Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046207.01.T01 | XP_013457676.1 | 95.105 | 286 | 14 | 0 | 1 | 286 | 1 | 286 | 0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046207.01.T01 | Q9LN77 | 67.658 | 269 | 83 | 3 | 16 | 282 | 25 | 291 | 1.28E-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046207.01.T01 | A0A072UPT1 | 95.105 | 286 | 14 | 0 | 1 | 286 | 1 | 286 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048748.01 | MsG0880046207.01 | 0.824414 | 8.175701e-54 | 7.236274e-51 |
| MsG0080048938.01 | MsG0880046207.01 | 0.848505 | 5.873588e-60 | 1.080347e-56 |
| MsG0180000008.01 | MsG0880046207.01 | 0.834153 | 3.533721e-56 | 4.157393e-53 |
| MsG0180000097.01 | MsG0880046207.01 | -0.858457 | 8.132291e-63 | 2.076874e-59 |
| MsG0180000160.01 | MsG0880046207.01 | 0.839224 | 1.801076e-57 | 2.471002e-54 |
| MsG0180000221.01 | MsG0880046207.01 | 0.843161 | 1.661378e-58 | 2.576433e-55 |
| MsG0180000599.01 | MsG0880046207.01 | 0.812046 | 5.161686e-51 | 3.247115e-48 |
| MsG0180000942.01 | MsG0880046207.01 | 0.812866 | 3.416814e-51 | 2.196969e-48 |
| MsG0180000977.01 | MsG0880046207.01 | 0.824346 | 8.485059e-54 | 7.495282e-51 |
| MsG0180001119.01 | MsG0880046207.01 | 0.819383 | 1.195517e-52 | 9.185174e-50 |
| MsG0880045285.01 | MsG0880046207.01 | 0.811579 | 6.523418e-51 | 4.053080e-48 |
| MsG0880045624.01 | MsG0880046207.01 | 0.837146 | 6.173278e-57 | 7.947318e-54 |
| MsG0880045771.01 | MsG0880046207.01 | 0.824622 | 7.307307e-54 | 6.507764e-51 |
| MsG0880045783.01 | MsG0880046207.01 | 0.848124 | 7.483732e-60 | 1.359341e-56 |
| MsG0880045992.01 | MsG0880046207.01 | 0.814216 | 1.724535e-51 | 1.150174e-48 |
| MsG0880046207.01 | MsG0880046268.01 | 0.864279 | 1.363503e-64 | 4.257439e-61 |
| MsG0880046207.01 | MsG0880047206.01 | 0.826987 | 2.006116e-54 | 1.911354e-51 |
| MsG0180003189.01 | MsG0880046207.01 | 0.822527 | 2.258287e-53 | 1.895091e-50 |
| MsG0180004025.01 | MsG0880046207.01 | 0.844502 | 7.264152e-59 | 1.175148e-55 |
| MsG0180004106.01 | MsG0880046207.01 | 0.827923 | 1.196250e-54 | 1.171279e-51 |
| MsG0180004112.01 | MsG0880046207.01 | 0.805436 | 1.336449e-49 | 7.070096e-47 |
| MsG0180005339.01 | MsG0880046207.01 | 0.829254 | 5.706640e-55 | 5.809768e-52 |
| MsG0180005457.01 | MsG0880046207.01 | 0.804629 | 1.970955e-49 | 1.021210e-46 |
| MsG0180005639.01 | MsG0880046207.01 | 0.811057 | 8.470419e-51 | 5.190959e-48 |
| MsG0180005829.01 | MsG0880046207.01 | 0.805543 | 1.268887e-49 | 6.731000e-47 |
| MsG0180005881.01 | MsG0880046207.01 | -0.815931 | 7.177617e-52 | 5.015780e-49 |
| MsG0180006054.01 | MsG0880046207.01 | 0.868890 | 4.665378e-66 | 1.715835e-62 |
| MsG0780040235.01 | MsG0880046207.01 | 0.805473 | 1.312291e-49 | 6.948975e-47 |
| MsG0780040559.01 | MsG0880046207.01 | -0.805141 | 1.540585e-49 | 8.088692e-47 |
| MsG0780041015.01 | MsG0880046207.01 | -0.835042 | 2.112757e-56 | 2.552965e-53 |
| MsG0780041080.01 | MsG0880046207.01 | 0.804591 | 2.007358e-49 | 1.039077e-46 |
| MsG0780041129.01 | MsG0880046207.01 | 0.814391 | 1.577979e-51 | 1.057528e-48 |
| MsG0780041191.01 | MsG0880046207.01 | 0.875479 | 2.983260e-68 | 1.394767e-64 |
| MsG0780041301.01 | MsG0880046207.01 | 0.872998 | 2.066449e-67 | 8.824192e-64 |
| MsG0880041852.01 | MsG0880046207.01 | 0.852582 | 4.200723e-61 | 8.817197e-58 |
| MsG0880042000.01 | MsG0880046207.01 | 0.844437 | 7.566505e-59 | 1.221432e-55 |
| MsG0880042086.01 | MsG0880046207.01 | 0.807339 | 5.305090e-50 | 2.947283e-47 |
| MsG0880042435.01 | MsG0880046207.01 | -0.814475 | 1.511615e-51 | 1.015352e-48 |
| MsG0880042622.01 | MsG0880046207.01 | 0.821669 | 3.570784e-53 | 2.923945e-50 |
| MsG0880042948.01 | MsG0880046207.01 | 0.883726 | 3.513842e-71 | 2.254782e-67 |
| MsG0880043107.01 | MsG0880046207.01 | 0.851918 | 6.490487e-61 | 1.333772e-57 |
| MsG0880043298.01 | MsG0880046207.01 | 0.838789 | 2.333323e-57 | 3.158905e-54 |
| MsG0880043829.01 | MsG0880046207.01 | 0.831678 | 1.456902e-55 | 1.592386e-52 |
| MsG0280010916.01 | MsG0880046207.01 | 0.813470 | 2.518097e-51 | 1.645947e-48 |
| MsG0380012567.01 | MsG0880046207.01 | 0.804627 | 1.972745e-49 | 1.022098e-46 |
| MsG0380013342.01 | MsG0880046207.01 | 0.820396 | 7.011828e-53 | 5.542005e-50 |
| MsG0380014517.01 | MsG0880046207.01 | 0.806918 | 6.512291e-50 | 3.578590e-47 |
| MsG0380014727.01 | MsG0880046207.01 | 0.826607 | 2.472354e-54 | 2.329681e-51 |
| MsG0680031377.01 | MsG0880046207.01 | -0.805744 | 1.151340e-49 | 6.139729e-47 |
| MsG0680031406.01 | MsG0880046207.01 | 0.809040 | 2.303309e-50 | 1.338005e-47 |
| MsG0680031562.01 | MsG0880046207.01 | 0.804819 | 1.799008e-49 | 9.368053e-47 |
| MsG0680031996.01 | MsG0880046207.01 | 0.832382 | 9.761165e-56 | 1.089177e-52 |
| MsG0680031998.01 | MsG0880046207.01 | 0.801614 | 8.286244e-49 | 3.974670e-46 |
| MsG0680034032.01 | MsG0880046207.01 | 0.833233 | 5.998656e-56 | 6.865823e-53 |
| MsG0680034402.01 | MsG0880046207.01 | 0.811840 | 5.723118e-51 | 3.580491e-48 |
| MsG0480019313.01 | MsG0880046207.01 | 0.827596 | 1.433423e-54 | 1.390061e-51 |
| MsG0480019384.01 | MsG0880046207.01 | 0.870385 | 1.519119e-66 | 5.897760e-63 |
| MsG0480019547.01 | MsG0880046207.01 | 0.800313 | 1.528079e-48 | 7.092973e-46 |
| MsG0480020322.01 | MsG0880046207.01 | 0.893990 | 3.754316e-75 | 3.662238e-71 |
| MsG0480020323.01 | MsG0880046207.01 | 0.888955 | 3.728262e-73 | 2.949718e-69 |
| MsG0480020433.01 | MsG0880046207.01 | 0.827742 | 1.322819e-54 | 1.288330e-51 |
| MsG0480021564.01 | MsG0880046207.01 | 0.856459 | 3.172436e-62 | 7.577771e-59 |
| MsG0480022066.01 | MsG0880046207.01 | 0.820875 | 5.444455e-53 | 4.360704e-50 |
| MsG0480022145.01 | MsG0880046207.01 | 0.825585 | 4.326330e-54 | 3.959865e-51 |
| MsG0480022330.01 | MsG0880046207.01 | 0.805303 | 1.424512e-49 | 7.510331e-47 |
| MsG0480022535.01 | MsG0880046207.01 | 0.870352 | 1.556664e-66 | 6.036044e-63 |
| MsG0480022802.01 | MsG0880046207.01 | 0.834399 | 3.066135e-56 | 3.634390e-53 |
| MsG0480022918.01 | MsG0880046207.01 | 0.847568 | 1.064803e-59 | 1.900572e-56 |
| MsG0480023251.01 | MsG0880046207.01 | 0.821158 | 4.684922e-53 | 3.781955e-50 |
| MsG0480023877.01 | MsG0880046207.01 | 0.817528 | 3.146775e-52 | 2.297280e-49 |
| MsG0580025226.01 | MsG0880046207.01 | 0.856903 | 2.347926e-62 | 5.691128e-59 |
| MsG0580025564.01 | MsG0880046207.01 | 0.825321 | 4.997284e-54 | 4.539976e-51 |
| MsG0580025644.01 | MsG0880046207.01 | 0.839285 | 1.736548e-57 | 2.386798e-54 |
| MsG0580025827.01 | MsG0880046207.01 | 0.887135 | 1.860825e-72 | 1.366828e-68 |
| MsG0580025832.01 | MsG0880046207.01 | 0.817171 | 3.787003e-52 | 2.737799e-49 |
| MsG0580026031.01 | MsG0880046207.01 | 0.817046 | 4.039748e-52 | 2.910644e-49 |
| MsG0580026032.01 | MsG0880046207.01 | 0.834962 | 2.212318e-56 | 2.667210e-53 |
| MsG0380015847.01 | MsG0880046207.01 | -0.820919 | 5.316978e-53 | 4.263883e-50 |
| MsG0380016182.01 | MsG0880046207.01 | 0.816048 | 6.760455e-52 | 4.739727e-49 |
| MsG0380016201.01 | MsG0880046207.01 | -0.801829 | 7.485388e-49 | 3.610354e-46 |
| MsG0380016285.01 | MsG0880046207.01 | 0.825860 | 3.722584e-54 | 3.434417e-51 |
| MsG0380016527.01 | MsG0880046207.01 | 0.815538 | 8.784222e-52 | 6.072968e-49 |
| MsG0380017066.01 | MsG0880046207.01 | 0.810053 | 1.395230e-50 | 8.325872e-48 |
| MsG0380017293.01 | MsG0880046207.01 | 0.804983 | 1.662460e-49 | 8.693163e-47 |
| MsG0380017931.01 | MsG0880046207.01 | 0.814558 | 1.449030e-51 | 9.754672e-49 |
| MsG0480018226.01 | MsG0880046207.01 | 0.844858 | 5.824785e-59 | 9.528694e-56 |
| MsG0480018236.01 | MsG0880046207.01 | 0.822110 | 2.823218e-53 | 2.340911e-50 |
| MsG0580026304.01 | MsG0880046207.01 | 0.803501 | 3.383264e-49 | 1.702959e-46 |
| MsG0580028118.01 | MsG0880046207.01 | -0.803574 | 3.266713e-49 | 1.647454e-46 |
| MsG0580029429.01 | MsG0880046207.01 | 0.804742 | 1.866504e-49 | 9.700355e-47 |
| MsG0580029799.01 | MsG0880046207.01 | 0.825841 | 3.761052e-54 | 3.468015e-51 |
| MsG0580030071.01 | MsG0880046207.01 | 0.802308 | 5.967642e-49 | 2.913734e-46 |
| MsG0680030680.01 | MsG0880046207.01 | 0.802797 | 4.731061e-49 | 2.338890e-46 |
| MsG0280006634.01 | MsG0880046207.01 | 0.804567 | 2.030262e-49 | 1.050281e-46 |
| MsG0280006669.01 | MsG0880046207.01 | 0.835620 | 1.508932e-56 | 1.855225e-53 |
| MsG0280007867.01 | MsG0880046207.01 | 0.808384 | 3.180348e-50 | 1.815968e-47 |
| MsG0280009435.01 | MsG0880046207.01 | 0.802230 | 6.192685e-49 | 3.017391e-46 |
| MsG0280009436.01 | MsG0880046207.01 | 0.809741 | 1.628958e-50 | 9.641806e-48 |
| MsG0280009757.01 | MsG0880046207.01 | 0.828857 | 7.121867e-55 | 7.164734e-52 |
| MsG0280010253.01 | MsG0880046207.01 | 0.811367 | 7.255552e-51 | 4.482658e-48 |
| MsG0680035707.01 | MsG0880046207.01 | 0.847007 | 1.518117e-59 | 2.661047e-56 |
| MsG0780036128.01 | MsG0880046207.01 | 0.812701 | 3.714180e-51 | 2.377972e-48 |
| MsG0780036509.01 | MsG0880046207.01 | 0.801850 | 7.413386e-49 | 3.577492e-46 |
| MsG0780036803.01 | MsG0880046207.01 | 0.821178 | 4.635420e-53 | 3.744189e-50 |
| MsG0780037052.01 | MsG0880046207.01 | -0.815023 | 1.143401e-51 | 7.794215e-49 |
| MsG0780037105.01 | MsG0880046207.01 | 0.847355 | 1.218461e-59 | 2.159906e-56 |
| MsG0780039435.01 | MsG0880046207.01 | 0.800752 | 1.243873e-48 | 5.837992e-46 |
| MsG0780039498.01 | MsG0880046207.01 | 0.812377 | 4.370904e-51 | 2.774538e-48 |
| MsG0780040177.01 | MsG0880046207.01 | 0.808523 | 2.970051e-50 | 1.702023e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880046207.01 | MsG0180005491.01 | PPI |
| MsG0780041603.01 | MsG0880046207.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046207.01.T01 | MTR_4g102770 | 95.105 | 286 | 14 | 0 | 1 | 286 | 1 | 286 | 0.0 | 551 |
| MsG0880046207.01.T01 | MTR_5g010800 | 73.519 | 287 | 71 | 3 | 1 | 286 | 1 | 283 | 5.40e-158 | 441 |
| MsG0880046207.01.T01 | MTR_0002s0020 | 60.498 | 281 | 104 | 2 | 1 | 274 | 1 | 281 | 8.98e-126 | 360 |
| MsG0880046207.01.T01 | MTR_1g101390 | 62.308 | 260 | 97 | 1 | 19 | 278 | 28 | 286 | 5.96e-121 | 348 |
| MsG0880046207.01.T01 | MTR_0113s0040 | 58.303 | 271 | 111 | 2 | 13 | 282 | 16 | 285 | 8.51e-117 | 337 |
| MsG0880046207.01.T01 | MTR_7g103380 | 55.326 | 291 | 118 | 2 | 1 | 280 | 1 | 290 | 1.02e-112 | 327 |
| MsG0880046207.01.T01 | MTR_7g112560 | 27.007 | 274 | 167 | 7 | 22 | 278 | 4 | 261 | 6.05e-29 | 111 |
| MsG0880046207.01.T01 | MTR_4g023570 | 27.519 | 258 | 164 | 5 | 22 | 277 | 4 | 240 | 2.80e-27 | 106 |
| MsG0880046207.01.T01 | MTR_1g083580 | 26.207 | 290 | 164 | 9 | 18 | 273 | 7 | 280 | 2.31e-22 | 94.4 |
| MsG0880046207.01.T01 | MTR_7g112550 | 25.714 | 280 | 181 | 5 | 18 | 273 | 6 | 282 | 1.17e-21 | 92.4 |
| MsG0880046207.01.T01 | MTR_1g079180 | 36.111 | 144 | 91 | 1 | 21 | 163 | 6 | 149 | 3.27e-21 | 90.9 |
| MsG0880046207.01.T01 | MTR_1g079460 | 28.464 | 267 | 174 | 6 | 21 | 275 | 6 | 267 | 4.99e-21 | 90.5 |
| MsG0880046207.01.T01 | MTR_1g079260 | 36.806 | 144 | 87 | 2 | 21 | 163 | 6 | 146 | 6.69e-21 | 90.1 |
| MsG0880046207.01.T01 | MTR_1g079230 | 36.111 | 144 | 88 | 2 | 21 | 163 | 6 | 146 | 5.13e-20 | 87.8 |
| MsG0880046207.01.T01 | MTR_1g079370 | 34.932 | 146 | 91 | 2 | 19 | 163 | 4 | 146 | 3.31e-19 | 85.1 |
| MsG0880046207.01.T01 | MTR_1g079380 | 28.571 | 287 | 173 | 8 | 19 | 286 | 4 | 277 | 1.83e-18 | 84.0 |
| MsG0880046207.01.T01 | MTR_1g100613 | 36.923 | 130 | 78 | 2 | 36 | 164 | 6 | 132 | 2.20e-18 | 82.8 |
| MsG0880046207.01.T01 | MTR_1g079140 | 36.735 | 147 | 87 | 3 | 21 | 163 | 15 | 159 | 2.61e-18 | 83.6 |
| MsG0880046207.01.T01 | MTR_1g100597 | 34.028 | 144 | 91 | 2 | 21 | 163 | 6 | 146 | 9.03e-18 | 81.6 |
| MsG0880046207.01.T01 | MTR_1g079410 | 33.333 | 150 | 98 | 2 | 16 | 163 | 5 | 154 | 1.56e-17 | 80.9 |
| MsG0880046207.01.T01 | MTR_1g079200 | 34.247 | 146 | 91 | 3 | 21 | 165 | 6 | 147 | 1.65e-17 | 80.5 |
| MsG0880046207.01.T01 | MTR_3g452600 | 33.557 | 149 | 89 | 5 | 19 | 164 | 10 | 151 | 1.40e-15 | 75.5 |
| MsG0880046207.01.T01 | MTR_1g079400 | 32.639 | 144 | 95 | 2 | 22 | 163 | 15 | 158 | 8.95e-15 | 73.2 |
| MsG0880046207.01.T01 | MTR_1g079850 | 33.333 | 147 | 92 | 3 | 21 | 163 | 6 | 150 | 1.44e-14 | 72.8 |
| MsG0880046207.01.T01 | MTR_1g079250 | 34.014 | 147 | 90 | 3 | 21 | 163 | 6 | 149 | 1.70e-13 | 69.7 |
| MsG0880046207.01.T01 | MTR_3g450990 | 33.577 | 137 | 79 | 6 | 19 | 152 | 10 | 137 | 2.31e-12 | 66.2 |
| MsG0880046207.01.T01 | MTR_1g079350 | 27.317 | 205 | 128 | 5 | 21 | 219 | 6 | 195 | 6.80e-12 | 64.7 |
| MsG0880046207.01.T01 | MTR_3g006850 | 27.907 | 172 | 105 | 4 | 7 | 163 | 5 | 172 | 2.54e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046207.01.T01 | AT1G12710 | 67.658 | 269 | 83 | 3 | 16 | 282 | 25 | 291 | 1.31e-134 | 382 |
| MsG0880046207.01.T01 | AT3G61060 | 62.406 | 266 | 98 | 2 | 14 | 278 | 20 | 284 | 1.30e-126 | 362 |
| MsG0880046207.01.T01 | AT1G12710 | 58.521 | 311 | 83 | 4 | 16 | 282 | 25 | 333 | 9.56e-126 | 362 |
| MsG0880046207.01.T01 | AT3G61060 | 62.172 | 267 | 98 | 3 | 14 | 278 | 20 | 285 | 7.56e-125 | 358 |
| MsG0880046207.01.T01 | AT1G63090 | 65.769 | 260 | 86 | 2 | 16 | 274 | 23 | 280 | 1.36e-122 | 352 |
| MsG0880046207.01.T01 | AT5G52120 | 51.812 | 276 | 128 | 1 | 7 | 277 | 9 | 284 | 1.28e-103 | 304 |
| MsG0880046207.01.T01 | AT3G53000 | 53.731 | 268 | 111 | 3 | 17 | 273 | 19 | 284 | 2.46e-99 | 293 |
| MsG0880046207.01.T01 | AT2G02360 | 36.774 | 155 | 84 | 4 | 10 | 161 | 8 | 151 | 2.25e-25 | 102 |
| MsG0880046207.01.T01 | AT2G02340 | 30.857 | 175 | 114 | 3 | 5 | 176 | 22 | 192 | 2.20e-22 | 94.7 |
| MsG0880046207.01.T01 | AT2G02230 | 34.965 | 143 | 86 | 2 | 22 | 163 | 35 | 171 | 2.13e-21 | 92.4 |
| MsG0880046207.01.T01 | AT1G09155 | 25.088 | 283 | 183 | 6 | 22 | 277 | 3 | 283 | 1.33e-20 | 89.7 |
| MsG0880046207.01.T01 | AT2G02240 | 35.211 | 142 | 85 | 3 | 22 | 162 | 64 | 199 | 2.12e-20 | 89.7 |
| MsG0880046207.01.T01 | AT5G24560 | 28.966 | 145 | 96 | 2 | 21 | 164 | 5 | 143 | 2.95e-18 | 81.3 |
| MsG0880046207.01.T01 | AT2G02350 | 32.215 | 149 | 85 | 5 | 18 | 160 | 23 | 161 | 3.73e-18 | 82.8 |
| MsG0880046207.01.T01 | AT2G02250 | 28.223 | 287 | 164 | 12 | 17 | 283 | 44 | 308 | 3.98e-18 | 83.2 |
| MsG0880046207.01.T01 | AT2G02310 | 26.022 | 269 | 175 | 8 | 21 | 275 | 47 | 305 | 1.81e-17 | 81.3 |
| MsG0880046207.01.T01 | AT1G80110 | 24.528 | 265 | 180 | 8 | 19 | 273 | 1 | 255 | 1.86e-17 | 80.5 |
| MsG0880046207.01.T01 | AT1G56240 | 26.429 | 280 | 175 | 7 | 22 | 273 | 4 | 280 | 3.76e-16 | 77.0 |
| MsG0880046207.01.T01 | AT1G56250 | 24.573 | 293 | 164 | 6 | 22 | 273 | 4 | 280 | 6.00e-16 | 76.6 |
| MsG0880046207.01.T01 | AT2G02300 | 26.354 | 277 | 162 | 9 | 18 | 277 | 33 | 284 | 1.42e-14 | 72.8 |
| MsG0880046207.01.T01 | AT2G02320 | 25.085 | 295 | 180 | 12 | 4 | 275 | 24 | 300 | 3.94e-14 | 71.6 |
Find 74 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAACAGCTACACAGCTTTC+TGG | 0.183101 | 8:+70562902 | None:intergenic |
| TTATTCTTCCGAATACATTT+AGG | 0.199539 | 8:-70561598 | MsG0880046207.01.T01:CDS |
| GATAATTTGTTTAATTAGTA+TGG | 0.212453 | 8:-70561075 | MsG0880046207.01.T01:three_prime_UTR |
| TTGAGCTGAGTTAAGGTTAA+TGG | 0.240519 | 8:-70562987 | MsG0880046207.01.T01:exon |
| TTGATTCTTCAGTGGGAATA+TGG | 0.245615 | 8:+70562483 | None:intergenic |
| ATCATAATTAGAGGGAAGTT+TGG | 0.273067 | 8:+70562787 | None:intergenic |
| GCTAAAGGGTTGTCAATAAC+TGG | 0.296742 | 8:-70562530 | MsG0880046207.01.T01:CDS |
| CTTCAAACCACCAGATTTGT+TGG | 0.309545 | 8:+70561665 | None:intergenic |
| AATTCTCCTAAACTTGGTTT+TGG | 0.321554 | 8:+70562926 | None:intergenic |
| TATTCTTCCGAATACATTTA+GGG | 0.326850 | 8:-70561597 | MsG0880046207.01.T01:CDS |
| TATTATTATTGTAGAAAGTT+TGG | 0.336627 | 8:-70562592 | MsG0880046207.01.T01:intron |
| GGGAAACCCGCCAAGAGATT+TGG | 0.340849 | 8:-70561577 | MsG0880046207.01.T01:CDS |
| CTATATGTTCCTGCTGGAAA+TGG | 0.353545 | 8:+70561622 | None:intergenic |
| CGGGTTTCCCTAAATGTATT+CGG | 0.356289 | 8:+70561590 | None:intergenic |
| TGAGCTGAGTTAAGGTTAAT+GGG | 0.368335 | 8:-70562986 | MsG0880046207.01.T01:exon |
| AATTATAACATCATAATTAG+AGG | 0.373488 | 8:+70562778 | None:intergenic |
| GTCCATAGTTGGAATCTAAC+AGG | 0.395466 | 8:+70561508 | None:intergenic |
| AAGCTGTGTAGCTGTTATAA+TGG | 0.396206 | 8:-70562897 | MsG0880046207.01.T01:CDS |
| TCATCACCAAAACCAAGTTT+AGG | 0.402083 | 8:-70562932 | MsG0880046207.01.T01:CDS |
| TTGCGTATCTCCAACAAATC+TGG | 0.415817 | 8:-70561675 | MsG0880046207.01.T01:CDS |
| GTTTGAATTGAGCTGAGTTA+AGG | 0.418209 | 8:-70562994 | MsG0880046207.01.T01:five_prime_UTR |
| GTTTGTCTCTATCGGCTAAA+GGG | 0.418481 | 8:-70562544 | MsG0880046207.01.T01:CDS |
| AGCCTGTTAGATTCCAACTA+TGG | 0.436078 | 8:-70561510 | MsG0880046207.01.T01:CDS |
| TGTTTGTCTCTATCGGCTAA+AGG | 0.439169 | 8:-70562545 | MsG0880046207.01.T01:CDS |
| TGGTAATAGCGCCATTTACC+TGG | 0.441087 | 8:+70561442 | None:intergenic |
| TGCAACACAGAACATGTTCA+TGG | 0.443142 | 8:-70561544 | MsG0880046207.01.T01:CDS |
| GGATTGATGATCGAAGATAT+TGG | 0.446080 | 8:-70562508 | MsG0880046207.01.T01:CDS |
| CCGCCAAGAGATTTGGAAGA+AGG | 0.447038 | 8:-70561570 | MsG0880046207.01.T01:CDS |
| AGCTGTTATAATGGAATACT+TGG | 0.448318 | 8:-70562888 | MsG0880046207.01.T01:CDS |
| AACCCTTCTTCCAAATCTCT+TGG | 0.453456 | 8:+70561567 | None:intergenic |
| CCTTCTCATTTGGGGAAAAG+AGG | 0.454751 | 8:-70562728 | MsG0880046207.01.T01:CDS |
| AGCTTCAATACTTTCGATGA+AGG | 0.456690 | 8:-70562686 | MsG0880046207.01.T01:CDS |
| CTATGCATGTATCAAAGATT+AGG | 0.458711 | 8:-70561230 | MsG0880046207.01.T01:three_prime_UTR |
| CCTTCTTCCAAATCTCTTGG+CGG | 0.463503 | 8:+70561570 | None:intergenic |
| TCTGGTAATTCTCCTAAACT+TGG | 0.464696 | 8:+70562920 | None:intergenic |
| CACAGAACATGTTCATGGTT+GGG | 0.465386 | 8:-70561539 | MsG0880046207.01.T01:CDS |
| TATATGTTCCTGCTGGAAAT+GGG | 0.468372 | 8:+70561623 | None:intergenic |
| TGTTCTATCATAATCTTGTA+TGG | 0.469913 | 8:-70561050 | MsG0880046207.01.T01:three_prime_UTR |
| CGCCAAGAGATTTGGAAGAA+GGG | 0.472287 | 8:-70561569 | MsG0880046207.01.T01:CDS |
| CTTCTTCCAAATCTCTTGGC+GGG | 0.472849 | 8:+70561571 | None:intergenic |
| TCAGCTCAATTCAAACAACT+TGG | 0.487550 | 8:+70563001 | None:intergenic |
| CTTCTCATTTGGGGAAAAGA+GGG | 0.492520 | 8:-70562727 | MsG0880046207.01.T01:CDS |
| TAAAGTGTGTTTGTCTCTAT+CGG | 0.499327 | 8:-70562552 | MsG0880046207.01.T01:CDS |
| AATAAGCTATATGTTCCTGC+TGG | 0.503889 | 8:+70561616 | None:intergenic |
| AGTTTGGTTGGATAGAAGCA+TGG | 0.503977 | 8:-70562576 | MsG0880046207.01.T01:CDS |
| GAGAAATTATTAATTCCATC+CGG | 0.504848 | 8:+70561005 | None:intergenic |
| ATTATTGTAGAAAGTTTGGT+TGG | 0.506585 | 8:-70562588 | MsG0880046207.01.T01:intron |
| TTTGAACTACTCTTAACCTA+AGG | 0.508950 | 8:-70561272 | MsG0880046207.01.T01:exon |
| TCTTACCTTGATTCTTCAGT+GGG | 0.519553 | 8:+70562476 | None:intergenic |
| ACACAGAACATGTTCATGGT+TGG | 0.524349 | 8:-70561540 | MsG0880046207.01.T01:CDS |
| GTATCCTAGTGAGTTTAGAA+AGG | 0.524884 | 8:-70561305 | MsG0880046207.01.T01:CDS |
| GATCATCTGAAGTCCATAGT+TGG | 0.529126 | 8:+70561497 | None:intergenic |
| CAGCTCAATTCAAACAACTT+GGG | 0.533271 | 8:+70563002 | None:intergenic |
| ATTGAGTTCCCATTTCCAGC+AGG | 0.540368 | 8:-70561631 | MsG0880046207.01.T01:CDS |
| GTTTGGTTGGATAGAAGCAT+GGG | 0.542266 | 8:-70562575 | MsG0880046207.01.T01:CDS |
| ATTGATTGCACACACACTAA+AGG | 0.551213 | 8:-70561355 | MsG0880046207.01.T01:CDS |
| TTAACCTTTCTAAACTCACT+AGG | 0.563266 | 8:+70561301 | None:intergenic |
| ATCTTACCTTGATTCTTCAG+TGG | 0.563619 | 8:+70562475 | None:intergenic |
| ACAAATCTGGTGGTTTGAAG+TGG | 0.565964 | 8:-70561662 | MsG0880046207.01.T01:CDS |
| ATCTTCAACCACAAAATCGC+CGG | 0.570051 | 8:+70561417 | None:intergenic |
| CTAAAGGGTTGTCAATAACT+GGG | 0.571485 | 8:-70562529 | MsG0880046207.01.T01:CDS |
| ATATTCCCACTGAAGAATCA+AGG | 0.574725 | 8:-70562481 | MsG0880046207.01.T01:intron |
| AGAATATTGTATACTTGTGC+CGG | 0.575065 | 8:-70561024 | MsG0880046207.01.T01:three_prime_UTR |
| ATTATAACATCATAATTAGA+GGG | 0.581280 | 8:+70562779 | None:intergenic |
| CAACCACAAAATCGCCGGCA+TGG | 0.585784 | 8:+70561422 | None:intergenic |
| GAAGCTAATTTGCAAATCTG+AGG | 0.595553 | 8:+70562860 | None:intergenic |
| TATTGTATACTTGTGCCGGA+TGG | 0.601880 | 8:-70561020 | MsG0880046207.01.T01:three_prime_UTR |
| CGTATCTCCAACAAATCTGG+TGG | 0.613155 | 8:-70561672 | MsG0880046207.01.T01:CDS |
| GCTAATTTGCAAATCTGAGG+AGG | 0.616624 | 8:+70562863 | None:intergenic |
| AAATGGCGCTATTACCATGC+CGG | 0.633820 | 8:-70561436 | MsG0880046207.01.T01:CDS |
| TACTTTCGATGAAGGAACCA+AGG | 0.641635 | 8:-70562678 | MsG0880046207.01.T01:intron |
| GATTGCACACACACTAAAGG+TGG | 0.653493 | 8:-70561352 | MsG0880046207.01.T01:CDS |
| AAGAAGCACCATGAAAAGCA+CGG | 0.655921 | 8:+70562831 | None:intergenic |
| ATCTGGTGGTTTGAAGTGGA+CGG | 0.666571 | 8:-70561658 | MsG0880046207.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAAAATTAATTAAAAG+AGG | + | Chr8:70561861-70561880 | None:intergenic | 10.0% |
| !!! | TATATTTTTATTTTTACCTT+AGG | + | Chr8:70562759-70562778 | None:intergenic | 10.0% |
| !! | AATTATAACATCATAATTAG+AGG | + | Chr8:70561237-70561256 | None:intergenic | 15.0% |
| !! | ATAATTCAAAAAATCTTTGA+TGG | - | Chr8:70561251-70561270 | MsG0880046207.01.T01:three_prime_UTR | 15.0% |
| !! | ATTATAACATCATAATTAGA+GGG | + | Chr8:70561236-70561255 | None:intergenic | 15.0% |
| !! | TATTATTATTGTAGAAAGTT+TGG | - | Chr8:70561420-70561439 | MsG0880046207.01.T01:CDS | 15.0% |
| !!! | GATAATTTGTTTAATTAGTA+TGG | - | Chr8:70562937-70562956 | MsG0880046207.01.T01:CDS | 15.0% |
| !!! | TTGAATTGATTTTATTGATT+TGG | - | Chr8:70561733-70561752 | MsG0880046207.01.T01:intron | 15.0% |
| !!! | TTGATTTTCTTTTATTATTC+TGG | - | Chr8:70562134-70562153 | MsG0880046207.01.T01:intron | 15.0% |
| !! | GAAATTAAAAAGACATAACT+TGG | + | Chr8:70562216-70562235 | None:intergenic | 20.0% |
| !!! | AAAAAAAATAGGGTTCTTTT+AGG | - | Chr8:70562859-70562878 | MsG0880046207.01.T01:CDS | 20.0% |
| !!! | TTAGTTTGGAAATAAAGTTT+CGG | - | Chr8:70562271-70562290 | MsG0880046207.01.T01:intron | 20.0% |
| !!! | TTATAGGTAGAATTGATTTT+GGG | - | Chr8:70561917-70561936 | MsG0880046207.01.T01:intron | 20.0% |
| !!! | TTTATGTTAATTTGTTACCT+TGG | + | Chr8:70561354-70561373 | None:intergenic | 20.0% |
| ! | AAAATTATGCTTGGAGAATT+TGG | - | Chr8:70561807-70561826 | MsG0880046207.01.T01:intron | 25.0% |
| ! | ATTATTGTAGAAAGTTTGGT+TGG | - | Chr8:70561424-70561443 | MsG0880046207.01.T01:CDS | 25.0% |
| ! | GAGAAATTATTAATTCCATC+CGG | + | Chr8:70563010-70563029 | None:intergenic | 25.0% |
| ! | GCAAATGATAAAGATAACAT+TGG | + | Chr8:70562304-70562323 | None:intergenic | 25.0% |
| ! | TATTCTTCCGAATACATTTA+GGG | - | Chr8:70562415-70562434 | MsG0880046207.01.T01:intron | 25.0% |
| ! | TGTTCTATCATAATCTTGTA+TGG | - | Chr8:70562962-70562981 | MsG0880046207.01.T01:CDS | 25.0% |
| ! | TTATTCTTCCGAATACATTT+AGG | - | Chr8:70562414-70562433 | MsG0880046207.01.T01:intron | 25.0% |
| ! | TTTACGGAAAAAATTATGCT+TGG | - | Chr8:70561798-70561817 | MsG0880046207.01.T01:intron | 25.0% |
| ! | TTTATGTTTGCATGCATTTA+CGG | - | Chr8:70561782-70561801 | MsG0880046207.01.T01:intron | 25.0% |
| !! | CTATTAGTGTTGAATTAGTT+TGG | - | Chr8:70562257-70562276 | MsG0880046207.01.T01:intron | 25.0% |
| !! | TAGAATTTTGTAGAATCCAA+GGG | - | Chr8:70562884-70562903 | MsG0880046207.01.T01:CDS | 25.0% |
| !! | TTAGAATTTTGTAGAATCCA+AGG | - | Chr8:70562883-70562902 | MsG0880046207.01.T01:CDS | 25.0% |
| !! | TTTCATGTTCTAGTGTATTT+TGG | - | Chr8:70561655-70561674 | MsG0880046207.01.T01:CDS | 25.0% |
| !!! | AAAATCGTTGCTTTTGTATA+TGG | - | Chr8:70561372-70561391 | MsG0880046207.01.T01:CDS | 25.0% |
| !!! | CTTATAGGTAGAATTGATTT+TGG | - | Chr8:70561916-70561935 | MsG0880046207.01.T01:intron | 25.0% |
| !!! | GTATTGATTCTTTGTTAACT+CGG | - | Chr8:70561877-70561896 | MsG0880046207.01.T01:intron | 25.0% |
| !!! | TATAGGTAGAATTGATTTTG+GGG | - | Chr8:70561918-70561937 | MsG0880046207.01.T01:intron | 25.0% |
| AAAGCTAAGTATTTGACCTT+TGG | + | Chr8:70562063-70562082 | None:intergenic | 30.0% | |
| AGAATATTGTATACTTGTGC+CGG | - | Chr8:70562988-70563007 | MsG0880046207.01.T01:exon | 30.0% | |
| AGCTAGAAATGATAGCTTAT+AGG | - | Chr8:70561901-70561920 | MsG0880046207.01.T01:intron | 30.0% | |
| ATCATAATTAGAGGGAAGTT+TGG | + | Chr8:70561228-70561247 | None:intergenic | 30.0% | |
| CTATGCATGTATCAAAGATT+AGG | - | Chr8:70562782-70562801 | MsG0880046207.01.T01:CDS | 30.0% | |
| GAAGAGAAAGATATTGATGA+AGG | - | Chr8:70562105-70562124 | MsG0880046207.01.T01:intron | 30.0% | |
| GACAGCAAATATGTTATGTT+TGG | + | Chr8:70561969-70561988 | None:intergenic | 30.0% | |
| TAAAGTGTGTTTGTCTCTAT+CGG | - | Chr8:70561460-70561479 | MsG0880046207.01.T01:CDS | 30.0% | |
| TGTGAACTATGAAGTTCAAA+GGG | - | Chr8:70561597-70561616 | MsG0880046207.01.T01:CDS | 30.0% | |
| TTAACCTTTCTAAACTCACT+AGG | + | Chr8:70562714-70562733 | None:intergenic | 30.0% | |
| TTTGAACTACTCTTAACCTA+AGG | - | Chr8:70562740-70562759 | MsG0880046207.01.T01:CDS | 30.0% | |
| ! | AATTCTCCTAAACTTGGTTT+TGG | + | Chr8:70561089-70561108 | None:intergenic | 30.0% |
| ! | AGAATTTTGTAGAATCCAAG+GGG | - | Chr8:70562885-70562904 | MsG0880046207.01.T01:CDS | 30.0% |
| ! | AGAGAATCGAGTTTTCAATA+GGG | - | Chr8:70562810-70562829 | MsG0880046207.01.T01:CDS | 30.0% |
| ! | AGCTGTTATAATGGAATACT+TGG | - | Chr8:70561124-70561143 | MsG0880046207.01.T01:three_prime_UTR | 30.0% |
| ! | GTTTTCAATAGGGTTCTTTT+AGG | - | Chr8:70562820-70562839 | MsG0880046207.01.T01:CDS | 30.0% |
| ! | TAACCAAAACTGATTCTAAG+AGG | - | Chr8:70562002-70562021 | MsG0880046207.01.T01:intron | 30.0% |
| ! | TCTTCTTTTCCTTCTCATTT+GGG | - | Chr8:70561275-70561294 | MsG0880046207.01.T01:exon | 30.0% |
| ! | TTCTTCTTTTCCTTCTCATT+TGG | - | Chr8:70561274-70561293 | MsG0880046207.01.T01:exon | 30.0% |
| !! | TTCTTTGGCTGATTTTGTTT+GGG | - | Chr8:70561199-70561218 | MsG0880046207.01.T01:three_prime_UTR | 30.0% |
| !!! | ATCCATTTTTTCCCATGTTT+AGG | - | Chr8:70562036-70562055 | MsG0880046207.01.T01:intron | 30.0% |
| !!! | GAAACTAGACTTGCTAATTT+TGG | + | Chr8:70562238-70562257 | None:intergenic | 30.0% |
| !!! | TCATCGCAATGTTTTTTGAA+AGG | - | Chr8:70562546-70562565 | MsG0880046207.01.T01:CDS | 30.0% |
| !!! | TTTTGGTGATGATGATGATT+GGG | + | Chr8:70561072-70561091 | None:intergenic | 30.0% |
| AAGCTGTGTAGCTGTTATAA+TGG | - | Chr8:70561115-70561134 | MsG0880046207.01.T01:three_prime_UTR | 35.0% | |
| AATAAGCTATATGTTCCTGC+TGG | + | Chr8:70562399-70562418 | None:intergenic | 35.0% | |
| AGCTTCAATACTTTCGATGA+AGG | - | Chr8:70561326-70561345 | MsG0880046207.01.T01:CDS | 35.0% | |
| ATATTCCCACTGAAGAATCA+AGG | - | Chr8:70561531-70561550 | MsG0880046207.01.T01:CDS | 35.0% | |
| ATCTTACCTTGATTCTTCAG+TGG | + | Chr8:70561540-70561559 | None:intergenic | 35.0% | |
| ATTGATTGCACACACACTAA+AGG | - | Chr8:70562657-70562676 | MsG0880046207.01.T01:intron | 35.0% | |
| CAGCTCAATTCAAACAACTT+GGG | + | Chr8:70561013-70561032 | None:intergenic | 35.0% | |
| CTAAAGGGTTGTCAATAACT+GGG | - | Chr8:70561483-70561502 | MsG0880046207.01.T01:CDS | 35.0% | |
| GACCTAAACATGGGAAAAAA+TGG | + | Chr8:70562041-70562060 | None:intergenic | 35.0% | |
| GTATCCTAGTGAGTTTAGAA+AGG | - | Chr8:70562707-70562726 | MsG0880046207.01.T01:CDS | 35.0% | |
| GTGAACTATGAAGTTCAAAG+GGG | - | Chr8:70561598-70561617 | MsG0880046207.01.T01:CDS | 35.0% | |
| GTGTGAACTATGAAGTTCAA+AGG | - | Chr8:70561596-70561615 | MsG0880046207.01.T01:CDS | 35.0% | |
| GTTTGAATTGAGCTGAGTTA+AGG | - | Chr8:70561018-70561037 | MsG0880046207.01.T01:three_prime_UTR | 35.0% | |
| TATATGTTCCTGCTGGAAAT+GGG | + | Chr8:70562392-70562411 | None:intergenic | 35.0% | |
| TCAGCTCAATTCAAACAACT+TGG | + | Chr8:70561014-70561033 | None:intergenic | 35.0% | |
| TCATCACCAAAACCAAGTTT+AGG | - | Chr8:70561080-70561099 | MsG0880046207.01.T01:three_prime_UTR | 35.0% | |
| TCTGGTAATTCTCCTAAACT+TGG | + | Chr8:70561095-70561114 | None:intergenic | 35.0% | |
| TCTTACCTTGATTCTTCAGT+GGG | + | Chr8:70561539-70561558 | None:intergenic | 35.0% | |
| TGAGCTGAGTTAAGGTTAAT+GGG | - | Chr8:70561026-70561045 | MsG0880046207.01.T01:three_prime_UTR | 35.0% | |
| TTGAGCTGAGTTAAGGTTAA+TGG | - | Chr8:70561025-70561044 | MsG0880046207.01.T01:three_prime_UTR | 35.0% | |
| TTGATTCTTCAGTGGGAATA+TGG | + | Chr8:70561532-70561551 | None:intergenic | 35.0% | |
| ! | AAATTCTGTTGGCGATTTTC+GGG | - | Chr8:70561684-70561703 | MsG0880046207.01.T01:CDS | 35.0% |
| ! | AATTTTGTAGAATCCAAGGG+GGG | - | Chr8:70562887-70562906 | MsG0880046207.01.T01:CDS | 35.0% |
| ! | CAGAGAATCGAGTTTTCAAT+AGG | - | Chr8:70562809-70562828 | MsG0880046207.01.T01:CDS | 35.0% |
| ! | CTTCTTTTCCTTCTCATTTG+GGG | - | Chr8:70561276-70561295 | MsG0880046207.01.T01:exon | 35.0% |
| ! | GAAATTCTGTTGGCGATTTT+CGG | - | Chr8:70561683-70561702 | MsG0880046207.01.T01:CDS | 35.0% |
| ! | GAAGCTAATTTGCAAATCTG+AGG | + | Chr8:70561155-70561174 | None:intergenic | 35.0% |
| ! | GAATTTTGTAGAATCCAAGG+GGG | - | Chr8:70562886-70562905 | MsG0880046207.01.T01:CDS | 35.0% |
| ! | GGATTGATGATCGAAGATAT+TGG | - | Chr8:70561504-70561523 | MsG0880046207.01.T01:CDS | 35.0% |
| !! | CTTCTTTGGCTGATTTTGTT+TGG | - | Chr8:70561198-70561217 | MsG0880046207.01.T01:three_prime_UTR | 35.0% |
| !! | TTTGGTCTTGGAAATTCTGT+TGG | - | Chr8:70561673-70561692 | MsG0880046207.01.T01:CDS | 35.0% |
| !! | TTTTGAAAGGTCCAGGTAAA+TGG | - | Chr8:70562559-70562578 | MsG0880046207.01.T01:CDS | 35.0% |
| !!! | CAATGTTTTTTGAAAGGTCC+AGG | - | Chr8:70562552-70562571 | MsG0880046207.01.T01:CDS | 35.0% |
| !!! | GTTCTAGTGTATTTTGGTCT+TGG | - | Chr8:70561661-70561680 | MsG0880046207.01.T01:CDS | 35.0% |
| !!! | GTTTTGGTGATGATGATGAT+TGG | + | Chr8:70561073-70561092 | None:intergenic | 35.0% |
| AACCCTTCTTCCAAATCTCT+TGG | + | Chr8:70562448-70562467 | None:intergenic | 40.0% | |
| ACAAATCTGGTGGTTTGAAG+TGG | - | Chr8:70562350-70562369 | MsG0880046207.01.T01:intron | 40.0% | |
| ACACAGAACATGTTCATGGT+TGG | - | Chr8:70562472-70562491 | MsG0880046207.01.T01:intron | 40.0% | |
| AGCCTGTTAGATTCCAACTA+TGG | - | Chr8:70562502-70562521 | MsG0880046207.01.T01:CDS | 40.0% | |
| AGTTTGGTTGGATAGAAGCA+TGG | - | Chr8:70561436-70561455 | MsG0880046207.01.T01:CDS | 40.0% | |
| ATAACAGCTACACAGCTTTC+TGG | + | Chr8:70561113-70561132 | None:intergenic | 40.0% | |
| ATCTTCAACCACAAAATCGC+CGG | + | Chr8:70562598-70562617 | None:intergenic | 40.0% | |
| CACAGAACATGTTCATGGTT+GGG | - | Chr8:70562473-70562492 | MsG0880046207.01.T01:intron | 40.0% | |
| CGGGTTTCCCTAAATGTATT+CGG | + | Chr8:70562425-70562444 | None:intergenic | 40.0% | |
| CTATATGTTCCTGCTGGAAA+TGG | + | Chr8:70562393-70562412 | None:intergenic | 40.0% | |
| CTTCAAACCACCAGATTTGT+TGG | + | Chr8:70562350-70562369 | None:intergenic | 40.0% | |
| CTTCTCATTTGGGGAAAAGA+GGG | - | Chr8:70561285-70561304 | MsG0880046207.01.T01:CDS | 40.0% | |
| GCTAAAGGGTTGTCAATAAC+TGG | - | Chr8:70561482-70561501 | MsG0880046207.01.T01:CDS | 40.0% | |
| GGAAAAAATGGATCCACCTT+TGG | + | Chr8:70562029-70562048 | None:intergenic | 40.0% | |
| GTCCATAGTTGGAATCTAAC+AGG | + | Chr8:70562507-70562526 | None:intergenic | 40.0% | |
| TACTTTCGATGAAGGAACCA+AGG | - | Chr8:70561334-70561353 | MsG0880046207.01.T01:CDS | 40.0% | |
| TATTGTATACTTGTGCCGGA+TGG | - | Chr8:70562992-70563011 | MsG0880046207.01.T01:five_prime_UTR | 40.0% | |
| TGACCTTTGGACCTAAACAT+GGG | + | Chr8:70562050-70562069 | None:intergenic | 40.0% | |
| TGCAACACAGAACATGTTCA+TGG | - | Chr8:70562468-70562487 | MsG0880046207.01.T01:intron | 40.0% | |
| TTGACCTTTGGACCTAAACA+TGG | + | Chr8:70562051-70562070 | None:intergenic | 40.0% | |
| TTGCGTATCTCCAACAAATC+TGG | - | Chr8:70562337-70562356 | MsG0880046207.01.T01:intron | 40.0% | |
| TTTCCCATGTTTAGGTCCAA+AGG | - | Chr8:70562044-70562063 | MsG0880046207.01.T01:intron | 40.0% | |
| ! | ACTGATTCTAAGAGGTCCAA+AGG | - | Chr8:70562010-70562029 | MsG0880046207.01.T01:intron | 40.0% |
| ! | ATTTTGTAGAATCCAAGGGG+GGG | - | Chr8:70562888-70562907 | MsG0880046207.01.T01:CDS | 40.0% |
| ! | GATCATCTGAAGTCCATAGT+TGG | + | Chr8:70562518-70562537 | None:intergenic | 40.0% |
| ! | GCTAATTTGCAAATCTGAGG+AGG | + | Chr8:70561152-70561171 | None:intergenic | 40.0% |
| ! | GGACCTCTTAGAATCAGTTT+TGG | + | Chr8:70562008-70562027 | None:intergenic | 40.0% |
| ! | GTTTGGTTGGATAGAAGCAT+GGG | - | Chr8:70561437-70561456 | MsG0880046207.01.T01:CDS | 40.0% |
| ! | GTTTGTCTCTATCGGCTAAA+GGG | - | Chr8:70561468-70561487 | MsG0880046207.01.T01:CDS | 40.0% |
| ! | TGCTTTTCATGGTGCTTCTT+TGG | - | Chr8:70561184-70561203 | MsG0880046207.01.T01:three_prime_UTR | 40.0% |
| ! | TGTTTGTCTCTATCGGCTAA+AGG | - | Chr8:70561467-70561486 | MsG0880046207.01.T01:CDS | 40.0% |
| !! | AAGAAGCACCATGAAAAGCA+CGG | + | Chr8:70561184-70561203 | None:intergenic | 40.0% |
| !! | GCTAGAATCATTTCTGAGGT+TGG | - | Chr8:70561940-70561959 | MsG0880046207.01.T01:intron | 40.0% |
| AAATGGCGCTATTACCATGC+CGG | - | Chr8:70562576-70562595 | MsG0880046207.01.T01:CDS | 45.0% | |
| ACATATATACATCCCCCCCT+TGG | + | Chr8:70562903-70562922 | None:intergenic | 45.0% | |
| ATTGAGTTCCCATTTCCAGC+AGG | - | Chr8:70562381-70562400 | MsG0880046207.01.T01:intron | 45.0% | |
| CCTTCTCATTTGGGGAAAAG+AGG | - | Chr8:70561284-70561303 | MsG0880046207.01.T01:CDS | 45.0% | |
| CCTTCTTCCAAATCTCTTGG+CGG | + | Chr8:70562445-70562464 | None:intergenic | 45.0% | |
| CGCCAAGAGATTTGGAAGAA+GGG | - | Chr8:70562443-70562462 | MsG0880046207.01.T01:intron | 45.0% | |
| CGTATCTCCAACAAATCTGG+TGG | - | Chr8:70562340-70562359 | MsG0880046207.01.T01:intron | 45.0% | |
| CTTCTTCCAAATCTCTTGGC+GGG | + | Chr8:70562444-70562463 | None:intergenic | 45.0% | |
| GATTGCACACACACTAAAGG+TGG | - | Chr8:70562660-70562679 | MsG0880046207.01.T01:intron | 45.0% | |
| TGGGGCTAGAATCATTTCTG+AGG | - | Chr8:70561936-70561955 | MsG0880046207.01.T01:intron | 45.0% | |
| TGGTAATAGCGCCATTTACC+TGG | + | Chr8:70562573-70562592 | None:intergenic | 45.0% | |
| ! | ATCTGGTGGTTTGAAGTGGA+CGG | - | Chr8:70562354-70562373 | MsG0880046207.01.T01:intron | 45.0% |
| ! | CCTCTTTTCCCCAAATGAGA+AGG | + | Chr8:70561287-70561306 | None:intergenic | 45.0% |
| ! | GATTCTAAGAGGTCCAAAGG+TGG | - | Chr8:70562013-70562032 | MsG0880046207.01.T01:intron | 45.0% |
| ! | GGCGATTTTGTGGTTGAAGA+TGG | - | Chr8:70562597-70562616 | MsG0880046207.01.T01:intron | 45.0% |
| ! | TCTCTCAACCGTGCTTTTCA+TGG | - | Chr8:70561173-70561192 | MsG0880046207.01.T01:three_prime_UTR | 45.0% |
| !! | CAAAAAAAAAAAAAAAAATA+GGG | - | Chr8:70562849-70562868 | MsG0880046207.01.T01:CDS | 5.0% |
| !! | TCAAAAAAAAAAAAAAAAAT+AGG | - | Chr8:70562848-70562867 | MsG0880046207.01.T01:CDS | 5.0% |
| CCGCCAAGAGATTTGGAAGA+AGG | - | Chr8:70562442-70562461 | MsG0880046207.01.T01:intron | 50.0% | |
| TAACTTGGCGTCATGATCCC+CGG | + | Chr8:70562201-70562220 | None:intergenic | 50.0% | |
| ! | TTACCATGCCGGCGATTTTG+TGG | - | Chr8:70562587-70562606 | MsG0880046207.01.T01:intron | 50.0% |
| !!! | GTTGGCGATTTTCGGGTTTG+CGG | - | Chr8:70561691-70561710 | MsG0880046207.01.T01:intron | 50.0% |
| AGTTGCGACAGCTAGTACCG+GGG | - | Chr8:70562181-70562200 | MsG0880046207.01.T01:intron | 55.0% | |
| CAACCACAAAATCGCCGGCA+TGG | + | Chr8:70562593-70562612 | None:intergenic | 55.0% | |
| CAGTTGCGACAGCTAGTACC+GGG | - | Chr8:70562180-70562199 | MsG0880046207.01.T01:intron | 55.0% | |
| CCAGTTGCGACAGCTAGTAC+CGG | - | Chr8:70562179-70562198 | MsG0880046207.01.T01:intron | 55.0% | |
| CGGTACTAGCTGTCGCAACT+GGG | + | Chr8:70562181-70562200 | None:intergenic | 55.0% | |
| GGGAAACCCGCCAAGAGATT+TGG | - | Chr8:70562435-70562454 | MsG0880046207.01.T01:intron | 55.0% | |
| TGTCGCAACTGGGATCGCAA+TGG | + | Chr8:70562171-70562190 | None:intergenic | 55.0% | |
| CCGGTACTAGCTGTCGCAAC+TGG | + | Chr8:70562182-70562201 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 70560998 | 70563036 | 70560998 | ID=MsG0880046207.01;Name=MsG0880046207.01 |
| Chr8 | mRNA | 70560998 | 70563036 | 70560998 | ID=MsG0880046207.01.T01;Parent=MsG0880046207.01;Name=MsG0880046207.01.T01;_AED=0.27;_eAED=0.27;_QI=46|1|1|1|1|1|3|281|286 |
| Chr8 | exon | 70560998 | 70561708 | 70560998 | ID=MsG0880046207.01.T01:exon:27536;Parent=MsG0880046207.01.T01 |
| Chr8 | exon | 70562482 | 70562600 | 70562482 | ID=MsG0880046207.01.T01:exon:27535;Parent=MsG0880046207.01.T01 |
| Chr8 | exon | 70562679 | 70563036 | 70562679 | ID=MsG0880046207.01.T01:exon:27534;Parent=MsG0880046207.01.T01 |
| Chr8 | five_prime_UTR | 70562991 | 70563036 | 70562991 | ID=MsG0880046207.01.T01:five_prime_utr;Parent=MsG0880046207.01.T01 |
| Chr8 | CDS | 70562679 | 70562990 | 70562679 | ID=MsG0880046207.01.T01:cds;Parent=MsG0880046207.01.T01 |
| Chr8 | CDS | 70562482 | 70562600 | 70562482 | ID=MsG0880046207.01.T01:cds;Parent=MsG0880046207.01.T01 |
| Chr8 | CDS | 70561279 | 70561708 | 70561279 | ID=MsG0880046207.01.T01:cds;Parent=MsG0880046207.01.T01 |
| Chr8 | three_prime_UTR | 70560998 | 70561278 | 70560998 | ID=MsG0880046207.01.T01:three_prime_utr;Parent=MsG0880046207.01.T01 |
| Gene Sequence |
| Protein sequence |
