Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031160 | sp|Q9SGU9|MGL_ARATH | 74.299 | 428 | 104 | 2 | 19 | 443 | 17 | 441 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031160 | Msa0078460 | 0.922547 | 8.536786e-89 | -8.615850e-47 |
| Msa0031160 | Msa0126170 | 0.829476 | 5.038996e-55 | -8.615850e-47 |
| Msa0031160 | Msa0143630 | 0.802279 | 6.049123e-49 | -8.615850e-47 |
| Msa0031160 | Msa0171100 | 0.807120 | 5.901777e-50 | -8.615850e-47 |
| Msa0031160 | Msa0374790 | 0.814684 | 1.358831e-51 | -8.615850e-47 |
| Msa0031160 | Msa0415990 | 0.815897 | 7.306601e-52 | -8.615850e-47 |
| Msa0031160 | Msa0424000 | 0.807390 | 5.174309e-50 | -8.615850e-47 |
| Msa0031160 | Msa0480330 | 0.814229 | 1.713161e-51 | -8.615850e-47 |
| Msa0031160 | Msa0580850 | 0.810423 | 1.161034e-50 | -8.615850e-47 |
| Msa0031160 | Msa0982380 | 0.809665 | 1.690943e-50 | -8.615850e-47 |
| Msa0031160 | Msa1217950 | 0.802056 | 6.724885e-49 | -8.615850e-47 |
| Msa0031160 | Msa1462640 | 0.816146 | 6.426892e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031160 | MtrunA17_Chr1g0189071 | 97.124 | 452 | 11 | 1 | 1 | 452 | 1 | 450 | 0.0 | 910 |
| Msa0031160 | MtrunA17_Chr3g0119851 | 77.143 | 420 | 95 | 1 | 26 | 445 | 23 | 441 | 0.0 | 662 |
| Msa0031160 | MtrunA17_Chr6g0453481 | 30.114 | 352 | 227 | 9 | 92 | 437 | 134 | 472 | 8.67e-41 | 152 |
| Msa0031160 | MtrunA17_Chr7g0217761 | 29.042 | 334 | 221 | 8 | 95 | 424 | 196 | 517 | 2.58e-37 | 143 |
| Msa0031160 | MtrunA17_Chr1g0181151 | 27.296 | 392 | 247 | 13 | 42 | 424 | 86 | 448 | 9.49e-35 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031160 | AT1G64660.1 | 74.299 | 428 | 104 | 2 | 19 | 443 | 17 | 441 | 0.0 | 644 |
| Msa0031160 | AT3G01120.1 | 33.731 | 335 | 204 | 8 | 95 | 424 | 224 | 545 | 1.56e-49 | 177 |
| Msa0031160 | AT1G33320.2 | 30.861 | 337 | 214 | 9 | 93 | 424 | 33 | 355 | 1.34e-42 | 154 |
| Msa0031160 | AT1G33320.1 | 30.861 | 337 | 214 | 9 | 93 | 424 | 72 | 394 | 2.61e-42 | 155 |
| Msa0031160 | AT1G33320.3 | 30.435 | 322 | 205 | 9 | 108 | 424 | 3 | 310 | 3.78e-37 | 139 |
| Msa0031160 | AT3G57050.4 | 29.745 | 353 | 220 | 10 | 79 | 424 | 57 | 388 | 2.14e-35 | 135 |
| Msa0031160 | AT3G57050.5 | 29.462 | 353 | 221 | 10 | 79 | 424 | 35 | 366 | 2.82e-35 | 135 |
| Msa0031160 | AT3G57050.2 | 29.745 | 353 | 220 | 10 | 79 | 424 | 98 | 429 | 5.64e-35 | 135 |
| Msa0031160 | AT3G57050.1 | 29.745 | 353 | 220 | 10 | 79 | 424 | 113 | 444 | 6.44e-35 | 135 |
| Msa0031160 | AT3G57050.3 | 32.609 | 276 | 168 | 8 | 79 | 346 | 113 | 378 | 1.17e-33 | 130 |
Find 152 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGTTCAAATGCTATTT+TGG | 0.073928 | 1_1:-57795276 | None:intergenic |
| AAAGTGATTCAATTCTTATT+AGG | 0.168129 | 1_1:-57795752 | None:intergenic |
| TTGCAAAACTATGGACAATT+TGG | 0.197366 | 1_1:+57795524 | Msa0031160:CDS |
| AACATGCGTCGGAGAGTTTC+TGG | 0.220883 | 1_1:-57790090 | None:intergenic |
| CGCTTGGCGGTTGCGGTGGC+GGG | 0.228790 | 1_1:-57789898 | None:intergenic |
| TCGCTTGGCGGTTGCGGTGG+CGG | 0.232225 | 1_1:-57789899 | None:intergenic |
| CATGATGTGGATGGTCTTCT+AGG | 0.248249 | 1_1:-57795403 | None:intergenic |
| AAGTGATTCAATTCTTATTA+GGG | 0.263216 | 1_1:-57795751 | None:intergenic |
| CTATGGACAATTTGGTTTCA+TGG | 0.269872 | 1_1:+57795532 | Msa0031160:CDS |
| TGGTTTCATGGCTGTTAGTT+TGG | 0.281840 | 1_1:+57795544 | Msa0031160:CDS |
| ATGAGCTATTTGCAAAACTA+TGG | 0.283875 | 1_1:+57795515 | Msa0031160:CDS |
| GTATCTAGACTTCAAGAATA+TGG | 0.292860 | 1_1:+57795725 | Msa0031160:CDS |
| ATAGAATTCACTAGGCTTGC+AGG | 0.296762 | 1_1:-57795203 | None:intergenic |
| TTCATCAACCATTTCAATAT+CGG | 0.310566 | 1_1:-57790391 | None:intergenic |
| AGGATGTCAATAGGGTATAT+TGG | 0.322482 | 1_1:+57795665 | Msa0031160:CDS |
| TGTTGGTCCTAATAGCATTA+TGG | 0.326242 | 1_1:-57795246 | None:intergenic |
| TCTGAGGAAAAGGTTCTTGC+TGG | 0.335620 | 1_1:+57795623 | Msa0031160:CDS |
| GGTTTCATGGCTGTTAGTTT+GGG | 0.336700 | 1_1:+57795545 | Msa0031160:CDS |
| GAAACACTTATGTCTTGTTC+TGG | 0.350339 | 1_1:+57795575 | Msa0031160:CDS |
| CAAGGGGCCATAATGCTATT+AGG | 0.360521 | 1_1:+57795239 | Msa0031160:CDS |
| CCATTAGACGGCTGAGGTTA+AGG | 0.367268 | 1_1:-57790176 | None:intergenic |
| TTGGAGGATTGCGGCGGAAA+TGG | 0.369797 | 1_1:-57790250 | None:intergenic |
| CGCATGTTCGCCGGAGAGTT+AGG | 0.381110 | 1_1:+57790105 | Msa0031160:CDS |
| CTCGATACGGTTTCGCTTGG+CGG | 0.381954 | 1_1:-57789911 | None:intergenic |
| CTTGGCGGTTGCGGTGGCGG+GGG | 0.384494 | 1_1:-57789896 | None:intergenic |
| CCTTAACCTCAGCCGTCTAA+TGG | 0.390905 | 1_1:+57790176 | Msa0031160:CDS |
| TTGGGACTTTGGAGCAGAAA+TGG | 0.390914 | 1_1:+57795684 | Msa0031160:CDS |
| TCAATTCACAACAAAGACTA+TGG | 0.391666 | 1_1:+57795437 | Msa0031160:CDS |
| TGCTATGTTCTTTCATCCTT+AGG | 0.394998 | 1_1:-57795319 | None:intergenic |
| GGTGGGGCAGATATCATTGC+AGG | 0.399765 | 1_1:+57790621 | Msa0031160:CDS |
| GGATGTCAATAGGGTATATT+GGG | 0.402478 | 1_1:+57795666 | Msa0031160:CDS |
| GCCAGCGCACGACACGAATT+CGG | 0.408975 | 1_1:+57790009 | Msa0031160:CDS |
| CGAATATACCGGAGTTATGT+AGG | 0.411012 | 1_1:+57790481 | Msa0031160:CDS |
| CACAACAAAGACTATGGTTA+TGG | 0.412875 | 1_1:+57795443 | Msa0031160:CDS |
| GCCGAATTCGTGTCGTGCGC+TGG | 0.420373 | 1_1:-57790010 | None:intergenic |
| GGTCTTGTGAGGATGTCAAT+AGG | 0.421102 | 1_1:+57795656 | Msa0031160:CDS |
| CGCTGGCTAGTGAGGTGGCT+GGG | 0.428885 | 1_1:-57789993 | None:intergenic |
| AATAGGGTATATTGGGACTT+TGG | 0.430260 | 1_1:+57795673 | Msa0031160:CDS |
| TGAGATTTCCGATATTGAAA+TGG | 0.430871 | 1_1:+57790383 | Msa0031160:CDS |
| GCTTGGCGGTTGCGGTGGCG+GGG | 0.437853 | 1_1:-57789897 | None:intergenic |
| TGAGTTGAATTCTGAGGAAA+AGG | 0.445451 | 1_1:+57795613 | Msa0031160:CDS |
| ATCAGTCTCAAACCCTACTT+TGG | 0.450586 | 1_1:+57790452 | Msa0031160:CDS |
| TTAAATAAAGCTTGATCAGA+TGG | 0.471474 | 1_1:+57795902 | Msa0031160:three_prime_UTR |
| GCGCTGGCTAGTGAGGTGGC+TGG | 0.471615 | 1_1:-57789994 | None:intergenic |
| TACTATGTATCTAGCAAGAA+AGG | 0.476158 | 1_1:-57789772 | None:intergenic |
| GTCTTGTGAGGATGTCAATA+GGG | 0.477443 | 1_1:+57795657 | Msa0031160:CDS |
| TGAAGCTACCACGTGTTCTC+CGG | 0.481599 | 1_1:-57790283 | None:intergenic |
| TTTGGGTTTCGTCCTCGATA+CGG | 0.482128 | 1_1:-57789924 | None:intergenic |
| GTCCTCGATACGGTTTCGCT+TGG | 0.487725 | 1_1:-57789914 | None:intergenic |
| ACGGTTTCGCTTGGCGGTTG+CGG | 0.488763 | 1_1:-57789905 | None:intergenic |
| GAAAGGTGTGACGGTGGTGG+TGG | 0.489400 | 1_1:+57790515 | Msa0031160:CDS |
| ATATTCGCCACCGCCAAAGT+AGG | 0.490127 | 1_1:-57790465 | None:intergenic |
| CTAATAGCATTATGGCCCCT+TGG | 0.496849 | 1_1:-57795238 | None:intergenic |
| ATCCTCCAACTCACCTCCAC+CGG | 0.506127 | 1_1:+57790264 | Msa0031160:CDS |
| TGTGGATGGTCTTCTAGGCC+AGG | 0.509408 | 1_1:-57795398 | None:intergenic |
| TTTGGCGGTGGCGAATATAC+CGG | 0.512609 | 1_1:+57790470 | Msa0031160:CDS |
| GTGATTTCGCCGGTGAAGCT+TGG | 0.515648 | 1_1:+57790558 | Msa0031160:CDS |
| TATTATCGAAGGGAAAACTA+AGG | 0.516287 | 1_1:+57790416 | Msa0031160:CDS |
| GAAATGGAATCAGCTTGAAA+AGG | 0.516409 | 1_1:+57795700 | Msa0031160:CDS |
| CTAGCAACTGCTACACAAAA+CGG | 0.521813 | 1_1:+57789958 | Msa0031160:CDS |
| GAATCCCTCACTTAGGCCTA+AGG | 0.525026 | 1_1:+57795303 | Msa0031160:CDS |
| GTTCTCCGGTGGAGGTGAGT+TGG | 0.527093 | 1_1:-57790269 | None:intergenic |
| CGACACGAATTCGGCGAACA+CGG | 0.527483 | 1_1:+57790018 | Msa0031160:CDS |
| CTCCGGTGGAGGTGAGTTGG+AGG | 0.531396 | 1_1:-57790266 | None:intergenic |
| GTTCTTGCTGGAATTTCACC+AGG | 0.532752 | 1_1:+57795635 | Msa0031160:CDS |
| GGAAATGGCGGACATGCCGC+TGG | 0.533437 | 1_1:-57790235 | None:intergenic |
| TCGGAAAGGTGTGACGGTGG+TGG | 0.537491 | 1_1:+57790512 | Msa0031160:CDS |
| CTCTCGAAGTACATCAGTGG+TGG | 0.539679 | 1_1:+57790603 | Msa0031160:CDS |
| TTATGTTGTGTGTGATATGA+AGG | 0.543071 | 1_1:+57795852 | Msa0031160:three_prime_UTR |
| ATAGCATTATGGCCCCTTGG+TGG | 0.543434 | 1_1:-57795235 | None:intergenic |
| ACATCAGCACCAAGCTTCAC+CGG | 0.543561 | 1_1:-57790567 | None:intergenic |
| CTCAGTAACATTCACCGTCA+TGG | 0.545248 | 1_1:+57790065 | Msa0031160:CDS |
| TAATTAACAGGAGCAGTATG+TGG | 0.546525 | 1_1:+57795179 | Msa0031160:intron |
| GGACGGTAGGGTTGAAGTGA+CGG | 0.548416 | 1_1:-57790155 | None:intergenic |
| CTCAAACCCTACTTTGGCGG+TGG | 0.548650 | 1_1:+57790458 | Msa0031160:CDS |
| GTGGATGGTCTTCTAGGCCA+GGG | 0.553045 | 1_1:-57795397 | None:intergenic |
| CGTCTAATGGCCGCTCTCGA+AGG | 0.553215 | 1_1:+57790189 | Msa0031160:CDS |
| TATTCGCCACCGCCAAAGTA+GGG | 0.554993 | 1_1:-57790464 | None:intergenic |
| GATTTCAACAATTCATGATG+TGG | 0.554996 | 1_1:-57795416 | None:intergenic |
| TACTCCGATGGTGATTTCGC+CGG | 0.555011 | 1_1:+57790548 | Msa0031160:CDS |
| GGCTGAGGTTAAGGACGGTA+GGG | 0.556203 | 1_1:-57790167 | None:intergenic |
| AGTCTCAAACCCTACTTTGG+CGG | 0.558714 | 1_1:+57790455 | Msa0031160:CDS |
| CGGCTGAGGTTAAGGACGGT+AGG | 0.559706 | 1_1:-57790168 | None:intergenic |
| GTTGATGAAGCTATTATCGA+AGG | 0.560149 | 1_1:+57790405 | Msa0031160:CDS |
| TCAACAATTCATGATGTGGA+TGG | 0.562975 | 1_1:-57795412 | None:intergenic |
| GTTTCGCTTGGCGGTTGCGG+TGG | 0.564473 | 1_1:-57789902 | None:intergenic |
| GGAGGTGAGTTGGAGGATTG+CGG | 0.565483 | 1_1:-57790259 | None:intergenic |
| ACTCTCCGACGCATGTTCGC+CGG | 0.566934 | 1_1:+57790096 | Msa0031160:CDS |
| TGAGGTGGCTGGGTCGAAGA+CGG | 0.567736 | 1_1:-57789983 | None:intergenic |
| GCCGCTTACTGCACATCCAG+CGG | 0.567953 | 1_1:+57790219 | Msa0031160:CDS |
| TCTCGAAGTACATCAGTGGT+GGG | 0.570569 | 1_1:+57790604 | Msa0031160:CDS |
| GCCGCTGGATGTGCAGTAAG+CGG | 0.571507 | 1_1:-57790220 | None:intergenic |
| TAGACGAAGAAATCACGGTC+TGG | 0.573430 | 1_1:-57790129 | None:intergenic |
| AAGCCTAGTGAATTCTATGA+TGG | 0.575958 | 1_1:+57795208 | Msa0031160:CDS |
| CTTCGAGAGCGGCCATTAGA+CGG | 0.578957 | 1_1:-57790188 | None:intergenic |
| TGGACTTCTTTGCATTGACA+TGG | 0.579725 | 1_1:+57795466 | Msa0031160:CDS |
| TACCACGTGTTCTCCGGTGG+AGG | 0.582415 | 1_1:-57790277 | None:intergenic |
| GAATATACCGGAGTTATGTA+GGG | 0.582685 | 1_1:+57790482 | Msa0031160:CDS |
| AACAAAGACTATGGTTATGG+TGG | 0.583091 | 1_1:+57795446 | Msa0031160:CDS |
| GTCAGCCATGGGTTTAGTGT+AGG | 0.583644 | 1_1:-57789848 | None:intergenic |
| CTATGATGGATCTCCACCAA+GGG | 0.585796 | 1_1:+57795222 | Msa0031160:CDS |
| ATTGACATCCTCACAAGACC+TGG | 0.585919 | 1_1:-57795653 | None:intergenic |
| GAATTTCACCAGGTCTTGTG+AGG | 0.587396 | 1_1:+57795645 | Msa0031160:CDS |
| TGTAGGGTGGCGCATCGGAA+AGG | 0.590254 | 1_1:+57790498 | Msa0031160:CDS |
| TCAGAAAGAATCCCTCACTT+AGG | 0.590587 | 1_1:+57795296 | Msa0031160:CDS |
| GGCGCATCGGAAAGGTGTGA+CGG | 0.593531 | 1_1:+57790506 | Msa0031160:CDS |
| CATAAGGAAAGTGTCAGCCA+TGG | 0.596216 | 1_1:-57789860 | None:intergenic |
| GGATTCAAGGTAATCTACCC+TGG | 0.598316 | 1_1:+57795380 | Msa0031160:CDS |
| AGCTACCACGTGTTCTCCGG+TGG | 0.598359 | 1_1:-57790280 | None:intergenic |
| GAGAGTTTCTGGTTCCATGA+CGG | 0.598458 | 1_1:-57790079 | None:intergenic |
| GAGGATTGCGGCGGAAATGG+CGG | 0.601765 | 1_1:-57790247 | None:intergenic |
| ATAAGGAAAGTGTCAGCCAT+GGG | 0.602885 | 1_1:-57789859 | None:intergenic |
| TCGTGCGCTGGCTAGTGAGG+TGG | 0.602922 | 1_1:-57789998 | None:intergenic |
| ATGGGTTTAGTGTAGGAAAG+TGG | 0.605599 | 1_1:-57789841 | None:intergenic |
| GTTGTTATGTTGCATGTACG+TGG | 0.609929 | 1_1:-57790351 | None:intergenic |
| TCATCCTTAGGCCTAAGTGA+GGG | 0.616919 | 1_1:-57795307 | None:intergenic |
| GTAGCTTCAAGAACACTCTA+CGG | 0.618404 | 1_1:+57790297 | Msa0031160:CDS |
| TGTGATATGAAGGACATTGA+AGG | 0.618625 | 1_1:+57795862 | Msa0031160:three_prime_UTR |
| CACCTCCACCGGAGAACACG+TGG | 0.620711 | 1_1:+57790275 | Msa0031160:CDS |
| GATCCATCATAGAATTCACT+AGG | 0.624444 | 1_1:-57795211 | None:intergenic |
| GAGCGGCCATTAGACGGCTG+AGG | 0.624779 | 1_1:-57790182 | None:intergenic |
| GATCAAGCTTTATTTAAACA+AGG | 0.628746 | 1_1:-57795896 | None:intergenic |
| TTCATCCTTAGGCCTAAGTG+AGG | 0.628773 | 1_1:-57795308 | None:intergenic |
| AGTTATGTAGGGTGGCGCAT+CGG | 0.629436 | 1_1:+57790493 | Msa0031160:CDS |
| ATCGGAAATCTCAACGAACG+TGG | 0.632380 | 1_1:-57790373 | None:intergenic |
| CTCGAAGTACATCAGTGGTG+GGG | 0.632514 | 1_1:+57790605 | Msa0031160:CDS |
| ACTTTCCTACACTAAACCCA+TGG | 0.633686 | 1_1:+57789843 | Msa0031160:exon |
| TCTATGATGGATCTCCACCA+AGG | 0.633733 | 1_1:+57795221 | Msa0031160:CDS |
| ACTCTCCGGCGAACATGCGT+CGG | 0.635084 | 1_1:-57790101 | None:intergenic |
| GGCTGTAGACGAAGAAATCA+CGG | 0.636097 | 1_1:-57790134 | None:intergenic |
| ACGGTCTGGACCTAACTCTC+CGG | 0.637564 | 1_1:-57790115 | None:intergenic |
| GTGTCGTGCGCTGGCTAGTG+AGG | 0.640001 | 1_1:-57790001 | None:intergenic |
| ATGACGGTGAATGTTACTGA+GGG | 0.640177 | 1_1:-57790063 | None:intergenic |
| AATTAACAGGAGCAGTATGT+GGG | 0.640948 | 1_1:+57795180 | Msa0031160:intron |
| TTGATGAAGCTATTATCGAA+GGG | 0.644569 | 1_1:+57790406 | Msa0031160:CDS |
| TAGTAGTGAGTTGAATTCTG+AGG | 0.646330 | 1_1:+57795607 | Msa0031160:CDS |
| CATGACGGTGAATGTTACTG+AGG | 0.648377 | 1_1:-57790064 | None:intergenic |
| GGCTTCTGTACCTTCGAGAG+CGG | 0.650176 | 1_1:-57790199 | None:intergenic |
| TGCGCCACCCTACATAACTC+CGG | 0.657885 | 1_1:-57790489 | None:intergenic |
| CGCCAAGCGAAACCGTATCG+AGG | 0.669178 | 1_1:+57789912 | Msa0031160:CDS |
| TTCACCGGCGAAATCACCAT+CGG | 0.669207 | 1_1:-57790552 | None:intergenic |
| TGGTGATTAGTATCACAAAG+TGG | 0.671303 | 1_1:-57789821 | None:intergenic |
| TTGTTGCAAACACTAACGCA+CGG | 0.672812 | 1_1:-57795343 | None:intergenic |
| GTGATATGAAGGACATTGAA+GGG | 0.675849 | 1_1:+57795863 | Msa0031160:three_prime_UTR |
| TAGACGGCTGAGGTTAAGGA+CGG | 0.676675 | 1_1:-57790172 | None:intergenic |
| GCATCGGAAAGGTGTGACGG+TGG | 0.682253 | 1_1:+57790509 | Msa0031160:CDS |
| TATACCGGAGTTATGTAGGG+TGG | 0.687231 | 1_1:+57790485 | Msa0031160:CDS |
| GCTTCAAGAACACTCTACGG+TGG | 0.691366 | 1_1:+57790300 | Msa0031160:CDS |
| GGTGAGTTGGAGGATTGCGG+CGG | 0.695048 | 1_1:-57790256 | None:intergenic |
| AGTCTCTCGAAGTACATCAG+TGG | 0.697937 | 1_1:+57790600 | Msa0031160:CDS |
| TATGATGGATCTCCACCAAG+GGG | 0.715539 | 1_1:+57795223 | Msa0031160:CDS |
| CACGAATTCGGCGAACACGG+CGG | 0.723929 | 1_1:+57790021 | Msa0031160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTAATAATTTAGTATATA+CGG | - | chr1_1:57791186-57791205 | None:intergenic | 10.0% |
| !!! | AAAAAATGTGATTTTAATTA+AGG | + | chr1_1:57791843-57791862 | Msa0031160:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1_1:57792491-57792510 | Msa0031160:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr1_1:57792492-57792511 | Msa0031160:intron | 10.0% |
| !!! | TATGAATTTACTTTAAAAAA+GGG | - | chr1_1:57793329-57793348 | None:intergenic | 10.0% |
| !!! | ATATGAATTTACTTTAAAAA+AGG | - | chr1_1:57793330-57793349 | None:intergenic | 10.0% |
| !!! | TATAATATTTTGAATTTTTC+TGG | - | chr1_1:57793382-57793401 | None:intergenic | 10.0% |
| !!! | AAAAAATTCTGAATTTTTTT+TGG | - | chr1_1:57793414-57793433 | None:intergenic | 10.0% |
| !!! | GTTTGTTTTTTATTTTTTTT+CGG | - | chr1_1:57794133-57794152 | None:intergenic | 10.0% |
| !! | TAACAAAAAAAATAAAAAAC+AGG | - | chr1_1:57794334-57794353 | None:intergenic | 10.0% |
| !! | TTGAATAATAAGTGTAAATA+TGG | - | chr1_1:57791014-57791033 | None:intergenic | 15.0% |
| !!! | CTATTTTTTTTAAACTCATT+AGG | + | chr1_1:57791302-57791321 | Msa0031160:intron | 15.0% |
| !!! | TTTGTCAACATATTTTTAAA+TGG | + | chr1_1:57791402-57791421 | Msa0031160:intron | 15.0% |
| !!! | TAAGTTTTTTTTTTTGTTTG+AGG | + | chr1_1:57791451-57791470 | Msa0031160:intron | 15.0% |
| !!! | AAAATTTGTTATGAGAAAAT+TGG | - | chr1_1:57791651-57791670 | None:intergenic | 15.0% |
| !!! | ACAAATCAATAATTTTTCAT+TGG | - | chr1_1:57792072-57792091 | None:intergenic | 15.0% |
| !!! | TGTATATTTTAAAAGAAATG+AGG | + | chr1_1:57792277-57792296 | Msa0031160:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr1_1:57792493-57792512 | Msa0031160:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | + | chr1_1:57792516-57792535 | Msa0031160:intron | 15.0% |
| !! | TATTTACTGTTATATTGTAT+TGG | + | chr1_1:57792556-57792575 | Msa0031160:intron | 15.0% |
| !! | ATTTACTGTTATATTGTATT+GGG | + | chr1_1:57792557-57792576 | Msa0031160:intron | 15.0% |
| !!! | AATATTACACATTTTTTCAA+AGG | + | chr1_1:57792945-57792964 | Msa0031160:intron | 15.0% |
| !! | AATTATATCTTGTAAAAGAA+AGG | + | chr1_1:57793194-57793213 | Msa0031160:intron | 15.0% |
| !! | ATTATATCTTGTAAAAGAAA+GGG | + | chr1_1:57793195-57793214 | Msa0031160:intron | 15.0% |
| !!! | AAATTTTCAATCATTACTTT+TGG | - | chr1_1:57793608-57793627 | None:intergenic | 15.0% |
| !!! | GTAATGATTGAAAATTTTAT+AGG | + | chr1_1:57793611-57793630 | Msa0031160:intron | 15.0% |
| !! | AATAGAAAATTAAGATAAGT+TGG | - | chr1_1:57794586-57794605 | None:intergenic | 15.0% |
| !! | GAAGTAAAACATTTATACTT+AGG | + | chr1_1:57790781-57790800 | Msa0031160:intron | 20.0% |
| !! | CAAATTTAACTATCAAAACA+TGG | + | chr1_1:57791602-57791621 | Msa0031160:intron | 20.0% |
| !!! | AACATGTGTCATATTTTTAT+TGG | - | chr1_1:57791813-57791832 | None:intergenic | 20.0% |
| !!! | TGTGATTTTAATTAAGGAAA+TGG | + | chr1_1:57791849-57791868 | Msa0031160:intron | 20.0% |
| !!! | ATGAGATGTTTGATTTTAAT+TGG | + | chr1_1:57791982-57792001 | Msa0031160:intron | 20.0% |
| !!! | ATGTTTGATTTTAATTGGTT+GGG | + | chr1_1:57791987-57792006 | Msa0031160:intron | 20.0% |
| !! | CACAATGATGTTAATTTATT+AGG | - | chr1_1:57792392-57792411 | None:intergenic | 20.0% |
| !! | AAAATTGTGTCAAACAAATT+AGG | - | chr1_1:57792456-57792475 | None:intergenic | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | + | chr1_1:57792515-57792534 | Msa0031160:intron | 20.0% |
| !! | TAGTATGATATGATATACAA+GGG | - | chr1_1:57792772-57792791 | None:intergenic | 20.0% |
| !! | ATAGTATGATATGATATACA+AGG | - | chr1_1:57792773-57792792 | None:intergenic | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | - | chr1_1:57793238-57793257 | None:intergenic | 20.0% |
| !!! | ACTTTATGAATTTGATGATT+AGG | + | chr1_1:57793851-57793870 | Msa0031160:intron | 20.0% |
| !!! | ACTTTATGAATTTGATGATT+AGG | + | chr1_1:57793851-57793870 | Msa0031160:intron | 20.0% |
| !!! | CATCCTTTATTATTTCTATT+GGG | - | chr1_1:57794051-57794070 | None:intergenic | 20.0% |
| !!! | ACATCCTTTATTATTTCTAT+TGG | - | chr1_1:57794052-57794071 | None:intergenic | 20.0% |
| !!! | ATAATAAAGGATGTTACTTT+AGG | + | chr1_1:57794058-57794077 | Msa0031160:intron | 20.0% |
| !!! | TAATAAAGGATGTTACTTTA+GGG | + | chr1_1:57794059-57794078 | Msa0031160:intron | 20.0% |
| !! | AAACTCCATTTATTATTAGT+GGG | + | chr1_1:57794149-57794168 | Msa0031160:intron | 20.0% |
| !!! | TTGTTTTTAACTACAACTTA+TGG | + | chr1_1:57794879-57794898 | Msa0031160:intron | 20.0% |
| !!! | TGTTTTCTTACTTTTTCTTT+TGG | + | chr1_1:57794952-57794971 | Msa0031160:intron | 20.0% |
| !!! | TTCTTTCTAAGAAACTAAAA+TGG | - | chr1_1:57795065-57795084 | None:intergenic | 20.0% |
| !!! | TTGACTATGATTTTTTCTTT+TGG | + | chr1_1:57795143-57795162 | Msa0031160:intron | 20.0% |
| !!! | GGTTTAAATTGATAATTAAC+AGG | + | chr1_1:57795167-57795186 | Msa0031160:intron | 20.0% |
| !! | ACTAAAAAAATTAGGATTCA+AGG | + | chr1_1:57795367-57795386 | Msa0031160:CDS | 20.0% |
| !! | AAGTGATTCAATTCTTATTA+GGG | - | chr1_1:57795754-57795773 | None:intergenic | 20.0% |
| !! | AAAGTGATTCAATTCTTATT+AGG | - | chr1_1:57795755-57795774 | None:intergenic | 20.0% |
| !!! | TTGAATCACTTTTTAAATCA+TGG | + | chr1_1:57795763-57795782 | Msa0031160:exon | 20.0% |
| !!! | TGAATCACTTTTTAAATCAT+GGG | + | chr1_1:57795764-57795783 | Msa0031160:exon | 20.0% |
| !!! | TCTAGTTGTTTTGAATTGAT+TGG | - | chr1_1:57789752-57789771 | None:intergenic | 25.0% |
| !!! | TGCTAGTTTCTTTTTTGTTT+GGG | - | chr1_1:57789944-57789963 | None:intergenic | 25.0% |
| !!! | TTGCTAGTTTCTTTTTTGTT+TGG | - | chr1_1:57789945-57789964 | None:intergenic | 25.0% |
| ! | TTCATCAACCATTTCAATAT+CGG | - | chr1_1:57790394-57790413 | None:intergenic | 25.0% |
| !! | ATGTATTTTATGCCAAATCT+AGG | + | chr1_1:57791510-57791529 | Msa0031160:intron | 25.0% |
| !! | TGTATTTTATGCCAAATCTA+GGG | + | chr1_1:57791511-57791530 | Msa0031160:intron | 25.0% |
| ! | CAAATTTAACTATCCAAACA+TGG | + | chr1_1:57791547-57791566 | Msa0031160:intron | 25.0% |
| ! | TTGGTATTCGTCAAATAAAA+AGG | - | chr1_1:57791700-57791719 | None:intergenic | 25.0% |
| !! | AACAAATTTTCTCATTGTTC+AGG | + | chr1_1:57791661-57791680 | Msa0031160:intron | 25.0% |
| ! | GTCAAATAAAAAAGAAGACA+TGG | + | chr1_1:57791709-57791728 | Msa0031160:intron | 25.0% |
| !!! | GTGTCATATTTTTATTGGTT+GGG | - | chr1_1:57791808-57791827 | None:intergenic | 25.0% |
| !!! | TGTGTCATATTTTTATTGGT+TGG | - | chr1_1:57791809-57791828 | None:intergenic | 25.0% |
| ! | TAAGGAAATGGAAACATAAA+TGG | + | chr1_1:57791861-57791880 | Msa0031160:intron | 25.0% |
| !!! | TTTTTGTTGGTTAAAGAAAG+TGG | + | chr1_1:57791894-57791913 | Msa0031160:intron | 25.0% |
| !!! | GATGTTTGATTTTAATTGGT+TGG | + | chr1_1:57791986-57792005 | Msa0031160:intron | 25.0% |
| ! | AAATTAACATCATTGTGTTG+TGG | + | chr1_1:57792395-57792414 | Msa0031160:intron | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | + | chr1_1:57792500-57792519 | Msa0031160:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr1_1:57792603-57792622 | Msa0031160:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr1_1:57792604-57792623 | Msa0031160:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr1_1:57792625-57792644 | Msa0031160:intron | 25.0% |
| ! | GTCTATCTAGAGAAAATAAT+TGG | + | chr1_1:57792724-57792743 | Msa0031160:intron | 25.0% |
| ! | GAAAATAATTGGATTGAGAT+TGG | + | chr1_1:57792735-57792754 | Msa0031160:intron | 25.0% |
| ! | TAATATTCAGAAACTAAGGT+GGG | - | chr1_1:57792932-57792951 | None:intergenic | 25.0% |
| ! | TGTGTAATATTCAGAAACTA+AGG | - | chr1_1:57792936-57792955 | None:intergenic | 25.0% |
| !! | GAAAGGGTTAAATATGTTTT+TGG | + | chr1_1:57793211-57793230 | Msa0031160:intron | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | - | chr1_1:57793239-57793258 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr1_1:57793269-57793288 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr1_1:57793270-57793289 | None:intergenic | 25.0% |
| ! | TTATAGGAACTAAAAGTCAA+AGG | + | chr1_1:57793627-57793646 | Msa0031160:intron | 25.0% |
| !! | AAGTCAAAGGAAAATTTTAG+AGG | + | chr1_1:57793640-57793659 | Msa0031160:intron | 25.0% |
| !! | AGTCAAAGGAAAATTTTAGA+GGG | + | chr1_1:57793641-57793660 | Msa0031160:intron | 25.0% |
| !! | TGAATTTGATGATTAGGATT+AGG | + | chr1_1:57793857-57793876 | Msa0031160:intron | 25.0% |
| !! | TGAATTTGATGATTAGGATT+AGG | + | chr1_1:57793857-57793876 | Msa0031160:intron | 25.0% |
| ! | CTTCCCAATAGAAATAATAA+AGG | + | chr1_1:57794045-57794064 | Msa0031160:intron | 25.0% |
| !!! | AATAAAGGATGTTACTTTAG+GGG | + | chr1_1:57794060-57794079 | Msa0031160:intron | 25.0% |
| ! | CAAACTCCATTTATTATTAG+TGG | + | chr1_1:57794148-57794167 | Msa0031160:intron | 25.0% |
| ! | CATGAGATTCAAATTCAATT+TGG | - | chr1_1:57794532-57794551 | None:intergenic | 25.0% |
| ! | AAATTAAGCCACAATCTTAT+TGG | + | chr1_1:57794831-57794850 | Msa0031160:intron | 25.0% |
| !!! | TTTTTAACTACAACTTATGG+TGG | + | chr1_1:57794882-57794901 | Msa0031160:intron | 25.0% |
| !!! | ATATGTGTTGTATTTTGACA+AGG | + | chr1_1:57795116-57795135 | Msa0031160:intron | 25.0% |
| !!! | ACTATGATTTTTTCTTTTGG+TGG | + | chr1_1:57795146-57795165 | Msa0031160:intron | 25.0% |
| !!! | ATAGTTCAAATGCTATTTTG+GGG | - | chr1_1:57795277-57795296 | None:intergenic | 25.0% |
| !!! | GATAGTTCAAATGCTATTTT+GGG | - | chr1_1:57795278-57795297 | None:intergenic | 25.0% |
| !!! | TGATAGTTCAAATGCTATTT+TGG | - | chr1_1:57795279-57795298 | None:intergenic | 25.0% |
| ! | GCAACAAGACTAAAAAAATT+AGG | + | chr1_1:57795359-57795378 | Msa0031160:CDS | 25.0% |
| !!! | GATCAAGCTTTATTTAAACA+AGG | - | chr1_1:57795899-57795918 | None:intergenic | 25.0% |
| ! | TTAAATAAAGCTTGATCAGA+TGG | + | chr1_1:57795902-57795921 | Msa0031160:three_prime_UTR | 25.0% |
| TACTATGTATCTAGCAAGAA+AGG | - | chr1_1:57789775-57789794 | None:intergenic | 30.0% | |
| TGAGATTTCCGATATTGAAA+TGG | + | chr1_1:57790383-57790402 | Msa0031160:CDS | 30.0% | |
| TTGATGAAGCTATTATCGAA+GGG | + | chr1_1:57790406-57790425 | Msa0031160:CDS | 30.0% | |
| TATTATCGAAGGGAAAACTA+AGG | + | chr1_1:57790416-57790435 | Msa0031160:CDS | 30.0% | |
| ATTTATACTTAGGCTCTGTT+TGG | + | chr1_1:57790791-57790810 | Msa0031160:intron | 30.0% | |
| !!! | GAGCTAAAAGCTCTTTTTTT+GGG | - | chr1_1:57790821-57790840 | None:intergenic | 30.0% |
| !!! | AGAGCTAAAAGCTCTTTTTT+TGG | - | chr1_1:57790822-57790841 | None:intergenic | 30.0% |
| TTGACAAAAAAAGCTCTGTT+TGG | + | chr1_1:57790865-57790884 | Msa0031160:intron | 30.0% | |
| ACGAACTTATAGCTTATTTC+AGG | + | chr1_1:57790913-57790932 | Msa0031160:intron | 30.0% | |
| GTACATGTAAGTGATGATTA+AGG | - | chr1_1:57791164-57791183 | None:intergenic | 30.0% | |
| !! | ATGAAAAGCATTACCATGTT+TGG | - | chr1_1:57791563-57791582 | None:intergenic | 30.0% |
| ! | AATTTTCTCATTGTTCAGGT+TGG | + | chr1_1:57791665-57791684 | Msa0031160:intron | 30.0% |
| !! | ATTTTCTCATTGTTCAGGTT+GGG | + | chr1_1:57791666-57791685 | Msa0031160:intron | 30.0% |
| AATGGAAACATAAATGGTGA+TGG | + | chr1_1:57791867-57791886 | Msa0031160:intron | 30.0% | |
| ATGGAAACATAAATGGTGAT+GGG | + | chr1_1:57791868-57791887 | Msa0031160:intron | 30.0% | |
| TTGTGTCAAACAAATTAGGA+CGG | - | chr1_1:57792452-57792471 | None:intergenic | 30.0% | |
| AGAAAATGGATCAGTTATTC+CGG | + | chr1_1:57792639-57792658 | Msa0031160:intron | 30.0% | |
| AATATTCAGAAACTAAGGTG+GGG | - | chr1_1:57792931-57792950 | None:intergenic | 30.0% | |
| GTAATATTCAGAAACTAAGG+TGG | - | chr1_1:57792933-57792952 | None:intergenic | 30.0% | |
| AGGAAAATACATTCCAAGTA+TGG | + | chr1_1:57792965-57792984 | Msa0031160:intron | 30.0% | |
| GGAAAATACATTCCAAGTAT+GGG | + | chr1_1:57792966-57792985 | Msa0031160:intron | 30.0% | |
| AGATATCTGTATGACTGTAT+AGG | - | chr1_1:57793060-57793079 | None:intergenic | 30.0% | |
| TTATAGCGACTAAAAGTTGA+AGG | - | chr1_1:57793283-57793302 | None:intergenic | 30.0% | |
| CAAATTCGGATAGTTTCTTT+AGG | - | chr1_1:57793715-57793734 | None:intergenic | 30.0% | |
| TGTTGCAAGTAAAAGGAAAT+TGG | - | chr1_1:57793820-57793839 | None:intergenic | 30.0% | |
| GATGATTAGGATTAGGATTA+AGG | + | chr1_1:57793921-57793940 | Msa0031160:intron | 30.0% | |
| !! | CATTTATTATTAGTGGGCTA+CGG | + | chr1_1:57794155-57794174 | Msa0031160:intron | 30.0% |
| TGAAAATTCAGCCACTAAAT+GGG | - | chr1_1:57794275-57794294 | None:intergenic | 30.0% | |
| ATGAAAATTCAGCCACTAAA+TGG | - | chr1_1:57794276-57794295 | None:intergenic | 30.0% | |
| ATCCATTGCTCATTTCTATT+CGG | - | chr1_1:57794430-57794449 | None:intergenic | 30.0% | |
| GTATGTTATGTTACTCAAGT+TGG | + | chr1_1:57794482-57794501 | Msa0031160:intron | 30.0% | |
| !! | ACAAGAAGTGTTGAAAATTC+AGG | - | chr1_1:57795010-57795029 | None:intergenic | 30.0% |
| GATTTCAACAATTCATGATG+TGG | - | chr1_1:57795419-57795438 | None:intergenic | 30.0% | |
| TCAATTCACAACAAAGACTA+TGG | + | chr1_1:57795437-57795456 | Msa0031160:CDS | 30.0% | |
| ATGAGCTATTTGCAAAACTA+TGG | + | chr1_1:57795515-57795534 | Msa0031160:CDS | 30.0% | |
| TTGCAAAACTATGGACAATT+TGG | + | chr1_1:57795524-57795543 | Msa0031160:CDS | 30.0% | |
| GTATCTAGACTTCAAGAATA+TGG | + | chr1_1:57795725-57795744 | Msa0031160:CDS | 30.0% | |
| TTATGTTGTGTGTGATATGA+AGG | + | chr1_1:57795852-57795871 | Msa0031160:three_prime_UTR | 30.0% | |
| TGGTGATTAGTATCACAAAG+TGG | - | chr1_1:57789824-57789843 | None:intergenic | 35.0% | |
| ! | GTTGATGAAGCTATTATCGA+AGG | + | chr1_1:57790405-57790424 | Msa0031160:CDS | 35.0% |
| GAATATACCGGAGTTATGTA+GGG | + | chr1_1:57790482-57790501 | Msa0031160:CDS | 35.0% | |
| ! | GGATAATACTTTTACTCCGA+TGG | + | chr1_1:57790536-57790555 | Msa0031160:CDS | 35.0% |
| ! | GATAAGCTAGTTGAAGTGTT+TGG | - | chr1_1:57791061-57791080 | None:intergenic | 35.0% |
| ATGTGTTATAGCCCTAGATT+TGG | - | chr1_1:57791525-57791544 | None:intergenic | 35.0% | |
| AGGTTGGGCAATGAAAAAAT+TGG | + | chr1_1:57791681-57791700 | Msa0031160:intron | 35.0% | |
| GGGTGTAAGAATAATCTCTT+AGG | - | chr1_1:57791788-57791807 | None:intergenic | 35.0% | |
| ! | GTCTGGAATCAAATACCTTA+AGG | - | chr1_1:57792210-57792229 | None:intergenic | 35.0% |
| GCAACTTAGCATATAGTAAG+TGG | + | chr1_1:57792357-57792376 | Msa0031160:intron | 35.0% | |
| GAAAATGGATCAGTTATTCC+GGG | + | chr1_1:57792640-57792659 | Msa0031160:intron | 35.0% | |
| ! | ATTTTCTCTAGATAGACACG+AGG | - | chr1_1:57792721-57792740 | None:intergenic | 35.0% |
| ATATTCAGAAACTAAGGTGG+GGG | - | chr1_1:57792930-57792949 | None:intergenic | 35.0% | |
| GCAAGTAAAAGGAAATTGGT+AGG | - | chr1_1:57793816-57793835 | None:intergenic | 35.0% | |
| TAACACGTGTTGCAAGTAAA+AGG | - | chr1_1:57793827-57793846 | None:intergenic | 35.0% | |
| ATCTCCCAAAAAAATTGTCC+CGG | + | chr1_1:57794091-57794110 | Msa0031160:intron | 35.0% | |
| !!! | TTTCCCGGGACAATTTTTTT+GGG | - | chr1_1:57794098-57794117 | None:intergenic | 35.0% |
| ! | TTTTCCCGGGACAATTTTTT+TGG | - | chr1_1:57794099-57794118 | None:intergenic | 35.0% |
| ! | GGTTATAGCTAAATTTTCCC+GGG | - | chr1_1:57794112-57794131 | None:intergenic | 35.0% |
| ! | CGGTTATAGCTAAATTTTCC+CGG | - | chr1_1:57794113-57794132 | None:intergenic | 35.0% |
| CGTAGCCCACTAATAATAAA+TGG | - | chr1_1:57794157-57794176 | None:intergenic | 35.0% | |
| ATGGGAATTTAGCCACTAAA+TGG | + | chr1_1:57794187-57794206 | Msa0031160:intron | 35.0% | |
| TGGGAATTTAGCCACTAAAT+GGG | + | chr1_1:57794188-57794207 | Msa0031160:intron | 35.0% | |
| ! | GGCTGAATTTTCATGTATTG+TGG | + | chr1_1:57794282-57794301 | Msa0031160:intron | 35.0% |
| ! | ATTTTCATGTATTGTGGCCA+TGG | + | chr1_1:57794288-57794307 | Msa0031160:intron | 35.0% |
| AGGCTCCATTTATTATCAGT+GGG | - | chr1_1:57794314-57794333 | None:intergenic | 35.0% | |
| TTCCGAATAGAAATGAGCAA+TGG | + | chr1_1:57794425-57794444 | Msa0031160:intron | 35.0% | |
| GACACAGTTGTTAACCAAAT+GGG | - | chr1_1:57794742-57794761 | None:intergenic | 35.0% | |
| TTAAGCCACAATCTTATTGG+TGG | + | chr1_1:57794834-57794853 | Msa0031160:intron | 35.0% | |
| TTCAACCACCAATAAGATTG+TGG | - | chr1_1:57794842-57794861 | None:intergenic | 35.0% | |
| CTTCTTGTGCTGAAAATGAA+AGG | + | chr1_1:57795022-57795041 | Msa0031160:intron | 35.0% | |
| TAATTAACAGGAGCAGTATG+TGG | + | chr1_1:57795179-57795198 | Msa0031160:intron | 35.0% | |
| AATTAACAGGAGCAGTATGT+GGG | + | chr1_1:57795180-57795199 | Msa0031160:intron | 35.0% | |
| AAGCCTAGTGAATTCTATGA+TGG | + | chr1_1:57795208-57795227 | Msa0031160:CDS | 35.0% | |
| GATCCATCATAGAATTCACT+AGG | - | chr1_1:57795214-57795233 | None:intergenic | 35.0% | |
| TGTTGGTCCTAATAGCATTA+TGG | - | chr1_1:57795249-57795268 | None:intergenic | 35.0% | |
| TGCTATGTTCTTTCATCCTT+AGG | - | chr1_1:57795322-57795341 | None:intergenic | 35.0% | |
| TCAACAATTCATGATGTGGA+TGG | - | chr1_1:57795415-57795434 | None:intergenic | 35.0% | |
| CACAACAAAGACTATGGTTA+TGG | + | chr1_1:57795443-57795462 | Msa0031160:CDS | 35.0% | |
| AACAAAGACTATGGTTATGG+TGG | + | chr1_1:57795446-57795465 | Msa0031160:CDS | 35.0% | |
| ! | CTATGGACAATTTGGTTTCA+TGG | + | chr1_1:57795532-57795551 | Msa0031160:CDS | 35.0% |
| ! | GAAACACTTATGTCTTGTTC+TGG | + | chr1_1:57795575-57795594 | Msa0031160:CDS | 35.0% |
| ! | TAGTAGTGAGTTGAATTCTG+AGG | + | chr1_1:57795607-57795626 | Msa0031160:CDS | 35.0% |
| ! | TGAGTTGAATTCTGAGGAAA+AGG | + | chr1_1:57795613-57795632 | Msa0031160:CDS | 35.0% |
| AGGATGTCAATAGGGTATAT+TGG | + | chr1_1:57795665-57795684 | Msa0031160:CDS | 35.0% | |
| GGATGTCAATAGGGTATATT+GGG | + | chr1_1:57795666-57795685 | Msa0031160:CDS | 35.0% | |
| AATAGGGTATATTGGGACTT+TGG | + | chr1_1:57795673-57795692 | Msa0031160:CDS | 35.0% | |
| GAAATGGAATCAGCTTGAAA+AGG | + | chr1_1:57795700-57795719 | Msa0031160:CDS | 35.0% | |
| TGTGATATGAAGGACATTGA+AGG | + | chr1_1:57795862-57795881 | Msa0031160:three_prime_UTR | 35.0% | |
| GTGATATGAAGGACATTGAA+GGG | + | chr1_1:57795863-57795882 | Msa0031160:three_prime_UTR | 35.0% | |
| ATGGGTTTAGTGTAGGAAAG+TGG | - | chr1_1:57789844-57789863 | None:intergenic | 40.0% | |
| ACTTTCCTACACTAAACCCA+TGG | + | chr1_1:57789843-57789862 | Msa0031160:exon | 40.0% | |
| !! | ATAAGGAAAGTGTCAGCCAT+GGG | - | chr1_1:57789862-57789881 | None:intergenic | 40.0% |
| CTAGCAACTGCTACACAAAA+CGG | + | chr1_1:57789958-57789977 | Msa0031160:CDS | 40.0% | |
| ATGACGGTGAATGTTACTGA+GGG | - | chr1_1:57790066-57790085 | None:intergenic | 40.0% | |
| GTAGCTTCAAGAACACTCTA+CGG | + | chr1_1:57790297-57790316 | Msa0031160:CDS | 40.0% | |
| GTTGTTATGTTGCATGTACG+TGG | - | chr1_1:57790354-57790373 | None:intergenic | 40.0% | |
| ATCAGTCTCAAACCCTACTT+TGG | + | chr1_1:57790452-57790471 | Msa0031160:CDS | 40.0% | |
| CGAATATACCGGAGTTATGT+AGG | + | chr1_1:57790481-57790500 | Msa0031160:CDS | 40.0% | |
| !! | GGTAACACTTTAGCTCTGTT+TGG | + | chr1_1:57790886-57790905 | Msa0031160:intron | 40.0% |
| !! | GAAACATAAATGGTGATGGG+TGG | + | chr1_1:57791871-57791890 | Msa0031160:intron | 40.0% |
| GGGTGTAAGAATGATCTCTT+AGG | + | chr1_1:57792007-57792026 | Msa0031160:intron | 40.0% | |
| GCTTGTGTGTTTCAACCTTA+AGG | + | chr1_1:57792192-57792211 | Msa0031160:intron | 40.0% | |
| ! | AAGGTATTTGATTCCAGACC+TGG | + | chr1_1:57792211-57792230 | Msa0031160:intron | 40.0% |
| AGGTATTTGATTCCAGACCT+GGG | + | chr1_1:57792212-57792231 | Msa0031160:intron | 40.0% | |
| TGTCAAACAAATTAGGACGG+AGG | - | chr1_1:57792449-57792468 | None:intergenic | 40.0% | |
| AATTGGATTGAGATTGGACG+TGG | + | chr1_1:57792741-57792760 | Msa0031160:intron | 40.0% | |
| ATTCCCATTAGTTCACCACT+TGG | + | chr1_1:57792823-57792842 | Msa0031160:intron | 40.0% | |
| TTCCCATTAGTTCACCACTT+GGG | + | chr1_1:57792824-57792843 | Msa0031160:intron | 40.0% | |
| TGACCATTCCACCATATCAT+CGG | + | chr1_1:57792847-57792866 | Msa0031160:intron | 40.0% | |
| TTCAACTCACTCCGATGATA+TGG | - | chr1_1:57792861-57792880 | None:intergenic | 40.0% | |
| GGTTAGATGGGATAGTTGTT+TGG | - | chr1_1:57792887-57792906 | None:intergenic | 40.0% | |
| ! | TGGATGGATTCTGGTTAGAT+GGG | - | chr1_1:57792899-57792918 | None:intergenic | 40.0% |
| ! | GAATGAATGTGGATGGATTC+TGG | - | chr1_1:57792908-57792927 | None:intergenic | 40.0% |
| TCTCCCAAAAAAATTGTCCC+GGG | + | chr1_1:57794092-57794111 | Msa0031160:intron | 40.0% | |
| GGCTAAATTCCCATGTATTG+TGG | - | chr1_1:57794181-57794200 | None:intergenic | 40.0% | |
| ! | AAATGGGTTTCGCTGTTCAT+TGG | - | chr1_1:57794204-57794223 | None:intergenic | 40.0% |
| CATTTATTATCAGTGGGCCA+TGG | - | chr1_1:57794308-57794327 | None:intergenic | 40.0% | |
| CATGGCCCACTGATAATAAA+TGG | + | chr1_1:57794306-57794325 | Msa0031160:intron | 40.0% | |
| CAGGCTCCATTTATTATCAG+TGG | - | chr1_1:57794315-57794334 | None:intergenic | 40.0% | |
| CTATATCGAGCTTTCACGAT+GGG | - | chr1_1:57794369-57794388 | None:intergenic | 40.0% | |
| TGACGAATGGCTTCAAGTAT+GGG | - | chr1_1:57794018-57794037 | None:intergenic | 40.0% | |
| ATGACGAATGGCTTCAAGTA+TGG | - | chr1_1:57794019-57794038 | None:intergenic | 40.0% | |
| CGACACAGTTGTTAACCAAA+TGG | - | chr1_1:57794743-57794762 | None:intergenic | 40.0% | |
| ! | TAACAACTGTGTCGTTGATC+TGG | + | chr1_1:57794749-57794768 | Msa0031160:intron | 40.0% |
| !! | CTTAACCCGTTAGCTTGTTT+GGG | + | chr1_1:57794905-57794924 | Msa0031160:intron | 40.0% |
| TGATTCCCAAACAAGCTAAC+GGG | - | chr1_1:57794913-57794932 | None:intergenic | 40.0% | |
| GTGATTCCCAAACAAGCTAA+CGG | - | chr1_1:57794914-57794933 | None:intergenic | 40.0% | |
| TTGGGAATCACTTTGTATCG+AGG | + | chr1_1:57794923-57794942 | Msa0031160:intron | 40.0% | |
| ATAGAATTCACTAGGCTTGC+AGG | - | chr1_1:57795206-57795225 | None:intergenic | 40.0% | |
| !!! | GCTATTTTGGGGTTCATTGT+TGG | - | chr1_1:57795266-57795285 | None:intergenic | 40.0% |
| TCAGAAAGAATCCCTCACTT+AGG | + | chr1_1:57795296-57795315 | Msa0031160:CDS | 40.0% | |
| TTGTTGCAAACACTAACGCA+CGG | - | chr1_1:57795346-57795365 | None:intergenic | 40.0% | |
| ! | TGGACTTCTTTGCATTGACA+TGG | + | chr1_1:57795466-57795485 | Msa0031160:CDS | 40.0% |
| TGGTTTCATGGCTGTTAGTT+TGG | + | chr1_1:57795544-57795563 | Msa0031160:CDS | 40.0% | |
| ! | GGTTTCATGGCTGTTAGTTT+GGG | + | chr1_1:57795545-57795564 | Msa0031160:CDS | 40.0% |
| GTCTTGTGAGGATGTCAATA+GGG | + | chr1_1:57795657-57795676 | Msa0031160:CDS | 40.0% | |
| !! | CATAAGGAAAGTGTCAGCCA+TGG | - | chr1_1:57789863-57789882 | None:intergenic | 45.0% |
| ! | TTTGGGTTTCGTCCTCGATA+CGG | - | chr1_1:57789927-57789946 | None:intergenic | 45.0% |
| CATGACGGTGAATGTTACTG+AGG | - | chr1_1:57790067-57790086 | None:intergenic | 45.0% | |
| CTCAGTAACATTCACCGTCA+TGG | + | chr1_1:57790065-57790084 | Msa0031160:CDS | 45.0% | |
| !! | GAGAGTTTCTGGTTCCATGA+CGG | - | chr1_1:57790082-57790101 | None:intergenic | 45.0% |
| TAGACGAAGAAATCACGGTC+TGG | - | chr1_1:57790132-57790151 | None:intergenic | 45.0% | |
| GGCTGTAGACGAAGAAATCA+CGG | - | chr1_1:57790137-57790156 | None:intergenic | 45.0% | |
| ATCGGAAATCTCAACGAACG+TGG | - | chr1_1:57790376-57790395 | None:intergenic | 45.0% | |
| AGTCTCAAACCCTACTTTGG+CGG | + | chr1_1:57790455-57790474 | Msa0031160:CDS | 45.0% | |
| TATACCGGAGTTATGTAGGG+TGG | + | chr1_1:57790485-57790504 | Msa0031160:CDS | 45.0% | |
| AGTCTCTCGAAGTACATCAG+TGG | + | chr1_1:57790600-57790619 | Msa0031160:CDS | 45.0% | |
| TCTCGAAGTACATCAGTGGT+GGG | + | chr1_1:57790604-57790623 | Msa0031160:CDS | 45.0% | |
| !!! | TGGTGATGGGTGGTTTTTGT+TGG | + | chr1_1:57791881-57791900 | Msa0031160:intron | 45.0% |
| TTCTCTTCTCTTAGATGCCC+AGG | - | chr1_1:57792232-57792251 | None:intergenic | 45.0% | |
| ATGGATCAGTTATTCCGGGA+CGG | + | chr1_1:57792644-57792663 | Msa0031160:intron | 45.0% | |
| !! | TCGTCATCTCATCGGTTCAA+GGG | - | chr1_1:57792694-57792713 | None:intergenic | 45.0% |
| !! | TTCGTCATCTCATCGGTTCA+AGG | - | chr1_1:57792695-57792714 | None:intergenic | 45.0% |
| GAGGAAGTTCGTCATCTCAT+CGG | - | chr1_1:57792702-57792721 | None:intergenic | 45.0% | |
| CACCCAAGTGGTGAACTAAT+GGG | - | chr1_1:57792829-57792848 | None:intergenic | 45.0% | |
| TCACCCAAGTGGTGAACTAA+TGG | - | chr1_1:57792830-57792849 | None:intergenic | 45.0% | |
| ! | ACTCCGATGATATGGTGGAA+TGG | - | chr1_1:57792853-57792872 | None:intergenic | 45.0% |
| AACTCACTCCGATGATATGG+TGG | - | chr1_1:57792858-57792877 | None:intergenic | 45.0% | |
| ! | GTGGATGGATTCTGGTTAGA+TGG | - | chr1_1:57792900-57792919 | None:intergenic | 45.0% |
| GTCGAATCTAGACCCATACT+TGG | - | chr1_1:57792981-57793000 | None:intergenic | 45.0% | |
| GAACAGCGAAACCCATTTAG+TGG | - | chr1_1:57794261-57794280 | None:intergenic | 45.0% | |
| GTTTCGCTGTTCATTCGTGA+GGG | + | chr1_1:57794210-57794229 | Msa0031160:intron | 45.0% | |
| TTTCGCTGTTCATTGGTGAG+GGG | - | chr1_1:57794252-57794271 | None:intergenic | 45.0% | |
| GTTTCGCTGTTCATTGGTGA+GGG | - | chr1_1:57794253-57794272 | None:intergenic | 45.0% | |
| GAACAGCGAAACCCATTTAG+TGG | + | chr1_1:57794261-57794280 | Msa0031160:intron | 45.0% | |
| GCTATATCGAGCTTTCACGA+TGG | - | chr1_1:57794370-57794389 | None:intergenic | 45.0% | |
| GACGAATGGCTTCAAGTATG+GGG | - | chr1_1:57794396-57794415 | None:intergenic | 45.0% | |
| !!! | GCGCTACTTTTCAACCCATT+TGG | + | chr1_1:57794725-57794744 | Msa0031160:intron | 45.0% |
| !! | GCTTAACCCGTTAGCTTGTT+TGG | + | chr1_1:57794904-57794923 | Msa0031160:intron | 45.0% |
| !! | TCTATGATGGATCTCCACCA+AGG | + | chr1_1:57795221-57795240 | Msa0031160:CDS | 45.0% |
| !! | CTATGATGGATCTCCACCAA+GGG | + | chr1_1:57795222-57795241 | Msa0031160:CDS | 45.0% |
| !! | TATGATGGATCTCCACCAAG+GGG | + | chr1_1:57795223-57795242 | Msa0031160:CDS | 45.0% |
| CTAATAGCATTATGGCCCCT+TGG | - | chr1_1:57795241-57795260 | None:intergenic | 45.0% | |
| CAAGGGGCCATAATGCTATT+AGG | + | chr1_1:57795239-57795258 | Msa0031160:CDS | 45.0% | |
| TCATCCTTAGGCCTAAGTGA+GGG | - | chr1_1:57795310-57795329 | None:intergenic | 45.0% | |
| TTCATCCTTAGGCCTAAGTG+AGG | - | chr1_1:57795311-57795330 | None:intergenic | 45.0% | |
| GGATTCAAGGTAATCTACCC+TGG | + | chr1_1:57795380-57795399 | Msa0031160:CDS | 45.0% | |
| CATGATGTGGATGGTCTTCT+AGG | - | chr1_1:57795406-57795425 | None:intergenic | 45.0% | |
| TCTGAGGAAAAGGTTCTTGC+TGG | + | chr1_1:57795623-57795642 | Msa0031160:CDS | 45.0% | |
| GTTCTTGCTGGAATTTCACC+AGG | + | chr1_1:57795635-57795654 | Msa0031160:CDS | 45.0% | |
| ! | GAATTTCACCAGGTCTTGTG+AGG | + | chr1_1:57795645-57795664 | Msa0031160:CDS | 45.0% |
| ATTGACATCCTCACAAGACC+TGG | - | chr1_1:57795656-57795675 | None:intergenic | 45.0% | |
| ! | GGTCTTGTGAGGATGTCAAT+AGG | + | chr1_1:57795656-57795675 | Msa0031160:CDS | 45.0% |
| !! | TTGGGACTTTGGAGCAGAAA+TGG | + | chr1_1:57795684-57795703 | Msa0031160:CDS | 45.0% |
| !!! | TAAAAAAAATAGTTTTTTTT+TGG | - | chr1_1:57791294-57791313 | None:intergenic | 5.0% |
| !! | ATGATAATTTAATAATATTT+AGG | - | chr1_1:57792801-57792820 | None:intergenic | 5.0% |
| !!! | ATTTATTATTATACATTTTA+AGG | - | chr1_1:57793177-57793196 | None:intergenic | 5.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | + | chr1_1:57793453-57793472 | Msa0031160:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+AGG | + | chr1_1:57793507-57793526 | Msa0031160:intron | 5.0% |
| GTCAGCCATGGGTTTAGTGT+AGG | - | chr1_1:57789851-57789870 | None:intergenic | 50.0% | |
| AACATGCGTCGGAGAGTTTC+TGG | - | chr1_1:57790093-57790112 | None:intergenic | 50.0% | |
| TAGACGGCTGAGGTTAAGGA+CGG | - | chr1_1:57790175-57790194 | None:intergenic | 50.0% | |
| CCATTAGACGGCTGAGGTTA+AGG | - | chr1_1:57790179-57790198 | None:intergenic | 50.0% | |
| CCTTAACCTCAGCCGTCTAA+TGG | + | chr1_1:57790176-57790195 | Msa0031160:CDS | 50.0% | |
| TGAAGCTACCACGTGTTCTC+CGG | - | chr1_1:57790286-57790305 | None:intergenic | 50.0% | |
| GCTTCAAGAACACTCTACGG+TGG | + | chr1_1:57790300-57790319 | Msa0031160:CDS | 50.0% | |
| TATTCGCCACCGCCAAAGTA+GGG | - | chr1_1:57790467-57790486 | None:intergenic | 50.0% | |
| ATATTCGCCACCGCCAAAGT+AGG | - | chr1_1:57790468-57790487 | None:intergenic | 50.0% | |
| TTTGGCGGTGGCGAATATAC+CGG | + | chr1_1:57790470-57790489 | Msa0031160:CDS | 50.0% | |
| AGTTATGTAGGGTGGCGCAT+CGG | + | chr1_1:57790493-57790512 | Msa0031160:CDS | 50.0% | |
| TACTCCGATGGTGATTTCGC+CGG | + | chr1_1:57790548-57790567 | Msa0031160:CDS | 50.0% | |
| TTCACCGGCGAAATCACCAT+CGG | - | chr1_1:57790555-57790574 | None:intergenic | 50.0% | |
| ACATCAGCACCAAGCTTCAC+CGG | - | chr1_1:57790570-57790589 | None:intergenic | 50.0% | |
| CTCTCGAAGTACATCAGTGG+TGG | + | chr1_1:57790603-57790622 | Msa0031160:CDS | 50.0% | |
| CTCGAAGTACATCAGTGGTG+GGG | + | chr1_1:57790605-57790624 | Msa0031160:CDS | 50.0% | |
| TTCTCTTAGATGCCCAGGTC+TGG | - | chr1_1:57792227-57792246 | None:intergenic | 50.0% | |
| ATCAGTTATTCCGGGACGGA+GGG | + | chr1_1:57792648-57792667 | Msa0031160:intron | 50.0% | |
| !! | GTCATCTCATCGGTTCAAGG+GGG | - | chr1_1:57792692-57792711 | None:intergenic | 50.0% |
| !! | CGTCATCTCATCGGTTCAAG+GGG | - | chr1_1:57792693-57792712 | None:intergenic | 50.0% |
| CTAAGGTGGGGGAATGAATG+TGG | - | chr1_1:57792919-57792938 | None:intergenic | 50.0% | |
| AACGATCGTTCACGAGAGTC+TGG | - | chr1_1:57793784-57793803 | None:intergenic | 50.0% | |
| !! | GGGAAGTGCTTGATGACGAA+TGG | - | chr1_1:57794031-57794050 | None:intergenic | 50.0% |
| GGTTTCGCTGTTCATTCGTG+AGG | + | chr1_1:57794209-57794228 | Msa0031160:intron | 50.0% | |
| GGTTTCGCTGTTCATTGGTG+AGG | - | chr1_1:57794254-57794273 | None:intergenic | 50.0% | |
| !! | CGGAAGTGCTTGATGACGAA+TGG | - | chr1_1:57794410-57794429 | None:intergenic | 50.0% |
| ATAGCATTATGGCCCCTTGG+TGG | - | chr1_1:57795238-57795257 | None:intergenic | 50.0% | |
| GAATCCCTCACTTAGGCCTA+AGG | + | chr1_1:57795303-57795322 | Msa0031160:CDS | 50.0% | |
| CTCGATACGGTTTCGCTTGG+CGG | - | chr1_1:57789914-57789933 | None:intergenic | 55.0% | |
| GTCCTCGATACGGTTTCGCT+TGG | - | chr1_1:57789917-57789936 | None:intergenic | 55.0% | |
| CGACACGAATTCGGCGAACA+CGG | + | chr1_1:57790018-57790037 | Msa0031160:CDS | 55.0% | |
| ACGGTCTGGACCTAACTCTC+CGG | - | chr1_1:57790118-57790137 | None:intergenic | 55.0% | |
| GGACGGTAGGGTTGAAGTGA+CGG | - | chr1_1:57790158-57790177 | None:intergenic | 55.0% | |
| GGCTGAGGTTAAGGACGGTA+GGG | - | chr1_1:57790170-57790189 | None:intergenic | 55.0% | |
| CTTCGAGAGCGGCCATTAGA+CGG | - | chr1_1:57790191-57790210 | None:intergenic | 55.0% | |
| GGCTTCTGTACCTTCGAGAG+CGG | - | chr1_1:57790202-57790221 | None:intergenic | 55.0% | |
| TTGGAGGATTGCGGCGGAAA+TGG | - | chr1_1:57790253-57790272 | None:intergenic | 55.0% | |
| ! | GGAGGTGAGTTGGAGGATTG+CGG | - | chr1_1:57790262-57790281 | None:intergenic | 55.0% |
| ATCCTCCAACTCACCTCCAC+CGG | + | chr1_1:57790264-57790283 | Msa0031160:CDS | 55.0% | |
| CTCAAACCCTACTTTGGCGG+TGG | + | chr1_1:57790458-57790477 | Msa0031160:CDS | 55.0% | |
| TGCGCCACCCTACATAACTC+CGG | - | chr1_1:57790492-57790511 | None:intergenic | 55.0% | |
| GTGATTTCGCCGGTGAAGCT+TGG | + | chr1_1:57790558-57790577 | Msa0031160:CDS | 55.0% | |
| GGTGGGGCAGATATCATTGC+AGG | + | chr1_1:57790621-57790640 | Msa0031160:CDS | 55.0% | |
| GATCAGTTATTCCGGGACGG+AGG | + | chr1_1:57792647-57792666 | Msa0031160:intron | 55.0% | |
| ATCTACTACTCCCTCCGTCC+CGG | - | chr1_1:57792661-57792680 | None:intergenic | 55.0% | |
| TGGTGGAATGGTCACCCAAG+TGG | - | chr1_1:57792841-57792860 | None:intergenic | 55.0% | |
| GGTGGGGGAATGAATGTGGA+TGG | - | chr1_1:57792915-57792934 | None:intergenic | 55.0% | |
| TGGGCTACGGCCACAATACA+TGG | + | chr1_1:57794168-57794187 | Msa0031160:intron | 55.0% | |
| GGGCTACGGCCACAATACAT+GGG | + | chr1_1:57794169-57794188 | Msa0031160:intron | 55.0% | |
| GTGGATGGTCTTCTAGGCCA+GGG | - | chr1_1:57795400-57795419 | None:intergenic | 55.0% | |
| TGTGGATGGTCTTCTAGGCC+AGG | - | chr1_1:57795401-57795420 | None:intergenic | 55.0% | |
| !! | GGGTGGTGGTGGTGGTCATA+AGG | - | chr1_1:57789879-57789898 | None:intergenic | 60.0% |
| ACGGTTTCGCTTGGCGGTTG+CGG | - | chr1_1:57789908-57789927 | None:intergenic | 60.0% | |
| CGCCAAGCGAAACCGTATCG+AGG | + | chr1_1:57789912-57789931 | Msa0031160:CDS | 60.0% | |
| TGAGGTGGCTGGGTCGAAGA+CGG | - | chr1_1:57789986-57790005 | None:intergenic | 60.0% | |
| GCCAGCGCACGACACGAATT+CGG | + | chr1_1:57790009-57790028 | Msa0031160:CDS | 60.0% | |
| CACGAATTCGGCGAACACGG+CGG | + | chr1_1:57790021-57790040 | Msa0031160:CDS | 60.0% | |
| ACTCTCCGACGCATGTTCGC+CGG | + | chr1_1:57790096-57790115 | Msa0031160:CDS | 60.0% | |
| ACTCTCCGGCGAACATGCGT+CGG | - | chr1_1:57790104-57790123 | None:intergenic | 60.0% | |
| CGCATGTTCGCCGGAGAGTT+AGG | + | chr1_1:57790105-57790124 | Msa0031160:CDS | 60.0% | |
| CGGCTGAGGTTAAGGACGGT+AGG | - | chr1_1:57790171-57790190 | None:intergenic | 60.0% | |
| CGTCTAATGGCCGCTCTCGA+AGG | + | chr1_1:57790189-57790208 | Msa0031160:CDS | 60.0% | |
| GCCGCTTACTGCACATCCAG+CGG | + | chr1_1:57790219-57790238 | Msa0031160:CDS | 60.0% | |
| GCCGCTGGATGTGCAGTAAG+CGG | - | chr1_1:57790223-57790242 | None:intergenic | 60.0% | |
| GAGGATTGCGGCGGAAATGG+CGG | - | chr1_1:57790250-57790269 | None:intergenic | 60.0% | |
| ! | GGTGAGTTGGAGGATTGCGG+CGG | - | chr1_1:57790259-57790278 | None:intergenic | 60.0% |
| GTTCTCCGGTGGAGGTGAGT+TGG | - | chr1_1:57790272-57790291 | None:intergenic | 60.0% | |
| TACCACGTGTTCTCCGGTGG+AGG | - | chr1_1:57790280-57790299 | None:intergenic | 60.0% | |
| AGCTACCACGTGTTCTCCGG+TGG | - | chr1_1:57790283-57790302 | None:intergenic | 60.0% | |
| TGTAGGGTGGCGCATCGGAA+AGG | + | chr1_1:57790498-57790517 | Msa0031160:CDS | 60.0% | |
| ! | GGCGCATCGGAAAGGTGTGA+CGG | + | chr1_1:57790506-57790525 | Msa0031160:CDS | 60.0% |
| ! | GCATCGGAAAGGTGTGACGG+TGG | + | chr1_1:57790509-57790528 | Msa0031160:CDS | 60.0% |
| ! | TCGGAAAGGTGTGACGGTGG+TGG | + | chr1_1:57790512-57790531 | Msa0031160:CDS | 60.0% |
| ! | GAAAGGTGTGACGGTGGTGG+TGG | + | chr1_1:57790515-57790534 | Msa0031160:CDS | 60.0% |
| GTTTCGCTTGGCGGTTGCGG+TGG | - | chr1_1:57789905-57789924 | None:intergenic | 65.0% | |
| ! | CGCTGGCTAGTGAGGTGGCT+GGG | - | chr1_1:57789996-57790015 | None:intergenic | 65.0% |
| !! | TCGTGCGCTGGCTAGTGAGG+TGG | - | chr1_1:57790001-57790020 | None:intergenic | 65.0% |
| !! | GTGTCGTGCGCTGGCTAGTG+AGG | - | chr1_1:57790004-57790023 | None:intergenic | 65.0% |
| GCCGAATTCGTGTCGTGCGC+TGG | - | chr1_1:57790013-57790032 | None:intergenic | 65.0% | |
| GAGCGGCCATTAGACGGCTG+AGG | - | chr1_1:57790185-57790204 | None:intergenic | 65.0% | |
| !! | GGAAATGGCGGACATGCCGC+TGG | - | chr1_1:57790238-57790257 | None:intergenic | 65.0% |
| ! | CTCCGGTGGAGGTGAGTTGG+AGG | - | chr1_1:57790269-57790288 | None:intergenic | 65.0% |
| CACCTCCACCGGAGAACACG+TGG | + | chr1_1:57790275-57790294 | Msa0031160:CDS | 65.0% | |
| TCGCTTGGCGGTTGCGGTGG+CGG | - | chr1_1:57789902-57789921 | None:intergenic | 70.0% | |
| !! | GCGCTGGCTAGTGAGGTGGC+TGG | - | chr1_1:57789997-57790016 | None:intergenic | 70.0% |
| ! | CTTGGCGGTTGCGGTGGCGG+GGG | - | chr1_1:57789899-57789918 | None:intergenic | 75.0% |
| GCTTGGCGGTTGCGGTGGCG+GGG | - | chr1_1:57789900-57789919 | None:intergenic | 75.0% | |
| CGCTTGGCGGTTGCGGTGGC+GGG | - | chr1_1:57789901-57789920 | None:intergenic | 75.0% | |
| !!! | GGTGGCGGGGGTGGTGGTGG+TGG | - | chr1_1:57789887-57789906 | None:intergenic | 80.0% |
| !!! | TGCGGTGGCGGGGGTGGTGG+TGG | - | chr1_1:57789890-57789909 | None:intergenic | 80.0% |
| !!! | GGTTGCGGTGGCGGGGGTGG+TGG | - | chr1_1:57789893-57789912 | None:intergenic | 80.0% |
| !!! | GGCGGTTGCGGTGGCGGGGG+TGG | - | chr1_1:57789896-57789915 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 57789747 | 57795965 | 57789747 | ID=Msa0031160;Name=Msa0031160 |
| chr1_1 | mRNA | 57789747 | 57795965 | 57789747 | ID=Msa0031160-mRNA-1;Parent=Msa0031160;Name=Msa0031160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=115|1|1|1|1|1|2|199|452 |
| chr1_1 | exon | 57789747 | 57790642 | 57789747 | ID=Msa0031160-mRNA-1:exon:17499;Parent=Msa0031160-mRNA-1 |
| chr1_1 | exon | 57795189 | 57795965 | 57795189 | ID=Msa0031160-mRNA-1:exon:17500;Parent=Msa0031160-mRNA-1 |
| chr1_1 | five_prime_UTR | 57789747 | 57789861 | 57789747 | ID=Msa0031160-mRNA-1:five_prime_utr;Parent=Msa0031160-mRNA-1 |
| chr1_1 | CDS | 57789862 | 57790642 | 57789862 | ID=Msa0031160-mRNA-1:cds;Parent=Msa0031160-mRNA-1 |
| chr1_1 | CDS | 57795189 | 57795766 | 57795189 | ID=Msa0031160-mRNA-1:cds;Parent=Msa0031160-mRNA-1 |
| chr1_1 | three_prime_UTR | 57795767 | 57795965 | 57795767 | ID=Msa0031160-mRNA-1:three_prime_utr;Parent=Msa0031160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
