Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038270 | sp|Q9XIG1|U80B1_ARATH | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0038270 | 0.802972 | 4.353704e-49 | -8.615850e-47 |
| Msa0038270 | Msa0055590 | 0.808698 | 2.724992e-50 | -8.615850e-47 |
| Msa0038270 | Msa0086120 | 0.824274 | 8.820818e-54 | -8.615850e-47 |
| Msa0038270 | Msa0132500 | 0.875045 | 4.199240e-68 | -8.615850e-47 |
| Msa0038270 | Msa0440110 | 0.807020 | 6.197499e-50 | -8.615850e-47 |
| Msa0038270 | Msa0832370 | 0.810431 | 1.156612e-50 | -8.615850e-47 |
| Msa0038270 | Msa0847390 | 0.805178 | 1.513124e-49 | -8.615850e-47 |
| Msa0038270 | Msa1008490 | 0.815677 | 8.178565e-52 | -8.615850e-47 |
| Msa0038270 | Msa1033440 | -0.812671 | 3.770916e-51 | -8.615850e-47 |
| Msa0038270 | Msa1073110 | -0.807628 | 4.606902e-50 | -8.615850e-47 |
| Msa0038270 | Msa1083410 | 0.817763 | 2.786168e-52 | -8.615850e-47 |
| Msa0038270 | Msa1201990 | 0.800785 | 1.224344e-48 | -8.615850e-47 |
| Msa0038270 | Msa1329990 | 0.803369 | 3.603212e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038270 | MtrunA17_Chr1g0201761 | 97.767 | 627 | 12 | 1 | 1 | 627 | 1 | 625 | 0.0 | 1265 |
| Msa0038270 | MtrunA17_Chr4g0010281 | 54.352 | 563 | 235 | 6 | 51 | 598 | 55 | 610 | 0.0 | 626 |
| Msa0038270 | MtrunA17_Chr4g0010291 | 53.748 | 547 | 235 | 5 | 61 | 596 | 63 | 602 | 0.0 | 611 |
| Msa0038270 | MtrunA17_Chr7g0248971 | 56.173 | 486 | 205 | 3 | 113 | 593 | 92 | 574 | 0.0 | 577 |
| Msa0038270 | MtrunA17_Chr0c19g0493781 | 55.102 | 294 | 117 | 3 | 312 | 593 | 3 | 293 | 6.09e-117 | 351 |
| Msa0038270 | MtrunA17_Chr0c19g0493791 | 55.224 | 201 | 86 | 2 | 113 | 311 | 92 | 290 | 6.58e-67 | 220 |
| Msa0038270 | MtrunA17_Chr7g0224211 | 57.616 | 151 | 64 | 0 | 446 | 596 | 56 | 206 | 2.68e-55 | 187 |
| Msa0038270 | MtrunA17_Chr2g0301441 | 31.111 | 270 | 129 | 10 | 378 | 594 | 231 | 496 | 1.55e-21 | 98.6 |
| Msa0038270 | MtrunA17_Chr7g0224201 | 51.111 | 45 | 22 | 0 | 389 | 433 | 27 | 71 | 3.01e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038270 | AT1G43620.7 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.1 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.3 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.5 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.2 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.6 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.4 | 67.987 | 631 | 182 | 9 | 1 | 627 | 1 | 615 | 0.0 | 866 |
| Msa0038270 | AT1G43620.8 | 78.490 | 437 | 91 | 2 | 194 | 627 | 7 | 443 | 0.0 | 732 |
| Msa0038270 | AT3G07020.1 | 52.993 | 568 | 261 | 2 | 37 | 598 | 58 | 625 | 0.0 | 624 |
| Msa0038270 | AT3G07020.2 | 52.993 | 568 | 261 | 2 | 37 | 598 | 58 | 625 | 0.0 | 624 |
| Msa0038270 | AT3G07020.3 | 56.130 | 522 | 217 | 2 | 89 | 598 | 22 | 543 | 0.0 | 620 |
| Msa0038270 | AT5G24750.1 | 21.357 | 501 | 291 | 16 | 174 | 581 | 13 | 503 | 5.60e-18 | 87.8 |
Find 189 sgRNAs with CRISPR-Local
Find 525 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCGCCTCCTTTATATTT+TGG | 0.131145 | 1_1:+67674840 | Msa0038270:CDS |
| ACCACTCCAGTCCTCTTAAT+TGG | 0.238648 | 1_1:+67677131 | Msa0038270:CDS |
| CTTGACCTTGATACTTGAAT+TGG | 0.245771 | 1_1:+67669249 | Msa0038270:five_prime_UTR |
| TCTTTGGAGATCAATTCTTT+TGG | 0.269484 | 1_1:+67676786 | Msa0038270:CDS |
| TTTCTCAAAGTGCTGGTTAT+TGG | 0.284056 | 1_1:+67674017 | Msa0038270:CDS |
| TGACCTTCAGCTGCTTTCTT+TGG | 0.293929 | 1_1:-67673167 | None:intergenic |
| TCAACATTGAGCTCGGATAT+TGG | 0.298508 | 1_1:-67676851 | None:intergenic |
| TTCTCAAAGTGCTGGTTATT+GGG | 0.310436 | 1_1:+67674018 | Msa0038270:CDS |
| ACAACAATAGTCCCATTCTT+TGG | 0.313820 | 1_1:+67676770 | Msa0038270:CDS |
| AGCCTGCACAGCACCTGATT+TGG | 0.315404 | 1_1:+67673209 | Msa0038270:CDS |
| GACCGAGGTTGGGGCAATCT+AGG | 0.322300 | 1_1:+67675812 | Msa0038270:CDS |
| GGGAATTATCGACCGAGGTT+GGG | 0.323617 | 1_1:+67675802 | Msa0038270:CDS |
| TGGTGTAAATTTCTATCCTC+TGG | 0.330664 | 1_1:+67672191 | Msa0038270:CDS |
| GTAGTAGTAGTTCAAATTAA+TGG | 0.345053 | 1_1:-67669212 | None:intergenic |
| CTGACAGTCTGTCCAATATT+AGG | 0.347761 | 1_1:-67670968 | None:intergenic |
| GGCTCTTTAGTTGATGTTGT+TGG | 0.348548 | 1_1:+67674750 | Msa0038270:CDS |
| AGAATGGTAGCATAATGTTT+TGG | 0.360248 | 1_1:+67677296 | Msa0038270:three_prime_UTR |
| AATAACAACAGATGTTATAT+TGG | 0.364034 | 1_1:+67675754 | Msa0038270:CDS |
| TACATCTTGCTGAAGCCCTT+GGG | 0.364963 | 1_1:+67673677 | Msa0038270:CDS |
| CTCCCAAATCCAAAATATAA+AGG | 0.373017 | 1_1:-67674849 | None:intergenic |
| TCGAAGGCATGACCTAATAT+TGG | 0.373430 | 1_1:+67670956 | Msa0038270:CDS |
| TTGAGCTCGGATATTGGAAT+TGG | 0.375164 | 1_1:-67676845 | None:intergenic |
| TTGAGGAATGCCCTCATGAT+TGG | 0.378291 | 1_1:+67676366 | Msa0038270:CDS |
| CATTGCATCACAGCTCCTAT+TGG | 0.379859 | 1_1:+67670861 | Msa0038270:CDS |
| TTATAGTTGGAAATTCAAAA+AGG | 0.383463 | 1_1:+67669281 | Msa0038270:five_prime_UTR |
| GGAATGCCGGTTTCCAAATC+AGG | 0.384516 | 1_1:-67673222 | None:intergenic |
| GATACTTGAATTGGGTTATG+AGG | 0.386739 | 1_1:+67669258 | Msa0038270:five_prime_UTR |
| TTGGGTTATGAGGTTATAGT+TGG | 0.390425 | 1_1:+67669268 | Msa0038270:five_prime_UTR |
| GTTGGCAGAGGTAGCTCATC+AGG | 0.392573 | 1_1:-67677085 | None:intergenic |
| TGACGATTCACCTTCATCTA+AGG | 0.393461 | 1_1:+67669703 | Msa0038270:CDS |
| TTGTCCATACCACTTGGTTT+CGG | 0.398350 | 1_1:-67674317 | None:intergenic |
| AGAAGTAGTTGAAGATGAAA+AGG | 0.401885 | 1_1:+67669610 | Msa0038270:CDS |
| AAGAAGTAACTTCCGATGAT+TGG | 0.403909 | 1_1:-67669736 | None:intergenic |
| ATAGATATGGCAAGGAATAA+AGG | 0.406136 | 1_1:+67673111 | Msa0038270:intron |
| TTTGTTCTTTCTGAGGTTGT+TGG | 0.414603 | 1_1:+67669422 | Msa0038270:five_prime_UTR |
| AAGAATTGATCTCCAAAGAA+TGG | 0.420179 | 1_1:-67676782 | None:intergenic |
| ACGGCTACAGGATTAAAATC+TGG | 0.420333 | 1_1:+67676561 | Msa0038270:CDS |
| GGCCATTGCGAAGAGACTTC+AGG | 0.423276 | 1_1:+67671412 | Msa0038270:CDS |
| AATGTTTACTTGCAGGAGTA+TGG | 0.427510 | 1_1:+67672114 | Msa0038270:intron |
| TTTAAAAGAGACAGAACAAC+GGG | 0.432711 | 1_1:+67675781 | Msa0038270:CDS |
| CTACCGACTCTTCAAAAGAT+TGG | 0.435951 | 1_1:-67671289 | None:intergenic |
| CGGCTACAGGATTAAAATCT+GGG | 0.439445 | 1_1:+67676562 | Msa0038270:CDS |
| ATTGCAAACCCTCCCGCATA+TGG | 0.441124 | 1_1:+67673264 | Msa0038270:CDS |
| GTACATCTTGCTGAAGCCCT+TGG | 0.442502 | 1_1:+67673676 | Msa0038270:CDS |
| GGAATTATCGACCGAGGTTG+GGG | 0.443195 | 1_1:+67675803 | Msa0038270:CDS |
| TTGACCTTGATACTTGAATT+GGG | 0.443305 | 1_1:+67669250 | Msa0038270:five_prime_UTR |
| ATCTCATCTTCAGCTATTAG+TGG | 0.443955 | 1_1:-67670897 | None:intergenic |
| ATATGCATTTCCCCACCCTT+TGG | 0.444072 | 1_1:+67673988 | Msa0038270:CDS |
| GGGTTTCTCTCAGTTCCAAT+AGG | 0.445007 | 1_1:-67670876 | None:intergenic |
| CCTCCTATACAAAATGTTTG+AGG | 0.445037 | 1_1:-67677421 | None:intergenic |
| AAGACATTTGTAAGGTCAGC+TGG | 0.446615 | 1_1:+67672171 | Msa0038270:CDS |
| TGATTGTGATGGGTTGTAAT+GGG | 0.449292 | 1_1:+67669570 | Msa0038270:exon |
| CTTTGTGTTTCAATGACTGT+TGG | 0.451980 | 1_1:+67669330 | Msa0038270:five_prime_UTR |
| GAACAAAACACAAAGTTCCT+TGG | 0.452755 | 1_1:-67669406 | None:intergenic |
| GGAGCGGGAACCACGGCTAC+AGG | 0.453883 | 1_1:+67676549 | Msa0038270:CDS |
| TAATTGTGGATCTACTGATA+TGG | 0.454178 | 1_1:+67674162 | Msa0038270:CDS |
| GGGGAATTATCGACCGAGGT+TGG | 0.456470 | 1_1:+67675801 | Msa0038270:CDS |
| CTCCTATACAAAATGTTTGA+GGG | 0.463892 | 1_1:-67677420 | None:intergenic |
| GCGCGTGTTTCTCAAAGTGC+TGG | 0.467890 | 1_1:+67674010 | Msa0038270:CDS |
| TTCCAAATCAGGTGCTGTGC+AGG | 0.469128 | 1_1:-67673211 | None:intergenic |
| ACAGCACCTGATTTGGAAAC+CGG | 0.472297 | 1_1:+67673216 | Msa0038270:CDS |
| CTTCCCCTCTCCTTAGATGA+AGG | 0.474030 | 1_1:-67669713 | None:intergenic |
| CTAATTTCAAGACATTTGTA+AGG | 0.475925 | 1_1:+67672163 | Msa0038270:CDS |
| GTGATTGTGATGGGTTGTAA+TGG | 0.478088 | 1_1:+67669569 | Msa0038270:exon |
| CAAATTGTCATACTTGTGGT+TGG | 0.479952 | 1_1:+67671362 | Msa0038270:CDS |
| AAGAATGGGACTATTGTTGT+TGG | 0.485641 | 1_1:-67676767 | None:intergenic |
| AGAATTGATCTCCAAAGAAT+GGG | 0.487173 | 1_1:-67676781 | None:intergenic |
| TTTGTGTTTCAATGACTGTT+GGG | 0.487621 | 1_1:+67669331 | Msa0038270:five_prime_UTR |
| CGGCATTCCCTTCACAGCTC+AGG | 0.488148 | 1_1:+67673236 | Msa0038270:CDS |
| AAATCAGGTGCTGTGCAGGC+TGG | 0.495055 | 1_1:-67673207 | None:intergenic |
| TCAGGTGAAATCTCGGACAA+TGG | 0.496008 | 1_1:+67676994 | Msa0038270:intron |
| AGGAGTATGGTCATCGCGTT+AGG | 0.502334 | 1_1:+67672127 | Msa0038270:intron |
| AACTTTCTGTTATTTCAGAA+TGG | 0.504428 | 1_1:+67677280 | Msa0038270:three_prime_UTR |
| CAATGACTGTTGGGTAGTAG+TGG | 0.507124 | 1_1:+67669340 | Msa0038270:five_prime_UTR |
| CTCTTCGCAATGGCCACAAA+AGG | 0.507208 | 1_1:-67671404 | None:intergenic |
| AATAAAGGTCTGATTCCGTC+TGG | 0.507240 | 1_1:+67673126 | Msa0038270:CDS |
| ACCGAGGTTGGGGCAATCTA+GGG | 0.507600 | 1_1:+67675813 | Msa0038270:CDS |
| GCAGCTGTCTTATATAATTG+TGG | 0.509774 | 1_1:+67674148 | Msa0038270:intron |
| GGGTGGTGATCCTCGAGTAT+TGG | 0.511057 | 1_1:+67672212 | Msa0038270:CDS |
| CAGGTGCATCATGGTGGAGC+GGG | 0.512653 | 1_1:+67676534 | Msa0038270:intron |
| ATAACCCAATTCAAGTATCA+AGG | 0.515858 | 1_1:-67669254 | None:intergenic |
| ATGTATTTCAGGTGAAATCT+CGG | 0.519127 | 1_1:+67676987 | Msa0038270:intron |
| CTGATTATTGTGATTGTGAT+GGG | 0.520454 | 1_1:+67669560 | Msa0038270:exon |
| AAGATGAGGACTCCACATAT+AGG | 0.521439 | 1_1:-67674291 | None:intergenic |
| GAAGTAGTTGAAGATGAAAA+GGG | 0.523347 | 1_1:+67669611 | Msa0038270:CDS |
| GAAACACGCGCCAAAGGGTG+GGG | 0.525242 | 1_1:-67673998 | None:intergenic |
| TTTAAATAATAGATATGGCA+AGG | 0.525373 | 1_1:+67673103 | Msa0038270:intron |
| TTTGAGAAACACGCGCCAAA+GGG | 0.526660 | 1_1:-67674003 | None:intergenic |
| GGTGTAAATTTCTATCCTCT+GGG | 0.527341 | 1_1:+67672192 | Msa0038270:CDS |
| TCTCATCTTCAGCTATTAGT+GGG | 0.530855 | 1_1:-67670896 | None:intergenic |
| TCCTCGTCTTCCACATGAGA+TGG | 0.530855 | 1_1:-67677109 | None:intergenic |
| ATTGAAACACAAAGAACGTT+CGG | 0.531146 | 1_1:-67669321 | None:intergenic |
| AATAATAGCCTGAGCTGTGA+AGG | 0.532487 | 1_1:-67673244 | None:intergenic |
| ATTTACCAACTGCCTATATG+TGG | 0.534491 | 1_1:+67674279 | Msa0038270:CDS |
| TTCTAATCACTCACCATATG+CGG | 0.534904 | 1_1:-67673277 | None:intergenic |
| AACAACACCACTTTGCAAGT+TGG | 0.537111 | 1_1:-67677162 | None:intergenic |
| TACATGCTGAAGTATGCAAT+AGG | 0.541098 | 1_1:-67674239 | None:intergenic |
| ACTACACATTTACCTCTGGC+TGG | 0.542391 | 1_1:-67676904 | None:intergenic |
| GTTACAAATTGTCATACTTG+TGG | 0.543374 | 1_1:+67671358 | Msa0038270:CDS |
| CAGAAAAGAGAGGGCTTCGA+AGG | 0.543506 | 1_1:+67670940 | Msa0038270:CDS |
| CACGGGAGGAATTTCTCCAA+TGG | 0.544705 | 1_1:+67674808 | Msa0038270:CDS |
| ACAAATTAAACTCACGTCCA+TGG | 0.545172 | 1_1:-67673727 | None:intergenic |
| ATTGTGAAGAAGATGTGAAT+AGG | 0.545573 | 1_1:-67673703 | None:intergenic |
| TGAACATTTATTGTTAGTCA+AGG | 0.546877 | 1_1:-67677367 | None:intergenic |
| TTCACCTTCATCTAAGGAGA+GGG | 0.547895 | 1_1:+67669709 | Msa0038270:CDS |
| AGAAACACGCGCCAAAGGGT+GGG | 0.550349 | 1_1:-67673999 | None:intergenic |
| TCGGATATTGGAATTGGAGC+AGG | 0.550790 | 1_1:-67676839 | None:intergenic |
| CTTTGAGAAACACGCGCCAA+AGG | 0.550897 | 1_1:-67674004 | None:intergenic |
| GTTTCCTCAATGTTCTGCTG+TGG | 0.552665 | 1_1:+67676391 | Msa0038270:CDS |
| ACTGATTATTGTGATTGTGA+TGG | 0.554723 | 1_1:+67669559 | Msa0038270:exon |
| GAGAAACACGCGCCAAAGGG+TGG | 0.555092 | 1_1:-67674000 | None:intergenic |
| ATACTTGTGGTTGGAACTAG+AGG | 0.557305 | 1_1:+67671371 | Msa0038270:CDS |
| ACATGAGATGGAGTTGGCAG+AGG | 0.558918 | 1_1:-67677097 | None:intergenic |
| TAAATTCTCAACATTGAGCT+CGG | 0.559134 | 1_1:-67676858 | None:intergenic |
| TGGTGATCCTCGAGTATTGG+CGG | 0.559807 | 1_1:+67672215 | Msa0038270:CDS |
| GGTGATCCTCGAGTATTGGC+GGG | 0.564567 | 1_1:+67672216 | Msa0038270:CDS |
| CTGAGCTGTGAAGGGAATGC+CGG | 0.567875 | 1_1:-67673235 | None:intergenic |
| TGGTGTTGTTTGCCTTGTGG+TGG | 0.568892 | 1_1:+67677175 | Msa0038270:CDS |
| TCTAATCACTCACCATATGC+GGG | 0.570202 | 1_1:-67673276 | None:intergenic |
| TTGTTGGTTACTGTTTCTTG+AGG | 0.570659 | 1_1:+67674766 | Msa0038270:CDS |
| CAGACTGTCAGAGGATGAGA+AGG | 0.575642 | 1_1:+67670980 | Msa0038270:CDS |
| ACATCTTCTTCACAATGCCA+TGG | 0.575887 | 1_1:+67673710 | Msa0038270:CDS |
| CTTGGTTTCGGAACAAGATG+AGG | 0.576658 | 1_1:-67674305 | None:intergenic |
| TCCCTAGATTGCCCCAACCT+CGG | 0.576992 | 1_1:-67675814 | None:intergenic |
| CTTTGGTTAGATATTTCAGT+CGG | 0.578080 | 1_1:-67673150 | None:intergenic |
| GCAGAGGTAGCTCATCAGGC+AGG | 0.581068 | 1_1:-67677081 | None:intergenic |
| CATGAGGGCATTCCTCAAGA+AGG | 0.582608 | 1_1:-67676361 | None:intergenic |
| TTTGAAGAGTCGGTAGCGAG+CGG | 0.585117 | 1_1:+67671296 | Msa0038270:CDS |
| TCTTCCACATGAGATGGAGT+TGG | 0.586284 | 1_1:-67677103 | None:intergenic |
| AAGTGGTGTTGTTTGCCTTG+TGG | 0.588246 | 1_1:+67677172 | Msa0038270:CDS |
| ATTCAAATAAATCAGTTCCA+CGG | 0.594368 | 1_1:+67671336 | Msa0038270:CDS |
| CTTACATAAAGAACTCTGCT+AGG | 0.595184 | 1_1:+67677482 | Msa0038270:three_prime_UTR |
| GGAGAGGGGAAGCCAATCAT+CGG | 0.595295 | 1_1:+67669724 | Msa0038270:CDS |
| TCCTATACAAAATGTTTGAG+GGG | 0.595295 | 1_1:-67677419 | None:intergenic |
| CATTGGAGAAATTCCTCCCG+TGG | 0.595314 | 1_1:-67674807 | None:intergenic |
| CTGATATGGTGGGGAATGCG+AGG | 0.599449 | 1_1:+67674176 | Msa0038270:CDS |
| GATATTTCAGTCGGTCCAGA+CGG | 0.599453 | 1_1:-67673141 | None:intergenic |
| ATGAATTTGCAGGTGCATCA+TGG | 0.601724 | 1_1:+67676525 | Msa0038270:intron |
| ACATCTTGCTGAAGCCCTTG+GGG | 0.602070 | 1_1:+67673678 | Msa0038270:CDS |
| TGCCTGAAGTCTCTTCGCAA+TGG | 0.604421 | 1_1:-67671414 | None:intergenic |
| TAACCAAAGAAAGCAGCTGA+AGG | 0.605409 | 1_1:+67673164 | Msa0038270:CDS |
| TTGTGGATCTACTGATATGG+TGG | 0.606875 | 1_1:+67674165 | Msa0038270:CDS |
| CAATTCAAGTATCAAGGTCA+AGG | 0.607566 | 1_1:-67669248 | None:intergenic |
| AATCCAAAATATAAAGGAGG+CGG | 0.607992 | 1_1:-67674843 | None:intergenic |
| GGGTGGGGAAATGCATATGT+TGG | 0.608825 | 1_1:-67673983 | None:intergenic |
| GATCAATGACAGAAAAGAGA+GGG | 0.613379 | 1_1:+67670931 | Msa0038270:CDS |
| ATAATAGCCTGAGCTGTGAA+GGG | 0.613818 | 1_1:-67673243 | None:intergenic |
| TGAGGAAACAACCAATCATG+AGG | 0.622137 | 1_1:-67676377 | None:intergenic |
| AAGTTGATTGAGAGTGAAGA+TGG | 0.624389 | 1_1:+67677025 | Msa0038270:CDS |
| AATATTGGACAGACTGTCAG+AGG | 0.625882 | 1_1:+67670971 | Msa0038270:CDS |
| AGATGTGAATAGGCACCCCA+AGG | 0.626183 | 1_1:-67673693 | None:intergenic |
| GTTACTTCTTTGCCACACAA+AGG | 0.626419 | 1_1:+67669749 | Msa0038270:CDS |
| TGTGGATCTACTGATATGGT+GGG | 0.628477 | 1_1:+67674166 | Msa0038270:CDS |
| TCATGGTGGAGCGGGAACCA+CGG | 0.634029 | 1_1:+67676542 | Msa0038270:CDS |
| ATCACTCACCATATGCGGGA+GGG | 0.634649 | 1_1:-67673272 | None:intergenic |
| AAAATTCATGCTCCAGCCAG+AGG | 0.634737 | 1_1:+67676892 | Msa0038270:CDS |
| GGACTCCACATATAGGCAGT+TGG | 0.634912 | 1_1:-67674284 | None:intergenic |
| GATAAGTTAGTTAGTGTGAG+AGG | 0.638386 | 1_1:+67669653 | Msa0038270:CDS |
| CTAACCACAGCAGAACATTG+AGG | 0.638399 | 1_1:-67676395 | None:intergenic |
| TCTGCCAACTCCATCTCATG+TGG | 0.640246 | 1_1:+67677099 | Msa0038270:CDS |
| GCAGGTGCATCATGGTGGAG+CGG | 0.640647 | 1_1:+67676533 | Msa0038270:intron |
| TGAGTCAAACTATCAACCAC+GGG | 0.640938 | 1_1:+67674791 | Msa0038270:CDS |
| GAGGTAGCTCATCAGGCAGG+TGG | 0.641397 | 1_1:-67677078 | None:intergenic |
| TTACATCCCGCCAATACTCG+AGG | 0.642325 | 1_1:-67672222 | None:intergenic |
| GCATACTTCAGCATGTATCG+TGG | 0.647313 | 1_1:+67674245 | Msa0038270:CDS |
| AATCACTCACCATATGCGGG+AGG | 0.647697 | 1_1:-67673273 | None:intergenic |
| CCTATACAAAATGTTTGAGG+GGG | 0.648449 | 1_1:-67677418 | None:intergenic |
| TCCATCTCATGTGGAAGACG+AGG | 0.650089 | 1_1:+67677108 | Msa0038270:CDS |
| GTAAATTTCTATCCTCTGGG+TGG | 0.653398 | 1_1:+67672195 | Msa0038270:CDS |
| ATTCACCTTCATCTAAGGAG+AGG | 0.655648 | 1_1:+67669708 | Msa0038270:CDS |
| AGTATGACAATTTGTAACCG+TGG | 0.656264 | 1_1:-67671353 | None:intergenic |
| CATCTTGTTCCGAAACCAAG+TGG | 0.657325 | 1_1:+67674308 | Msa0038270:CDS |
| AAAATCTACACACCACCACA+AGG | 0.658594 | 1_1:-67677187 | None:intergenic |
| ACCAATTAAGAGGACTGGAG+TGG | 0.659642 | 1_1:-67677132 | None:intergenic |
| AGATCAATGACAGAAAAGAG+AGG | 0.660701 | 1_1:+67670930 | Msa0038270:CDS |
| GATGTGAATAGGCACCCCAA+GGG | 0.663373 | 1_1:-67673692 | None:intergenic |
| AATGAGCACAAACCTTTGTG+TGG | 0.663563 | 1_1:-67669761 | None:intergenic |
| CCAAATCCAAAATATAAAGG+AGG | 0.663826 | 1_1:-67674846 | None:intergenic |
| GAGGAAACAACCAATCATGA+GGG | 0.667450 | 1_1:-67676376 | None:intergenic |
| ATGAGTCAAACTATCAACCA+CGG | 0.669416 | 1_1:+67674790 | Msa0038270:CDS |
| TCACCTTCATCTAAGGAGAG+GGG | 0.681355 | 1_1:+67669710 | Msa0038270:CDS |
| GGCTACAGGATTAAAATCTG+GGG | 0.686247 | 1_1:+67676563 | Msa0038270:CDS |
| GTCAAACTATCAACCACGGG+AGG | 0.710066 | 1_1:+67674794 | Msa0038270:CDS |
| CTTTAAAAGAGACAGAACAA+CGG | 0.730411 | 1_1:+67675780 | Msa0038270:CDS |
| AATTTGCAGGTGCATCATGG+TGG | 0.732739 | 1_1:+67676528 | Msa0038270:intron |
| CAACGGGGAATTATCGACCG+AGG | 0.734586 | 1_1:+67675797 | Msa0038270:CDS |
| ACTCGAGGATCACCACCCAG+AGG | 0.762040 | 1_1:-67672207 | None:intergenic |
| GTGGATCTACTGATATGGTG+GGG | 0.771351 | 1_1:+67674167 | Msa0038270:CDS |
| TTAAAAGAGACAGAACAACG+GGG | 0.864368 | 1_1:+67675782 | Msa0038270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATAAATTATTAAA+AGG | - | chr1_1:67672254-67672273 | None:intergenic | 0.0% |
| !! | TTAATAATTAATTTATATTT+CGG | + | chr1_1:67672274-67672293 | Msa0038270:intron | 0.0% |
| !! | TTAAAATTATATAAAAATGG+TGG | + | chr1_1:67669166-67669185 | Msa0038270:five_prime_UTR | 10.0% |
| !! | AGTTATTTAAATAATAGATA+TGG | + | chr1_1:67673098-67673117 | Msa0038270:intron | 10.0% |
| !!! | TTTAATTATATTTTTGATTC+CGG | + | chr1_1:67673641-67673660 | Msa0038270:intron | 10.0% |
| !!! | TACATTTTTTAAAAATTTAC+AGG | + | chr1_1:67673960-67673979 | Msa0038270:intron | 10.0% |
| !!! | AATATATATTTTCTATTACT+AGG | + | chr1_1:67675965-67675984 | Msa0038270:intron | 10.0% |
| !!! | ATCAATTTTTAAACTTAATA+TGG | - | chr1_1:67676203-67676222 | None:intergenic | 10.0% |
| !!! | ATTTTTTGTTTTTGAAAACT+CGG | + | chr1_1:67670149-67670168 | Msa0038270:intron | 15.0% |
| !! | TATACTTAAAGAAAAAGAAA+AGG | - | chr1_1:67670446-67670465 | None:intergenic | 15.0% |
| !! | ACAAAAACTTCAATAAAATT+GGG | - | chr1_1:67670516-67670535 | None:intergenic | 15.0% |
| !!! | ATACATTTTGTTATATTCAA+TGG | + | chr1_1:67671515-67671534 | Msa0038270:intron | 15.0% |
| !!! | TGTTTATGAATTTTACATTT+TGG | + | chr1_1:67672038-67672057 | Msa0038270:intron | 15.0% |
| !! | TAATATTACTTAATTTCTCT+TGG | + | chr1_1:67672423-67672442 | Msa0038270:intron | 15.0% |
| !!! | TTATTTGGAAGTTTTTATAA+GGG | - | chr1_1:67672811-67672830 | None:intergenic | 15.0% |
| !! | ACATACTTAAAAACAAAAAT+AGG | - | chr1_1:67672988-67673007 | None:intergenic | 15.0% |
| !! | TATATACAAAAAATTACACA+TGG | + | chr1_1:67673369-67673388 | Msa0038270:intron | 15.0% |
| !! | ATATACAAAAAATTACACAT+GGG | + | chr1_1:67673370-67673389 | Msa0038270:intron | 15.0% |
| !! | ATAATTAAAAATTATGTGCT+AGG | - | chr1_1:67673630-67673649 | None:intergenic | 15.0% |
| !! | TAAAGATATAAAATCAATCA+TGG | + | chr1_1:67674653-67674672 | Msa0038270:intron | 15.0% |
| !! | AAAGATATAAAATCAATCAT+GGG | + | chr1_1:67674654-67674673 | Msa0038270:intron | 15.0% |
| !! | GAAAAATTTACAGAAAAAAA+AGG | - | chr1_1:67674943-67674962 | None:intergenic | 15.0% |
| !! | ATAAATAATACAAATGTACA+AGG | - | chr1_1:67675309-67675328 | None:intergenic | 15.0% |
| !!! | TTTTTTATCCATAATATACT+TGG | + | chr1_1:67676624-67676643 | Msa0038270:intron | 15.0% |
| !!! | AAATTAAGGTATTCAAATAA+GGG | - | chr1_1:67676740-67676759 | None:intergenic | 15.0% |
| !!! | GATTTTATTCATTACTAATT+AGG | + | chr1_1:67677247-67677266 | Msa0038270:three_prime_UTR | 15.0% |
| !! | TTATAGTTGGAAATTCAAAA+AGG | + | chr1_1:67669281-67669300 | Msa0038270:five_prime_UTR | 20.0% |
| !! | CTATGCTATTATATACAATA+AGG | - | chr1_1:67669925-67669944 | None:intergenic | 20.0% |
| !! | TAGATATGTCATAAGTATAT+AGG | + | chr1_1:67670088-67670107 | Msa0038270:intron | 20.0% |
| !! | TCTTTAAGTATATTATACTC+TGG | + | chr1_1:67670454-67670473 | Msa0038270:intron | 20.0% |
| !! | GACAAAAACTTCAATAAAAT+TGG | - | chr1_1:67670517-67670536 | None:intergenic | 20.0% |
| !! | TTTGTCAACATAAATAGATT+TGG | + | chr1_1:67670531-67670550 | Msa0038270:intron | 20.0% |
| !! | GGTTCTTTGTAAAAATAATT+AGG | + | chr1_1:67670552-67670571 | Msa0038270:intron | 20.0% |
| !!! | GATATGTTATTTAGTACAAA+GGG | + | chr1_1:67670640-67670659 | Msa0038270:intron | 20.0% |
| !!! | TATTTTCAATTGACAATACT+GGG | + | chr1_1:67670726-67670745 | Msa0038270:intron | 20.0% |
| !!! | AGAGATTGATTTCTTATAAT+TGG | + | chr1_1:67670807-67670826 | Msa0038270:intron | 20.0% |
| !! | TTCTTAAATTCTGTTCATAA+AGG | + | chr1_1:67670831-67670850 | Msa0038270:intron | 20.0% |
| !!! | TTTTGTTCCTTAAATTAACA+CGG | + | chr1_1:67671574-67671593 | Msa0038270:intron | 20.0% |
| !! | ATTAAACTGAATGAAATTGT+CGG | + | chr1_1:67671645-67671664 | Msa0038270:intron | 20.0% |
| !!! | TCATTTTGTTTACTTAGTTT+AGG | + | chr1_1:67671749-67671768 | Msa0038270:intron | 20.0% |
| !! | AAAATTTAGAAACCCTATTA+AGG | - | chr1_1:67671854-67671873 | None:intergenic | 20.0% |
| !!! | TAATAGGGTTTCTAAATTTT+AGG | + | chr1_1:67671854-67671873 | Msa0038270:intron | 20.0% |
| !!! | AATAGGGTTTCTAAATTTTA+GGG | + | chr1_1:67671855-67671874 | Msa0038270:intron | 20.0% |
| !!! | ATAGCTTTATTTTTGTAAGT+TGG | + | chr1_1:67671908-67671927 | Msa0038270:intron | 20.0% |
| !!! | TAGCTTTATTTTTGTAAGTT+GGG | + | chr1_1:67671909-67671928 | Msa0038270:intron | 20.0% |
| !! | ATGATTAACACTTGAAAATT+TGG | - | chr1_1:67672550-67672569 | None:intergenic | 20.0% |
| !!! | AATTTTCAAGTGTTAATCAT+AGG | + | chr1_1:67672550-67672569 | Msa0038270:intron | 20.0% |
| !!! | TGTTGAAGTATCTATTTATA+CGG | - | chr1_1:67672581-67672600 | None:intergenic | 20.0% |
| !!! | GTTATTTGGAAGTTTTTATA+AGG | - | chr1_1:67672812-67672831 | None:intergenic | 20.0% |
| !! | TTTAAGCATATATAATGAGT+TGG | - | chr1_1:67673063-67673082 | None:intergenic | 20.0% |
| !! | TTTAAATAATAGATATGGCA+AGG | + | chr1_1:67673103-67673122 | Msa0038270:intron | 20.0% |
| !! | TTTATTTGATCAAGTAAGAT+GGG | - | chr1_1:67673335-67673354 | None:intergenic | 20.0% |
| !!! | TTTTATTTGATCAAGTAAGA+TGG | - | chr1_1:67673336-67673355 | None:intergenic | 20.0% |
| !! | ATCAACTATAAAAGAACTAT+TGG | - | chr1_1:67673485-67673504 | None:intergenic | 20.0% |
| !!! | CGTTTGAAAAAGTATAATTA+AGG | - | chr1_1:67674373-67674392 | None:intergenic | 20.0% |
| !!! | ATCATTCAAGTATTTGAAAT+AGG | + | chr1_1:67674405-67674424 | Msa0038270:intron | 20.0% |
| !!! | TTGTGAGAATATAAAGTTTT+TGG | + | chr1_1:67674456-67674475 | Msa0038270:intron | 20.0% |
| !!! | AATAACTTTGAAGATTAAAC+AGG | - | chr1_1:67674569-67674588 | None:intergenic | 20.0% |
| !!! | TTTCTGTAAATTTTTCTGTT+TGG | + | chr1_1:67674947-67674966 | Msa0038270:intron | 20.0% |
| !!! | TGATTCATTAGCTTAAATAT+AGG | - | chr1_1:67675033-67675052 | None:intergenic | 20.0% |
| !! | ATATTTAAGCTAATGAATCA+TGG | + | chr1_1:67675033-67675052 | Msa0038270:intron | 20.0% |
| !!! | TTTTCACTTTTACATCTAAA+TGG | + | chr1_1:67675178-67675197 | Msa0038270:intron | 20.0% |
| !!! | ATAACATCTGTTGTTATTTT+AGG | - | chr1_1:67675752-67675771 | None:intergenic | 20.0% |
| !! | AATAACAACAGATGTTATAT+TGG | + | chr1_1:67675754-67675773 | Msa0038270:CDS | 20.0% |
| !! | ACTTAATATGGTCAAAATTA+GGG | - | chr1_1:67676191-67676210 | None:intergenic | 20.0% |
| !! | AACTTAATATGGTCAAAATT+AGG | - | chr1_1:67676192-67676211 | None:intergenic | 20.0% |
| !! | ATACAAATCCAAGTATATTA+TGG | - | chr1_1:67676635-67676654 | None:intergenic | 20.0% |
| !!! | GGATTTTATTGACATTTTTT+TGG | + | chr1_1:67676665-67676684 | Msa0038270:intron | 20.0% |
| !!! | AATTAAGGTATTCAAATAAG+GGG | - | chr1_1:67676739-67676758 | None:intergenic | 20.0% |
| !!! | CAAATTAAGGTATTCAAATA+AGG | - | chr1_1:67676741-67676760 | None:intergenic | 20.0% |
| !!! | ATTACTAATTAGGTTTTGAT+AGG | + | chr1_1:67677257-67677276 | Msa0038270:three_prime_UTR | 20.0% |
| ! | GTAGTAGTAGTTCAAATTAA+TGG | - | chr1_1:67669215-67669234 | None:intergenic | 25.0% |
| ! | TTACCATATCCTATGAATTT+AGG | + | chr1_1:67670032-67670051 | Msa0038270:intron | 25.0% |
| ! | TTATTCCTTCCTAAATTCAT+AGG | - | chr1_1:67670044-67670063 | None:intergenic | 25.0% |
| ! | TAGGATCAATGTAAAGATTT+AGG | + | chr1_1:67670107-67670126 | Msa0038270:intron | 25.0% |
| ! | AGGATCAATGTAAAGATTTA+GGG | + | chr1_1:67670108-67670127 | Msa0038270:intron | 25.0% |
| ! | AAAGCAATGATAAAGCATAA+AGG | - | chr1_1:67670390-67670409 | None:intergenic | 25.0% |
| !! | TCAATAAAATTGGGCTTTTT+AGG | - | chr1_1:67670507-67670526 | None:intergenic | 25.0% |
| ! | TGTAAAAATAATTAGGTGCA+TGG | + | chr1_1:67670559-67670578 | Msa0038270:intron | 25.0% |
| ! | GTAAAAATAATTAGGTGCAT+GGG | + | chr1_1:67670560-67670579 | Msa0038270:intron | 25.0% |
| ! | AACATATCCCAAAACAATAA+CGG | - | chr1_1:67670628-67670647 | None:intergenic | 25.0% |
| !! | GGATATGTTATTTAGTACAA+AGG | + | chr1_1:67670639-67670658 | Msa0038270:intron | 25.0% |
| ! | GTATTGTCAATTGAAAATAG+TGG | - | chr1_1:67670725-67670744 | None:intergenic | 25.0% |
| !! | CTATTTTCAATTGACAATAC+TGG | + | chr1_1:67670725-67670744 | Msa0038270:intron | 25.0% |
| !! | ATTTTCAATTGACAATACTG+GGG | + | chr1_1:67670727-67670746 | Msa0038270:intron | 25.0% |
| ! | AGAAATCAATCTCTTAACAA+AGG | - | chr1_1:67670801-67670820 | None:intergenic | 25.0% |
| ! | AAATTCTGTTCATAAAGGTT+TGG | + | chr1_1:67670836-67670855 | Msa0038270:intron | 25.0% |
| ! | TAGTGAAGATACAAAAAGAT+GGG | + | chr1_1:67671210-67671229 | Msa0038270:CDS | 25.0% |
| ! | ATTCAAATAAATCAGTTCCA+CGG | + | chr1_1:67671336-67671355 | Msa0038270:CDS | 25.0% |
| ! | ATTGCATCTTAAACTAATTG+TGG | + | chr1_1:67671446-67671465 | Msa0038270:intron | 25.0% |
| ! | GTGTTAATTTAAGGAACAAA+AGG | - | chr1_1:67671575-67671594 | None:intergenic | 25.0% |
| ! | TTTGTTCCTTAAATTAACAC+GGG | + | chr1_1:67671575-67671594 | Msa0038270:intron | 25.0% |
| ! | CTGTATTCTGATTTAATATG+AGG | + | chr1_1:67671668-67671687 | Msa0038270:intron | 25.0% |
| !!! | ATTTTAGGGAAGACATATTA+TGG | + | chr1_1:67671869-67671888 | Msa0038270:intron | 25.0% |
| !!! | AGCTTTATTTTTGTAAGTTG+GGG | + | chr1_1:67671910-67671929 | Msa0038270:intron | 25.0% |
| !! | TTTTGAACCGAATTATTTGA+AGG | + | chr1_1:67671989-67672008 | Msa0038270:intron | 25.0% |
| ! | TTTGAACCGAATTATTTGAA+GGG | + | chr1_1:67671990-67672009 | Msa0038270:intron | 25.0% |
| ! | TTAGTTCAAGTATGAAAGTA+TGG | - | chr1_1:67672090-67672109 | None:intergenic | 25.0% |
| ! | CTAATTTCAAGACATTTGTA+AGG | + | chr1_1:67672163-67672182 | Msa0038270:CDS | 25.0% |
| ! | AAGTTAAACAAAGTACAAGT+AGG | - | chr1_1:67672300-67672319 | None:intergenic | 25.0% |
| ! | ACCTGTTAAATTTAGTATTC+AGG | + | chr1_1:67672360-67672379 | Msa0038270:intron | 25.0% |
| ! | ACCTGAATACTAAATTTAAC+AGG | - | chr1_1:67672364-67672383 | None:intergenic | 25.0% |
| !! | CATTTTATAGTAATAGCTTG+AGG | - | chr1_1:67672521-67672540 | None:intergenic | 25.0% |
| ! | TAAATAACCAATTGTAGTGT+AGG | + | chr1_1:67672728-67672747 | Msa0038270:intron | 25.0% |
| ! | AAATAACCAATTGTAGTGTA+GGG | + | chr1_1:67672729-67672748 | Msa0038270:intron | 25.0% |
| !! | TAATGAGTTGGATAGAAAAT+GGG | - | chr1_1:67673051-67673070 | None:intergenic | 25.0% |
| !! | ATAATGAGTTGGATAGAAAA+TGG | - | chr1_1:67673052-67673071 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTGCCATCTAAAA+AGG | - | chr1_1:67673431-67673450 | None:intergenic | 25.0% |
| !!! | TATAGTTGATTTTTCTTTCG+AGG | + | chr1_1:67673495-67673514 | Msa0038270:intron | 25.0% |
| ! | CTTTGCAATAAAAGAACAAT+TGG | - | chr1_1:67673529-67673548 | None:intergenic | 25.0% |
| ! | TGAAATATTGTTTCAGCAAA+AGG | - | chr1_1:67674049-67674068 | None:intergenic | 25.0% |
| ! | GTTAAAAGTCATTATCCTTA+AGG | - | chr1_1:67674715-67674734 | None:intergenic | 25.0% |
| !!! | TTTTAACTAATTTGCAGACT+GGG | + | chr1_1:67674728-67674747 | Msa0038270:intron | 25.0% |
| !!! | TTTCTCCAATGGATTAAAAA+AGG | + | chr1_1:67674819-67674838 | Msa0038270:CDS | 25.0% |
| !!! | CTCCTTTATATTTTGGATTT+GGG | + | chr1_1:67674847-67674866 | Msa0038270:CDS | 25.0% |
| !!! | CAGAAAAAAAAGGCATTAAT+AGG | - | chr1_1:67674933-67674952 | None:intergenic | 25.0% |
| ! | AACAAATACTGACACTATAA+TGG | - | chr1_1:67674991-67675010 | None:intergenic | 25.0% |
| ! | GCTGTTATCATAACATAAAT+AGG | + | chr1_1:67675339-67675358 | Msa0038270:intron | 25.0% |
| !! | TTAAGTTGTTAAACCAAACA+GGG | - | chr1_1:67675365-67675384 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTAAACCAAAC+AGG | - | chr1_1:67675366-67675385 | None:intergenic | 25.0% |
| ! | ATTATTTGAGCTTATCTACT+GGG | - | chr1_1:67675602-67675621 | None:intergenic | 25.0% |
| ! | TAAGCTCAAATAATCTGTTT+CGG | + | chr1_1:67675608-67675627 | Msa0038270:intron | 25.0% |
| !! | AAATATTTCTAATCGTCTCA+AGG | - | chr1_1:67675668-67675687 | None:intergenic | 25.0% |
| ! | AATGTATGTCAATGATTGAA+TGG | + | chr1_1:67675942-67675961 | Msa0038270:intron | 25.0% |
| !! | TGAACTAATTTTTATCCAGT+CGG | + | chr1_1:67676128-67676147 | Msa0038270:intron | 25.0% |
| !! | CATTATGTTATGTGCATTTT+AGG | + | chr1_1:67676270-67676289 | Msa0038270:intron | 25.0% |
| ! | TTTCAATTTATGCTTTCTTG+TGG | + | chr1_1:67676418-67676437 | Msa0038270:intron | 25.0% |
| ! | TTCAATTTATGCTTTCTTGT+GGG | + | chr1_1:67676419-67676438 | Msa0038270:intron | 25.0% |
| ! | CGTAAAGAAGAAAGAAAAAT+TGG | + | chr1_1:67676449-67676468 | Msa0038270:intron | 25.0% |
| ! | AAAGAAGAAAGAAAAATTGG+AGG | + | chr1_1:67676452-67676471 | Msa0038270:intron | 25.0% |
| ! | AAGAAGAAAGAAAAATTGGA+GGG | + | chr1_1:67676453-67676472 | Msa0038270:intron | 25.0% |
| ! | ATGTCAATAAAATCCTAACA+CGG | - | chr1_1:67676660-67676679 | None:intergenic | 25.0% |
| !! | ATTAAGGTATTCAAATAAGG+GGG | - | chr1_1:67676738-67676757 | None:intergenic | 25.0% |
| ! | TAGAATACATCAAAAAGAGT+TGG | + | chr1_1:67676814-67676833 | Msa0038270:CDS | 25.0% |
| ! | AGAATACATCAAAAAGAGTT+GGG | + | chr1_1:67676815-67676834 | Msa0038270:CDS | 25.0% |
| ! | ACATCAAGAGTGAATATTAT+TGG | - | chr1_1:67676971-67676990 | None:intergenic | 25.0% |
| !!! | AACTTTCTGTTATTTCAGAA+TGG | + | chr1_1:67677280-67677299 | Msa0038270:three_prime_UTR | 25.0% |
| ! | TGAACATTTATTGTTAGTCA+AGG | - | chr1_1:67677370-67677389 | None:intergenic | 25.0% |
| TTGACCTTGATACTTGAATT+GGG | + | chr1_1:67669250-67669269 | Msa0038270:five_prime_UTR | 30.0% | |
| ATAACCCAATTCAAGTATCA+AGG | - | chr1_1:67669257-67669276 | None:intergenic | 30.0% | |
| ATTGAAACACAAAGAACGTT+CGG | - | chr1_1:67669324-67669343 | None:intergenic | 30.0% | |
| TTTGTGTTTCAATGACTGTT+GGG | + | chr1_1:67669331-67669350 | Msa0038270:five_prime_UTR | 30.0% | |
| !! | TTTGTGTTTTGTTCTTTCTG+AGG | + | chr1_1:67669415-67669434 | Msa0038270:five_prime_UTR | 30.0% |
| ACTGATTATTGTGATTGTGA+TGG | + | chr1_1:67669559-67669578 | Msa0038270:exon | 30.0% | |
| CTGATTATTGTGATTGTGAT+GGG | + | chr1_1:67669560-67669579 | Msa0038270:exon | 30.0% | |
| AGAAGTAGTTGAAGATGAAA+AGG | + | chr1_1:67669610-67669629 | Msa0038270:CDS | 30.0% | |
| GAAGTAGTTGAAGATGAAAA+GGG | + | chr1_1:67669611-67669630 | Msa0038270:CDS | 30.0% | |
| TGAAAAGGGTCTAAGAAAAA+TGG | + | chr1_1:67669625-67669644 | Msa0038270:CDS | 30.0% | |
| CTTCCTAAATTCATAGGATA+TGG | - | chr1_1:67670038-67670057 | None:intergenic | 30.0% | |
| CATATCCTATGAATTTAGGA+AGG | + | chr1_1:67670036-67670055 | Msa0038270:intron | 30.0% | |
| GGATCAATGTAAAGATTTAG+GGG | + | chr1_1:67670109-67670128 | Msa0038270:intron | 30.0% | |
| GATCAATGTAAAGATTTAGG+GGG | + | chr1_1:67670110-67670129 | Msa0038270:intron | 30.0% | |
| !! | CTAAGTCTATGGCTTTAAAT+GGG | - | chr1_1:67670233-67670252 | None:intergenic | 30.0% |
| !!! | TATACTCTGGATTGCTTTTT+AGG | + | chr1_1:67670467-67670486 | Msa0038270:intron | 30.0% |
| ! | GAACAAACCGTTATTGTTTT+GGG | + | chr1_1:67670618-67670637 | Msa0038270:intron | 30.0% |
| TTGTCAAATAGTGACTATTG+CGG | + | chr1_1:67670663-67670682 | Msa0038270:intron | 30.0% | |
| ! | TTTTCAATTGACAATACTGG+GGG | + | chr1_1:67670728-67670747 | Msa0038270:intron | 30.0% |
| ! | AAGCACAACCTTGAAATTTT+AGG | - | chr1_1:67671035-67671054 | None:intergenic | 30.0% |
| ! | CATCTTTTTGTATCTTCACT+AGG | - | chr1_1:67671211-67671230 | None:intergenic | 30.0% |
| CTAGTGAAGATACAAAAAGA+TGG | + | chr1_1:67671209-67671228 | Msa0038270:CDS | 30.0% | |
| GTTACAAATTGTCATACTTG+TGG | + | chr1_1:67671358-67671377 | Msa0038270:CDS | 30.0% | |
| ACATAATGTTACGTGATATC+CGG | - | chr1_1:67671722-67671741 | None:intergenic | 30.0% | |
| ! | TTATGCTGTTTGTGATGTAT+TGG | + | chr1_1:67671779-67671798 | Msa0038270:intron | 30.0% |
| TTGCTTCCCTTCAAATAATT+CGG | - | chr1_1:67671999-67672018 | None:intergenic | 30.0% | |
| TAATACCAATGTTTACTTGC+AGG | + | chr1_1:67672107-67672126 | Msa0038270:intron | 30.0% | |
| GATATAAAGCAGCTAAAAGA+GGG | - | chr1_1:67672335-67672354 | None:intergenic | 30.0% | |
| !! | CTCTTTTAGCTGCTTTATAT+CGG | + | chr1_1:67672334-67672353 | Msa0038270:intron | 30.0% |
| TAGAATGCAGTGTTATATCA+TGG | + | chr1_1:67672396-67672415 | Msa0038270:intron | 30.0% | |
| GACTTACGACAAATTTGAAT+TGG | + | chr1_1:67672628-67672647 | Msa0038270:intron | 30.0% | |
| CGACAAATTTGAATTGGATA+TGG | + | chr1_1:67672634-67672653 | Msa0038270:intron | 30.0% | |
| !!! | AAGAGCTAATTGTTTTTGCT+TGG | - | chr1_1:67672679-67672698 | None:intergenic | 30.0% |
| ! | AAGCAAAAACAATTAGCTCT+TGG | + | chr1_1:67672678-67672697 | Msa0038270:intron | 30.0% |
| TAAGGGATCATTATGTTTAG+AGG | - | chr1_1:67672794-67672813 | None:intergenic | 30.0% | |
| ! | AAGCTTTGGTTGTTGTTATT+TGG | - | chr1_1:67672826-67672845 | None:intergenic | 30.0% |
| AATAACAACAACCAAAGCTT+AGG | + | chr1_1:67672826-67672845 | Msa0038270:intron | 30.0% | |
| TTAGCTTAATCTTCAATGCA+AGG | - | chr1_1:67672955-67672974 | None:intergenic | 30.0% | |
| ATAGATATGGCAAGGAATAA+AGG | + | chr1_1:67673111-67673130 | Msa0038270:intron | 30.0% | |
| CTTTGGTTAGATATTTCAGT+CGG | - | chr1_1:67673153-67673172 | None:intergenic | 30.0% | |
| AAAAATTACACATGGGTGAA+AGG | + | chr1_1:67673377-67673396 | Msa0038270:intron | 30.0% | |
| ! | TAATGTTTGCAAGTTTTCCA+AGG | + | chr1_1:67673602-67673621 | Msa0038270:intron | 30.0% |
| ATTGTGAAGAAGATGTGAAT+AGG | - | chr1_1:67673706-67673725 | None:intergenic | 30.0% | |
| TAATTTCTTGCCTTCCTTAT+TGG | + | chr1_1:67674095-67674114 | Msa0038270:intron | 30.0% | |
| TTATATAAGACAGCTGCAAA+TGG | - | chr1_1:67674145-67674164 | None:intergenic | 30.0% | |
| TAATTGTGGATCTACTGATA+TGG | + | chr1_1:67674162-67674181 | Msa0038270:CDS | 30.0% | |
| AGGTAACTACTATAGTTTAG+TGG | - | chr1_1:67674549-67674568 | None:intergenic | 30.0% | |
| ! | ATATTGTATGAAGCACCATA+AGG | + | chr1_1:67674597-67674616 | Msa0038270:intron | 30.0% |
| CAACTTAAGCTTAGAAGAAT+TGG | + | chr1_1:67674688-67674707 | Msa0038270:intron | 30.0% | |
| !! | CTTTTAACTAATTTGCAGAC+TGG | + | chr1_1:67674727-67674746 | Msa0038270:intron | 30.0% |
| ! | TTTAACTAATTTGCAGACTG+GGG | + | chr1_1:67674729-67674748 | Msa0038270:intron | 30.0% |
| AATCCAAAATATAAAGGAGG+CGG | - | chr1_1:67674846-67674865 | None:intergenic | 30.0% | |
| CCAAATCCAAAATATAAAGG+AGG | - | chr1_1:67674849-67674868 | None:intergenic | 30.0% | |
| !! | CCTCCTTTATATTTTGGATT+TGG | + | chr1_1:67674846-67674865 | Msa0038270:CDS | 30.0% |
| CTCCCAAATCCAAAATATAA+AGG | - | chr1_1:67674852-67674871 | None:intergenic | 30.0% | |
| AAATACTGACACTATAATGG+TGG | - | chr1_1:67674988-67675007 | None:intergenic | 30.0% | |
| TTTAAGCTAATGAATCATGG+TGG | + | chr1_1:67675036-67675055 | Msa0038270:intron | 30.0% | |
| TTAAGCTAATGAATCATGGT+GGG | + | chr1_1:67675037-67675056 | Msa0038270:intron | 30.0% | |
| CATATTTGTCATGTCTCTAA+TGG | - | chr1_1:67675096-67675115 | None:intergenic | 30.0% | |
| TTACAATCCAAACATGTAGT+GGG | - | chr1_1:67675148-67675167 | None:intergenic | 30.0% | |
| ATTACAATCCAAACATGTAG+TGG | - | chr1_1:67675149-67675168 | None:intergenic | 30.0% | |
| !! | TGTTTTCATGTTCTAGACAA+GGG | - | chr1_1:67675242-67675261 | None:intergenic | 30.0% |
| !! | ATGTTTTCATGTTCTAGACA+AGG | - | chr1_1:67675243-67675262 | None:intergenic | 30.0% |
| CAACTTAATTAAGCGCTTAT+AGG | + | chr1_1:67675377-67675396 | Msa0038270:intron | 30.0% | |
| !!! | AAACACTTTTGAGACTGTTT+AGG | - | chr1_1:67675577-67675596 | None:intergenic | 30.0% |
| GATTATTTGAGCTTATCTAC+TGG | - | chr1_1:67675603-67675622 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAGGATCTTCAAG+AGG | - | chr1_1:67675740-67675759 | None:intergenic | 30.0% |
| ! | CTTTAAAAGAGACAGAACAA+CGG | + | chr1_1:67675780-67675799 | Msa0038270:CDS | 30.0% |
| TTTAAAAGAGACAGAACAAC+GGG | + | chr1_1:67675781-67675800 | Msa0038270:CDS | 30.0% | |
| ATCTGAAAAAAGCGAAACAT+AGG | - | chr1_1:67675873-67675892 | None:intergenic | 30.0% | |
| CGATGATGAATCTAAGTTAA+TGG | - | chr1_1:67676021-67676040 | None:intergenic | 30.0% | |
| AGAAGAAAGAAAAATTGGAG+GGG | + | chr1_1:67676454-67676473 | Msa0038270:intron | 30.0% | |
| AGAATTGATCTCCAAAGAAT+GGG | - | chr1_1:67676784-67676803 | None:intergenic | 30.0% | |
| AAGAATTGATCTCCAAAGAA+TGG | - | chr1_1:67676785-67676804 | None:intergenic | 30.0% | |
| !! | TCTTTGGAGATCAATTCTTT+TGG | + | chr1_1:67676786-67676805 | Msa0038270:CDS | 30.0% |
| !! | CTTTGGAGATCAATTCTTTT+GGG | + | chr1_1:67676787-67676806 | Msa0038270:CDS | 30.0% |
| ! | TTTGGAGATCAATTCTTTTG+GGG | + | chr1_1:67676788-67676807 | Msa0038270:CDS | 30.0% |
| TAAATTCTCAACATTGAGCT+CGG | - | chr1_1:67676861-67676880 | None:intergenic | 30.0% | |
| GAAACTGTTTGCAATGATAA+AGG | - | chr1_1:67676939-67676958 | None:intergenic | 30.0% | |
| TATCATTGCAAACAGTTTCA+TGG | + | chr1_1:67676940-67676959 | Msa0038270:intron | 30.0% | |
| ATTCACTCTTGATGTATTTC+AGG | + | chr1_1:67676976-67676995 | Msa0038270:intron | 30.0% | |
| ! | ATGTATTTCAGGTGAAATCT+CGG | + | chr1_1:67676987-67677006 | Msa0038270:intron | 30.0% |
| AAAAAACCAATTAAGAGGAC+TGG | - | chr1_1:67677140-67677159 | None:intergenic | 30.0% | |
| TGGTCAAAAAACCAATTAAG+AGG | - | chr1_1:67677145-67677164 | None:intergenic | 30.0% | |
| ! | AGAATGGTAGCATAATGTTT+TGG | + | chr1_1:67677296-67677315 | Msa0038270:three_prime_UTR | 30.0% |
| TCCTATACAAAATGTTTGAG+GGG | - | chr1_1:67677422-67677441 | None:intergenic | 30.0% | |
| CTCCTATACAAAATGTTTGA+GGG | - | chr1_1:67677423-67677442 | None:intergenic | 30.0% | |
| CAATTCAAGTATCAAGGTCA+AGG | - | chr1_1:67669251-67669270 | None:intergenic | 35.0% | |
| CTTGACCTTGATACTTGAAT+TGG | + | chr1_1:67669249-67669268 | Msa0038270:five_prime_UTR | 35.0% | |
| GATACTTGAATTGGGTTATG+AGG | + | chr1_1:67669258-67669277 | Msa0038270:five_prime_UTR | 35.0% | |
| TTGGGTTATGAGGTTATAGT+TGG | + | chr1_1:67669268-67669287 | Msa0038270:five_prime_UTR | 35.0% | |
| CTTTGTGTTTCAATGACTGT+TGG | + | chr1_1:67669330-67669349 | Msa0038270:five_prime_UTR | 35.0% | |
| ! | GTTTTCAGAATCAGATTCCA+AGG | + | chr1_1:67669389-67669408 | Msa0038270:five_prime_UTR | 35.0% |
| GAACAAAACACAAAGTTCCT+TGG | - | chr1_1:67669409-67669428 | None:intergenic | 35.0% | |
| !! | TTTGTTCTTTCTGAGGTTGT+TGG | + | chr1_1:67669422-67669441 | Msa0038270:five_prime_UTR | 35.0% |
| !! | TGATTGTGATGGGTTGTAAT+GGG | + | chr1_1:67669570-67669589 | Msa0038270:exon | 35.0% |
| GATAAGTTAGTTAGTGTGAG+AGG | + | chr1_1:67669653-67669672 | Msa0038270:CDS | 35.0% | |
| AAGAAGTAACTTCCGATGAT+TGG | - | chr1_1:67669739-67669758 | None:intergenic | 35.0% | |
| ACACTAACACTAACATGTGT+TGG | - | chr1_1:67669817-67669836 | None:intergenic | 35.0% | |
| ! | TGTTTGTGTCGTTGTTTCAT+AGG | + | chr1_1:67669846-67669865 | Msa0038270:intron | 35.0% |
| ! | GTAGTCAACATATAGCTCTA+TGG | + | chr1_1:67669993-67670012 | Msa0038270:intron | 35.0% |
| ! | TATAGCTCTATGGAATCTTG+TGG | + | chr1_1:67670003-67670022 | Msa0038270:intron | 35.0% |
| !! | TTTTTGAAAACTCGGTATCC+AGG | + | chr1_1:67670157-67670176 | Msa0038270:intron | 35.0% |
| ! | AAATTAGTCGGTATTTTGCC+TGG | - | chr1_1:67670178-67670197 | None:intergenic | 35.0% |
| ! | GCAAAATACCGACTAATTTG+AGG | + | chr1_1:67670179-67670198 | Msa0038270:intron | 35.0% |
| !! | CCTAAGTCTATGGCTTTAAA+TGG | - | chr1_1:67670234-67670253 | None:intergenic | 35.0% |
| ! | CCATTTAAAGCCATAGACTT+AGG | + | chr1_1:67670231-67670250 | Msa0038270:intron | 35.0% |
| ! | GGTTTAATGGTGTTTGACTT+GGG | - | chr1_1:67670318-67670337 | None:intergenic | 35.0% |
| TGGTTTAATGGTGTTTGACT+TGG | - | chr1_1:67670319-67670338 | None:intergenic | 35.0% | |
| ACCATTAAACCAACCCAAAT+GGG | + | chr1_1:67670327-67670346 | Msa0038270:intron | 35.0% | |
| AAATTGTAACCCATTTGGGT+TGG | - | chr1_1:67670339-67670358 | None:intergenic | 35.0% | |
| GCACAAATTGTAACCCATTT+GGG | - | chr1_1:67670343-67670362 | None:intergenic | 35.0% | |
| AGCACAAATTGTAACCCATT+TGG | - | chr1_1:67670344-67670363 | None:intergenic | 35.0% | |
| ATGCTTTATCATTGCTTTGC+TGG | + | chr1_1:67670392-67670411 | Msa0038270:intron | 35.0% | |
| TGCTTTATCATTGCTTTGCT+GGG | + | chr1_1:67670393-67670412 | Msa0038270:intron | 35.0% | |
| !! | AAGAAAAGGCATTTCACAGA+AGG | - | chr1_1:67670432-67670451 | None:intergenic | 35.0% |
| ! | CGAACAAACCGTTATTGTTT+TGG | + | chr1_1:67670617-67670636 | Msa0038270:intron | 35.0% |
| TCAAATTCCACTATGCTACA+GGG | - | chr1_1:67670697-67670716 | None:intergenic | 35.0% | |
| TTCAAATTCCACTATGCTAC+AGG | - | chr1_1:67670698-67670717 | None:intergenic | 35.0% | |
| ATCAATCTCTTAACAAAGGC+AGG | - | chr1_1:67670797-67670816 | None:intergenic | 35.0% | |
| TCTCATCTTCAGCTATTAGT+GGG | - | chr1_1:67670899-67670918 | None:intergenic | 35.0% | |
| ATCTCATCTTCAGCTATTAG+TGG | - | chr1_1:67670900-67670919 | None:intergenic | 35.0% | |
| AGATCAATGACAGAAAAGAG+AGG | + | chr1_1:67670930-67670949 | Msa0038270:CDS | 35.0% | |
| GATCAATGACAGAAAAGAGA+GGG | + | chr1_1:67670931-67670950 | Msa0038270:CDS | 35.0% | |
| CAAGTTTCACTGTATGTGAA+TGG | + | chr1_1:67671009-67671028 | Msa0038270:intron | 35.0% | |
| GTGAATGGCCTAAAATTTCA+AGG | + | chr1_1:67671024-67671043 | Msa0038270:intron | 35.0% | |
| !! | GTTCCAATCTTTTGAAGAGT+CGG | + | chr1_1:67671286-67671305 | Msa0038270:CDS | 35.0% |
| AGTATGACAATTTGTAACCG+TGG | - | chr1_1:67671356-67671375 | None:intergenic | 35.0% | |
| CAAATTGTCATACTTGTGGT+TGG | + | chr1_1:67671362-67671381 | Msa0038270:CDS | 35.0% | |
| CTGAAACCCGTGTTAATTTA+AGG | - | chr1_1:67671584-67671603 | None:intergenic | 35.0% | |
| !! | GAACTTTGTATCACTTTTCC+CGG | + | chr1_1:67671700-67671719 | Msa0038270:intron | 35.0% |
| CATAATGTTACGTGATATCC+GGG | - | chr1_1:67671721-67671740 | None:intergenic | 35.0% | |
| TCCAAGTCAAGACCTTAATA+GGG | + | chr1_1:67671839-67671858 | Msa0038270:intron | 35.0% | |
| ! | CTTTTCCTTATTGAGCTGAT+TGG | + | chr1_1:67671942-67671961 | Msa0038270:intron | 35.0% |
| ATACTCCTGCAAGTAAACAT+TGG | - | chr1_1:67672115-67672134 | None:intergenic | 35.0% | |
| AATGTTTACTTGCAGGAGTA+TGG | + | chr1_1:67672114-67672133 | Msa0038270:intron | 35.0% | |
| TGGTGTAAATTTCTATCCTC+TGG | + | chr1_1:67672191-67672210 | Msa0038270:CDS | 35.0% | |
| GGTGTAAATTTCTATCCTCT+GGG | + | chr1_1:67672192-67672211 | Msa0038270:CDS | 35.0% | |
| CGATATAAAGCAGCTAAAAG+AGG | - | chr1_1:67672336-67672355 | None:intergenic | 35.0% | |
| !! | TCTCTTGGAGTTTTCTGAAA+AGG | + | chr1_1:67672438-67672457 | Msa0038270:intron | 35.0% |
| TAATCTTCAATGCAAGGATC+AGG | - | chr1_1:67672949-67672968 | None:intergenic | 35.0% | |
| GTTGGATAGAAAATGGGATA+TGG | - | chr1_1:67673045-67673064 | None:intergenic | 35.0% | |
| TTCTAATCACTCACCATATG+CGG | - | chr1_1:67673280-67673299 | None:intergenic | 35.0% | |
| TTTGATCAAGTAAGATGGGA+TGG | - | chr1_1:67673331-67673350 | None:intergenic | 35.0% | |
| ! | TTTTGCCATCTAAAAAGGCT+TGG | - | chr1_1:67673426-67673445 | None:intergenic | 35.0% |
| !!! | CCATGAATGTTTTGTTTACG+AGG | - | chr1_1:67673454-67673473 | None:intergenic | 35.0% |
| CCTCGTAAACAAAACATTCA+TGG | + | chr1_1:67673451-67673470 | Msa0038270:intron | 35.0% | |
| ACAAATTAAACTCACGTCCA+TGG | - | chr1_1:67673730-67673749 | None:intergenic | 35.0% | |
| !!! | TTTTTTACCATCCCCTTTCT+CGG | + | chr1_1:67673909-67673928 | Msa0038270:intron | 35.0% |
| !!! | TTTTAAAAGGCACCGAGAAA+GGG | - | chr1_1:67673924-67673943 | None:intergenic | 35.0% |
| !!! | TTTTTAAAAGGCACCGAGAA+AGG | - | chr1_1:67673925-67673944 | None:intergenic | 35.0% |
| !! | TTTCTCAAAGTGCTGGTTAT+TGG | + | chr1_1:67674017-67674036 | Msa0038270:CDS | 35.0% |
| !! | TTCTCAAAGTGCTGGTTATT+GGG | + | chr1_1:67674018-67674037 | Msa0038270:CDS | 35.0% |
| GCAGCTGTCTTATATAATTG+TGG | + | chr1_1:67674148-67674167 | Msa0038270:intron | 35.0% | |
| TACATGCTGAAGTATGCAAT+AGG | - | chr1_1:67674242-67674261 | None:intergenic | 35.0% | |
| ATTTACCAACTGCCTATATG+TGG | + | chr1_1:67674279-67674298 | Msa0038270:CDS | 35.0% | |
| AAGCACCATAAGGTTATTTG+CGG | + | chr1_1:67674607-67674626 | Msa0038270:intron | 35.0% | |
| TATCACCGCAAATAACCTTA+TGG | - | chr1_1:67674615-67674634 | None:intergenic | 35.0% | |
| CTTAGAAGAATTGGTCCTTA+AGG | + | chr1_1:67674697-67674716 | Msa0038270:intron | 35.0% | |
| ! | TTGTTGGTTACTGTTTCTTG+AGG | + | chr1_1:67674766-67674785 | Msa0038270:CDS | 35.0% |
| ATGAGTCAAACTATCAACCA+CGG | + | chr1_1:67674790-67674809 | Msa0038270:CDS | 35.0% | |
| !! | ATATTTTGGATTTGGGAGCA+TGG | + | chr1_1:67674854-67674873 | Msa0038270:CDS | 35.0% |
| GACAAATATGATACCTCAGT+TGG | + | chr1_1:67675106-67675125 | Msa0038270:intron | 35.0% | |
| AAAATACACTATGCCAACTG+AGG | - | chr1_1:67675122-67675141 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCCCACTACATGTT+TGG | + | chr1_1:67675138-67675157 | Msa0038270:intron | 35.0% |
| !! | GTTTTCATGTTCTAGACAAG+GGG | - | chr1_1:67675241-67675260 | None:intergenic | 35.0% |
| TAACATAAATAGGCCCTGTT+TGG | + | chr1_1:67675349-67675368 | Msa0038270:intron | 35.0% | |
| !!! | GCTGTTTTTATAAGCTATCC+TGG | + | chr1_1:67675487-67675506 | Msa0038270:intron | 35.0% |
| !! | CTTATTTTCATAAGCTCTCC+AGG | - | chr1_1:67675508-67675527 | None:intergenic | 35.0% |
| TTAAAAGAGACAGAACAACG+GGG | + | chr1_1:67675782-67675801 | Msa0038270:CDS | 35.0% | |
| AATATGGTCAAAATTAGGGC+TGG | - | chr1_1:67676187-67676206 | None:intergenic | 35.0% | |
| TCTTCCTTTCACTCAAATCT+AGG | + | chr1_1:67676501-67676520 | Msa0038270:intron | 35.0% | |
| AAATCTAGGCATGAATTTGC+AGG | + | chr1_1:67676515-67676534 | Msa0038270:intron | 35.0% | |
| TTGTTGGACACTGCAAATTA+AGG | - | chr1_1:67676754-67676773 | None:intergenic | 35.0% | |
| AAGAATGGGACTATTGTTGT+TGG | - | chr1_1:67676770-67676789 | None:intergenic | 35.0% | |
| ACAACAATAGTCCCATTCTT+TGG | + | chr1_1:67676770-67676789 | Msa0038270:CDS | 35.0% | |
| ! | AAGTTGATTGAGAGTGAAGA+TGG | + | chr1_1:67677025-67677044 | Msa0038270:CDS | 35.0% |
| ! | TTTTTGACCAACTTGCAAAG+TGG | + | chr1_1:67677155-67677174 | Msa0038270:CDS | 35.0% |
| !!! | GGTAGCATAATGTTTTGGTT+TGG | + | chr1_1:67677301-67677320 | Msa0038270:three_prime_UTR | 35.0% |
| CCTATACAAAATGTTTGAGG+GGG | - | chr1_1:67677421-67677440 | None:intergenic | 35.0% | |
| CCTCCTATACAAAATGTTTG+AGG | - | chr1_1:67677424-67677443 | None:intergenic | 35.0% | |
| ! | CCTCAAACATTTTGTATAGG+AGG | + | chr1_1:67677421-67677440 | Msa0038270:three_prime_UTR | 35.0% |
| CTTACATAAAGAACTCTGCT+AGG | + | chr1_1:67677482-67677501 | Msa0038270:three_prime_UTR | 35.0% | |
| !! | GTGATTGTGATGGGTTGTAA+TGG | + | chr1_1:67669569-67669588 | Msa0038270:exon | 40.0% |
| TGACGATTCACCTTCATCTA+AGG | + | chr1_1:67669703-67669722 | Msa0038270:CDS | 40.0% | |
| ATTCACCTTCATCTAAGGAG+AGG | + | chr1_1:67669708-67669727 | Msa0038270:CDS | 40.0% | |
| TTCACCTTCATCTAAGGAGA+GGG | + | chr1_1:67669709-67669728 | Msa0038270:CDS | 40.0% | |
| GTTACTTCTTTGCCACACAA+AGG | + | chr1_1:67669749-67669768 | Msa0038270:CDS | 40.0% | |
| AATGAGCACAAACCTTTGTG+TGG | - | chr1_1:67669764-67669783 | None:intergenic | 40.0% | |
| GTTAGTGTTAGTGTCGTATC+CGG | + | chr1_1:67669823-67669842 | Msa0038270:intron | 40.0% | |
| TGAAACAACGACACAAACAC+CGG | - | chr1_1:67669845-67669864 | None:intergenic | 40.0% | |
| ATTGGACGCCTCAAATTAGT+CGG | - | chr1_1:67670190-67670209 | None:intergenic | 40.0% | |
| ATTTCAGTGGCCTAAGTCTA+TGG | - | chr1_1:67670244-67670263 | None:intergenic | 40.0% | |
| TAGACTTAGGCCACTGAAAT+TGG | + | chr1_1:67670244-67670263 | Msa0038270:intron | 40.0% | |
| CACCATTAAACCAACCCAAA+TGG | + | chr1_1:67670326-67670345 | Msa0038270:intron | 40.0% | |
| !! | ACCCATTTGGGTTGGTTTAA+TGG | - | chr1_1:67670331-67670350 | None:intergenic | 40.0% |
| ATAATTAGGTGCATGGGTGT+TGG | + | chr1_1:67670566-67670585 | Msa0038270:intron | 40.0% | |
| AAATAGTGGCTATAGCGTAG+TGG | + | chr1_1:67670590-67670609 | Msa0038270:intron | 40.0% | |
| !! | CAAAAGCATTCAACCAAGGA+AGG | - | chr1_1:67670767-67670786 | None:intergenic | 40.0% |
| ! | CTTCCTTGGTTGAATGCTTT+TGG | + | chr1_1:67670765-67670784 | Msa0038270:intron | 40.0% |
| !! | AGACCAAAAGCATTCAACCA+AGG | - | chr1_1:67670771-67670790 | None:intergenic | 40.0% |
| ! | TCGAAGGCATGACCTAATAT+TGG | + | chr1_1:67670956-67670975 | Msa0038270:CDS | 40.0% |
| CTGACAGTCTGTCCAATATT+AGG | - | chr1_1:67670971-67670990 | None:intergenic | 40.0% | |
| AATATTGGACAGACTGTCAG+AGG | + | chr1_1:67670971-67670990 | Msa0038270:CDS | 40.0% | |
| ! | GGTTAGCAATCAGTTTTTGC+TGG | - | chr1_1:67671190-67671209 | None:intergenic | 40.0% |
| !! | CTACCGACTCTTCAAAAGAT+TGG | - | chr1_1:67671292-67671311 | None:intergenic | 40.0% |
| ATACTTGTGGTTGGAACTAG+AGG | + | chr1_1:67671371-67671390 | Msa0038270:CDS | 40.0% | |
| CTCCAAGTCAAGACCTTAAT+AGG | + | chr1_1:67671838-67671857 | Msa0038270:intron | 40.0% | |
| ACCCTATTAAGGTCTTGACT+TGG | - | chr1_1:67671843-67671862 | None:intergenic | 40.0% | |
| GCTCAATAAGGAAAAGCCTA+GGG | - | chr1_1:67671938-67671957 | None:intergenic | 40.0% | |
| AGCTCAATAAGGAAAAGCCT+AGG | - | chr1_1:67671939-67671958 | None:intergenic | 40.0% | |
| AATCGCCAATCAGCTCAATA+AGG | - | chr1_1:67671950-67671969 | None:intergenic | 40.0% | |
| AAGACATTTGTAAGGTCAGC+TGG | + | chr1_1:67672171-67672190 | Msa0038270:CDS | 40.0% | |
| GTAAATTTCTATCCTCTGGG+TGG | + | chr1_1:67672195-67672214 | Msa0038270:CDS | 40.0% | |
| GTAAGTCCATATGCAGTTCT+AGG | - | chr1_1:67672615-67672634 | None:intergenic | 40.0% | |
| TCTTCACCCTACACTACAAT+TGG | - | chr1_1:67672738-67672757 | None:intergenic | 40.0% | |
| AACAACAACCAAAGCTTAGG+TGG | + | chr1_1:67672829-67672848 | Msa0038270:intron | 40.0% | |
| AATAAAGGTCTGATTCCGTC+TGG | + | chr1_1:67673126-67673145 | Msa0038270:CDS | 40.0% | |
| TAACCAAAGAAAGCAGCTGA+AGG | + | chr1_1:67673164-67673183 | Msa0038270:CDS | 40.0% | |
| ATAATAGCCTGAGCTGTGAA+GGG | - | chr1_1:67673246-67673265 | None:intergenic | 40.0% | |
| AATAATAGCCTGAGCTGTGA+AGG | - | chr1_1:67673247-67673266 | None:intergenic | 40.0% | |
| TCTAATCACTCACCATATGC+GGG | - | chr1_1:67673279-67673298 | None:intergenic | 40.0% | |
| AAATTATGTGCTAGGAGCCT+TGG | - | chr1_1:67673622-67673641 | None:intergenic | 40.0% | |
| !! | TATTTTTGATTCCGGCTTGC+AGG | + | chr1_1:67673649-67673668 | Msa0038270:intron | 40.0% |
| !! | ATTTTTGATTCCGGCTTGCA+GGG | + | chr1_1:67673650-67673669 | Msa0038270:intron | 40.0% |
| ACATCTTCTTCACAATGCCA+TGG | + | chr1_1:67673710-67673729 | Msa0038270:CDS | 40.0% | |
| !! | TTTAAAAGGCACCGAGAAAG+GGG | - | chr1_1:67673923-67673942 | None:intergenic | 40.0% |
| AACAGGTTTGCCAATAAGGA+AGG | - | chr1_1:67674108-67674127 | None:intergenic | 40.0% | |
| TTGGAACAGGTTTGCCAATA+AGG | - | chr1_1:67674112-67674131 | None:intergenic | 40.0% | |
| TTGTGGATCTACTGATATGG+TGG | + | chr1_1:67674165-67674184 | Msa0038270:CDS | 40.0% | |
| TGTGGATCTACTGATATGGT+GGG | + | chr1_1:67674166-67674185 | Msa0038270:CDS | 40.0% | |
| AAGATGAGGACTCCACATAT+AGG | - | chr1_1:67674294-67674313 | None:intergenic | 40.0% | |
| TTGTCCATACCACTTGGTTT+CGG | - | chr1_1:67674320-67674339 | None:intergenic | 40.0% | |
| ! | GGCTCTTTAGTTGATGTTGT+TGG | + | chr1_1:67674750-67674769 | Msa0038270:CDS | 40.0% |
| TGAGTCAAACTATCAACCAC+GGG | + | chr1_1:67674791-67674810 | Msa0038270:CDS | 40.0% | |
| !!! | GCGGTCCTTTTTTAATCCAT+TGG | - | chr1_1:67674827-67674846 | None:intergenic | 40.0% |
| AATAAGCTGTAGCCAGCTTA+TGG | + | chr1_1:67675522-67675541 | Msa0038270:intron | 40.0% | |
| CTTATGACATGTCCATAAGC+TGG | - | chr1_1:67675537-67675556 | None:intergenic | 40.0% | |
| !!! | GCTTTTTTCAGATGCTGTTG+AGG | + | chr1_1:67675880-67675899 | Msa0038270:intron | 40.0% |
| !!! | CTTTTTTTCAGCTCGAGATC+AGG | - | chr1_1:67676077-67676096 | None:intergenic | 40.0% |
| CTGATCTCGAGCTGAAAAAA+AGG | + | chr1_1:67676075-67676094 | Msa0038270:intron | 40.0% | |
| ! | TGACAACGTTTTCCTTCTTG+AGG | + | chr1_1:67676349-67676368 | Msa0038270:CDS | 40.0% |
| GAGGAAACAACCAATCATGA+GGG | - | chr1_1:67676379-67676398 | None:intergenic | 40.0% | |
| TGAGGAAACAACCAATCATG+AGG | - | chr1_1:67676380-67676399 | None:intergenic | 40.0% | |
| CATGCCTAGATTTGAGTGAA+AGG | - | chr1_1:67676508-67676527 | None:intergenic | 40.0% | |
| ATGAATTTGCAGGTGCATCA+TGG | + | chr1_1:67676525-67676544 | Msa0038270:intron | 40.0% | |
| !! | AGATTTTAATCCTGTAGCCG+TGG | - | chr1_1:67676562-67676581 | None:intergenic | 40.0% |
| ACGGCTACAGGATTAAAATC+TGG | + | chr1_1:67676561-67676580 | Msa0038270:CDS | 40.0% | |
| CGGCTACAGGATTAAAATCT+GGG | + | chr1_1:67676562-67676581 | Msa0038270:CDS | 40.0% | |
| GGCTACAGGATTAAAATCTG+GGG | + | chr1_1:67676563-67676582 | Msa0038270:CDS | 40.0% | |
| TGGATTTGTATCACCGTGTT+AGG | + | chr1_1:67676644-67676663 | Msa0038270:intron | 40.0% | |
| TTGAGCTCGGATATTGGAAT+TGG | - | chr1_1:67676848-67676867 | None:intergenic | 40.0% | |
| TCAACATTGAGCTCGGATAT+TGG | - | chr1_1:67676854-67676873 | None:intergenic | 40.0% | |
| TGCAATGATAAAGGTCTCTG+AGG | - | chr1_1:67676930-67676949 | None:intergenic | 40.0% | |
| AACAACACCACTTTGCAAGT+TGG | - | chr1_1:67677165-67677184 | None:intergenic | 40.0% | |
| AAAATCTACACACCACCACA+AGG | - | chr1_1:67677190-67677209 | None:intergenic | 40.0% | |
| ACAAAATGTTTGAGGGGGAA+GGG | - | chr1_1:67677416-67677435 | None:intergenic | 40.0% | |
| TACAAAATGTTTGAGGGGGA+AGG | - | chr1_1:67677417-67677436 | None:intergenic | 40.0% | |
| ! | CCCCCTCAAACATTTTGTAT+AGG | + | chr1_1:67677418-67677437 | Msa0038270:three_prime_UTR | 40.0% |
| CAATGACTGTTGGGTAGTAG+TGG | + | chr1_1:67669340-67669359 | Msa0038270:five_prime_UTR | 45.0% | |
| TCACCTTCATCTAAGGAGAG+GGG | + | chr1_1:67669710-67669729 | Msa0038270:CDS | 45.0% | |
| GATCTCAGGTTTGATTACCC+TGG | - | chr1_1:67670272-67670291 | None:intergenic | 45.0% | |
| CAAACCTGAGATCTTGAGAG+CGG | + | chr1_1:67670279-67670298 | Msa0038270:intron | 45.0% | |
| TGCATGCTTACATCCTTCCT+TGG | + | chr1_1:67670751-67670770 | Msa0038270:intron | 45.0% | |
| CATTGCATCACAGCTCCTAT+TGG | + | chr1_1:67670861-67670880 | Msa0038270:CDS | 45.0% | |
| GGGTTTCTCTCAGTTCCAAT+AGG | - | chr1_1:67670879-67670898 | None:intergenic | 45.0% | |
| ! | AGGCGATGTACAACCTTTTG+TGG | + | chr1_1:67671391-67671410 | Msa0038270:CDS | 45.0% |
| ! | TTTGTAAGTTGGGGATCCCT+AGG | + | chr1_1:67671919-67671938 | Msa0038270:intron | 45.0% |
| TAAAGCAGCTAAAAGAGGGC+TGG | - | chr1_1:67672331-67672350 | None:intergenic | 45.0% | |
| AACCAAAGCTTAGGTGGAGT+TGG | + | chr1_1:67672835-67672854 | Msa0038270:intron | 45.0% | |
| AACCAACTCCACCTAAGCTT+TGG | - | chr1_1:67672840-67672859 | None:intergenic | 45.0% | |
| GATATTTCAGTCGGTCCAGA+CGG | - | chr1_1:67673144-67673163 | None:intergenic | 45.0% | |
| ! | TGACCTTCAGCTGCTTTCTT+TGG | - | chr1_1:67673170-67673189 | None:intergenic | 45.0% |
| !! | ACAGCACCTGATTTGGAAAC+CGG | + | chr1_1:67673216-67673235 | Msa0038270:CDS | 45.0% |
| TGCCATCTAAAAAGGCTTGG+CGG | - | chr1_1:67673423-67673442 | None:intergenic | 45.0% | |
| TACATCTTGCTGAAGCCCTT+GGG | + | chr1_1:67673677-67673696 | Msa0038270:CDS | 45.0% | |
| ATATGCATTTCCCCACCCTT+TGG | + | chr1_1:67673988-67674007 | Msa0038270:CDS | 45.0% | |
| TTTGAGAAACACGCGCCAAA+GGG | - | chr1_1:67674006-67674025 | None:intergenic | 45.0% | |
| GTGGATCTACTGATATGGTG+GGG | + | chr1_1:67674167-67674186 | Msa0038270:CDS | 45.0% | |
| GCATACTTCAGCATGTATCG+TGG | + | chr1_1:67674245-67674264 | Msa0038270:CDS | 45.0% | |
| CTTGGTTTCGGAACAAGATG+AGG | - | chr1_1:67674308-67674327 | None:intergenic | 45.0% | |
| CATCTTGTTCCGAAACCAAG+TGG | + | chr1_1:67674308-67674327 | Msa0038270:CDS | 45.0% | |
| TGTTCCGAAACCAAGTGGTA+TGG | + | chr1_1:67674313-67674332 | Msa0038270:intron | 45.0% | |
| GAAACCAAGTGGTATGGACA+AGG | + | chr1_1:67674319-67674338 | Msa0038270:intron | 45.0% | |
| ! | GGACCGCCTCCTTTATATTT+TGG | + | chr1_1:67674840-67674859 | Msa0038270:CDS | 45.0% |
| CATAAGTAACGACCAACTCC+TGG | - | chr1_1:67675073-67675092 | None:intergenic | 45.0% | |
| CAAACTTGAATCAGTCCGAC+TGG | - | chr1_1:67676146-67676165 | None:intergenic | 45.0% | |
| TTGAGGAATGCCCTCATGAT+TGG | + | chr1_1:67676366-67676385 | Msa0038270:CDS | 45.0% | |
| GTTTCCTCAATGTTCTGCTG+TGG | + | chr1_1:67676391-67676410 | Msa0038270:CDS | 45.0% | |
| CTAACCACAGCAGAACATTG+AGG | - | chr1_1:67676398-67676417 | None:intergenic | 45.0% | |
| AGAAAAATTGGAGGGGTCAC+AGG | + | chr1_1:67676461-67676480 | Msa0038270:intron | 45.0% | |
| GAAAAATTGGAGGGGTCACA+GGG | + | chr1_1:67676462-67676481 | Msa0038270:intron | 45.0% | |
| AAAAATTGGAGGGGTCACAG+GGG | + | chr1_1:67676463-67676482 | Msa0038270:intron | 45.0% | |
| AATTTGCAGGTGCATCATGG+TGG | + | chr1_1:67676528-67676547 | Msa0038270:intron | 45.0% | |
| TCGGATATTGGAATTGGAGC+AGG | - | chr1_1:67676842-67676861 | None:intergenic | 45.0% | |
| AAAATTCATGCTCCAGCCAG+AGG | + | chr1_1:67676892-67676911 | Msa0038270:CDS | 45.0% | |
| ACTACACATTTACCTCTGGC+TGG | - | chr1_1:67676907-67676926 | None:intergenic | 45.0% | |
| GAGGACTACACATTTACCTC+TGG | - | chr1_1:67676911-67676930 | None:intergenic | 45.0% | |
| TCAGGTGAAATCTCGGACAA+TGG | + | chr1_1:67676994-67677013 | Msa0038270:intron | 45.0% | |
| TCTTCCACATGAGATGGAGT+TGG | - | chr1_1:67677106-67677125 | None:intergenic | 45.0% | |
| ACCACTCCAGTCCTCTTAAT+TGG | + | chr1_1:67677131-67677150 | Msa0038270:CDS | 45.0% | |
| ACCAATTAAGAGGACTGGAG+TGG | - | chr1_1:67677135-67677154 | None:intergenic | 45.0% | |
| !! | AAGTGGTGTTGTTTGCCTTG+TGG | + | chr1_1:67677172-67677191 | Msa0038270:CDS | 45.0% |
| !! | TTCTTAAAATTATATAAAAA+TGG | + | chr1_1:67669163-67669182 | Msa0038270:five_prime_UTR | 5.0% |
| !!! | GAAAAAATTATTTTTTTAAA+AGG | - | chr1_1:67673937-67673956 | None:intergenic | 5.0% |
| CTTCCCCTCTCCTTAGATGA+AGG | - | chr1_1:67669716-67669735 | None:intergenic | 50.0% | |
| CCAATCACACCTTCCACTTG+CGG | + | chr1_1:67670205-67670224 | Msa0038270:intron | 50.0% | |
| CAATCACACCTTCCACTTGC+GGG | + | chr1_1:67670206-67670225 | Msa0038270:intron | 50.0% | |
| AATCACACCTTCCACTTGCG+GGG | + | chr1_1:67670207-67670226 | Msa0038270:intron | 50.0% | |
| ! | TACCCTGGTGCCAATTTCAG+TGG | - | chr1_1:67670257-67670276 | None:intergenic | 50.0% |
| !! | TGGTGTTTGACTTGGGACCT+TGG | - | chr1_1:67670311-67670330 | None:intergenic | 50.0% |
| !! | GCATGGGTGTTGGCAAATAG+TGG | + | chr1_1:67670576-67670595 | Msa0038270:intron | 50.0% |
| AGTGTAGCCCTGTAGCATAG+TGG | + | chr1_1:67670687-67670706 | Msa0038270:intron | 50.0% | |
| CAGAAAAGAGAGGGCTTCGA+AGG | + | chr1_1:67670940-67670959 | Msa0038270:CDS | 50.0% | |
| CAGACTGTCAGAGGATGAGA+AGG | + | chr1_1:67670980-67670999 | Msa0038270:CDS | 50.0% | |
| TTTGAAGAGTCGGTAGCGAG+CGG | + | chr1_1:67671296-67671315 | Msa0038270:CDS | 50.0% | |
| CTCTTCGCAATGGCCACAAA+AGG | - | chr1_1:67671407-67671426 | None:intergenic | 50.0% | |
| TGCCTGAAGTCTCTTCGCAA+TGG | - | chr1_1:67671417-67671436 | None:intergenic | 50.0% | |
| ! | AGGAGTATGGTCATCGCGTT+AGG | + | chr1_1:67672127-67672146 | Msa0038270:intron | 50.0% |
| !! | TGGTGATCCTCGAGTATTGG+CGG | + | chr1_1:67672215-67672234 | Msa0038270:CDS | 50.0% |
| TTACATCCCGCCAATACTCG+AGG | - | chr1_1:67672225-67672244 | None:intergenic | 50.0% | |
| !! | GAGTATTGGCGGGATGTAAG+AGG | + | chr1_1:67672226-67672245 | Msa0038270:intron | 50.0% |
| TGCCAGCCTAGAACTGCATA+TGG | + | chr1_1:67672606-67672625 | Msa0038270:intron | 50.0% | |
| !! | GTCCATATGCAGTTCTAGGC+TGG | - | chr1_1:67672611-67672630 | None:intergenic | 50.0% |
| ! | TTCCAAATCAGGTGCTGTGC+AGG | - | chr1_1:67673214-67673233 | None:intergenic | 50.0% |
| !! | GGAATGCCGGTTTCCAAATC+AGG | - | chr1_1:67673225-67673244 | None:intergenic | 50.0% |
| ATTGCAAACCCTCCCGCATA+TGG | + | chr1_1:67673264-67673283 | Msa0038270:CDS | 50.0% | |
| ATCACTCACCATATGCGGGA+GGG | - | chr1_1:67673275-67673294 | None:intergenic | 50.0% | |
| AATCACTCACCATATGCGGG+AGG | - | chr1_1:67673276-67673295 | None:intergenic | 50.0% | |
| GTACATCTTGCTGAAGCCCT+TGG | + | chr1_1:67673676-67673695 | Msa0038270:CDS | 50.0% | |
| ACATCTTGCTGAAGCCCTTG+GGG | + | chr1_1:67673678-67673697 | Msa0038270:CDS | 50.0% | |
| GATGTGAATAGGCACCCCAA+GGG | - | chr1_1:67673695-67673714 | None:intergenic | 50.0% | |
| AGATGTGAATAGGCACCCCA+AGG | - | chr1_1:67673696-67673715 | None:intergenic | 50.0% | |
| GGGTGGGGAAATGCATATGT+TGG | - | chr1_1:67673986-67674005 | None:intergenic | 50.0% | |
| ! | CTTTGAGAAACACGCGCCAA+AGG | - | chr1_1:67674007-67674026 | None:intergenic | 50.0% |
| GGACTCCACATATAGGCAGT+TGG | - | chr1_1:67674287-67674306 | None:intergenic | 50.0% | |
| GCATCCTTGTCCATACCACT+TGG | - | chr1_1:67674326-67674345 | None:intergenic | 50.0% | |
| GTCAAACTATCAACCACGGG+AGG | + | chr1_1:67674794-67674813 | Msa0038270:CDS | 50.0% | |
| CATTGGAGAAATTCCTCCCG+TGG | - | chr1_1:67674810-67674829 | None:intergenic | 50.0% | |
| CACGGGAGGAATTTCTCCAA+TGG | + | chr1_1:67674808-67674827 | Msa0038270:CDS | 50.0% | |
| ! | ATGGTGGGATTTCACATGCC+AGG | + | chr1_1:67675052-67675071 | Msa0038270:intron | 50.0% |
| GGATTTCACATGCCAGGAGT+TGG | + | chr1_1:67675058-67675077 | Msa0038270:intron | 50.0% | |
| GGGAATTATCGACCGAGGTT+GGG | + | chr1_1:67675802-67675821 | Msa0038270:CDS | 50.0% | |
| GGAATTATCGACCGAGGTTG+GGG | + | chr1_1:67675803-67675822 | Msa0038270:CDS | 50.0% | |
| !! | CATGAGGGCATTCCTCAAGA+AGG | - | chr1_1:67676364-67676383 | None:intergenic | 50.0% |
| ACATGAGATGGAGTTGGCAG+AGG | - | chr1_1:67677100-67677119 | None:intergenic | 50.0% | |
| TCTGCCAACTCCATCTCATG+TGG | + | chr1_1:67677099-67677118 | Msa0038270:CDS | 50.0% | |
| TCCATCTCATGTGGAAGACG+AGG | + | chr1_1:67677108-67677127 | Msa0038270:CDS | 50.0% | |
| TCCTCGTCTTCCACATGAGA+TGG | - | chr1_1:67677112-67677131 | None:intergenic | 50.0% | |
| !! | TGGTGTTGTTTGCCTTGTGG+TGG | + | chr1_1:67677175-67677194 | Msa0038270:CDS | 50.0% |
| GGAGAGGGGAAGCCAATCAT+CGG | + | chr1_1:67669724-67669743 | Msa0038270:CDS | 55.0% | |
| ! | CCGCAAGTGGAAGGTGTGAT+TGG | - | chr1_1:67670208-67670227 | None:intergenic | 55.0% |
| CTTTAAATGGGCCCCGCAAG+TGG | - | chr1_1:67670221-67670240 | None:intergenic | 55.0% | |
| AGGCCACTGAAATTGGCACC+AGG | + | chr1_1:67670251-67670270 | Msa0038270:intron | 55.0% | |
| GGCCACTGAAATTGGCACCA+GGG | + | chr1_1:67670252-67670271 | Msa0038270:intron | 55.0% | |
| ! | TGTGCCGCTCTCAAGATCTC+AGG | - | chr1_1:67670286-67670305 | None:intergenic | 55.0% |
| CTTGAGAGCGGCACAATCCA+AGG | + | chr1_1:67670291-67670310 | Msa0038270:intron | 55.0% | |
| GGCCATTGCGAAGAGACTTC+AGG | + | chr1_1:67671412-67671431 | Msa0038270:CDS | 55.0% | |
| GGGTGGTGATCCTCGAGTAT+TGG | + | chr1_1:67672212-67672231 | Msa0038270:CDS | 55.0% | |
| !! | GGTGATCCTCGAGTATTGGC+GGG | + | chr1_1:67672216-67672235 | Msa0038270:CDS | 55.0% |
| ! | AAATCAGGTGCTGTGCAGGC+TGG | - | chr1_1:67673210-67673229 | None:intergenic | 55.0% |
| AGCCTGCACAGCACCTGATT+TGG | + | chr1_1:67673209-67673228 | Msa0038270:CDS | 55.0% | |
| CTGAGCTGTGAAGGGAATGC+CGG | - | chr1_1:67673238-67673257 | None:intergenic | 55.0% | |
| ! | CGCCGCCAAGCCTTTTTAGA+TGG | + | chr1_1:67673418-67673437 | Msa0038270:intron | 55.0% |
| GATGTACATGCCCTGCAAGC+CGG | - | chr1_1:67673663-67673682 | None:intergenic | 55.0% | |
| !! | AAAGGCACCGAGAAAGGGGA+TGG | - | chr1_1:67673919-67673938 | None:intergenic | 55.0% |
| AGAAACACGCGCCAAAGGGT+GGG | - | chr1_1:67674002-67674021 | None:intergenic | 55.0% | |
| GCGCGTGTTTCTCAAAGTGC+TGG | + | chr1_1:67674010-67674029 | Msa0038270:CDS | 55.0% | |
| ! | CTGATATGGTGGGGAATGCG+AGG | + | chr1_1:67674176-67674195 | Msa0038270:CDS | 55.0% |
| CAACGGGGAATTATCGACCG+AGG | + | chr1_1:67675797-67675816 | Msa0038270:CDS | 55.0% | |
| GGGGAATTATCGACCGAGGT+TGG | + | chr1_1:67675801-67675820 | Msa0038270:CDS | 55.0% | |
| ACCGAGGTTGGGGCAATCTA+GGG | + | chr1_1:67675813-67675832 | Msa0038270:CDS | 55.0% | |
| TCCCTAGATTGCCCCAACCT+CGG | - | chr1_1:67675817-67675836 | None:intergenic | 55.0% | |
| GTTGGCAGAGGTAGCTCATC+AGG | - | chr1_1:67677088-67677107 | None:intergenic | 55.0% | |
| AAATGGGCCCCGCAAGTGGA+AGG | - | chr1_1:67670217-67670236 | None:intergenic | 60.0% | |
| ACTCGAGGATCACCACCCAG+AGG | - | chr1_1:67672210-67672229 | None:intergenic | 60.0% | |
| CGGCATTCCCTTCACAGCTC+AGG | + | chr1_1:67673236-67673255 | Msa0038270:CDS | 60.0% | |
| GAAACACGCGCCAAAGGGTG+GGG | - | chr1_1:67674001-67674020 | None:intergenic | 60.0% | |
| GAGAAACACGCGCCAAAGGG+TGG | - | chr1_1:67674003-67674022 | None:intergenic | 60.0% | |
| GACCGAGGTTGGGGCAATCT+AGG | + | chr1_1:67675812-67675831 | Msa0038270:CDS | 60.0% | |
| ! | GCAGGTGCATCATGGTGGAG+CGG | + | chr1_1:67676533-67676552 | Msa0038270:intron | 60.0% |
| ! | CAGGTGCATCATGGTGGAGC+GGG | + | chr1_1:67676534-67676553 | Msa0038270:intron | 60.0% |
| ! | TCATGGTGGAGCGGGAACCA+CGG | + | chr1_1:67676542-67676561 | Msa0038270:CDS | 60.0% |
| GAGGTAGCTCATCAGGCAGG+TGG | - | chr1_1:67677081-67677100 | None:intergenic | 60.0% | |
| GCAGAGGTAGCTCATCAGGC+AGG | - | chr1_1:67677084-67677103 | None:intergenic | 60.0% | |
| TGGAGGGGTCACAGGGGTTC+TGG | + | chr1_1:67676469-67676488 | Msa0038270:intron | 65.0% | |
| GGAGCGGGAACCACGGCTAC+AGG | + | chr1_1:67676549-67676568 | Msa0038270:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 67669141 | 67677523 | 67669141 | ID=Msa0038270;Name=Msa0038270 |
| chr1_1 | mRNA | 67669141 | 67677523 | 67669141 | ID=Msa0038270-mRNA-1;Parent=Msa0038270;Name=Msa0038270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=437|1|1|1|0.92|0.92|14|319|627 |
| chr1_1 | exon | 67669141 | 67669770 | 67669141 | ID=Msa0038270-mRNA-1:exon:21964;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67670853 | 67671001 | 67670853 | ID=Msa0038270-mRNA-1:exon:21965;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67671191 | 67671433 | 67671191 | ID=Msa0038270-mRNA-1:exon:21966;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67672129 | 67672240 | 67672129 | ID=Msa0038270-mRNA-1:exon:21967;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67673115 | 67673285 | 67673115 | ID=Msa0038270-mRNA-1:exon:21968;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67673671 | 67673734 | 67673671 | ID=Msa0038270-mRNA-1:exon:21969;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67673982 | 67674039 | 67673982 | ID=Msa0038270-mRNA-1:exon:21970;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67674152 | 67674329 | 67674152 | ID=Msa0038270-mRNA-1:exon:21971;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67674745 | 67674875 | 67674745 | ID=Msa0038270-mRNA-1:exon:21972;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67675737 | 67675839 | 67675737 | ID=Msa0038270-mRNA-1:exon:21973;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67676336 | 67676412 | 67676336 | ID=Msa0038270-mRNA-1:exon:21974;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67676537 | 67676584 | 67676537 | ID=Msa0038270-mRNA-1:exon:21975;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67676764 | 67676913 | 67676764 | ID=Msa0038270-mRNA-1:exon:21976;Parent=Msa0038270-mRNA-1 |
| chr1_1 | exon | 67676998 | 67677523 | 67676998 | ID=Msa0038270-mRNA-1:exon:21977;Parent=Msa0038270-mRNA-1 |
| chr1_1 | five_prime_UTR | 67669141 | 67669577 | 67669141 | ID=Msa0038270-mRNA-1:five_prime_utr;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67669578 | 67669770 | 67669578 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67670853 | 67671001 | 67670853 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67671191 | 67671433 | 67671191 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67672129 | 67672240 | 67672129 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67673115 | 67673285 | 67673115 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67673671 | 67673734 | 67673671 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67673982 | 67674039 | 67673982 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67674152 | 67674329 | 67674152 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67674745 | 67674875 | 67674745 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67675737 | 67675839 | 67675737 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67676336 | 67676412 | 67676336 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67676537 | 67676584 | 67676537 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67676764 | 67676913 | 67676764 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | CDS | 67676998 | 67677204 | 67676998 | ID=Msa0038270-mRNA-1:cds;Parent=Msa0038270-mRNA-1 |
| chr1_1 | three_prime_UTR | 67677205 | 67677523 | 67677205 | ID=Msa0038270-mRNA-1:three_prime_utr;Parent=Msa0038270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
