Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042948.01.T01 | XP_003627497.1 | 98.148 | 108 | 1 | 1 | 1 | 107 | 1 | 108 | 4.41E-69 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042948.01.T01 | Q9ZUZ3 | 67 | 100 | 29 | 2 | 1 | 99 | 1 | 97 | 1.90E-39 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042948.01.T01 | B7FME9 | 98.148 | 108 | 1 | 1 | 1 | 107 | 1 | 108 | 2.10e-69 | 212 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048748.01 | MsG0880042948.01 | 0.813859 | 2.068180e-51 | 1.366070e-48 |
| MsG0080048938.01 | MsG0880042948.01 | 0.818342 | 2.060884e-52 | 1.538665e-49 |
| MsG0080049069.01 | MsG0880042948.01 | 0.825366 | 4.874090e-54 | 4.433430e-51 |
| MsG0080049147.01 | MsG0880042948.01 | 0.801546 | 8.555849e-49 | 4.097054e-46 |
| MsG0180000008.01 | MsG0880042948.01 | 0.823576 | 1.286153e-53 | 1.111740e-50 |
| MsG0180000097.01 | MsG0880042948.01 | -0.850313 | 1.841368e-60 | 3.592270e-57 |
| MsG0180000151.01 | MsG0880042948.01 | 0.829520 | 4.916465e-55 | 5.043906e-52 |
| MsG0180000221.01 | MsG0880042948.01 | 0.823267 | 1.518696e-53 | 1.301304e-50 |
| MsG0180000942.01 | MsG0880042948.01 | 0.833335 | 5.658929e-56 | 6.497397e-53 |
| MsG0180000977.01 | MsG0880042948.01 | 0.824253 | 8.921921e-54 | 7.860614e-51 |
| MsG0180001149.01 | MsG0880042948.01 | 0.806174 | 9.348669e-50 | 5.040337e-47 |
| MsG0180001548.01 | MsG0880042948.01 | 0.800218 | 1.597658e-48 | 7.397736e-46 |
| MsG0180003253.01 | MsG0880042948.01 | 0.804769 | 1.842502e-49 | 9.581904e-47 |
| MsG0180004025.01 | MsG0880042948.01 | 0.871869 | 4.920010e-67 | 2.015352e-63 |
| MsG0180004085.01 | MsG0880042948.01 | 0.814794 | 1.284665e-51 | 8.703251e-49 |
| MsG0180004106.01 | MsG0880042948.01 | 0.824264 | 8.867248e-54 | 7.814925e-51 |
| MsG0180005240.01 | MsG0880042948.01 | 0.804997 | 1.651083e-49 | 8.636702e-47 |
| MsG0180005270.01 | MsG0880042948.01 | 0.801613 | 8.290625e-49 | 3.976696e-46 |
| MsG0180005339.01 | MsG0880042948.01 | 0.854456 | 1.216163e-61 | 2.717529e-58 |
| MsG0180005457.01 | MsG0880042948.01 | 0.803743 | 3.013970e-49 | 1.526510e-46 |
| MsG0180005639.01 | MsG0880042948.01 | 0.814502 | 1.491567e-51 | 1.002608e-48 |
| MsG0180005881.01 | MsG0880042948.01 | -0.843917 | 1.043187e-58 | 1.657029e-55 |
| MsG0180006054.01 | MsG0880042948.01 | 0.831081 | 2.043614e-55 | 2.194344e-52 |
| MsG0780040794.01 | MsG0880042948.01 | 0.828424 | 9.058474e-55 | 9.000518e-52 |
| MsG0780041015.01 | MsG0880042948.01 | -0.875853 | 2.219944e-68 | 1.052991e-64 |
| MsG0780041080.01 | MsG0880042948.01 | 0.826237 | 3.028474e-54 | 2.823973e-51 |
| MsG0780041191.01 | MsG0880042948.01 | 0.824142 | 9.473017e-54 | 8.320466e-51 |
| MsG0780041301.01 | MsG0880042948.01 | 0.830616 | 2.656754e-55 | 2.813740e-52 |
| MsG0780041747.01 | MsG0880042948.01 | 0.812632 | 3.845699e-51 | 2.457706e-48 |
| MsG0880041852.01 | MsG0880042948.01 | 0.848311 | 6.644533e-60 | 1.214421e-56 |
| MsG0880042000.01 | MsG0880042948.01 | 0.826005 | 3.439299e-54 | 3.186031e-51 |
| MsG0880042086.01 | MsG0880042948.01 | 0.827065 | 1.921416e-54 | 1.834845e-51 |
| MsG0880042415.01 | MsG0880042948.01 | 0.805137 | 1.543798e-49 | 8.104609e-47 |
| MsG0880042416.01 | MsG0880042948.01 | 0.811590 | 6.489726e-51 | 4.033120e-48 |
| MsG0880042622.01 | MsG0880042948.01 | 0.815387 | 9.487851e-52 | 6.532331e-49 |
| MsG0880042794.01 | MsG0880042948.01 | 0.857808 | 1.268115e-62 | 3.168597e-59 |
| MsG0880042948.01 | MsG0880043107.01 | 0.834376 | 3.107431e-56 | 3.680976e-53 |
| MsG0880042948.01 | MsG0880043829.01 | 0.845076 | 5.088147e-59 | 8.381866e-56 |
| MsG0880042948.01 | MsG0880044876.01 | 0.812167 | 4.857068e-51 | 3.065772e-48 |
| MsG0880042948.01 | MsG0880045190.01 | 0.838020 | 3.684330e-57 | 4.872842e-54 |
| MsG0880042948.01 | MsG0880045543.01 | 0.801118 | 1.047014e-48 | 4.960126e-46 |
| MsG0880042948.01 | MsG0880045544.01 | 0.806406 | 8.353771e-50 | 4.530414e-47 |
| MsG0880042948.01 | MsG0880045624.01 | 0.814941 | 1.192334e-51 | 8.109405e-49 |
| MsG0880042948.01 | MsG0880045783.01 | 0.829747 | 4.330178e-55 | 4.472625e-52 |
| MsG0880042948.01 | MsG0880045926.01 | 0.813138 | 2.979071e-51 | 1.929507e-48 |
| MsG0880042948.01 | MsG0880046207.01 | 0.883726 | 3.513842e-71 | 2.254782e-67 |
| MsG0880042948.01 | MsG0880046268.01 | 0.825472 | 4.600950e-54 | 4.197598e-51 |
| MsG0880042948.01 | MsG0880047152.01 | 0.801528 | 8.627594e-49 | 4.129648e-46 |
| MsG0880042948.01 | MsG0880047206.01 | 0.836587 | 8.573833e-57 | 1.085256e-53 |
| MsG0280011073.01 | MsG0880042948.01 | 0.819344 | 1.220378e-52 | 9.365468e-50 |
| MsG0280011376.01 | MsG0880042948.01 | 0.846778 | 1.754349e-59 | 3.053017e-56 |
| MsG0380011895.01 | MsG0880042948.01 | 0.821165 | 4.668043e-53 | 3.769013e-50 |
| MsG0380012005.01 | MsG0880042948.01 | 0.825402 | 4.781060e-54 | 4.353359e-51 |
| MsG0380012184.01 | MsG0880042948.01 | 0.807151 | 5.815416e-50 | 3.214915e-47 |
| MsG0380013342.01 | MsG0880042948.01 | 0.815753 | 7.865117e-52 | 5.469992e-49 |
| MsG0380013853.01 | MsG0880042948.01 | 0.845603 | 3.663920e-59 | 6.138203e-56 |
| MsG0380013908.01 | MsG0880042948.01 | 0.843385 | 1.447540e-58 | 2.261250e-55 |
| MsG0380014727.01 | MsG0880042948.01 | 0.855192 | 7.440762e-62 | 1.703664e-58 |
| MsG0380014756.01 | MsG0880042948.01 | 0.806569 | 7.717143e-50 | 4.202740e-47 |
| MsG0680031334.01 | MsG0880042948.01 | 0.803836 | 2.882904e-49 | 1.463635e-46 |
| MsG0680031377.01 | MsG0880042948.01 | -0.828258 | 9.934785e-55 | 9.822713e-52 |
| MsG0680031562.01 | MsG0880042948.01 | 0.811847 | 5.705368e-51 | 3.569944e-48 |
| MsG0680031996.01 | MsG0880042948.01 | 0.821824 | 3.288237e-53 | 2.704549e-50 |
| MsG0680032460.01 | MsG0880042948.01 | -0.803660 | 3.136114e-49 | 1.584924e-46 |
| MsG0680033136.01 | MsG0880042948.01 | 0.830263 | 3.240468e-55 | 3.396970e-52 |
| MsG0680033639.01 | MsG0880042948.01 | 0.805362 | 1.384717e-49 | 7.311647e-47 |
| MsG0680034032.01 | MsG0880042948.01 | 0.807046 | 6.120517e-50 | 3.374406e-47 |
| MsG0680034914.01 | MsG0880042948.01 | 0.810676 | 1.023958e-50 | 6.211787e-48 |
| MsG0480018995.01 | MsG0880042948.01 | 0.835501 | 1.617640e-56 | 1.981849e-53 |
| MsG0480019313.01 | MsG0880042948.01 | 0.823731 | 1.182885e-53 | 1.027137e-50 |
| MsG0480019384.01 | MsG0880042948.01 | 0.867804 | 1.044356e-65 | 3.693417e-62 |
| MsG0480019546.01 | MsG0880042948.01 | 0.825934 | 3.575512e-54 | 3.305588e-51 |
| MsG0480019547.01 | MsG0880042948.01 | 0.819749 | 9.862447e-53 | 7.655744e-50 |
| MsG0480020322.01 | MsG0880042948.01 | 0.870409 | 1.491617e-66 | 5.796349e-63 |
| MsG0480020323.01 | MsG0880042948.01 | 0.875656 | 2.593661e-68 | 1.221056e-64 |
| MsG0480020433.01 | MsG0880042948.01 | 0.809511 | 1.825430e-50 | 1.073824e-47 |
| MsG0480021564.01 | MsG0880042948.01 | 0.824982 | 6.007481e-54 | 5.405537e-51 |
| MsG0480021690.01 | MsG0880042948.01 | 0.841617 | 4.262063e-58 | 6.297898e-55 |
| MsG0480021830.01 | MsG0880042948.01 | 0.829358 | 5.381978e-55 | 5.496062e-52 |
| MsG0480022065.01 | MsG0880042948.01 | 0.812387 | 4.350058e-51 | 2.762100e-48 |
| MsG0480022066.01 | MsG0880042948.01 | 0.811155 | 8.064215e-51 | 4.954587e-48 |
| MsG0480022162.01 | MsG0880042948.01 | 0.807776 | 4.284534e-50 | 2.407489e-47 |
| MsG0480022330.01 | MsG0880042948.01 | 0.828656 | 7.963082e-55 | 7.965420e-52 |
| MsG0480022535.01 | MsG0880042948.01 | 0.920229 | 1.666074e-87 | 5.588332e-83 |
| MsG0480022739.01 | MsG0880042948.01 | -0.828602 | 8.206719e-55 | 8.196296e-52 |
| MsG0480022802.01 | MsG0880042948.01 | 0.831356 | 1.748253e-55 | 1.892599e-52 |
| MsG0480022918.01 | MsG0880042948.01 | 0.816520 | 5.300037e-52 | 3.763952e-49 |
| MsG0480023251.01 | MsG0880042948.01 | 0.800714 | 1.266300e-48 | 5.937335e-46 |
| MsG0580024597.01 | MsG0880042948.01 | 0.807525 | 4.843771e-50 | 2.704067e-47 |
| MsG0580024601.01 | MsG0880042948.01 | 0.800391 | 1.473423e-48 | 6.852506e-46 |
| MsG0580025226.01 | MsG0880042948.01 | 0.816695 | 4.844084e-52 | 3.456524e-49 |
| MsG0580025280.01 | MsG0880042948.01 | 0.808519 | 2.976138e-50 | 1.705315e-47 |
| MsG0580025644.01 | MsG0880042948.01 | 0.871915 | 4.748723e-67 | 1.948535e-63 |
| MsG0580025686.01 | MsG0880042948.01 | 0.813775 | 2.158353e-51 | 1.422378e-48 |
| MsG0580025827.01 | MsG0880042948.01 | 0.805033 | 1.622591e-49 | 8.495400e-47 |
| MsG0580026031.01 | MsG0880042948.01 | 0.833795 | 4.344165e-56 | 5.056939e-53 |
| MsG0580026032.01 | MsG0880042948.01 | 0.847820 | 9.077995e-60 | 1.633312e-56 |
| MsG0380014982.01 | MsG0880042948.01 | 0.862497 | 4.859384e-64 | 1.426154e-60 |
| MsG0380015745.01 | MsG0880042948.01 | 0.802751 | 4.834254e-49 | 2.387128e-46 |
| MsG0380015810.01 | MsG0880042948.01 | 0.830997 | 2.142192e-55 | 2.294463e-52 |
| MsG0380015847.01 | MsG0880042948.01 | -0.804449 | 2.148596e-49 | 1.108127e-46 |
| MsG0380015891.01 | MsG0880042948.01 | 0.809417 | 1.911806e-50 | 1.121906e-47 |
| MsG0380016182.01 | MsG0880042948.01 | 0.875933 | 2.083983e-68 | 9.916073e-65 |
| MsG0380016740.01 | MsG0880042948.01 | 0.815202 | 1.042903e-51 | 7.143622e-49 |
| MsG0380017037.01 | MsG0880042948.01 | 0.809768 | 1.607253e-50 | 9.520345e-48 |
| MsG0380017665.01 | MsG0880042948.01 | -0.820854 | 5.505058e-53 | 4.406662e-50 |
| MsG0380017793.01 | MsG0880042948.01 | 0.810233 | 1.276458e-50 | 7.652669e-48 |
| MsG0480018402.01 | MsG0880042948.01 | 0.800910 | 1.154587e-48 | 5.441107e-46 |
| MsG0580026304.01 | MsG0880042948.01 | 0.812354 | 4.421744e-51 | 2.805249e-48 |
| MsG0580027789.01 | MsG0880042948.01 | 0.808582 | 2.885524e-50 | 1.656043e-47 |
| MsG0580029429.01 | MsG0880042948.01 | 0.847071 | 1.458146e-59 | 2.561572e-56 |
| MsG0580029799.01 | MsG0880042948.01 | 0.803794 | 2.940194e-49 | 1.491127e-46 |
| MsG0680030636.01 | MsG0880042948.01 | 0.818716 | 1.694902e-52 | 1.278465e-49 |
| MsG0280006552.01 | MsG0880042948.01 | 0.845876 | 3.089312e-59 | 5.222285e-56 |
| MsG0280006588.01 | MsG0880042948.01 | 0.803799 | 2.933381e-49 | 1.487851e-46 |
| MsG0280006589.01 | MsG0880042948.01 | 0.827685 | 1.364947e-54 | 1.327144e-51 |
| MsG0280006669.01 | MsG0880042948.01 | 0.842388 | 2.665902e-58 | 4.036170e-55 |
| MsG0280006753.01 | MsG0880042948.01 | -0.810719 | 1.002357e-50 | 6.087790e-48 |
| MsG0280007429.01 | MsG0880042948.01 | 0.810403 | 1.173070e-50 | 7.064186e-48 |
| MsG0280007864.01 | MsG0880042948.01 | -0.822574 | 2.202351e-53 | 1.850749e-50 |
| MsG0280007867.01 | MsG0880042948.01 | 0.838705 | 2.453811e-57 | 3.313717e-54 |
| MsG0280008098.01 | MsG0880042948.01 | 0.804364 | 2.238559e-49 | 1.152017e-46 |
| MsG0280008894.01 | MsG0880042948.01 | 0.812779 | 3.571331e-51 | 2.291058e-48 |
| MsG0280008932.01 | MsG0880042948.01 | 0.807613 | 4.640411e-50 | 2.596303e-47 |
| MsG0280009507.01 | MsG0880042948.01 | 0.801631 | 8.221897e-49 | 3.945505e-46 |
| MsG0280009624.01 | MsG0880042948.01 | 0.817937 | 2.544151e-52 | 1.878311e-49 |
| MsG0280009757.01 | MsG0880042948.01 | 0.843150 | 1.672575e-58 | 2.592913e-55 |
| MsG0680035707.01 | MsG0880042948.01 | 0.800578 | 1.349829e-48 | 6.307452e-46 |
| MsG0780036116.01 | MsG0880042948.01 | 0.806684 | 7.297797e-50 | 3.985924e-47 |
| MsG0780036128.01 | MsG0880042948.01 | 0.810917 | 9.083117e-51 | 5.545998e-48 |
| MsG0780036978.01 | MsG0880042948.01 | 0.837302 | 5.630544e-57 | 7.283110e-54 |
| MsG0780037052.01 | MsG0880042948.01 | -0.812856 | 3.434369e-51 | 2.207680e-48 |
| MsG0780037105.01 | MsG0880042948.01 | 0.916641 | 1.394725e-85 | 3.868829e-81 |
| MsG0780038833.01 | MsG0880042948.01 | 0.807684 | 4.482987e-50 | 2.512915e-47 |
| MsG0780039498.01 | MsG0880042948.01 | 0.819115 | 1.376046e-52 | 1.049472e-49 |
| MsG0780040177.01 | MsG0880042948.01 | 0.800849 | 1.188228e-48 | 5.590844e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042948.01.T01 | MTR_8g026730 | 98.148 | 108 | 1 | 1 | 1 | 107 | 1 | 108 | 5.34e-73 | 212 |
| MsG0880042948.01.T01 | MTR_7g118010 | 72.477 | 109 | 24 | 2 | 1 | 107 | 1 | 105 | 3.56e-49 | 152 |
| MsG0880042948.01.T01 | MTR_3g092220 | 62.000 | 100 | 34 | 2 | 10 | 105 | 13 | 112 | 2.74e-37 | 122 |
| MsG0880042948.01.T01 | MTR_0388s0020 | 55.882 | 68 | 29 | 1 | 26 | 92 | 74 | 141 | 7.62e-20 | 79.0 |
| MsG0880042948.01.T01 | MTR_4g025830 | 53.333 | 75 | 34 | 1 | 27 | 100 | 79 | 153 | 1.55e-19 | 78.6 |
| MsG0880042948.01.T01 | MTR_4g072300 | 48.529 | 68 | 32 | 2 | 27 | 93 | 26 | 91 | 7.29e-18 | 72.4 |
| MsG0880042948.01.T01 | MTR_4g072640 | 44.737 | 76 | 39 | 2 | 19 | 93 | 17 | 90 | 2.08e-17 | 71.2 |
| MsG0880042948.01.T01 | MTR_2g043960 | 44.156 | 77 | 41 | 1 | 10 | 86 | 59 | 133 | 2.50e-17 | 72.8 |
| MsG0880042948.01.T01 | MTR_5g008370 | 38.889 | 90 | 52 | 2 | 8 | 96 | 6 | 93 | 6.71e-17 | 71.2 |
| MsG0880042948.01.T01 | MTR_4g072500 | 48.529 | 68 | 32 | 2 | 27 | 93 | 25 | 90 | 1.20e-16 | 69.3 |
| MsG0880042948.01.T01 | MTR_4g072330 | 40.000 | 80 | 45 | 2 | 15 | 93 | 11 | 88 | 1.74e-16 | 68.9 |
| MsG0880042948.01.T01 | MTR_4g072220 | 50.794 | 63 | 28 | 2 | 27 | 88 | 26 | 86 | 2.01e-16 | 68.6 |
| MsG0880042948.01.T01 | MTR_4g072240 | 45.588 | 68 | 34 | 2 | 27 | 93 | 26 | 91 | 3.08e-16 | 68.2 |
| MsG0880042948.01.T01 | MTR_4g124750 | 40.260 | 77 | 44 | 1 | 27 | 103 | 69 | 143 | 3.55e-16 | 69.7 |
| MsG0880042948.01.T01 | MTR_1g009150 | 45.588 | 68 | 35 | 1 | 26 | 93 | 70 | 135 | 4.00e-16 | 70.1 |
| MsG0880042948.01.T01 | MTR_4g072530 | 50.000 | 68 | 31 | 2 | 27 | 93 | 25 | 90 | 4.20e-16 | 67.8 |
| MsG0880042948.01.T01 | MTR_1g063290 | 37.895 | 95 | 52 | 1 | 1 | 88 | 6 | 100 | 6.35e-16 | 67.8 |
| MsG0880042948.01.T01 | MTR_4g005320 | 45.455 | 77 | 37 | 2 | 27 | 100 | 70 | 144 | 6.57e-16 | 69.3 |
| MsG0880042948.01.T01 | MTR_4g072570 | 45.588 | 68 | 34 | 2 | 27 | 93 | 25 | 90 | 9.05e-16 | 67.0 |
| MsG0880042948.01.T01 | MTR_1g063300 | 38.542 | 96 | 49 | 2 | 3 | 88 | 5 | 100 | 1.16e-15 | 67.0 |
| MsG0880042948.01.T01 | MTR_4g057810 | 38.095 | 84 | 52 | 0 | 5 | 88 | 16 | 99 | 1.57e-15 | 67.4 |
| MsG0880042948.01.T01 | MTR_4g072940 | 49.206 | 63 | 29 | 2 | 27 | 88 | 57 | 117 | 2.38e-15 | 67.0 |
| MsG0880042948.01.T01 | MTR_4g072600 | 42.500 | 80 | 41 | 3 | 18 | 94 | 9 | 86 | 3.69e-15 | 65.5 |
| MsG0880042948.01.T01 | MTR_3g117640 | 50.000 | 66 | 31 | 2 | 26 | 90 | 33 | 97 | 5.17e-15 | 65.5 |
| MsG0880042948.01.T01 | MTR_3g109160 | 39.024 | 82 | 48 | 1 | 26 | 107 | 68 | 147 | 7.31e-15 | 66.6 |
| MsG0880042948.01.T01 | MTR_4g072250 | 44.118 | 68 | 34 | 2 | 27 | 93 | 26 | 90 | 7.69e-15 | 64.7 |
| MsG0880042948.01.T01 | MTR_3g117610 | 44.118 | 68 | 36 | 1 | 27 | 94 | 45 | 110 | 9.96e-15 | 64.7 |
| MsG0880042948.01.T01 | MTR_7g101890 | 43.548 | 62 | 35 | 0 | 27 | 88 | 52 | 113 | 1.09e-14 | 65.1 |
| MsG0880042948.01.T01 | MTR_4g072860 | 45.588 | 68 | 34 | 2 | 27 | 93 | 26 | 91 | 1.09e-14 | 64.3 |
| MsG0880042948.01.T01 | MTR_4g072980 | 43.902 | 82 | 36 | 3 | 18 | 90 | 10 | 90 | 1.18e-14 | 64.3 |
| MsG0880042948.01.T01 | MTR_4g072890 | 44.118 | 68 | 35 | 2 | 27 | 93 | 26 | 91 | 1.25e-14 | 63.9 |
| MsG0880042948.01.T01 | MTR_2g066830 | 50.000 | 62 | 29 | 1 | 27 | 88 | 58 | 117 | 1.41e-14 | 65.5 |
| MsG0880042948.01.T01 | MTR_3g084250 | 51.667 | 60 | 26 | 2 | 27 | 85 | 25 | 82 | 1.44e-14 | 63.9 |
| MsG0880042948.01.T01 | MTR_1g063260 | 35.052 | 97 | 54 | 1 | 1 | 88 | 6 | 102 | 1.91e-14 | 63.9 |
| MsG0880042948.01.T01 | MTR_8g094980 | 36.585 | 82 | 41 | 1 | 27 | 97 | 3 | 84 | 2.22e-14 | 63.9 |
| MsG0880042948.01.T01 | MTR_4g072880 | 47.619 | 63 | 30 | 2 | 27 | 88 | 26 | 86 | 3.23e-14 | 63.2 |
| MsG0880042948.01.T01 | MTR_4g072850 | 47.619 | 63 | 30 | 2 | 27 | 88 | 27 | 87 | 4.07e-14 | 62.8 |
| MsG0880042948.01.T01 | MTR_4g072230 | 46.032 | 63 | 29 | 2 | 27 | 88 | 26 | 84 | 4.25e-14 | 62.8 |
| MsG0880042948.01.T01 | MTR_1g024085 | 47.826 | 69 | 34 | 1 | 27 | 95 | 37 | 103 | 4.43e-14 | 63.9 |
| MsG0880042948.01.T01 | MTR_1g059770 | 40.506 | 79 | 43 | 2 | 20 | 96 | 40 | 116 | 4.44e-14 | 63.5 |
| MsG0880042948.01.T01 | MTR_4g072910 | 35.106 | 94 | 58 | 2 | 1 | 93 | 9 | 100 | 4.47e-14 | 62.8 |
| MsG0880042948.01.T01 | MTR_4g072870 | 48.333 | 60 | 28 | 2 | 27 | 85 | 26 | 83 | 6.71e-14 | 62.4 |
| MsG0880042948.01.T01 | MTR_4g072580 | 40.000 | 80 | 43 | 3 | 18 | 94 | 9 | 86 | 7.55e-14 | 62.0 |
| MsG0880042948.01.T01 | MTR_3g097120 | 40.000 | 75 | 39 | 1 | 27 | 95 | 9 | 83 | 7.69e-14 | 62.4 |
| MsG0880042948.01.T01 | MTR_4g072310 | 42.647 | 68 | 36 | 2 | 27 | 93 | 26 | 91 | 1.09e-13 | 61.6 |
| MsG0880042948.01.T01 | MTR_4g072370 | 36.585 | 82 | 49 | 2 | 13 | 93 | 9 | 88 | 1.20e-13 | 61.6 |
| MsG0880042948.01.T01 | MTR_3g084240 | 41.772 | 79 | 41 | 3 | 10 | 85 | 6 | 82 | 1.23e-13 | 61.6 |
| MsG0880042948.01.T01 | MTR_4g072480 | 45.588 | 68 | 34 | 2 | 27 | 93 | 25 | 90 | 1.28e-13 | 61.6 |
| MsG0880042948.01.T01 | MTR_7g101920 | 40.625 | 64 | 38 | 0 | 25 | 88 | 33 | 96 | 1.35e-13 | 62.0 |
| MsG0880042948.01.T01 | MTR_4g072820 | 48.333 | 60 | 28 | 2 | 27 | 85 | 20 | 77 | 1.46e-13 | 61.2 |
| MsG0880042948.01.T01 | MTR_8g461420 | 42.029 | 69 | 37 | 2 | 27 | 94 | 25 | 91 | 1.90e-13 | 61.2 |
| MsG0880042948.01.T01 | MTR_4g072730 | 42.105 | 76 | 41 | 2 | 19 | 93 | 17 | 90 | 1.99e-13 | 61.2 |
| MsG0880042948.01.T01 | MTR_4g050700 | 45.070 | 71 | 36 | 2 | 19 | 88 | 18 | 86 | 2.35e-13 | 60.8 |
| MsG0880042948.01.T01 | MTR_2g012410 | 45.070 | 71 | 36 | 2 | 19 | 88 | 18 | 86 | 2.35e-13 | 60.8 |
| MsG0880042948.01.T01 | MTR_3g084190 | 42.029 | 69 | 37 | 2 | 27 | 94 | 25 | 91 | 2.84e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_3g084170 | 37.975 | 79 | 46 | 2 | 8 | 85 | 6 | 82 | 3.49e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_7g405740 | 41.250 | 80 | 42 | 2 | 25 | 104 | 65 | 139 | 3.64e-13 | 62.0 |
| MsG0880042948.01.T01 | MTR_3g084150 | 42.254 | 71 | 38 | 2 | 19 | 88 | 17 | 85 | 3.65e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_4g072660 | 45.588 | 68 | 34 | 2 | 27 | 93 | 20 | 85 | 3.76e-13 | 60.1 |
| MsG0880042948.01.T01 | MTR_3g084180 | 42.254 | 71 | 38 | 2 | 19 | 88 | 17 | 85 | 3.77e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_3g117630 | 45.588 | 68 | 34 | 2 | 19 | 85 | 17 | 82 | 3.89e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_4g072190 | 42.424 | 66 | 36 | 1 | 27 | 92 | 36 | 99 | 4.57e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_4g072260 | 46.667 | 60 | 29 | 2 | 27 | 85 | 26 | 83 | 4.69e-13 | 60.1 |
| MsG0880042948.01.T01 | MTR_1g063280 | 37.634 | 93 | 45 | 2 | 2 | 81 | 4 | 96 | 5.09e-13 | 60.5 |
| MsG0880042948.01.T01 | MTR_4g072620 | 44.118 | 68 | 35 | 2 | 27 | 93 | 25 | 90 | 5.16e-13 | 60.1 |
| MsG0880042948.01.T01 | MTR_7g104940 | 46.429 | 56 | 30 | 0 | 38 | 93 | 59 | 114 | 5.31e-13 | 60.8 |
| MsG0880042948.01.T01 | MTR_8g461410 | 40.845 | 71 | 39 | 2 | 19 | 88 | 17 | 85 | 5.33e-13 | 60.1 |
| MsG0880042948.01.T01 | MTR_5g008360 | 38.158 | 76 | 44 | 2 | 19 | 93 | 8 | 81 | 6.26e-13 | 59.7 |
| MsG0880042948.01.T01 | MTR_4g072610 | 36.782 | 87 | 50 | 3 | 11 | 94 | 1 | 85 | 6.66e-13 | 59.7 |
| MsG0880042948.01.T01 | MTR_4g072670 | 42.647 | 68 | 36 | 2 | 27 | 93 | 21 | 86 | 6.95e-13 | 59.3 |
| MsG0880042948.01.T01 | MTR_3g098970 | 48.387 | 62 | 30 | 1 | 27 | 88 | 53 | 112 | 7.74e-13 | 60.8 |
| MsG0880042948.01.T01 | MTR_4g072270 | 41.176 | 68 | 37 | 2 | 27 | 93 | 26 | 91 | 8.33e-13 | 59.3 |
| MsG0880042948.01.T01 | MTR_3g084220 | 40.541 | 74 | 41 | 2 | 8 | 80 | 6 | 77 | 8.96e-13 | 59.3 |
| MsG0880042948.01.T01 | MTR_3g084230 | 42.029 | 69 | 37 | 2 | 27 | 94 | 25 | 91 | 1.15e-12 | 58.9 |
| MsG0880042948.01.T01 | MTR_4g072560 | 42.029 | 69 | 38 | 2 | 26 | 93 | 31 | 98 | 1.23e-12 | 59.3 |
| MsG0880042948.01.T01 | MTR_8g096440 | 42.029 | 69 | 38 | 1 | 17 | 85 | 35 | 101 | 1.28e-12 | 60.1 |
| MsG0880042948.01.T01 | MTR_4g072540 | 43.077 | 65 | 34 | 2 | 27 | 90 | 21 | 83 | 1.48e-12 | 58.5 |
| MsG0880042948.01.T01 | MTR_3g110042 | 41.333 | 75 | 41 | 2 | 19 | 92 | 17 | 89 | 1.53e-12 | 58.9 |
| MsG0880042948.01.T01 | MTR_4g072450 | 40.580 | 69 | 38 | 2 | 26 | 93 | 19 | 85 | 1.63e-12 | 58.5 |
| MsG0880042948.01.T01 | MTR_4g072770 | 43.478 | 69 | 36 | 2 | 27 | 94 | 15 | 81 | 1.86e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_4g072630 | 46.032 | 63 | 31 | 2 | 27 | 88 | 21 | 81 | 2.24e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_4g072550 | 47.619 | 63 | 30 | 2 | 27 | 88 | 36 | 96 | 2.25e-12 | 58.5 |
| MsG0880042948.01.T01 | MTR_4g072160 | 45.588 | 68 | 35 | 1 | 27 | 94 | 37 | 102 | 2.29e-12 | 59.3 |
| MsG0880042948.01.T01 | MTR_3g084210 | 42.647 | 68 | 36 | 2 | 27 | 93 | 25 | 90 | 2.30e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_4g072590 | 46.667 | 60 | 29 | 2 | 27 | 85 | 20 | 77 | 2.36e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_4g072720 | 44.615 | 65 | 33 | 2 | 27 | 90 | 21 | 83 | 2.44e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_7g104950 | 42.857 | 56 | 32 | 0 | 38 | 93 | 59 | 114 | 2.71e-12 | 58.9 |
| MsG0880042948.01.T01 | MTR_3g110045 | 42.029 | 69 | 37 | 2 | 27 | 94 | 84 | 150 | 2.80e-12 | 59.7 |
| MsG0880042948.01.T01 | MTR_4g072680 | 47.619 | 63 | 30 | 2 | 27 | 88 | 25 | 85 | 3.11e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_3g084160 | 42.029 | 69 | 37 | 2 | 27 | 94 | 25 | 91 | 3.46e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_2g095430 | 38.824 | 85 | 50 | 2 | 3 | 85 | 21 | 105 | 3.58e-12 | 58.9 |
| MsG0880042948.01.T01 | MTR_3g110038 | 35.366 | 82 | 50 | 2 | 8 | 88 | 6 | 85 | 3.74e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_4g072460 | 47.619 | 63 | 30 | 2 | 27 | 88 | 25 | 85 | 4.03e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_3g113310 | 39.394 | 66 | 38 | 1 | 27 | 92 | 42 | 105 | 4.08e-12 | 58.2 |
| MsG0880042948.01.T01 | MTR_4g072830 | 36.145 | 83 | 50 | 2 | 13 | 94 | 9 | 89 | 4.10e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_1g063330 | 35.135 | 74 | 48 | 0 | 15 | 88 | 20 | 93 | 4.54e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_3g110032 | 44.118 | 68 | 35 | 2 | 19 | 85 | 18 | 83 | 4.65e-12 | 57.4 |
| MsG0880042948.01.T01 | MTR_4g072740 | 41.176 | 68 | 37 | 2 | 27 | 93 | 20 | 85 | 4.98e-12 | 57.4 |
| MsG0880042948.01.T01 | MTR_4g072750 | 51.111 | 45 | 20 | 1 | 27 | 71 | 27 | 69 | 5.20e-12 | 57.4 |
| MsG0880042948.01.T01 | MTR_3g084260 | 44.444 | 63 | 32 | 2 | 19 | 80 | 18 | 78 | 6.43e-12 | 57.4 |
| MsG0880042948.01.T01 | MTR_4g072510 | 43.077 | 65 | 34 | 2 | 27 | 90 | 21 | 83 | 7.37e-12 | 57.0 |
| MsG0880042948.01.T01 | MTR_1g061570 | 45.763 | 59 | 28 | 2 | 27 | 85 | 19 | 73 | 7.60e-12 | 57.8 |
| MsG0880042948.01.T01 | MTR_8g096470 | 40.299 | 67 | 38 | 1 | 28 | 94 | 47 | 111 | 8.91e-12 | 57.4 |
| MsG0880042948.01.T01 | MTR_4g072470 | 39.130 | 69 | 39 | 2 | 26 | 93 | 19 | 85 | 1.02e-11 | 56.6 |
| MsG0880042948.01.T01 | MTR_4g072490 | 41.538 | 65 | 35 | 2 | 27 | 90 | 20 | 82 | 1.16e-11 | 56.2 |
| MsG0880042948.01.T01 | MTR_8g096500 | 44.068 | 59 | 31 | 1 | 27 | 85 | 49 | 105 | 1.58e-11 | 57.8 |
| MsG0880042948.01.T01 | MTR_8g461210 | 39.130 | 69 | 40 | 1 | 27 | 95 | 35 | 101 | 2.18e-11 | 56.6 |
| MsG0880042948.01.T01 | MTR_4g072650 | 33.333 | 87 | 53 | 3 | 11 | 94 | 1 | 85 | 2.29e-11 | 55.5 |
| MsG0880042948.01.T01 | MTR_8g076040 | 42.424 | 66 | 36 | 1 | 27 | 92 | 41 | 104 | 2.52e-11 | 55.8 |
| MsG0880042948.01.T01 | MTR_4g072690 | 42.188 | 64 | 34 | 2 | 26 | 88 | 19 | 80 | 2.81e-11 | 55.5 |
| MsG0880042948.01.T01 | MTR_4g072280 | 54.545 | 44 | 18 | 1 | 27 | 70 | 26 | 67 | 3.45e-11 | 55.1 |
| MsG0880042948.01.T01 | MTR_4g021810 | 43.836 | 73 | 37 | 3 | 27 | 97 | 26 | 96 | 4.00e-11 | 55.5 |
| MsG0880042948.01.T01 | MTR_1g063950 | 39.437 | 71 | 41 | 1 | 27 | 97 | 48 | 116 | 4.18e-11 | 55.8 |
| MsG0880042948.01.T01 | MTR_1g063340 | 33.784 | 74 | 49 | 0 | 15 | 88 | 20 | 93 | 4.30e-11 | 55.5 |
| MsG0880042948.01.T01 | MTR_4g057800 | 36.250 | 80 | 49 | 2 | 9 | 86 | 20 | 99 | 4.97e-11 | 55.8 |
| MsG0880042948.01.T01 | MTR_7g118000 | 67.647 | 34 | 11 | 0 | 55 | 88 | 27 | 60 | 5.91e-11 | 55.5 |
| MsG0880042948.01.T01 | MTR_5g008350 | 48.333 | 60 | 26 | 3 | 25 | 81 | 16 | 73 | 6.86e-11 | 54.3 |
| MsG0880042948.01.T01 | MTR_1g063310 | 37.097 | 62 | 39 | 0 | 27 | 88 | 26 | 87 | 7.53e-11 | 54.7 |
| MsG0880042948.01.T01 | MTR_6g077850 | 33.333 | 69 | 43 | 2 | 27 | 94 | 34 | 100 | 9.84e-11 | 54.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042948.01.T01 | AT2G46690 | 67.000 | 100 | 29 | 2 | 1 | 99 | 1 | 97 | 1.94e-40 | 130 |
| MsG0880042948.01.T01 | AT4G00880 | 69.231 | 91 | 27 | 1 | 7 | 97 | 9 | 98 | 5.31e-38 | 124 |
| MsG0880042948.01.T01 | AT3G61900 | 62.745 | 102 | 34 | 2 | 1 | 98 | 1 | 102 | 6.72e-36 | 119 |
| MsG0880042948.01.T01 | AT5G53590 | 54.167 | 72 | 30 | 1 | 27 | 95 | 46 | 117 | 1.76e-20 | 80.5 |
| MsG0880042948.01.T01 | AT3G60690 | 52.941 | 68 | 31 | 1 | 27 | 93 | 88 | 155 | 1.54e-18 | 76.3 |
| MsG0880042948.01.T01 | AT4G22620 | 55.556 | 63 | 27 | 1 | 27 | 88 | 79 | 141 | 6.22e-18 | 74.3 |
| MsG0880042948.01.T01 | AT4G12410 | 50.725 | 69 | 33 | 1 | 21 | 88 | 70 | 138 | 7.37e-18 | 74.3 |
| MsG0880042948.01.T01 | AT5G20810 | 45.679 | 81 | 41 | 2 | 27 | 106 | 79 | 157 | 2.68e-17 | 72.8 |
| MsG0880042948.01.T01 | AT4G38850 | 47.297 | 74 | 37 | 2 | 21 | 92 | 15 | 88 | 4.47e-17 | 70.5 |
| MsG0880042948.01.T01 | AT5G20810 | 48.649 | 74 | 35 | 2 | 27 | 99 | 79 | 150 | 6.13e-17 | 72.4 |
| MsG0880042948.01.T01 | AT3G43120 | 48.529 | 68 | 33 | 1 | 19 | 86 | 71 | 136 | 8.82e-17 | 71.6 |
| MsG0880042948.01.T01 | AT2G45210 | 52.239 | 67 | 31 | 1 | 27 | 92 | 79 | 145 | 9.20e-17 | 71.6 |
| MsG0880042948.01.T01 | AT3G03850 | 50.769 | 65 | 31 | 1 | 25 | 88 | 23 | 87 | 1.53e-16 | 68.9 |
| MsG0880042948.01.T01 | AT2G21210 | 47.826 | 69 | 35 | 1 | 18 | 85 | 19 | 87 | 1.90e-16 | 68.9 |
| MsG0880042948.01.T01 | AT2G24400 | 42.667 | 75 | 40 | 2 | 23 | 97 | 60 | 131 | 2.31e-16 | 70.9 |
| MsG0880042948.01.T01 | AT4G34770 | 40.000 | 90 | 53 | 1 | 5 | 93 | 13 | 102 | 6.47e-16 | 67.8 |
| MsG0880042948.01.T01 | AT2G21210 | 47.826 | 69 | 35 | 1 | 18 | 85 | 86 | 154 | 9.78e-16 | 68.9 |
| MsG0880042948.01.T01 | AT4G34780 | 42.500 | 80 | 44 | 2 | 26 | 103 | 27 | 106 | 2.24e-15 | 66.6 |
| MsG0880042948.01.T01 | AT4G31320 | 40.278 | 72 | 41 | 1 | 26 | 97 | 79 | 148 | 2.94e-15 | 68.2 |
| MsG0880042948.01.T01 | AT5G18050 | 46.154 | 65 | 33 | 2 | 25 | 88 | 22 | 85 | 3.21e-15 | 65.5 |
| MsG0880042948.01.T01 | AT4G34790 | 55.000 | 60 | 26 | 1 | 27 | 85 | 39 | 98 | 5.07e-15 | 65.5 |
| MsG0880042948.01.T01 | AT3G12830 | 42.857 | 70 | 38 | 1 | 19 | 88 | 42 | 109 | 6.64e-15 | 65.9 |
| MsG0880042948.01.T01 | AT3G03840 | 38.710 | 93 | 56 | 1 | 1 | 92 | 1 | 93 | 7.06e-15 | 64.7 |
| MsG0880042948.01.T01 | AT5G18020 | 43.662 | 71 | 38 | 2 | 25 | 94 | 22 | 91 | 9.44e-15 | 64.3 |
| MsG0880042948.01.T01 | AT5G18080 | 47.692 | 65 | 32 | 2 | 25 | 88 | 22 | 85 | 1.41e-14 | 63.9 |
| MsG0880042948.01.T01 | AT4G38825 | 43.056 | 72 | 39 | 2 | 18 | 88 | 14 | 84 | 2.10e-14 | 63.5 |
| MsG0880042948.01.T01 | AT4G34750 | 39.474 | 76 | 44 | 1 | 19 | 94 | 29 | 102 | 3.28e-14 | 64.7 |
| MsG0880042948.01.T01 | AT4G34750 | 39.474 | 76 | 44 | 1 | 19 | 94 | 29 | 102 | 3.28e-14 | 64.7 |
| MsG0880042948.01.T01 | AT1G56150 | 43.836 | 73 | 34 | 2 | 27 | 94 | 38 | 108 | 3.98e-14 | 63.5 |
| MsG0880042948.01.T01 | AT4G34800 | 49.275 | 69 | 33 | 2 | 19 | 85 | 13 | 81 | 4.75e-14 | 62.8 |
| MsG0880042948.01.T01 | AT5G18060 | 48.387 | 62 | 30 | 2 | 28 | 88 | 25 | 85 | 5.40e-14 | 62.4 |
| MsG0880042948.01.T01 | AT4G38840 | 53.333 | 60 | 26 | 2 | 27 | 85 | 33 | 91 | 6.38e-14 | 62.4 |
| MsG0880042948.01.T01 | AT5G18030 | 38.961 | 77 | 45 | 2 | 13 | 88 | 8 | 83 | 9.54e-14 | 61.6 |
| MsG0880042948.01.T01 | AT3G03820 | 48.529 | 68 | 33 | 2 | 27 | 92 | 27 | 94 | 2.30e-13 | 61.2 |
| MsG0880042948.01.T01 | AT1G16510 | 44.118 | 68 | 36 | 1 | 21 | 88 | 48 | 113 | 3.11e-13 | 62.0 |
| MsG0880042948.01.T01 | AT3G20220 | 44.444 | 63 | 34 | 1 | 26 | 88 | 46 | 107 | 3.27e-13 | 61.2 |
| MsG0880042948.01.T01 | AT2G21220 | 42.424 | 66 | 36 | 1 | 27 | 92 | 40 | 103 | 3.72e-13 | 60.8 |
| MsG0880042948.01.T01 | AT1G79130 | 43.750 | 64 | 34 | 1 | 25 | 88 | 46 | 107 | 4.94e-13 | 61.2 |
| MsG0880042948.01.T01 | AT2G21200 | 47.541 | 61 | 30 | 2 | 26 | 85 | 20 | 79 | 5.74e-13 | 59.7 |
| MsG0880042948.01.T01 | AT4G34810 | 50.000 | 62 | 28 | 2 | 27 | 85 | 48 | 109 | 5.91e-13 | 60.5 |
| MsG0880042948.01.T01 | AT5G66260 | 40.845 | 71 | 40 | 1 | 23 | 93 | 30 | 98 | 9.64e-13 | 59.7 |
| MsG0880042948.01.T01 | AT4G13790 | 42.647 | 68 | 38 | 1 | 26 | 92 | 24 | 91 | 1.05e-12 | 59.3 |
| MsG0880042948.01.T01 | AT4G34760 | 42.424 | 66 | 36 | 1 | 27 | 92 | 43 | 106 | 2.15e-12 | 58.9 |
| MsG0880042948.01.T01 | AT5G18010 | 43.077 | 65 | 35 | 2 | 25 | 88 | 22 | 85 | 2.64e-12 | 58.2 |
| MsG0880042948.01.T01 | AT2G28085 | 47.458 | 59 | 30 | 1 | 31 | 88 | 60 | 118 | 3.88e-12 | 58.5 |
| MsG0880042948.01.T01 | AT1G75580 | 41.791 | 67 | 37 | 1 | 26 | 92 | 43 | 107 | 1.27e-11 | 57.0 |
| MsG0880042948.01.T01 | AT5G10990 | 41.429 | 70 | 39 | 1 | 27 | 96 | 41 | 108 | 1.44e-11 | 57.8 |
| MsG0880042948.01.T01 | AT1G19840 | 47.458 | 59 | 29 | 1 | 27 | 85 | 41 | 97 | 2.24e-11 | 57.4 |
| MsG0880042948.01.T01 | AT5G50760 | 41.463 | 82 | 38 | 3 | 22 | 97 | 44 | 121 | 3.97e-11 | 57.0 |
| MsG0880042948.01.T01 | AT4G38860 | 41.791 | 67 | 36 | 2 | 27 | 92 | 40 | 104 | 5.79e-11 | 55.1 |
| MsG0880042948.01.T01 | AT3G03830 | 44.118 | 68 | 36 | 2 | 27 | 92 | 24 | 91 | 6.85e-11 | 54.7 |
Find 20 sgRNAs with CRISPR-Local
Find 23 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAACATGTTGGTTGTTT+TGG | 0.174789 | 8:-16436997 | MsG0880042948.01.T01:CDS |
| TTTATCGCCATAAAACCTTT+TGG | 0.276868 | 8:+16437210 | None:intergenic |
| GAATATGGATTTGATCAAAA+AGG | 0.314878 | 8:-16437093 | MsG0880042948.01.T01:CDS |
| CTATGCAAATGAAGACTCTT+TGG | 0.322112 | 8:+16437270 | None:intergenic |
| AAAGAGGCTGAAGAAGAATA+TGG | 0.340816 | 8:-16437108 | MsG0880042948.01.T01:CDS |
| TTCAATAGTTGAATGAAAAG+AGG | 0.392056 | 8:+16437129 | None:intergenic |
| ATGGCGATAAAAGTTGGTCT+AGG | 0.406481 | 8:-16437198 | MsG0880042948.01.T01:CDS |
| TTTCATTCAACTATTGAAAG+AGG | 0.435042 | 8:-16437124 | MsG0880042948.01.T01:CDS |
| TGGCGATAAAAGTTGGTCTA+GGG | 0.473696 | 8:-16437197 | MsG0880042948.01.T01:CDS |
| TACTATTCCTTGTCATGTTG+AGG | 0.479799 | 8:-16437064 | MsG0880042948.01.T01:CDS |
| GAGTTCAAAGGTGTTCCAAA+AGG | 0.492578 | 8:-16437225 | MsG0880042948.01.T01:CDS |
| ACAACAAAGGTTTGTTGTGC+CGG | 0.497789 | 8:-16437169 | MsG0880042948.01.T01:CDS |
| TCAATAGTTGAATGAAAAGA+GGG | 0.540406 | 8:+16437130 | None:intergenic |
| GAGGAATTTAGAAACGTTCG+TGG | 0.549061 | 8:-16437045 | MsG0880042948.01.T01:CDS |
| CTAAATTCCTCAACATGACA+AGG | 0.555962 | 8:+16437057 | None:intergenic |
| CAACATAAGCAAGAGTTCAA+AGG | 0.569608 | 8:-16437237 | MsG0880042948.01.T01:CDS |
| AACATGACAAGGAATAGTAA+TGG | 0.599614 | 8:+16437068 | None:intergenic |
| GGCGATAAAAGTTGGTCTAG+GGG | 0.616753 | 8:-16437196 | MsG0880042948.01.T01:CDS |
| GGGTGATTGAAGTACATCAC+CGG | 0.643631 | 8:+16437150 | None:intergenic |
| GTCTAGGGGAAGAACAACAA+AGG | 0.657155 | 8:-16437182 | MsG0880042948.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAAATCTTCATCAACATGT+TGG | - | Chr8:16437275-16437294 | MsG0880042948.01.T01:CDS | 25.0% |
| ! | GAATATGGATTTGATCAAAA+AGG | - | Chr8:16437188-16437207 | MsG0880042948.01.T01:CDS | 25.0% |
| ! | TCAATAGTTGAATGAAAAGA+GGG | + | Chr8:16437154-16437173 | None:intergenic | 25.0% |
| ! | TTCAATAGTTGAATGAAAAG+AGG | + | Chr8:16437155-16437174 | None:intergenic | 25.0% |
| ! | TTTCATTCAACTATTGAAAG+AGG | - | Chr8:16437157-16437176 | MsG0880042948.01.T01:CDS | 25.0% |
| AACATGACAAGGAATAGTAA+TGG | + | Chr8:16437216-16437235 | None:intergenic | 30.0% | |
| ! | TTTATCGCCATAAAACCTTT+TGG | + | Chr8:16437074-16437093 | None:intergenic | 30.0% |
| AAAGAGGCTGAAGAAGAATA+TGG | - | Chr8:16437173-16437192 | MsG0880042948.01.T01:CDS | 35.0% | |
| CAACATAAGCAAGAGTTCAA+AGG | - | Chr8:16437044-16437063 | MsG0880042948.01.T01:CDS | 35.0% | |
| CTAAATTCCTCAACATGACA+AGG | + | Chr8:16437227-16437246 | None:intergenic | 35.0% | |
| CTATGCAAATGAAGACTCTT+TGG | + | Chr8:16437014-16437033 | None:intergenic | 35.0% | |
| TACTATTCCTTGTCATGTTG+AGG | - | Chr8:16437217-16437236 | MsG0880042948.01.T01:CDS | 35.0% | |
| ! | AGGTGTTCCAAAAGGTTTTA+TGG | - | Chr8:16437064-16437083 | MsG0880042948.01.T01:CDS | 35.0% |
| !! | CATCAACATGTTGGTTGTTT+TGG | - | Chr8:16437284-16437303 | MsG0880042948.01.T01:CDS | 35.0% |
| !! | GGTTTTATGGCGATAAAAGT+TGG | - | Chr8:16437077-16437096 | MsG0880042948.01.T01:CDS | 35.0% |
| GAGGAATTTAGAAACGTTCG+TGG | - | Chr8:16437236-16437255 | MsG0880042948.01.T01:CDS | 40.0% | |
| ! | ATGGCGATAAAAGTTGGTCT+AGG | - | Chr8:16437083-16437102 | MsG0880042948.01.T01:CDS | 40.0% |
| ! | TGGCGATAAAAGTTGGTCTA+GGG | - | Chr8:16437084-16437103 | MsG0880042948.01.T01:CDS | 40.0% |
| !! | ACAACAAAGGTTTGTTGTGC+CGG | - | Chr8:16437112-16437131 | MsG0880042948.01.T01:CDS | 40.0% |
| !! | GAGTTCAAAGGTGTTCCAAA+AGG | - | Chr8:16437056-16437075 | MsG0880042948.01.T01:CDS | 40.0% |
| GGGTGATTGAAGTACATCAC+CGG | + | Chr8:16437134-16437153 | None:intergenic | 45.0% | |
| GTCTAGGGGAAGAACAACAA+AGG | - | Chr8:16437099-16437118 | MsG0880042948.01.T01:CDS | 45.0% | |
| ! | GGCGATAAAAGTTGGTCTAG+GGG | - | Chr8:16437085-16437104 | MsG0880042948.01.T01:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 16436990 | 16437313 | 16436990 | ID=MsG0880042948.01;Name=MsG0880042948.01 |
| Chr8 | mRNA | 16436990 | 16437313 | 16436990 | ID=MsG0880042948.01.T01;Parent=MsG0880042948.01;Name=MsG0880042948.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|107 |
| Chr8 | exon | 16436990 | 16437313 | 16436990 | ID=MsG0880042948.01.T01:exon:4320;Parent=MsG0880042948.01.T01 |
| Chr8 | CDS | 16436990 | 16437313 | 16436990 | ID=MsG0880042948.01.T01:cds;Parent=MsG0880042948.01.T01 |
| Gene Sequence |
| Protein sequence |
