267244-83267263 MsG0880047206.01.T01:five_prime_UTR 30.0%
AATAGAGGACCTGATTATTA+TGG + Chr8:83267963-83267982 None:intergenic 30.0%
ACCTGTAAATCCATATCTTA+AGG + Chr8:83267448-83267467 None:intergenic 30.0%
AGTATTATGAAAGAGGTTCA+AGG + Chr8:83265222-83265241 None:intergenic 30.0%
ATAAGTATTAAGTCTCGGAA+AGG + Chr8:83265279-83265298 None:intergenic 30.0%
ATCTTGGTACCATAATAATC+AGG - Chr8:83267951-83267970 MsG0880047206.01.T01:intron 30.0%
ATGTGTTTCTTAATCGAAGT+TGG - Chr8:83264394-83264413 MsG0880047206.01.T01:three_prime_UTR 30.0%
ATTTCCACAGTTTAAATCCA+GGG - Chr8:83265916-83265935 MsG0880047206.01.T01:CDS 30.0%
CAAAGAAACATATTAGGAAC+TGG + Chr8:83264853-83264872 None:intergenic 30.0%
CAATATTCTCAAAATTGGTC+CGG - Chr8:83264289-83264308 MsG0880047206.01.T01:three_prime_UTR 30.0%
CACTATTAATTCATTCCACA+AGG + Chr8:83267849-83267868 None:intergenic 30.0%
CCATAATCAAGCTAGTAAAA+AGG - Chr8:83268360-83268379 MsG0880047206.01.T01:intron 30.0%
CTTATTCATTCTTTCCTAAC+TGG - Chr8:83268611-83268630 MsG0880047206.01.T01:intron 30.0%
CTTCAAAGAACCAATAGAAA+AGG + Chr8:83265033-83265052 None:intergenic 30.0%
CTTGTGGAATGAATTAATAG+TGG - Chr8:83267847-83267866 MsG0880047206.01.T01:intron 30.0%
GAAAAATTCTTCTGCATATG+TGG + Chr8:83267177-83267196 None:intergenic 30.0%
GAAAGAAAAATTGTTAGCTG+TGG + Chr8:83264500-83264519 None:intergenic 30.0%
GAAGATTACTATGACAACAA+AGG - Chr8:83266675-83266694 MsG0880047206.01.T01:intron 30.0%
GAATTCATTCATGATGATCA+TGG + Chr8:83268659-83268678 None:intergenic 30.0%
TAAAATAGTGAGATCAGAAG+AGG + Chr8:83265742-83265761 None:intergenic 30.0%
TAAGAAAAACCAACTCCAAT+GGG + Chr8:83265711-83265730 None:intergenic 30.0%
TATAGTGCTAATATGTGAGT+GGG + Chr8:83264733-83264752 None:intergenic 30.0%
TCATAGTAATCTTCAGTTTC+TGG + Chr8:83266669-83266688 None:intergenic 30.0%
TCATATCCATTAAGTCTTAG+AGG + Chr8:83268481-83268500 None:intergenic 30.0%
TGCTTTAATGAACAATGAAG+TGG + Chr8:83264888-83264907 None:intergenic 30.0%
TGTAATGTTGCCTTTGAATT+AGG - Chr8:83265384-83265403 MsG0880047206.01.T01:intron 30.0%
TTATAGTGCTAATATGTGAG+TGG + Chr8:83264734-83264753 None:intergenic 30.0%
TTTATTGGCACAGCAATAAT+TGG + Chr8:83265603-83265622 None:intergenic 30.0%
! AGTAGTCAATGCTTTTACAT+TGG - Chr8:83264755-83264774 MsG0880047206.01.T01:intron 30.0%
! ATGAAGAGGATGAGAATTTT+TGG - Chr8:83267131-83267150 MsG0880047206.01.T01:intron 30.0%
! ATTATTTGTTACTGTCACTG+AGG + Chr8:83266892-83266911 None:intergenic 30.0%
! TAACCTGAAAAGTGTGAAAT+TGG + Chr8:83264980-83264999 None:intergenic 30.0%
! TGAAGAGGATGAGAATTTTT+GGG - Chr8:83267132-83267151 MsG0880047206.01.T01:intron 30.0%
! TTTTCAGTGATTCCATATTG+AGG - Chr8:83267363-83267382 MsG0880047206.01.T01:intron 30.0%
!! ATCGAAGTTGGTAAATTTGA+AGG - Chr8:83264406-83264425 MsG0880047206.01.T01:three_prime_UTR 30.0%
!! ATGCAGAAGAATTTTTCAAC+AGG - Chr8:83267180-83267199 MsG0880047206.01.T01:intron 30.0%
!! ATGTTAGTGGTTAATTTGCT+AGG - Chr8:83265164-83265183 MsG0880047206.01.T01:intron 30.0%
!! CAAAATAGCTTCTGCTATTT+TGG - Chr8:83266526-83266545 MsG0880047206.01.T01:intron 30.0%
!! CCTTTTTACTAGCTTGATTA+TGG + Chr8:83268363-83268382 None:intergenic 30.0%
!! GATTTTAAGAAACATCAAGG+AGG - Chr8:83264432-83264451 MsG0880047206.01.T01:three_prime_UTR 30.0%
!! GGTGATTTTAAGAAACATCA+AGG - Chr8:83264429-83264448 MsG0880047206.01.T01:three_prime_UTR 30.0%
!! TCGAAGTTGGTAAATTTGAA+GGG - Chr8:83264407-83264426 MsG0880047206.01.T01:three_prime_UTR 30.0%
!! TGCAGAAGAATTTTTCAACA+GGG - Chr8:83267181-83267200 MsG0880047206.01.T01:intron 30.0%
!! TGTTAGTGGTTAATTTGCTA+GGG - Chr8:83265165-83265184 MsG0880047206.01.T01:intron 30.0%
!! TTCTGATCTCACTATTTTAG+AGG - Chr8:83265743-83265762 MsG0880047206.01.T01:CDS 30.0%
!!! AATGCTTTTACATTGGCTTT+GGG - Chr8:83264762-83264781 MsG0880047206.01.T01:intron 30.0%
!!! ACACCGCTTTTAATTTTCAA+TGG - Chr8:83268886-83268905 MsG0880047206.01.T01:intron 30.0%
!!! GTTTTTTTTCTGTGTCTAGA+TGG + Chr8:83264373-83264392 None:intergenic 30.0%
AAACCTTGATTCCAAGAGTA+TGG + Chr8:83265498-83265517 None:intergenic 35.0%
AACTTCTCAATCTATGCCAA+TGG - Chr8:83265247-83265266 MsG0880047206.01.T01:CDS 35.0%
AATGGATATGAATGGAATGC+AGG - Chr8:83268490-83268509 MsG0880047206.01.T01:intron 35.0%
AGGGAAAATTTGGTTATTGC+AGG - Chr8:83267091-83267110 MsG0880047206.01.T01:intron 35.0%
ATAATGTAACCCTCATTTGC+TGG - Chr8:83268737-83268756 MsG0880047206.01.T01:intron 35.0%
ATCACTGTCAATGAAGATCA+TGG - Chr8:83265001-83265020 MsG0880047206.01.T01:intron 35.0%
ATCTACACCAAACTCATCAA+AGG - Chr8:83267419-83267438 MsG0880047206.01.T01:five_prime_UTR 35.0%
ATGATCATGGACGTATAGTA+GGG + Chr8:83268646-83268665 None:intergenic 35.0%
ATGTCTGAAAATGACAAGTG+AGG + Chr8:83264690-83264709 None:intergenic 35.0%
ATTGATACACCAGCAAATGA+GGG + Chr8:83268749-83268768 None:intergenic 35.0%
CACTTGGTCCATAAACAATA+TGG + Chr8:83267648-83267667 None:intergenic 35.0%
CCAATTCACCAAGAAATTGT+AGG + Chr8:83265888-83265907 None:intergenic 35.0%
CCTACAATTTCTTGGTGAAT+TGG - Chr8:83265885-83265904 MsG0880047206.01.T01:CDS 35.0%
CTACCTTGGAAAATGATTCA+GGG + Chr8:83266917-83266936 None:intergenic 35.0%
GAAGTTGTAAGTCCTCAATA+TGG + Chr8:83267378-83267397 None:intergenic 35.0%
GAGAATGAGGAAAATTACAG+TGG - Chr8:83268105-83268124 MsG0880047206.01.T01:five_prime_UTR 35.0%
GAGTTACTTGATTGAGTTTG+TGG - Chr8:83268137-83268156 MsG0880047206.01.T01:five_prime_UTR 35.0%
GATAGAATAAGTGATCTACC+AGG - Chr8:83264938-83264957 MsG0880047206.01.T01:intron 35.0%
GATTTCCACAGTTTAAATCC+AGG - Chr8:83265915-83265934 MsG0880047206.01.T01:CDS 35.0%
GCCTTAAGATATGGATTTAC+AGG - Chr8:83267444-83267463 MsG0880047206.01.T01:five_prime_UTR 35.0%
GTAAGAAAAACCAACTCCAA+TGG + Chr8:83265712-83265731 None:intergenic 35.0%
GTATGTTTGTTTGTACCTTG+TGG - Chr8:83267831-83267850 MsG0880047206.01.T01:intron 35.0%
GTGACATTAGTTATCTACCT+TGG + Chr8:83266931-83266950 None:intergenic 35.0%
TAAAGTCTACTTGGAGATCT+TGG - Chr8:83267935-83267954 MsG0880047206.01.T01:intron 35.0%
TAACATTCAACCCATACTCT+TGG - Chr8:83265484-83265503 MsG0880047206.01.T01:intron 35.0%
TAGATACACATTGCACATAC+AGG + Chr8:83266048-83266067 None:intergenic 35.0%
TATTGATACACCAGCAAATG+AGG + Chr8:83268750-83268769 None:intergenic 35.0%
TCACTGTCAATGAAGATCAT+GGG - Chr8:83265002-83265021 MsG0880047206.01.T01:intron 35.0%
TCTACCTTGGAAAATGATTC+AGG + Chr8:83266918-83266937 None:intergenic 35.0%
TCTGCATATGTGGAATAACA+AGG + Chr8:83267167-83267186 None:intergenic 35.0%
TTAGTCAACCAAAATGGTGA+AGG - Chr8:83265459-83265478 MsG0880047206.01.T01:intron 35.0%
! AACCTTGATTCCAAGAGTAT+GGG + Chr8:83265497-83265516 None:intergenic 35.0%
! ATGTTAGTCCTTCACCATTT+TGG + Chr8:83265470-83265489 None:intergenic 35.0%
! ATTAATAGTGGAGATGCAGA+TGG - Chr8:83267859-83267878 MsG0880047206.01.T01:intron 35.0%
! CATTTAGGGGTGCATATTTA+GGG + Chr8:83266621-83266640 None:intergenic 35.0%
! CCTCTTTTAGTCAACCAAAA+TGG - Chr8:83265453-83265472 MsG0880047206.01.T01:intron 35.0%
! GAAGAGGATGAGAATTTTTG+GGG - Chr8:83267133-83267152 MsG0880047206.01.T01:intron 35.0%
! GTTTTGCTTTGTCATATTGC+TGG + Chr8:83266740-83266759 None:intergenic 35.0%
! TCATTTAGGGGTGCATATTT+AGG + Chr8:83266622-83266641 None:intergenic 35.0%
! TGCATTTTTCACTTTGCACT+TGG + Chr8:83267664-83267683 None:intergenic 35.0%
!! AAGAGGATGAGAATTTTTGG+GGG - Chr8:83267134-83267153 MsG0880047206.01.T01:intron 35.0%
!! CGAAGTTGGTAAATTTGAAG+GGG - Chr8:83264408-83264427 MsG0880047206.01.T01:three_prime_UTR 35.0%
!! CGGACCAATTTTGAGAATAT+TGG + Chr8:83264291-83264310 None:intergenic 35.0%
!! GTTAGTGGTTAATTTGCTAG+GGG - Chr8:83265166-83265185 MsG0880047206.01.T01:intron 35.0%
!! TTCTCTCCTCTAAGACTTAA+TGG - Chr8:83268472-83268491 MsG0880047206.01.T01:intron 35.0%
!! TTGATGAGTTTGGTGTAGAT+GGG + Chr8:83267419-83267438 None:intergenic 35.0%
!! TTTGATGAGTTTGGTGTAGA+TGG + Chr8:83267420-83267439 None:intergenic 35.0%
!!! CAATGCTTTTACATTGGCTT+TGG - Chr8:83264761-83264780 MsG0880047206.01.T01:intron 35.0%
!!! CCATTTTGGTTGACTAAAAG+AGG + Chr8:83265456-83265475 None:intergenic 35.0%
!!! CGCATTTTGATTAGAGAATG+AGG - Chr8:83268092-83268111 MsG0880047206.01.T01:five_prime_UTR 35.0%
AACAGCACCATATCCAATTG+AGG + Chr8:83265421-83265440 None:intergenic 40.0%
AACCCATACTCTTGGAATCA+AGG - Chr8:83265492-83265511 MsG0880047206.01.T01:intron 40.0%
AAGATTAACTCTGCAAGCTG+AGG + Chr8:83266221-83266240 None:intergenic 40.0%
AAGTCCCTGGATTTAAACTG+TGG + Chr8:83265923-83265942 None:intergenic 40.0%
AGAAGGAGAGGTTTATTGGA+GGG + Chr8:83265067-83265086 None:intergenic 40.0%
AGATTAACTCTGCAAGCTGA+GGG + Chr8:83266220-83266239 None:intergenic 40.0%
ATGGTCTAATGAGTGCAATC+AGG - Chr8:83266785-83266804 MsG0880047206.01.T01:intron 40.0%
CAAACTACTTGAATCAGCTG+AGG - Chr8:83265859-83265878 MsG0880047206.01.T01:intron 40.0%
CACGCCTCAATATGAAGTAT+CGG + Chr8:83266024-83266043 None:intergenic 40.0%
CGATATTGTGTTGAGGCTTT+AGG - Chr8:83267904-83267923 MsG0880047206.01.T01:intron 40.0%
GACTCCATGCATATTCTAGA+AGG + Chr8:83266701-83266720 None:intergenic 40.0%
GATATGAATGGAATGCAGGT+TGG - Chr8:83268494-83268513 MsG0880047206.01.T01:intron 40.0%
GATCTCCAAGTAGACTTTAG+AGG + Chr8:83267934-83267953 None:intergenic 40.0%
GATGATCATGGACGTATAGT+AGG + Chr8:83268647-83268666 None:intergenic 40.0%
GTACTGTTTGAATGACATGC+TGG + Chr8:83266867-83266886 None:intergenic 40.0%
GTTAGTAGCTTTCGGTGAAA+GGG - Chr8:83267751-83267770 MsG0880047206.01.T01:intron 40.0%
TACACCAAACTCATCAAAGG+TGG - Chr8:83267422-83267441 MsG0880047206.01.T01:five_prime_UTR 40.0%
TGAGGATGCCTACAATTTCT+TGG - Chr8:83265877-83265896 MsG0880047206.01.T01:intron 40.0%
TGTCAATGAAGATCATGGGA+GGG - Chr8:83265006-83265025 MsG0880047206.01.T01:intron 40.0%
TGTTAGTAGCTTTCGGTGAA+AGG - Chr8:83267750-83267769 MsG0880047206.01.T01:intron 40.0%
TTATTTGTGGAGTCACCCAT+TGG - Chr8:83265693-83265712 MsG0880047206.01.T01:CDS 40.0%
TTGACATATGTGACAGTGAG+AGG - Chr8:83268542-83268561 MsG0880047206.01.T01:intron 40.0%
! AGTGAGATCAGAAGAGGTAT+TGG + Chr8:83265736-83265755 None:intergenic 40.0%
! CCACCAATTTCACACTTTTC+AGG - Chr8:83264974-83264993 MsG0880047206.01.T01:intron 40.0%
! CCTGAAAAGTGTGAAATTGG+TGG + Chr8:83264977-83264996 None:intergenic 40.0%
! GGTATGAGTTGAGATGTTGA+AGG - Chr8:83264232-83264251 MsG0880047206.01.T01:three_prime_UTR 40.0%
! GTGAAGCACTAAGACATACA+CGG + Chr8:83266126-83266145 None:intergenic 40.0%
! TCAAAGGTGGCCTTAAGATA+TGG - Chr8:83267435-83267454 MsG0880047206.01.T01:five_prime_UTR 40.0%
! TGTCCCTGAATCATTTTCCA+AGG - Chr8:83266911-83266930 MsG0880047206.01.T01:five_prime_UTR 40.0%
!! AAGGCCTTCTAGAATATGCA+TGG - Chr8:83266694-83266713 MsG0880047206.01.T01:intron 40.0%
!! AGCACCGATACTTCATATTG+AGG - Chr8:83266017-83266036 MsG0880047206.01.T01:CDS 40.0%
!! GACTACCTCTAAAGTCTACT+TGG - Chr8:83267926-83267945 MsG0880047206.01.T01:intron 40.0%
!! TATGGTGCTGTTGTTGAGAT+AGG - Chr8:83265429-83265448 MsG0880047206.01.T01:intron 40.0%
!!! AATGTTTTTTCTCGCCTGCA+TGG + Chr8:83264326-83264345 None:intergenic 40.0%
!!! ATGTTTTTTCTCGCCTGCAT+GGG + Chr8:83264325-83264344 None:intergenic 40.0%
AAGGCCACCTTTGATGAGTT+TGG + Chr8:83267429-83267448 None:intergenic 45.0%
AGGGACACGATATTGTGTTG+AGG - Chr8:83267897-83267916 MsG0880047206.01.T01:intron 45.0%
ATAAGAGAGAGAGCCTCAGT+TGG + Chr8:83268596-83268615 None:intergenic 45.0%
ATAGCAGGAGAAAGCTATGC+TGG - Chr8:83265947-83265966 MsG0880047206.01.T01:CDS 45.0%
ATGGCAGACTACCTGTGATA+GGG - Chr8:83267878-83267897 MsG0880047206.01.T01:intron 45.0%
CAATATCGTGTCCCTATCAC+AGG + Chr8:83267892-83267911 None:intergenic 45.0%
CCAATAAACCTCTCCTTCTC+TGG - Chr8:83265068-83265087 MsG0880047206.01.T01:intron 45.0%
CCAGAGAAGGAGAGGTTTAT+TGG + Chr8:83265071-83265090 None:intergenic 45.0%
CTGTCAATGAAGATCATGGG+AGG - Chr8:83265005-83265024 MsG0880047206.01.T01:intron 45.0%
GAGAAGGAGAGGTTTATTGG+AGG + Chr8:83265068-83265087 None:intergenic 45.0%
GCATCCAGGTCCTAATTCAA+AGG + Chr8:83265397-83265416 None:intergenic 45.0%
GGATGCTCCTCAATTGGATA+TGG - Chr8:83265411-83265430 MsG0880047206.01.T01:intron 45.0%
GTTGCCTTTGAATTAGGACC+TGG - Chr8:83265390-83265409 MsG0880047206.01.T01:intron 45.0%
TAGGGAGATGATCTCCAGTT+AGG + Chr8:83268628-83268647 None:intergenic 45.0%
TCCTGCTATGAAAAAGTCCC+TGG + Chr8:83265936-83265955 None:intergenic 45.0%
! ATGAATGGAATGCAGGTTGG+AGG - Chr8:83268497-83268516 MsG0880047206.01.T01:intron 45.0%
! CTCGGAAAGGTATAGTCCAT+TGG + Chr8:83265266-83265285 None:intergenic 45.0%
!! GGAAGGATAGTGGAGTATGA+AGG - Chr8:83268518-83268537 MsG0880047206.01.T01:intron 45.0%
!! TATCCAATTGAGGAGCATCC+AGG + Chr8:83265411-83265430 None:intergenic 45.0%
!! TGTGAAATTGGTGGTGTCGA+AGG + Chr8:83264968-83264987 None:intergenic 45.0%
!!! TCCAGGGACTTTTTCATAGC+AGG - Chr8:83265932-83265951 MsG0880047206.01.T01:CDS 45.0%
CTGCAAGCTGAGGGATATAG+TGG + Chr8:83266211-83266230 None:intergenic 50.0%
GATGGCAGACTACCTGTGAT+AGG - Chr8:83267877-83267896 MsG0880047206.01.T01:intron 50.0%
GCCTCTCAACAAACCAACTG+AGG - Chr8:83268580-83268599 MsG0880047206.01.T01:intron 50.0%
GTGAGTGGGTGATAGCACTT+GGG + Chr8:83264719-83264738 None:intergenic 50.0%
TATGTGACAGTGAGAGGAGC+TGG - Chr8:83268548-83268567 MsG0880047206.01.T01:intron 50.0%
TGTGAGTGGGTGATAGCACT+TGG + Chr8:83264720-83264739 None:intergenic 50.0%
! ATGGAATGCAGGTTGGAGGA+AGG - Chr8:83268501-83268520 MsG0880047206.01.T01:intron 50.0%
! ATGGGAGGGCCCTTTTCTAT+TGG - Chr8:83265020-83265039 MsG0880047206.01.T01:intron 50.0%
!! GCCTCAGTTGGTTTGTTGAG+AGG + Chr8:83268584-83268603 None:intergenic 50.0%
!! TGAGTTTGGTGTAGATGGGC+AGG + Chr8:83267415-83267434 None:intergenic 50.0%
AGTGAGAGGAGCTGGTCACT+TGG - Chr8:83268556-83268575 MsG0880047206.01.T01:intron 55.0%
CACCTCCATTGAGCCAGAGA+AGG + Chr8:83265084-83265103 None:intergenic 55.0%
CCATTGAGCCAGAGAAGGAG+AGG + Chr8:83265079-83265098 None:intergenic 55.0%
CTCGCCTGCATGGGCAAATT+CGG + Chr8:83264316-83264335 None:intergenic 55.0%
CTGCATGGGCAAATTCGGAC+CGG + Chr8:83264311-83264330 None:intergenic 55.0%
GGACCTGGATGCTCCTCAAT+TGG - Chr8:83265405-83265424 MsG0880047206.01.T01:intron 55.0%
GTGGAGTCACCCATTGGAGT+TGG - Chr8:83265699-83265718 MsG0880047206.01.T01:CDS 55.0%
! CCTCTCCTTCTCTGGCTCAA+TGG - Chr8:83265076-83265095 MsG0880047206.01.T01:intron 55.0%
! CTCCTTCTCTGGCTCAATGG+AGG - Chr8:83265079-83265098 MsG0880047206.01.T01:intron 55.0%
! GCAGGTTGGAGGAAGGATAG+TGG - Chr8:83268508-83268527 MsG0880047206.01.T01:intron 55.0%
CGGTCCGAATTTGCCCATGC+AGG - Chr8:83264309-83264328 MsG0880047206.01.T01:three_prime_UTR 60.0%
! GGTGGTGTCGAAGGTTGTCC+TGG + Chr8:83264959-83264978 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83264218 83268935 83264218 ID=MsG0880047206.01;Name=MsG0880047206.01
Chr8 mRNA 83264218 83268935 83264218 ID=MsG0880047206.01.T01;Parent=MsG0880047206.01;Name=MsG0880047206.01.T01;_AED=0.31;_eAED=0.32;_QI=747|0.77|0.8|0.9|0.77|0.8|10|274|211
Chr8 exon 83264218 83264641 83264218 ID=MsG0880047206.01.T01:exon:20662;Parent=MsG0880047206.01.T01
Chr8 exon 83265181 83265286 83265181 ID=MsG0880047206.01.T01:exon:20661;Parent=MsG0880047206.01.T01
Chr8 exon 83265688 83265783 83265688 ID=MsG0880047206.01.T01:exon:20660;Parent=MsG0880047206.01.T01
Chr8 exon 83265880 83266040 83265880 ID=MsG0880047206.01.T01:exon:20659;Parent=MsG0880047206.01.T01
Chr8 exon 83266221 83266496 83266221 ID=MsG0880047206.01.T01:exon:20658;Parent=MsG0880047206.01.T01
Chr8 exon 83266858 83266946 83266858 ID=MsG0880047206.01.T01:exon:20657;Parent=MsG0880047206.01.T01
Chr8 exon 83267185 83267277 83267185 ID=MsG0880047206.01.T01:exon:20656;Parent=MsG0880047206.01.T01
Chr8 exon 83267376 83267471 83267376 ID=MsG0880047206.01.T01:exon:20655;Parent=MsG0880047206.01.T01
Chr8 exon 83268029 83268329 83268029 ID=MsG0880047206.01.T01:exon:20654;Parent=MsG0880047206.01.T01
Chr8 exon 83268921 83268935 83268921 ID=MsG0880047206.01.T01:exon:20653;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83268921 83268935 83268921 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83268029 83268329 83268029 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83267376 83267471 83267376 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83267185 83267277 83267185 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83266858 83266946 83266858 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 five_prime_UTR 83266344 83266496 83266344 ID=MsG0880047206.01.T01:five_prime_utr;Parent=MsG0880047206.01.T01
Chr8 CDS 83266221 83266343 83266221 ID=MsG0880047206.01.T01:cds;Parent=MsG0880047206.01.T01
Chr8 CDS 83265880 83266040 83265880 ID=MsG0880047206.01.T01:cds;Parent=MsG0880047206.01.T01
Chr8 CDS 83265688 83265783 83265688 ID=MsG0880047206.01.T01:cds;Parent=MsG0880047206.01.T01
Chr8 CDS 83265181 83265286 83265181 ID=MsG0880047206.01.T01:cds;Parent=MsG0880047206.01.T01
Chr8 CDS 83264492 83264641 83264492 ID=MsG0880047206.01.T01:cds;Parent=MsG0880047206.01.T01
Chr8 three_prime_UTR 83264218 83264491 83264218 ID=MsG0880047206.01.T01:three_prime_utr;Parent=MsG0880047206.01.T01
Gene Sequence

>MsG0880047206.01.T01

ATGAGTGAAGTTTTCCATGATTACTCAGAAATTGATATATACAACATTTATGCACCAGCATGTCATTCAAACAGTACATCCTCAGTGACAGTAACAAATAATGTCCCTGAATCATTTTCCAAGGTGAAAAATGATTATAGAATGAAGAGGATGAGAATTTTTGGGGGCTATGATCCTTGTTATTCCACATATGCAGAAGAATTTTTCAACAGGGTAGATGTTCAATCATCTTTTCATGCAAATACTATAAAAGAAAACAATAACATAGCATGGAAGGTTTGCAATGATTCCATATTGAGGACTTACAACTTCTCTGTTTTTTCTGTCCTGCCCATCTACACCAAACTCATCAAAGGTGGCCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGACTACCTGTGATAGGGACACGATATTGTGTTGAGGCTTTAGGACTACCTCTAAAGTCTACTTGGAGATCTTGGTACCATAATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCTCTCAACAAACCAACTGAGGCTCTCTCTCTTATTCATTCTTTCCTAACTGGAGATCATCTCCCTACTATACGTCCATGA

Protein sequence

>MsG0880047206.01.T01

MSEVFHDYSEIDIYNIYAPACHSNSTSSVTVTNNVPESFSKVKNDYRMKRMRIFGGYDPCYSTYAEEFFNRVDVQSSFHANTIKENNNIAWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSTWRSWYHNNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTEALSLIHSFLTGDHLPTIRP*