Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046296.01.T01 | KEH31790.1 | 92.857 | 196 | 14 | 0 | 266 | 461 | 381 | 576 | 1.60E-124 | 384 |
| MsG0880046296.01.T01 | KEH31790.1 | 71.774 | 124 | 35 | 0 | 175 | 298 | 189 | 312 | 5.00E-45 | 176 |
| MsG0880046296.01.T01 | KEH31790.1 | 89.216 | 102 | 10 | 1 | 95 | 196 | 1 | 101 | 2.63E-32 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046296.01.T01 | Q8VY13 | 53.723 | 188 | 85 | 2 | 9 | 196 | 53 | 238 | 6.24E-57 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046296.01.T01 | A0A072UPM9 | 92.857 | 196 | 14 | 0 | 266 | 461 | 519 | 714 | 1.98e-123 | 385 |
| MsG0880046296.01.T01 | A0A072V0Z7 | 92.857 | 196 | 14 | 0 | 266 | 461 | 381 | 576 | 7.64e-125 | 384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000097.01 | MsG0880046296.01 | -0.835322 | 1.794975e-56 | 2.187635e-53 |
| MsG0180000221.01 | MsG0880046296.01 | 0.802620 | 5.146629e-49 | 2.532752e-46 |
| MsG0180000241.01 | MsG0880046296.01 | 0.800210 | 1.603865e-48 | 7.424872e-46 |
| MsG0180000646.01 | MsG0880046296.01 | 0.803115 | 4.066907e-49 | 2.026750e-46 |
| MsG0180000647.01 | MsG0880046296.01 | 0.811838 | 5.730355e-51 | 3.584698e-48 |
| MsG0180001119.01 | MsG0880046296.01 | 0.835728 | 1.417217e-56 | 1.748213e-53 |
| MsG0180001591.01 | MsG0880046296.01 | 0.805486 | 1.304236e-49 | 6.908691e-47 |
| MsG0180002085.01 | MsG0880046296.01 | 0.846180 | 2.553264e-59 | 4.357892e-56 |
| MsG0180002088.01 | MsG0880046296.01 | 0.832306 | 1.019027e-55 | 1.134373e-52 |
| MsG0880044629.01 | MsG0880046296.01 | 0.800604 | 1.333336e-48 | 6.234514e-46 |
| MsG0880045624.01 | MsG0880046296.01 | 0.831869 | 1.306734e-55 | 1.436452e-52 |
| MsG0880045771.01 | MsG0880046296.01 | 0.823928 | 1.063314e-53 | 9.283459e-51 |
| MsG0880046268.01 | MsG0880046296.01 | 0.831568 | 1.550350e-55 | 1.689069e-52 |
| MsG0880046296.01 | MsG0880047206.01 | 0.835783 | 1.372027e-56 | 1.695244e-53 |
| MsG0880046296.01 | MsG0880047306.01 | 0.814787 | 1.289623e-51 | 8.734970e-49 |
| MsG0880046296.01 | MsG0880047432.01 | 0.826754 | 2.280019e-54 | 2.157651e-51 |
| MsG0880046296.01 | MsG0880047758.01 | 0.800294 | 1.541676e-48 | 7.152632e-46 |
| MsG0180004106.01 | MsG0880046296.01 | 0.821791 | 3.346588e-53 | 2.749894e-50 |
| MsG0180004112.01 | MsG0880046296.01 | 0.850154 | 2.040353e-60 | 3.959738e-57 |
| MsG0180004277.01 | MsG0880046296.01 | 0.805393 | 1.363892e-49 | 7.207338e-47 |
| MsG0180004368.01 | MsG0880046296.01 | 0.803198 | 3.908972e-49 | 1.952275e-46 |
| MsG0180005292.01 | MsG0880046296.01 | 0.802930 | 4.441648e-49 | 2.203121e-46 |
| MsG0180005639.01 | MsG0880046296.01 | 0.827969 | 1.166265e-54 | 1.143528e-51 |
| MsG0180006054.01 | MsG0880046296.01 | 0.826363 | 2.826191e-54 | 2.644850e-51 |
| MsG0780040285.01 | MsG0880046296.01 | 0.818534 | 1.863962e-52 | 1.398985e-49 |
| MsG0780040681.01 | MsG0880046296.01 | 0.829372 | 5.339812e-55 | 5.455297e-52 |
| MsG0780041191.01 | MsG0880046296.01 | 0.838731 | 2.416139e-57 | 3.265243e-54 |
| MsG0780041301.01 | MsG0880046296.01 | 0.823613 | 1.260201e-53 | 1.090497e-50 |
| MsG0780041468.01 | MsG0880046296.01 | 0.814262 | 1.685328e-51 | 1.125450e-48 |
| MsG0880041864.01 | MsG0880046296.01 | 0.812595 | 3.916820e-51 | 2.500713e-48 |
| MsG0280010645.01 | MsG0880046296.01 | 0.840345 | 9.197586e-58 | 1.306269e-54 |
| MsG0280011029.01 | MsG0880046296.01 | 0.850814 | 1.331445e-60 | 2.640601e-57 |
| MsG0280011309.01 | MsG0880046296.01 | 0.839752 | 1.313209e-57 | 1.830948e-54 |
| MsG0280011404.01 | MsG0880046296.01 | 0.812500 | 4.109980e-51 | 2.617515e-48 |
| MsG0380012085.01 | MsG0880046296.01 | 0.804687 | 1.916879e-49 | 9.947230e-47 |
| MsG0380012091.01 | MsG0880046296.01 | 0.809481 | 1.852273e-50 | 1.088761e-47 |
| MsG0380012319.01 | MsG0880046296.01 | 0.817306 | 3.530313e-52 | 2.561632e-49 |
| MsG0380012321.01 | MsG0880046296.01 | 0.804237 | 2.379005e-49 | 1.220240e-46 |
| MsG0380012340.01 | MsG0880046296.01 | 0.811959 | 5.392976e-51 | 3.384703e-48 |
| MsG0380012343.01 | MsG0880046296.01 | 0.818716 | 1.695622e-52 | 1.278977e-49 |
| MsG0380012353.01 | MsG0880046296.01 | 0.843503 | 1.345892e-58 | 2.110133e-55 |
| MsG0380012356.01 | MsG0880046296.01 | 0.836266 | 1.035176e-56 | 1.297993e-53 |
| MsG0380012357.01 | MsG0880046296.01 | 0.872755 | 2.492466e-67 | 1.055224e-63 |
| MsG0380012960.01 | MsG0880046296.01 | 0.819845 | 9.379191e-53 | 7.299962e-50 |
| MsG0380013342.01 | MsG0880046296.01 | 0.800109 | 1.681672e-48 | 7.765029e-46 |
| MsG0380014794.01 | MsG0880046296.01 | 0.838905 | 2.177541e-57 | 2.958296e-54 |
| MsG0680031996.01 | MsG0880046296.01 | 0.843870 | 1.073928e-58 | 1.703293e-55 |
| MsG0680031998.01 | MsG0880046296.01 | 0.831914 | 1.274201e-55 | 1.402529e-52 |
| MsG0680032002.01 | MsG0880046296.01 | 0.808167 | 3.537718e-50 | 2.008491e-47 |
| MsG0680032221.01 | MsG0880046296.01 | 0.806721 | 7.168661e-50 | 3.919284e-47 |
| MsG0680032257.01 | MsG0880046296.01 | 0.815911 | 7.254095e-52 | 5.066244e-49 |
| MsG0680032274.01 | MsG0880046296.01 | 0.808849 | 2.530278e-50 | 1.462375e-47 |
| MsG0680032279.01 | MsG0880046296.01 | 0.850970 | 1.203103e-60 | 2.398246e-57 |
| MsG0680032305.01 | MsG0880046296.01 | 0.842946 | 1.895649e-58 | 2.919851e-55 |
| MsG0680034032.01 | MsG0880046296.01 | 0.863576 | 2.256233e-64 | 6.872270e-61 |
| MsG0680034421.01 | MsG0880046296.01 | 0.810536 | 1.098067e-50 | 6.636044e-48 |
| MsG0680034480.01 | MsG0880046296.01 | 0.803663 | 3.130265e-49 | 1.582124e-46 |
| MsG0680034721.01 | MsG0880046296.01 | 0.817200 | 3.730322e-52 | 2.698974e-49 |
| MsG0480019065.01 | MsG0880046296.01 | 0.822529 | 2.256703e-53 | 1.893832e-50 |
| MsG0480019083.01 | MsG0880046296.01 | 0.800725 | 1.259366e-48 | 5.906780e-46 |
| MsG0480020322.01 | MsG0880046296.01 | 0.816171 | 6.345370e-52 | 4.463579e-49 |
| MsG0480020323.01 | MsG0880046296.01 | 0.818715 | 1.695911e-52 | 1.279180e-49 |
| MsG0480020433.01 | MsG0880046296.01 | 0.889796 | 1.756257e-73 | 1.437977e-69 |
| MsG0480022535.01 | MsG0880046296.01 | 0.801543 | 8.570249e-49 | 4.103640e-46 |
| MsG0480022802.01 | MsG0880046296.01 | 0.826368 | 2.818392e-54 | 2.638002e-51 |
| MsG0480023251.01 | MsG0880046296.01 | 0.828000 | 1.146618e-54 | 1.125264e-51 |
| MsG0480023998.01 | MsG0880046296.01 | 0.818906 | 1.535245e-52 | 1.164225e-49 |
| MsG0580024975.01 | MsG0880046296.01 | 0.851412 | 9.026489e-61 | 1.825631e-57 |
| MsG0580025226.01 | MsG0880046296.01 | 0.838441 | 2.870694e-57 | 3.845471e-54 |
| MsG0380015049.01 | MsG0880046296.01 | 0.830921 | 2.236663e-55 | 2.390347e-52 |
| MsG0380015114.01 | MsG0880046296.01 | 0.840361 | 9.108383e-58 | 1.294306e-54 |
| MsG0380015134.01 | MsG0880046296.01 | 0.811474 | 6.876248e-51 | 4.260593e-48 |
| MsG0380015486.01 | MsG0880046296.01 | 0.811638 | 6.335196e-51 | 3.941932e-48 |
| MsG0380015640.01 | MsG0880046296.01 | 0.888833 | 4.155394e-73 | 3.270528e-69 |
| MsG0380015943.01 | MsG0880046296.01 | 0.819728 | 9.970603e-53 | 7.735214e-50 |
| MsG0380016201.01 | MsG0880046296.01 | -0.840271 | 9.611946e-58 | 1.362042e-54 |
| MsG0380016460.01 | MsG0880046296.01 | -0.813309 | 2.732326e-51 | 1.778060e-48 |
| MsG0380017035.01 | MsG0880046296.01 | 0.800217 | 1.598665e-48 | 7.402149e-46 |
| MsG0380017366.01 | MsG0880046296.01 | 0.801043 | 1.084494e-48 | 5.128154e-46 |
| MsG0380017710.01 | MsG0880046296.01 | 0.804655 | 1.946111e-49 | 1.009058e-46 |
| MsG0480018226.01 | MsG0880046296.01 | 0.814839 | 1.256075e-51 | 8.519584e-49 |
| MsG0480018253.01 | MsG0880046296.01 | 0.805070 | 1.594302e-49 | 8.355487e-47 |
| MsG0580028406.01 | MsG0880046296.01 | 0.802115 | 6.539792e-49 | 3.177147e-46 |
| MsG0580028445.01 | MsG0880046296.01 | 0.803166 | 3.969357e-49 | 1.980810e-46 |
| MsG0580029880.01 | MsG0880046296.01 | 0.804592 | 2.005904e-49 | 1.038366e-46 |
| MsG0280007698.01 | MsG0880046296.01 | 0.817530 | 3.143157e-52 | 2.294785e-49 |
| MsG0280007877.01 | MsG0880046296.01 | 0.814749 | 1.314729e-51 | 8.895935e-49 |
| MsG0280008165.01 | MsG0880046296.01 | 0.835826 | 1.338556e-56 | 1.655977e-53 |
| MsG0280008171.01 | MsG0880046296.01 | 0.845109 | 4.985980e-59 | 8.221333e-56 |
| MsG0280008369.01 | MsG0880046296.01 | 0.802798 | 4.729068e-49 | 2.337936e-46 |
| MsG0280009816.01 | MsG0880046296.01 | 0.807420 | 5.098615e-50 | 2.838591e-47 |
| MsG0680035707.01 | MsG0880046296.01 | 0.832009 | 1.206859e-55 | 1.332017e-52 |
| MsG0680035831.01 | MsG0880046296.01 | 0.828403 | 9.167893e-55 | 9.103343e-52 |
| MsG0780036509.01 | MsG0880046296.01 | 0.843038 | 1.790771e-58 | 2.766438e-55 |
| MsG0780036596.01 | MsG0880046296.01 | 0.810531 | 1.100655e-50 | 6.650742e-48 |
| MsG0780037679.01 | MsG0880046296.01 | 0.822398 | 2.419949e-53 | 2.023348e-50 |
| MsG0780039323.01 | MsG0880046296.01 | 0.807442 | 5.043600e-50 | 2.809502e-47 |
| MsG0780039338.01 | MsG0880046296.01 | 0.811593 | 6.479297e-51 | 4.026962e-48 |
| MsG0780039874.01 | MsG0880046296.01 | -0.806212 | 9.178135e-50 | 4.953261e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046296.01.T01 | MTR_4g105080 | 92.857 | 196 | 14 | 0 | 266 | 461 | 381 | 576 | 1.94e-128 | 384 |
| MsG0880046296.01.T01 | MTR_4g105080 | 71.774 | 124 | 35 | 0 | 175 | 298 | 189 | 312 | 6.05e-49 | 176 |
| MsG0880046296.01.T01 | MTR_4g105080 | 89.216 | 102 | 10 | 1 | 95 | 196 | 1 | 101 | 3.18e-36 | 141 |
| MsG0880046296.01.T01 | MTR_4g105080 | 92.857 | 196 | 14 | 0 | 266 | 461 | 519 | 714 | 5.02e-127 | 385 |
| MsG0880046296.01.T01 | MTR_4g105080 | 90.957 | 188 | 16 | 1 | 9 | 196 | 53 | 239 | 1.69e-79 | 261 |
| MsG0880046296.01.T01 | MTR_4g105080 | 71.774 | 124 | 35 | 0 | 175 | 298 | 327 | 450 | 3.29e-48 | 176 |
| MsG0880046296.01.T01 | MTR_8g028795 | 33.161 | 193 | 120 | 5 | 7 | 193 | 64 | 253 | 1.93e-26 | 113 |
| MsG0880046296.01.T01 | MTR_8g028795 | 32.609 | 230 | 114 | 9 | 176 | 402 | 345 | 536 | 5.55e-21 | 96.7 |
| MsG0880046296.01.T01 | MTR_8g031070 | 33.333 | 231 | 113 | 9 | 175 | 402 | 304 | 496 | 1.05e-21 | 98.6 |
| MsG0880046296.01.T01 | MTR_8g028780 | 32.609 | 230 | 115 | 8 | 175 | 402 | 331 | 522 | 4.16e-21 | 97.1 |
| MsG0880046296.01.T01 | MTR_8g028780 | 30.286 | 175 | 115 | 4 | 7 | 175 | 51 | 224 | 4.84e-19 | 90.5 |
| MsG0880046296.01.T01 | MTR_8g028780 | 32.609 | 230 | 115 | 8 | 175 | 402 | 331 | 522 | 4.27e-21 | 97.1 |
| MsG0880046296.01.T01 | MTR_8g028780 | 30.286 | 175 | 115 | 4 | 7 | 175 | 51 | 224 | 3.85e-19 | 90.9 |
| MsG0880046296.01.T01 | MTR_1g100150 | 29.143 | 175 | 116 | 4 | 9 | 177 | 53 | 225 | 7.82e-21 | 95.9 |
| MsG0880046296.01.T01 | MTR_1g100150 | 32.308 | 130 | 69 | 2 | 175 | 304 | 330 | 440 | 3.30e-14 | 75.5 |
| MsG0880046296.01.T01 | MTR_1g100130 | 27.429 | 175 | 119 | 5 | 9 | 177 | 58 | 230 | 3.98e-16 | 81.6 |
| MsG0880046296.01.T01 | MTR_1g100130 | 36.082 | 97 | 56 | 2 | 175 | 271 | 335 | 425 | 1.75e-13 | 73.2 |
| MsG0880046296.01.T01 | MTR_2g028530 | 26.596 | 188 | 131 | 5 | 2 | 184 | 72 | 257 | 1.37e-13 | 73.6 |
| MsG0880046296.01.T01 | MTR_1g100130 | 34.375 | 96 | 57 | 1 | 175 | 270 | 224 | 313 | 1.78e-13 | 73.2 |
| MsG0880046296.01.T01 | MTR_1g100130 | 30.000 | 120 | 81 | 3 | 59 | 177 | 2 | 119 | 1.77e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046296.01.T01 | AT5G50160 | 53.723 | 188 | 85 | 2 | 9 | 196 | 53 | 238 | 6.36e-58 | 203 |
| MsG0880046296.01.T01 | AT5G50160 | 37.850 | 214 | 108 | 7 | 269 | 461 | 519 | 728 | 1.03e-32 | 132 |
| MsG0880046296.01.T01 | AT5G50160 | 36.424 | 151 | 81 | 2 | 145 | 281 | 282 | 431 | 3.63e-22 | 100 |
| MsG0880046296.01.T01 | AT5G50160 | 37.850 | 214 | 108 | 7 | 269 | 461 | 340 | 549 | 4.48e-33 | 132 |
| MsG0880046296.01.T01 | AT5G50160 | 36.424 | 151 | 81 | 2 | 145 | 281 | 103 | 252 | 1.57e-22 | 100 |
| MsG0880046296.01.T01 | AT5G50160 | 46.667 | 60 | 31 | 1 | 137 | 196 | 1 | 59 | 7.06e-12 | 67.8 |
| MsG0880046296.01.T01 | AT1G01590 | 39.535 | 129 | 62 | 2 | 176 | 304 | 341 | 453 | 7.71e-21 | 96.3 |
| MsG0880046296.01.T01 | AT1G01590 | 29.070 | 172 | 116 | 2 | 9 | 174 | 60 | 231 | 8.58e-20 | 92.8 |
| MsG0880046296.01.T01 | AT1G01580 | 28.571 | 182 | 125 | 3 | 7 | 184 | 148 | 328 | 1.14e-19 | 92.8 |
| MsG0880046296.01.T01 | AT1G01580 | 43.023 | 86 | 44 | 1 | 186 | 271 | 438 | 518 | 6.05e-16 | 81.3 |
| MsG0880046296.01.T01 | AT1G01580 | 28.571 | 182 | 125 | 3 | 7 | 184 | 70 | 250 | 2.09e-19 | 91.7 |
| MsG0880046296.01.T01 | AT1G01580 | 43.023 | 86 | 44 | 1 | 186 | 271 | 360 | 440 | 6.15e-16 | 80.9 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 363 | 473 | 4.77e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 28.000 | 175 | 114 | 3 | 9 | 174 | 83 | 254 | 8.50e-17 | 83.6 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 363 | 473 | 4.77e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 28.000 | 175 | 114 | 3 | 9 | 174 | 83 | 254 | 8.50e-17 | 83.6 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 364 | 474 | 4.95e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 27.273 | 176 | 115 | 3 | 9 | 174 | 83 | 255 | 3.20e-16 | 82.0 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 341 | 451 | 5.42e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 27.273 | 176 | 115 | 3 | 9 | 174 | 60 | 232 | 2.91e-16 | 82.0 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 340 | 450 | 5.61e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 28.000 | 175 | 114 | 3 | 9 | 174 | 60 | 231 | 8.16e-17 | 83.6 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 340 | 450 | 5.61e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 28.000 | 175 | 114 | 3 | 9 | 174 | 60 | 231 | 8.16e-17 | 83.6 |
| MsG0880046296.01.T01 | AT1G23020 | 38.760 | 129 | 61 | 2 | 176 | 304 | 337 | 447 | 5.79e-19 | 90.5 |
| MsG0880046296.01.T01 | AT1G23020 | 28.488 | 172 | 114 | 3 | 9 | 174 | 60 | 228 | 4.90e-17 | 84.3 |
| MsG0880046296.01.T01 | AT5G23990 | 47.619 | 84 | 37 | 2 | 185 | 268 | 200 | 276 | 3.15e-16 | 81.6 |
| MsG0880046296.01.T01 | AT5G23990 | 47.619 | 84 | 37 | 2 | 185 | 268 | 332 | 408 | 3.43e-16 | 81.6 |
| MsG0880046296.01.T01 | AT5G23990 | 25.882 | 170 | 119 | 3 | 9 | 176 | 52 | 216 | 1.05e-12 | 70.9 |
| MsG0880046296.01.T01 | AT5G23990 | 47.619 | 84 | 37 | 2 | 185 | 268 | 290 | 366 | 3.71e-16 | 81.6 |
| MsG0880046296.01.T01 | AT5G23980 | 46.429 | 84 | 38 | 2 | 185 | 268 | 332 | 408 | 7.49e-16 | 80.5 |
| MsG0880046296.01.T01 | AT5G23980 | 25.806 | 186 | 131 | 4 | 9 | 193 | 52 | 231 | 1.21e-13 | 73.6 |
| MsG0880046296.01.T01 | AT5G49740 | 27.717 | 184 | 107 | 2 | 8 | 177 | 77 | 248 | 6.96e-14 | 74.7 |
| MsG0880046296.01.T01 | AT5G49740 | 27.717 | 184 | 107 | 2 | 8 | 177 | 77 | 248 | 9.79e-14 | 73.9 |
| MsG0880046296.01.T01 | AT5G49730 | 27.326 | 172 | 119 | 2 | 7 | 174 | 67 | 236 | 1.16e-13 | 73.9 |
| MsG0880046296.01.T01 | AT5G49740 | 27.717 | 184 | 107 | 2 | 8 | 177 | 77 | 248 | 1.37e-13 | 73.2 |
| MsG0880046296.01.T01 | AT5G49730 | 26.901 | 171 | 121 | 2 | 7 | 174 | 67 | 236 | 1.97e-13 | 72.8 |
Find 103 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATATTAAAGATCATTTA+TGG | 0.135114 | 8:-71645007 | MsG0880046296.01.T01:three_prime_UTR |
| ATAATTGCTATTGCTATAAT+TGG | 0.176243 | 8:-71647999 | MsG0880046296.01.T01:CDS |
| AAACCACATTCAAGGATAAA+AGG | 0.182915 | 8:+71645083 | None:intergenic |
| CGCCAGCACTTTGTTTGTTT+GGG | 0.192217 | 8:-71647370 | MsG0880046296.01.T01:CDS |
| ACACTTTAGTAGTCTAAATT+TGG | 0.194761 | 8:-71645259 | MsG0880046296.01.T01:exon |
| CAAGAGTTGTATTGGTATTT+AGG | 0.198094 | 8:+71645236 | None:intergenic |
| ATTATAGCAATAGCAATTAT+TGG | 0.198333 | 8:+71648002 | None:intergenic |
| TAAAGATCATTTATGGATTC+TGG | 0.199144 | 8:-71645000 | MsG0880046296.01.T01:three_prime_UTR |
| GTTTGGATGGCTGCTATTAC+TGG | 0.223975 | 8:-71645869 | MsG0880046296.01.T01:CDS |
| GAAGAACATGAAGTTCATTT+TGG | 0.229533 | 8:-71645563 | MsG0880046296.01.T01:CDS |
| GCCATCCAAACTGGACTTTC+AGG | 0.231763 | 8:+71645881 | None:intergenic |
| TCCATATGCTGCATAATAAT+TGG | 0.232641 | 8:+71645904 | None:intergenic |
| GGAGGCAGGCCTAACTTTAA+AGG | 0.237785 | 8:-71645542 | MsG0880046296.01.T01:intron |
| GCGCCAGCACTTTGTTTGTT+TGG | 0.246543 | 8:-71647371 | MsG0880046296.01.T01:CDS |
| CCAAAGAAAAGACTCCTTCT+TGG | 0.273461 | 8:-71645766 | MsG0880046296.01.T01:CDS |
| TTGGCTGTATTTCGTATATT+TGG | 0.274271 | 8:-71647468 | MsG0880046296.01.T01:CDS |
| TTGATTTGAACAGATATATT+AGG | 0.280035 | 8:-71645445 | MsG0880046296.01.T01:intron |
| ACAGCCAACCCTCTTAAAAT+TGG | 0.296428 | 8:+71647483 | None:intergenic |
| TAAACAAAGGTGCTGATAAA+AGG | 0.299046 | 8:-71646370 | MsG0880046296.01.T01:CDS |
| TCCAATTATTATGCAGCATA+TGG | 0.312731 | 8:-71645905 | MsG0880046296.01.T01:CDS |
| GTCTGTGGAACGCCTTTCTT+AGG | 0.318947 | 8:+71645644 | None:intergenic |
| ATGGAATTACCTTTAAAGTT+AGG | 0.331214 | 8:+71645533 | None:intergenic |
| AACTACCAGTATTTCAAAAC+TGG | 0.337767 | 8:+71647766 | None:intergenic |
| TTCAAATATATAACACTTGT+AGG | 0.341605 | 8:+71646533 | None:intergenic |
| GACCTACCTCACTTTGTATA+TGG | 0.342928 | 8:+71647337 | None:intergenic |
| TTTCAGATGGAACTATAGTA+TGG | 0.345437 | 8:+71645804 | None:intergenic |
| TTTGTTAGCAGAAGCTTGTT+TGG | 0.351150 | 8:-71647520 | MsG0880046296.01.T01:CDS |
| TGGATCTGATATTGGAGTTT+TGG | 0.352657 | 8:-71645401 | MsG0880046296.01.T01:CDS |
| TGCAGAAGTGGAAGGAGTTC+AGG | 0.369132 | 8:-71647845 | MsG0880046296.01.T01:intron |
| GAATCTGAGTGTTTGAAGTT+AGG | 0.378131 | 8:-71645328 | MsG0880046296.01.T01:CDS |
| CATGATGTTCTCATCAGCTT+TGG | 0.389412 | 8:+71646457 | None:intergenic |
| AATGAACTTCATGTTCTTCA+AGG | 0.391345 | 8:+71645567 | None:intergenic |
| GTAATAGCAGCCATCCAAAC+TGG | 0.395706 | 8:+71645872 | None:intergenic |
| CTTAGAATAGCAACAAGGTT+TGG | 0.405833 | 8:-71647543 | MsG0880046296.01.T01:CDS |
| AACCACATTCAAGGATAAAA+GGG | 0.418747 | 8:+71645084 | None:intergenic |
| ACTGATTCCTTCATGCTCTC+AGG | 0.423606 | 8:+71645370 | None:intergenic |
| CTACATTATTTGTGGTGCTC+TGG | 0.430461 | 8:+71645136 | None:intergenic |
| GATGGAGAAGGTTGAAGAAA+GGG | 0.435831 | 8:-71645670 | MsG0880046296.01.T01:CDS |
| TTCTTAGTTTCAGCTGACCT+TGG | 0.437129 | 8:+71645593 | None:intergenic |
| AAAGACTCCTTCTTGGATAG+TGG | 0.442694 | 8:-71645759 | MsG0880046296.01.T01:CDS |
| AGATGGAGAAGGTTGAAGAA+AGG | 0.445970 | 8:-71645671 | MsG0880046296.01.T01:CDS |
| TTTAAATAGTCTAATGAAGC+AGG | 0.448724 | 8:+71646311 | None:intergenic |
| GAAGCGTGTGGATCTGATAT+TGG | 0.448770 | 8:-71645409 | MsG0880046296.01.T01:CDS |
| CTGAACAGCAAGAGTTGTAT+TGG | 0.448850 | 8:+71645228 | None:intergenic |
| GGTATACCTGTTGCAATTGA+AGG | 0.469135 | 8:-71646344 | MsG0880046296.01.T01:CDS |
| ATTATATATGATTCTACACT+TGG | 0.476217 | 8:+71645178 | None:intergenic |
| TATCATGTCATAAAGAGTAT+TGG | 0.480329 | 8:+71646403 | None:intergenic |
| GTTAAGTATCACACATGGAT+TGG | 0.480350 | 8:-71647426 | MsG0880046296.01.T01:CDS |
| TAGTATGGTTGAAACAGATT+AGG | 0.480827 | 8:+71645819 | None:intergenic |
| ATGGACCTGAAAGTCCAGTT+TGG | 0.481479 | 8:-71645886 | MsG0880046296.01.T01:CDS |
| TAGGGCCCTTCAATTGCAAC+AGG | 0.481704 | 8:+71646338 | None:intergenic |
| TCAGCTGACCTTGGATCAAA+GGG | 0.483472 | 8:+71645602 | None:intergenic |
| TTCAGCTGACCTTGGATCAA+AGG | 0.487298 | 8:+71645601 | None:intergenic |
| CAACTATATCTCATCTTCAA+TGG | 0.489902 | 8:-71646505 | MsG0880046296.01.T01:CDS |
| CTAAATAGTAAGTCTTCTGC+AGG | 0.493276 | 8:-71648050 | MsG0880046296.01.T01:CDS |
| CTAGTGGTGAACAGTGTAGT+TGG | 0.497615 | 8:-71647797 | MsG0880046296.01.T01:CDS |
| TAGGAAAATAAGAAAAGTGA+TGG | 0.497785 | 8:+71645838 | None:intergenic |
| TGATTAAATGTCAAGGGTGG+TGG | 0.504355 | 8:-71646427 | MsG0880046296.01.T01:CDS |
| GTTGCAATTGAAGGGCCCTA+TGG | 0.513882 | 8:-71646335 | MsG0880046296.01.T01:CDS |
| CCAGTATTTCAAAACTGGAT+AGG | 0.525480 | 8:+71647771 | None:intergenic |
| AAATTAAACCCTTTGATCCA+AGG | 0.534507 | 8:-71645610 | MsG0880046296.01.T01:CDS |
| TCAAATATATAACACTTGTA+GGG | 0.536178 | 8:+71646534 | None:intergenic |
| GTCTAATGAAGCAGGTCCAT+AGG | 0.538097 | 8:+71646319 | None:intergenic |
| ATGAACTTCATGTTCTTCAA+GGG | 0.543742 | 8:+71645568 | None:intergenic |
| TATGTGAACTACATTATTTG+TGG | 0.545711 | 8:+71645128 | None:intergenic |
| TGATAGCAATTGTGTTGAGA+TGG | 0.546274 | 8:-71645688 | MsG0880046296.01.T01:CDS |
| ACTACACTGTTCACCACTAG+TGG | 0.547544 | 8:+71647800 | None:intergenic |
| ACCCCAAACAAACAAAGTGC+TGG | 0.548647 | 8:+71647368 | None:intergenic |
| TCTAATGAAGCAGGTCCATA+GGG | 0.551514 | 8:+71646320 | None:intergenic |
| CGTTCCACAGACATCGCAGA+TGG | 0.560042 | 8:-71645633 | MsG0880046296.01.T01:CDS |
| AGTAGATCCACTATCCAAGA+AGG | 0.560330 | 8:+71645752 | None:intergenic |
| CATTGAAGATGAGATATAGT+TGG | 0.565837 | 8:+71646506 | None:intergenic |
| ATTTCCATCTGCGATGTCTG+TGG | 0.573154 | 8:+71645629 | None:intergenic |
| AAGCTGGATATCAAAGAAGC+GGG | 0.574886 | 8:-71647956 | MsG0880046296.01.T01:intron |
| AAGAAAGGGATTCCTAAGAA+AGG | 0.575794 | 8:-71645656 | MsG0880046296.01.T01:CDS |
| ATACAACTCTTGCTGTTCAG+TGG | 0.579378 | 8:-71645225 | MsG0880046296.01.T01:three_prime_UTR |
| GATTCTACACTTGGGAGTGA+AGG | 0.587916 | 8:+71645187 | None:intergenic |
| GCCAGCACTTTGTTTGTTTG+GGG | 0.590787 | 8:-71647369 | MsG0880046296.01.T01:CDS |
| TTATAAACTGCAGAAGTGGA+AGG | 0.592835 | 8:-71647853 | MsG0880046296.01.T01:intron |
| TGGATGGCTGCTATTACTGG+AGG | 0.596455 | 8:-71645866 | MsG0880046296.01.T01:CDS |
| GTATACCTGTTGCAATTGAA+GGG | 0.597798 | 8:-71646343 | MsG0880046296.01.T01:CDS |
| AGAGAGTGAAGAGTGAAGCA+TGG | 0.598825 | 8:+71645289 | None:intergenic |
| ACCTGAAAGTCCAGTTTGGA+TGG | 0.603632 | 8:-71645882 | MsG0880046296.01.T01:CDS |
| AAAGGTGCTGATAAAAGGAA+AGG | 0.621349 | 8:-71646365 | MsG0880046296.01.T01:CDS |
| CTTCAGTTAAGTATCACACA+TGG | 0.622062 | 8:-71647431 | MsG0880046296.01.T01:CDS |
| AAAGCTGGATATCAAAGAAG+CGG | 0.623426 | 8:-71647957 | MsG0880046296.01.T01:CDS |
| CAGCCTCCATATACAAAGTG+AGG | 0.626839 | 8:-71647343 | MsG0880046296.01.T01:CDS |
| CTACCTCACTTTGTATATGG+AGG | 0.627831 | 8:+71647340 | None:intergenic |
| ACCACATTCAAGGATAAAAG+GGG | 0.637408 | 8:+71645085 | None:intergenic |
| TGTCTTCTCAAATCCACTAG+TGG | 0.637702 | 8:-71647813 | MsG0880046296.01.T01:CDS |
| TTATATATGATTCTACACTT+GGG | 0.637805 | 8:+71645179 | None:intergenic |
| CTGTGATGATTAAATGTCAA+GGG | 0.637969 | 8:-71646433 | MsG0880046296.01.T01:CDS |
| CTCCATATACAAAGTGAGGT+AGG | 0.641449 | 8:-71647339 | MsG0880046296.01.T01:intron |
| TGAGAGCATGAAGGAATCAG+TGG | 0.658286 | 8:-71645368 | MsG0880046296.01.T01:CDS |
| ATACAAACTGAATTAAACAA+AGG | 0.659472 | 8:-71646383 | MsG0880046296.01.T01:CDS |
| TCTGTGATGATTAAATGTCA+AGG | 0.676323 | 8:-71646434 | MsG0880046296.01.T01:CDS |
| ACACTTGGGAGTGAAGGCAA+AGG | 0.686030 | 8:+71645193 | None:intergenic |
| TTGTGGTCCTGAGAGCATGA+AGG | 0.688445 | 8:-71645377 | MsG0880046296.01.T01:CDS |
| AAATTCAAGAATGAAGCGTG+TGG | 0.689017 | 8:-71645421 | MsG0880046296.01.T01:CDS |
| CCACATTCAAGGATAAAAGG+GGG | 0.690410 | 8:+71645086 | None:intergenic |
| CAATTGTGTTGAGATGGAGA+AGG | 0.701994 | 8:-71645682 | MsG0880046296.01.T01:CDS |
| AGTTTCTTAGAATAGCAACA+AGG | 0.702556 | 8:-71647548 | MsG0880046296.01.T01:CDS |
| TGATGATTAAATGTCAAGGG+TGG | 0.754801 | 8:-71646430 | MsG0880046296.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATTAAAGATCATTTA+TGG | - | Chr8:71648046-71648065 | MsG0880046296.01.T01:CDS | 10.0% |
| !!! | ATATTTTTTAATTACTTGAA+TGG | - | Chr8:71645147-71645166 | MsG0880046296.01.T01:three_prime_UTR | 10.0% |
| !! | AAAATAATATTCCATTCAAA+CGG | - | Chr8:71646462-71646481 | MsG0880046296.01.T01:CDS | 15.0% |
| !! | TAAAAATAACTAAAGAAACA+TGG | + | Chr8:71645960-71645979 | None:intergenic | 15.0% |
| !!! | TATATATTTTTAGAAATGCA+AGG | + | Chr8:71647555-71647574 | None:intergenic | 15.0% |
| !!! | TTAATATTATTCTTTTTGTC+TGG | + | Chr8:71648036-71648055 | None:intergenic | 15.0% |
| !! | AAACTTTCTTCTTCTAATTT+GGG | + | Chr8:71646178-71646197 | None:intergenic | 20.0% |
| !! | AACAAAATAAATTTCCATCA+AGG | - | Chr8:71646921-71646940 | MsG0880046296.01.T01:intron | 20.0% |
| !! | ATACAAACTGAATTAAACAA+AGG | - | Chr8:71646670-71646689 | MsG0880046296.01.T01:intron | 20.0% |
| !! | ATTATAGCAATAGCAATTAT+TGG | + | Chr8:71645054-71645073 | None:intergenic | 20.0% |
| !! | ATTATATATGATTCTACACT+TGG | + | Chr8:71647878-71647897 | None:intergenic | 20.0% |
| !! | TCAAATATATAACACTTGTA+GGG | + | Chr8:71646522-71646541 | None:intergenic | 20.0% |
| !! | TTATATATGATTCTACACTT+GGG | + | Chr8:71647877-71647896 | None:intergenic | 20.0% |
| !! | TTCAAATATATAACACTTGT+AGG | + | Chr8:71646523-71646542 | None:intergenic | 20.0% |
| !!! | ATAATTGCTATTGCTATAAT+TGG | - | Chr8:71645054-71645073 | MsG0880046296.01.T01:three_prime_UTR | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+AGG | + | Chr8:71645746-71645765 | None:intergenic | 20.0% |
| !!! | TTGATGGAAATTTATTTTGT+TGG | + | Chr8:71646922-71646941 | None:intergenic | 20.0% |
| !!! | TTGATTTGAACAGATATATT+AGG | - | Chr8:71647608-71647627 | MsG0880046296.01.T01:intron | 20.0% |
| !!! | TTTTCTTTTTATAGTCTTCT+TGG | - | Chr8:71645309-71645328 | MsG0880046296.01.T01:CDS | 20.0% |
| ! | AAAATTATAAACTGCAGAAG+TGG | - | Chr8:71645196-71645215 | MsG0880046296.01.T01:three_prime_UTR | 25.0% |
| ! | AACTTTCTTCTTCTAATTTG+GGG | + | Chr8:71646177-71646196 | None:intergenic | 25.0% |
| ! | AATTTAGTACTTGGATCTTT+AGG | + | Chr8:71646405-71646424 | None:intergenic | 25.0% |
| ! | ACACTTTAGTAGTCTAAATT+TGG | - | Chr8:71647794-71647813 | MsG0880046296.01.T01:CDS | 25.0% |
| ! | ATAACTAAAGAAACATGGTT+AGG | + | Chr8:71645955-71645974 | None:intergenic | 25.0% |
| ! | CAAACTTTCTTCTTCTAATT+TGG | + | Chr8:71646179-71646198 | None:intergenic | 25.0% |
| ! | CATCATAATTTACTTTCAGA+TGG | - | Chr8:71645475-71645494 | MsG0880046296.01.T01:intron | 25.0% |
| ! | CTGTACATAAATTTAGTACT+TGG | + | Chr8:71646414-71646433 | None:intergenic | 25.0% |
| ! | GATTTAGACATACTTTAAGT+TGG | - | Chr8:71645418-71645437 | MsG0880046296.01.T01:CDS | 25.0% |
| ! | TAAAGATCATTTATGGATTC+TGG | - | Chr8:71648053-71648072 | MsG0880046296.01.T01:CDS | 25.0% |
| ! | TAACTAAAGAAACATGGTTA+GGG | + | Chr8:71645954-71645973 | None:intergenic | 25.0% |
| ! | TAGGAAAATAAGAAAAGTGA+TGG | + | Chr8:71647218-71647237 | None:intergenic | 25.0% |
| ! | TATGTGAACTACATTATTTG+TGG | + | Chr8:71647928-71647947 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATACGAAC+TGG | - | Chr8:71645928-71645947 | MsG0880046296.01.T01:intron | 25.0% |
| ! | TTTAAATAGTCTAATGAAGC+AGG | + | Chr8:71646745-71646764 | None:intergenic | 25.0% |
| ! | TTTGTTAAACAGATTTGAAG+TGG | - | Chr8:71646076-71646095 | MsG0880046296.01.T01:intron | 25.0% |
| !! | AAACTTTTAAACCACATTCA+AGG | + | Chr8:71647981-71648000 | None:intergenic | 25.0% |
| !! | AATGAAATTTTTCGCTTGAT+CGG | + | Chr8:71647021-71647040 | None:intergenic | 25.0% |
| !! | CTTCTGCAGTTTATAATTTT+AGG | + | Chr8:71645196-71645215 | None:intergenic | 25.0% |
| !! | TATAATTGGACTTCTTTTCT+TGG | - | Chr8:71645068-71645087 | MsG0880046296.01.T01:three_prime_UTR | 25.0% |
| !! | TATCATGTCATAAAGAGTAT+TGG | + | Chr8:71646653-71646672 | None:intergenic | 25.0% |
| !!! | ATGGAATTACCTTTAAAGTT+AGG | + | Chr8:71647523-71647542 | None:intergenic | 25.0% |
| !!! | CATCAACTTTTTGAAATCAT+TGG | + | Chr8:71645359-71645378 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTGTTTCATGCT+GGG | - | Chr8:71646241-71646260 | MsG0880046296.01.T01:intron | 25.0% |
| !!! | TTCTTCTTCCAATTTTAAGA+GGG | - | Chr8:71645562-71645581 | MsG0880046296.01.T01:CDS | 25.0% |
| AAACCACATTCAAGGATAAA+AGG | + | Chr8:71647973-71647992 | None:intergenic | 30.0% | |
| AAATTAAACCCTTTGATCCA+AGG | - | Chr8:71647443-71647462 | MsG0880046296.01.T01:CDS | 30.0% | |
| AACCACATTCAAGGATAAAA+GGG | + | Chr8:71647972-71647991 | None:intergenic | 30.0% | |
| AACTACCAGTATTTCAAAAC+TGG | + | Chr8:71645290-71645309 | None:intergenic | 30.0% | |
| AACTTGTACATGTCATTAAG+AGG | - | Chr8:71646948-71646967 | MsG0880046296.01.T01:intron | 30.0% | |
| AATGAACTTCATGTTCTTCA+AGG | + | Chr8:71647489-71647508 | None:intergenic | 30.0% | |
| ACTTGTACATGTCATTAAGA+GGG | - | Chr8:71646949-71646968 | MsG0880046296.01.T01:intron | 30.0% | |
| AGTTTCTTAGAATAGCAACA+AGG | - | Chr8:71645505-71645524 | MsG0880046296.01.T01:intron | 30.0% | |
| ATAAGCTGTTAATCTCTTCA+GGG | + | Chr8:71645888-71645907 | None:intergenic | 30.0% | |
| ATGAACTTCATGTTCTTCAA+GGG | + | Chr8:71647488-71647507 | None:intergenic | 30.0% | |
| CAACTATATCTCATCTTCAA+TGG | - | Chr8:71646548-71646567 | MsG0880046296.01.T01:CDS | 30.0% | |
| CATTGAAGATGAGATATAGT+TGG | + | Chr8:71646550-71646569 | None:intergenic | 30.0% | |
| CTGTGATGATTAAATGTCAA+GGG | - | Chr8:71646620-71646639 | MsG0880046296.01.T01:intron | 30.0% | |
| GAAAGTAAAAACACTGCAAT+TGG | - | Chr8:71647114-71647133 | MsG0880046296.01.T01:intron | 30.0% | |
| TAGTATGGTTGAAACAGATT+AGG | + | Chr8:71647237-71647256 | None:intergenic | 30.0% | |
| TCCAATTATTATGCAGCATA+TGG | - | Chr8:71647148-71647167 | MsG0880046296.01.T01:intron | 30.0% | |
| TCCATATGCTGCATAATAAT+TGG | + | Chr8:71647152-71647171 | None:intergenic | 30.0% | |
| TCTGTGATGATTAAATGTCA+AGG | - | Chr8:71646619-71646638 | MsG0880046296.01.T01:intron | 30.0% | |
| TTGGCTGTATTTCGTATATT+TGG | - | Chr8:71645585-71645604 | MsG0880046296.01.T01:CDS | 30.0% | |
| TTTCAGATGGAACTATAGTA+TGG | + | Chr8:71647252-71647271 | None:intergenic | 30.0% | |
| ! | AGTCTTTTCTTTGGACAATT+TGG | + | Chr8:71647281-71647300 | None:intergenic | 30.0% |
| ! | ATACTTTTCGCTACAATACA+TGG | - | Chr8:71645660-71645679 | MsG0880046296.01.T01:CDS | 30.0% |
| ! | CAAGAGTTGTATTGGTATTT+AGG | + | Chr8:71647820-71647839 | None:intergenic | 30.0% |
| ! | CTTCTTCTTCCAATTTTAAG+AGG | - | Chr8:71645561-71645580 | MsG0880046296.01.T01:CDS | 30.0% |
| ! | GAAGAACATGAAGTTCATTT+TGG | - | Chr8:71647490-71647509 | MsG0880046296.01.T01:CDS | 30.0% |
| ! | TGTATTTTCGATCATTTGCA+GGG | - | Chr8:71646485-71646504 | MsG0880046296.01.T01:CDS | 30.0% |
| ! | TTTTTATAGTCTTCTTGGCA+TGG | - | Chr8:71645314-71645333 | MsG0880046296.01.T01:CDS | 30.0% |
| !! | AATTTGGAATGCTTTTCAGA+TGG | + | Chr8:71647265-71647284 | None:intergenic | 30.0% |
| !! | ATTTTTCTTGTTTCATGCTG+GGG | - | Chr8:71646242-71646261 | MsG0880046296.01.T01:intron | 30.0% |
| !! | CATACTTTAAGTTGGATGAT+AGG | - | Chr8:71645426-71645445 | MsG0880046296.01.T01:CDS | 30.0% |
| !! | GTATTTTTCTTGTTTCATGC+TGG | - | Chr8:71646240-71646259 | MsG0880046296.01.T01:intron | 30.0% |
| !! | TAAACAAAGGTGCTGATAAA+AGG | - | Chr8:71646683-71646702 | MsG0880046296.01.T01:intron | 30.0% |
| AAAGCTGGATATCAAAGAAG+CGG | - | Chr8:71645096-71645115 | MsG0880046296.01.T01:three_prime_UTR | 35.0% | |
| AAATGCAAGGAAAGAGACAA+TGG | + | Chr8:71647542-71647561 | None:intergenic | 35.0% | |
| AAATTCAAGAATGAAGCGTG+TGG | - | Chr8:71647632-71647651 | MsG0880046296.01.T01:intron | 35.0% | |
| AAGAAAGGGATTCCTAAGAA+AGG | - | Chr8:71647397-71647416 | MsG0880046296.01.T01:CDS | 35.0% | |
| ACAGTTTGTCAAGGCTAAAA+AGG | + | Chr8:71646302-71646321 | None:intergenic | 35.0% | |
| ACCACATTCAAGGATAAAAG+GGG | + | Chr8:71647971-71647990 | None:intergenic | 35.0% | |
| AGGTAGGTCTATTCCTTATT+TGG | - | Chr8:71645730-71645749 | MsG0880046296.01.T01:CDS | 35.0% | |
| ATTGAACATGTAAGTGCTTC+TGG | - | Chr8:71645396-71645415 | MsG0880046296.01.T01:CDS | 35.0% | |
| CATAAGCTGTTAATCTCTTC+AGG | + | Chr8:71645889-71645908 | None:intergenic | 35.0% | |
| CCAGTATTTCAAAACTGGAT+AGG | + | Chr8:71645285-71645304 | None:intergenic | 35.0% | |
| CTAAATAGTAAGTCTTCTGC+AGG | - | Chr8:71645003-71645022 | MsG0880046296.01.T01:three_prime_UTR | 35.0% | |
| CTTAGAATAGCAACAAGGTT+TGG | - | Chr8:71645510-71645529 | MsG0880046296.01.T01:intron | 35.0% | |
| CTTCAGTTAAGTATCACACA+TGG | - | Chr8:71645622-71645641 | MsG0880046296.01.T01:CDS | 35.0% | |
| GTATACCTGTTGCAATTGAA+GGG | - | Chr8:71646710-71646729 | MsG0880046296.01.T01:intron | 35.0% | |
| GTTAAGTATCACACATGGAT+TGG | - | Chr8:71645627-71645646 | MsG0880046296.01.T01:CDS | 35.0% | |
| TCGAAAATACACCGTTTGAA+TGG | + | Chr8:71646476-71646495 | None:intergenic | 35.0% | |
| TGATAGCAATTGTGTTGAGA+TGG | - | Chr8:71647365-71647384 | MsG0880046296.01.T01:CDS | 35.0% | |
| TGATGATTAAATGTCAAGGG+TGG | - | Chr8:71646623-71646642 | MsG0880046296.01.T01:intron | 35.0% | |
| TGTACAAGTTGTATCCTTGA+TGG | + | Chr8:71646938-71646957 | None:intergenic | 35.0% | |
| TTATAAACTGCAGAAGTGGA+AGG | - | Chr8:71645200-71645219 | MsG0880046296.01.T01:three_prime_UTR | 35.0% | |
| TTATACGCAACAGTTTGTCA+AGG | + | Chr8:71646311-71646330 | None:intergenic | 35.0% | |
| ! | AACTCCATTTCTGAGCATTT+TGG | - | Chr8:71646878-71646897 | MsG0880046296.01.T01:intron | 35.0% |
| ! | GAACATGAAGTTCATTTTGG+AGG | - | Chr8:71647493-71647512 | MsG0880046296.01.T01:CDS | 35.0% |
| ! | GAATCTGAGTGTTTGAAGTT+AGG | - | Chr8:71647725-71647744 | MsG0880046296.01.T01:CDS | 35.0% |
| ! | GTGTATTTTCGATCATTTGC+AGG | - | Chr8:71646484-71646503 | MsG0880046296.01.T01:CDS | 35.0% |
| ! | TGGATCTGATATTGGAGTTT+TGG | - | Chr8:71647652-71647671 | MsG0880046296.01.T01:intron | 35.0% |
| ! | TTTGTTAGCAGAAGCTTGTT+TGG | - | Chr8:71645533-71645552 | MsG0880046296.01.T01:intron | 35.0% |
| !! | AAAGGTGCTGATAAAAGGAA+AGG | - | Chr8:71646688-71646707 | MsG0880046296.01.T01:intron | 35.0% |
| !! | TCTTCCAATTTTAAGAGGGT+TGG | - | Chr8:71645566-71645585 | MsG0880046296.01.T01:CDS | 35.0% |
| !!! | CCTATCCAGTTTTGAAATAC+TGG | - | Chr8:71645282-71645301 | MsG0880046296.01.T01:CDS | 35.0% |
| !!! | GATATTGGAGTTTTGGTTTG+TGG | - | Chr8:71647659-71647678 | MsG0880046296.01.T01:intron | 35.0% |
| AAAGACTCCTTCTTGGATAG+TGG | - | Chr8:71647294-71647313 | MsG0880046296.01.T01:intron | 40.0% | |
| AAGCTGGATATCAAAGAAGC+GGG | - | Chr8:71645097-71645116 | MsG0880046296.01.T01:three_prime_UTR | 40.0% | |
| ACAACTAAGCGTGGGAATTA+CGG | - | Chr8:71647072-71647091 | MsG0880046296.01.T01:intron | 40.0% | |
| ACAAGAAACACAACTAAGCG+TGG | - | Chr8:71647063-71647082 | MsG0880046296.01.T01:intron | 40.0% | |
| ACAGCCAACCCTCTTAAAAT+TGG | + | Chr8:71645573-71645592 | None:intergenic | 40.0% | |
| AGATGGAGAAGGTTGAAGAA+AGG | - | Chr8:71647382-71647401 | MsG0880046296.01.T01:CDS | 40.0% | |
| AGTAGATCCACTATCCAAGA+AGG | + | Chr8:71647304-71647323 | None:intergenic | 40.0% | |
| ATCAAGTCCAAAAACCTGCA+TGG | - | Chr8:71646335-71646354 | MsG0880046296.01.T01:CDS | 40.0% | |
| CAAGAAACACAACTAAGCGT+GGG | - | Chr8:71647064-71647083 | MsG0880046296.01.T01:intron | 40.0% | |
| CAATTGTGTTGAGATGGAGA+AGG | - | Chr8:71647371-71647390 | MsG0880046296.01.T01:CDS | 40.0% | |
| CAGACATGACAGTGTGATTA+TGG | - | Chr8:71646836-71646855 | MsG0880046296.01.T01:intron | 40.0% | |
| CATGATGTTCTCATCAGCTT+TGG | + | Chr8:71646599-71646618 | None:intergenic | 40.0% | |
| CCAAAGAAAAGACTCCTTCT+TGG | - | Chr8:71647287-71647306 | MsG0880046296.01.T01:intron | 40.0% | |
| CCACATTCAAGGATAAAAGG+GGG | + | Chr8:71647970-71647989 | None:intergenic | 40.0% | |
| CTACATTATTTGTGGTGCTC+TGG | + | Chr8:71647920-71647939 | None:intergenic | 40.0% | |
| CTACCTCACTTTGTATATGG+AGG | + | Chr8:71645716-71645735 | None:intergenic | 40.0% | |
| CTCCATATACAAAGTGAGGT+AGG | - | Chr8:71645714-71645733 | MsG0880046296.01.T01:CDS | 40.0% | |
| CTGAACAGCAAGAGTTGTAT+TGG | + | Chr8:71647828-71647847 | None:intergenic | 40.0% | |
| GACCTACCTCACTTTGTATA+TGG | + | Chr8:71645719-71645738 | None:intergenic | 40.0% | |
| GATGGAGAAGGTTGAAGAAA+GGG | - | Chr8:71647383-71647402 | MsG0880046296.01.T01:CDS | 40.0% | |
| GGTATACCTGTTGCAATTGA+AGG | - | Chr8:71646709-71646728 | MsG0880046296.01.T01:intron | 40.0% | |
| GTGAGGTAACGAAGATAACA+AGG | + | Chr8:71646152-71646171 | None:intergenic | 40.0% | |
| TCTAATGAAGCAGGTCCATA+GGG | + | Chr8:71646736-71646755 | None:intergenic | 40.0% | |
| TCTGCCAAAATGCTCAGAAA+TGG | + | Chr8:71646885-71646904 | None:intergenic | 40.0% | |
| TCTTCTAATTTGGGGAAGTG+AGG | + | Chr8:71646169-71646188 | None:intergenic | 40.0% | |
| TGATTAAATGTCAAGGGTGG+TGG | - | Chr8:71646626-71646645 | MsG0880046296.01.T01:intron | 40.0% | |
| TGGGGATAAGCACTTCTATA+TGG | - | Chr8:71646260-71646279 | MsG0880046296.01.T01:intron | 40.0% | |
| TGTCTTCTCAAATCCACTAG+TGG | - | Chr8:71645240-71645259 | MsG0880046296.01.T01:three_prime_UTR | 40.0% | |
| TTCTTAGTTTCAGCTGACCT+TGG | + | Chr8:71647463-71647482 | None:intergenic | 40.0% | |
| ! | AATTCTAGCTGAAACCATGC+AGG | + | Chr8:71646352-71646371 | None:intergenic | 40.0% |
| ! | CCAAGAAGGAGTCTTTTCTT+TGG | + | Chr8:71647290-71647309 | None:intergenic | 40.0% |
| ! | CTTTTCTTGGACTCAAAAGC+TGG | - | Chr8:71645081-71645100 | MsG0880046296.01.T01:three_prime_UTR | 40.0% |
| ! | GATTTGAAGTGGCAAAAGAC+AGG | - | Chr8:71646087-71646106 | MsG0880046296.01.T01:intron | 40.0% |
| !! | ATACAACTCTTGCTGTTCAG+TGG | - | Chr8:71647828-71647847 | MsG0880046296.01.T01:CDS | 40.0% |
| !! | ATGAAGTTCATTTTGGAGGC+AGG | - | Chr8:71647497-71647516 | MsG0880046296.01.T01:CDS | 40.0% |
| AATTAGCTCCACAGCTTCAC+AGG | + | Chr8:71646379-71646398 | None:intergenic | 45.0% | |
| ACAGGACGTATATACCTTGC+TGG | - | Chr8:71646105-71646124 | MsG0880046296.01.T01:intron | 45.0% | |
| ACCCCAAACAAACAAAGTGC+TGG | + | Chr8:71645688-71645707 | None:intergenic | 45.0% | |
| ACCTGAAAGTCCAGTTTGGA+TGG | - | Chr8:71647171-71647190 | MsG0880046296.01.T01:intron | 45.0% | |
| ACTACACTGTTCACCACTAG+TGG | + | Chr8:71645256-71645275 | None:intergenic | 45.0% | |
| AGAGAGTGAAGAGTGAAGCA+TGG | + | Chr8:71647767-71647786 | None:intergenic | 45.0% | |
| AGGACGTATATACCTTGCTG+GGG | - | Chr8:71646107-71646126 | MsG0880046296.01.T01:intron | 45.0% | |
| AGGCTAAAAAGGAACACTCC+TGG | + | Chr8:71646291-71646310 | None:intergenic | 45.0% | |
| AGTGTGATTATGGTTGCTGG+AGG | - | Chr8:71646846-71646865 | MsG0880046296.01.T01:intron | 45.0% | |
| ATGGACCTGAAAGTCCAGTT+TGG | - | Chr8:71647167-71647186 | MsG0880046296.01.T01:intron | 45.0% | |
| ATTAGCTCCACAGCTTCACA+GGG | + | Chr8:71646378-71646397 | None:intergenic | 45.0% | |
| ATTATGGTTGCTGGAGGTAG+TGG | - | Chr8:71646852-71646871 | MsG0880046296.01.T01:intron | 45.0% | |
| ATTTCCATCTGCGATGTCTG+TGG | + | Chr8:71647427-71647446 | None:intergenic | 45.0% | |
| CACTTCTATATGGTCTTCCC+AGG | - | Chr8:71646270-71646289 | MsG0880046296.01.T01:intron | 45.0% | |
| CAGCCTCCATATACAAAGTG+AGG | - | Chr8:71645710-71645729 | MsG0880046296.01.T01:CDS | 45.0% | |
| CAGGACGTATATACCTTGCT+GGG | - | Chr8:71646106-71646125 | MsG0880046296.01.T01:intron | 45.0% | |
| CATTCAAGGATAAAAGGGGG+AGG | + | Chr8:71647967-71647986 | None:intergenic | 45.0% | |
| CTAGTGGTGAACAGTGTAGT+TGG | - | Chr8:71645256-71645275 | MsG0880046296.01.T01:exon | 45.0% | |
| GAAGCGTGTGGATCTGATAT+TGG | - | Chr8:71647644-71647663 | MsG0880046296.01.T01:intron | 45.0% | |
| GACAGTGTGATTATGGTTGC+TGG | - | Chr8:71646843-71646862 | MsG0880046296.01.T01:intron | 45.0% | |
| GATTCTACACTTGGGAGTGA+AGG | + | Chr8:71647869-71647888 | None:intergenic | 45.0% | |
| GGCTAAAAAGGAACACTCCT+GGG | + | Chr8:71646290-71646309 | None:intergenic | 45.0% | |
| GGTAACGAAGATAACAAGGC+CGG | + | Chr8:71646148-71646167 | None:intergenic | 45.0% | |
| GTAATAGCAGCCATCCAAAC+TGG | + | Chr8:71647184-71647203 | None:intergenic | 45.0% | |
| GTCTAATGAAGCAGGTCCAT+AGG | + | Chr8:71646737-71646756 | None:intergenic | 45.0% | |
| GTTTGGATGGCTGCTATTAC+TGG | - | Chr8:71647184-71647203 | MsG0880046296.01.T01:intron | 45.0% | |
| TCAGCTGACCTTGGATCAAA+GGG | + | Chr8:71647454-71647473 | None:intergenic | 45.0% | |
| TTCAGCTGACCTTGGATCAA+AGG | + | Chr8:71647455-71647474 | None:intergenic | 45.0% | |
| ! | AATTTTCCCCTGTGAAGCTG+TGG | - | Chr8:71646368-71646387 | MsG0880046296.01.T01:CDS | 45.0% |
| ! | ACTGATTCCTTCATGCTCTC+AGG | + | Chr8:71647686-71647705 | None:intergenic | 45.0% |
| ! | CCCCCTTTTATCCTTGAATG+TGG | - | Chr8:71647967-71647986 | MsG0880046296.01.T01:CDS | 45.0% |
| ! | CGCCAGCACTTTGTTTGTTT+GGG | - | Chr8:71645683-71645702 | MsG0880046296.01.T01:CDS | 45.0% |
| ! | GCCAGCACTTTGTTTGTTTG+GGG | - | Chr8:71645684-71645703 | MsG0880046296.01.T01:CDS | 45.0% |
| ! | GCTGAAACCATGCAGGTTTT+TGG | + | Chr8:71646345-71646364 | None:intergenic | 45.0% |
| ! | TGAGAGCATGAAGGAATCAG+TGG | - | Chr8:71647685-71647704 | MsG0880046296.01.T01:CDS | 45.0% |
| ACACTTGGGAGTGAAGGCAA+AGG | + | Chr8:71647863-71647882 | None:intergenic | 50.0% | |
| CAAGTGTAATCTCCCCAGCA+AGG | + | Chr8:71646122-71646141 | None:intergenic | 50.0% | |
| GCCATCCAAACTGGACTTTC+AGG | + | Chr8:71647175-71647194 | None:intergenic | 50.0% | |
| GGAGGCAGGCCTAACTTTAA+AGG | - | Chr8:71647511-71647530 | MsG0880046296.01.T01:CDS | 50.0% | |
| GTCTGTGGAACGCCTTTCTT+AGG | + | Chr8:71647412-71647431 | None:intergenic | 50.0% | |
| GTTGCAATTGAAGGGCCCTA+TGG | - | Chr8:71646718-71646737 | MsG0880046296.01.T01:intron | 50.0% | |
| TAGGGCCCTTCAATTGCAAC+AGG | + | Chr8:71646718-71646737 | None:intergenic | 50.0% | |
| TGCAGAAGTGGAAGGAGTTC+AGG | - | Chr8:71645208-71645227 | MsG0880046296.01.T01:three_prime_UTR | 50.0% | |
| TGGATGGCTGCTATTACTGG+AGG | - | Chr8:71647187-71647206 | MsG0880046296.01.T01:intron | 50.0% | |
| TTAGCTCCACAGCTTCACAG+GGG | + | Chr8:71646377-71646396 | None:intergenic | 50.0% | |
| ! | GCGCCAGCACTTTGTTTGTT+TGG | - | Chr8:71645682-71645701 | MsG0880046296.01.T01:CDS | 50.0% |
| ! | GGGGAGATTACACTTGTTGC+CGG | - | Chr8:71646126-71646145 | MsG0880046296.01.T01:intron | 50.0% |
| ! | TTGTGGTCCTGAGAGCATGA+AGG | - | Chr8:71647676-71647695 | MsG0880046296.01.T01:CDS | 50.0% |
| CGTTCCACAGACATCGCAGA+TGG | - | Chr8:71647420-71647439 | MsG0880046296.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 71645000 | 71648075 | 71645000 | ID=MsG0880046296.01;Name=MsG0880046296.01 |
| Chr8 | mRNA | 71645000 | 71648075 | 71645000 | ID=MsG0880046296.01.T01;Parent=MsG0880046296.01;Name=MsG0880046296.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.6|0.5|1|0.8|0.83|6|273|461 |
| Chr8 | exon | 71645000 | 71645454 | 71645000 | ID=MsG0880046296.01.T01:exon:15562;Parent=MsG0880046296.01.T01 |
| Chr8 | exon | 71645543 | 71645934 | 71645543 | ID=MsG0880046296.01.T01:exon:15561;Parent=MsG0880046296.01.T01 |
| Chr8 | exon | 71646311 | 71646569 | 71646311 | ID=MsG0880046296.01.T01:exon:15560;Parent=MsG0880046296.01.T01 |
| Chr8 | exon | 71647340 | 71647581 | 71647340 | ID=MsG0880046296.01.T01:exon:15559;Parent=MsG0880046296.01.T01 |
| Chr8 | exon | 71647671 | 71647862 | 71647671 | ID=MsG0880046296.01.T01:exon:15558;Parent=MsG0880046296.01.T01 |
| Chr8 | exon | 71647957 | 71648075 | 71647957 | ID=MsG0880046296.01.T01:exon:15557;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71647957 | 71648075 | 71647957 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71647671 | 71647862 | 71647671 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71647340 | 71647581 | 71647340 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71646311 | 71646569 | 71646311 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71645543 | 71645934 | 71645543 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | CDS | 71645273 | 71645454 | 71645273 | ID=MsG0880046296.01.T01:cds;Parent=MsG0880046296.01.T01 |
| Chr8 | three_prime_UTR | 71645000 | 71645272 | 71645000 | ID=MsG0880046296.01.T01:three_prime_utr;Parent=MsG0880046296.01.T01 |
| Gene Sequence |
| Protein sequence |
