AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0847390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0847390 MtrunA17_Chr5g0447641 89.197 722 30 4 1 682 1 714 0.0 1293
Msa0847390 MtrunA17_Chr5g0447641 98.122 426 8 0 682 1107 784 1209 0.0 874
Msa0847390 MtrunA17_Chr3g0122391 48.444 964 351 17 266 1107 82 1021 0.0 835
Msa0847390 MtrunA17_Chr8g0377481 46.557 973 379 15 250 1107 18 964 0.0 821
Msa0847390 MtrunA17_Chr8g0392301 49.407 506 182 7 270 718 41 529 2.96e-136 439
Msa0847390 MtrunA17_Chr8g0392301 48.081 443 193 9 691 1107 560 991 1.13e-116 386
Msa0847390 MtrunA17_Chr2g0311191 36.996 273 108 7 427 696 21 232 4.79e-36 137
Msa0847390 MtrunA17_Chr3g0136601 35.115 131 77 2 973 1096 805 934 3.89e-15 80.9
Msa0847390 MtrunA17_Chr3g0136601 47.436 78 40 1 714 790 569 646 9.98e-13 72.8
Msa0847390 MtrunA17_Chr1g0197591 33.333 177 88 5 937 1106 892 1045 4.99e-14 77.0
Msa0847390 MtrunA17_Chr5g0405701 30.481 187 79 6 954 1114 1038 1199 1.51e-13 75.9
Msa0847390 MtrunA17_Chr1g0150511 34.109 129 78 2 974 1096 870 997 3.93e-13 74.3
Msa0847390 MtrunA17_Chr1g0150511 47.945 73 38 0 718 790 609 681 6.27e-13 73.6
Msa0847390 MtrunA17_Chr8g0371601 31.944 144 61 4 973 1098 1030 1154 6.18e-12 70.5
Msa0847390 MtrunA17_Chr1g0194731 32.192 146 65 6 972 1107 328 449 1.04e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0847390 AT5G35750.1 50.295 1185 422 21 46 1107 30 1170 0.0 1027
Msa0847390 AT1G27320.1 48.993 943 359 14 283 1117 107 1035 0.0 840
Msa0847390 AT2G01830.1 49.409 508 182 10 269 717 106 597 5.69e-136 440
Msa0847390 AT2G01830.1 47.682 453 197 11 686 1114 620 1056 8.17e-114 380
Msa0847390 AT2G01830.4 49.409 508 182 10 269 717 106 597 5.69e-136 440
Msa0847390 AT2G01830.4 47.682 453 197 11 686 1114 620 1056 8.17e-114 380
Msa0847390 AT2G01830.6 49.409 508 182 10 269 717 106 597 5.69e-136 440
Msa0847390 AT2G01830.6 47.682 453 197 11 686 1114 620 1056 8.17e-114 380
Msa0847390 AT2G01830.3 49.409 508 182 10 269 717 106 597 5.69e-136 440
Msa0847390 AT2G01830.3 47.682 453 197 11 686 1114 620 1056 8.17e-114 380
Msa0847390 AT2G01830.5 49.409 508 182 10 269 717 118 609 5.99e-136 440
Msa0847390 AT2G01830.5 47.682 453 197 11 686 1114 632 1068 8.23e-114 380
Msa0847390 AT2G01830.2 49.409 508 182 10 269 717 129 620 1.13e-135 440
Msa0847390 AT2G01830.2 47.682 453 197 11 686 1114 643 1079 1.36e-113 380
Msa0847390 AT5G10720.1 30.837 227 118 6 601 790 384 608 1.40e-16 85.9
Msa0847390 AT5G10720.1 34.615 130 78 3 973 1096 779 907 2.20e-13 75.5
Msa0847390 AT1G66340.1 28.261 276 161 6 610 850 368 641 9.12e-15 79.7
Msa0847390 AT2G47430.1 34.483 174 72 7 948 1099 956 1109 3.02e-13 75.1
Msa0847390 AT3G04580.2 35.200 125 60 4 973 1096 643 747 7.16e-11 67.0
Msa0847390 AT3G04580.1 35.200 125 60 4 973 1096 643 747 7.16e-11 67.0

Find 248 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCCTTGGACAGCATTC+TGG 0.103589 5_4:+29332426 Msa0847390:CDS
ATCTCAGGTTAGATATATTT+TGG 0.114267 5_4:+29332589 Msa0847390:CDS
ATTAATTACCCGTCCATTTC+TGG 0.122771 5_4:-29335285 None:intergenic
TCTGGGTTTGCTTCAAATTT+TGG 0.123055 5_4:+29328922 Msa0847390:five_prime_UTR
ATTGATACACAAACGAATTT+TGG 0.159316 5_4:+29335110 Msa0847390:CDS
GGGTTTGGTGAGAGAGATTC+TGG 0.181216 5_4:+29328904 Msa0847390:five_prime_UTR
TACTGTTTCTGTTGCTGTTT+TGG 0.189262 5_4:+29329190 Msa0847390:CDS
CCCTTTGGCCTCTGAGTTCC+AGG 0.193078 5_4:+29334529 Msa0847390:CDS
GTTTGACTGCAGAAAATATT+TGG 0.207225 5_4:+29331210 Msa0847390:intron
ATTGTGAATGGAAGAGTTTC+TGG 0.209014 5_4:+29329075 Msa0847390:CDS
GGATGTTGTTTGGTCCTTAT+TGG 0.219358 5_4:+29330629 Msa0847390:CDS
TTGGACTTTAGTAGTTTAAA+AGG 0.222874 5_4:-29331723 None:intergenic
AAAGTTTCAAAAGTTAAATT+TGG 0.231203 5_4:+29334214 Msa0847390:CDS
GTTAATGTGTCCGAAGAATT+TGG 0.236764 5_4:+29329773 Msa0847390:CDS
CTTTAGCTCCTTCTGCTCAT+TGG 0.237386 5_4:-29334956 None:intergenic
AATTTATCTAGTTTAATTAA+AGG 0.239445 5_4:+29330608 Msa0847390:CDS
TGTTTGGTAACATTTCTTAT+TGG 0.260483 5_4:+29335472 Msa0847390:CDS
TTTAGCTCCTTCTGCTCATT+GGG 0.261024 5_4:-29334955 None:intergenic
CACGTAAGCGGTCTAGATTT+TGG 0.265877 5_4:+29332274 Msa0847390:CDS
ACAGCATTCTGGGCATCCTT+GGG 0.276319 5_4:+29332437 Msa0847390:CDS
GACCTCATGGGAGGAGAAAT+TGG 0.278166 5_4:+29334407 Msa0847390:CDS
TCCATGTATTGGAAGGTATC+TGG 0.278596 5_4:+29332102 Msa0847390:intron
TTTGGTGCTGTTGTTGCTAT+AGG 0.279084 5_4:+29329216 Msa0847390:CDS
TTTGTTATTACCTTTCTTCT+TGG 0.283122 5_4:+29332464 Msa0847390:CDS
TAGGAAACAGCTTCATGTTT+TGG 0.295445 5_4:+29329341 Msa0847390:CDS
ACCCGTCCATTTCTGGCATT+TGG 0.297045 5_4:-29335278 None:intergenic
TTGGTTCTGCATGGTTATTT+AGG 0.298048 5_4:+29330834 Msa0847390:CDS
ACCACTCGTGTGAGCAGTTT+GGG 0.298376 5_4:-29333564 None:intergenic
GACAGCATTCTGGGCATCCT+TGG 0.312293 5_4:+29332436 Msa0847390:CDS
TTGTTTGTTAAGATATGAAT+TGG 0.325104 5_4:+29328803 Msa0847390:five_prime_UTR
TGAACAAAGTCATCAAGAAT+TGG 0.326747 5_4:-29329843 None:intergenic
GGGTGGTAAGGCTGCTCTTA+AGG 0.331631 5_4:+29335212 Msa0847390:CDS
GAAGGTGTTCTGCGAAAATA+TGG 0.332772 5_4:+29335168 Msa0847390:CDS
TCTGAAAAGTCCGATGAAAA+AGG 0.335369 5_4:+29333710 Msa0847390:CDS
TTCTTATAGACAAGGATTCT+TGG 0.335599 5_4:+29334824 Msa0847390:CDS
TGGTTGGACAATTAAGAAAA+TGG 0.343061 5_4:+29331335 Msa0847390:CDS
GACTAGGCTAATCCGGTATA+TGG 0.343716 5_4:+29335401 Msa0847390:CDS
ATTTCCTTGGACAGCATTCT+GGG 0.350113 5_4:+29332427 Msa0847390:CDS
TGGACTTTAGTAGTTTAAAA+GGG 0.352298 5_4:-29331722 None:intergenic
TTTGTAAGTGAGCCTGAAAT+TGG 0.376302 5_4:+29334431 Msa0847390:CDS
TACCACTCGTGTGAGCAGTT+TGG 0.378780 5_4:-29333565 None:intergenic
ATGTACTAATGAAGCCTCTT+TGG 0.380444 5_4:+29334998 Msa0847390:CDS
AAGATTCATGTTGTGGTGTT+TGG 0.380532 5_4:+29328959 Msa0847390:five_prime_UTR
CCTCCTTTCATCAATACAAT+TGG 0.381731 5_4:-29329709 None:intergenic
CAGAATGCTGTCCAAGGAAA+TGG 0.384642 5_4:-29332425 None:intergenic
TGAAAGTTCTCCATTCTGAT+AGG 0.384878 5_4:+29331292 Msa0847390:CDS
TTTATGTCAGTTGGAATCCT+TGG 0.387171 5_4:+29330815 Msa0847390:CDS
TGGGGCTAAGGTGGGTGGCC+AGG 0.387928 5_4:-29334936 None:intergenic
TCGGTACCATACATCGTAAT+AGG 0.388024 5_4:-29332229 None:intergenic
GGATCTCCAAATGCCAGAAA+TGG 0.388575 5_4:+29335272 Msa0847390:CDS
TTGCAGGAGCAGAGGTGAAC+AGG 0.393768 5_4:+29336029 Msa0847390:CDS
TTTAATTAAAGGATGTTGTT+TGG 0.394773 5_4:+29330619 Msa0847390:CDS
TCTTATAGACAAGGATTCTT+GGG 0.395654 5_4:+29334825 Msa0847390:CDS
GGAAGAGTTTCTGGTTCAAA+TGG 0.396669 5_4:+29329084 Msa0847390:CDS
TCAAAAGCAGAAGGTAGTTA+AGG 0.396948 5_4:+29330700 Msa0847390:CDS
TGAAGAAGAGCAACTCTATA+CGG 0.397116 5_4:+29335590 Msa0847390:CDS
TACAGAGAATCCCTTGGAAC+TGG 0.398252 5_4:+29335042 Msa0847390:CDS
TCGCGAACATACGGTGGAAC+TGG 0.403424 5_4:+29334353 Msa0847390:CDS
ACATACGGTGGAACTGGAAT+AGG 0.407969 5_4:+29334359 Msa0847390:CDS
GGTACCGATGTTCTTGATAC+TGG 0.414059 5_4:+29332244 Msa0847390:CDS
AGCATACGCCTCCATTTCCT+TGG 0.415014 5_4:+29332414 Msa0847390:CDS
AAAGAATTGGCAGAGATGTT+TGG 0.417574 5_4:+29335456 Msa0847390:CDS
GAAAGCAGAATTCTGCATAA+TGG 0.419360 5_4:+29335713 Msa0847390:CDS
CGAGCAAGGGCATCTGGAAA+GGG 0.420999 5_4:+29331687 Msa0847390:CDS
AATTGCATGTGGGAAAGAAT+TGG 0.426178 5_4:+29335443 Msa0847390:CDS
GGGACAGTATAATGCCAATA+AGG 0.430051 5_4:-29330643 None:intergenic
ATACTGTCCCACAAGTTGTC+TGG 0.431443 5_4:+29330656 Msa0847390:CDS
GAACAAAGTCATCAAGAATT+GGG 0.433982 5_4:-29329842 None:intergenic
TAGAGTTGCTCTTCTTCAAA+TGG 0.434245 5_4:-29335585 None:intergenic
TAAATTGATCTTGCAACATA+CGG 0.441964 5_4:-29330922 None:intergenic
TTGGTGCTGTTGTTGCTATA+GGG 0.442673 5_4:+29329217 Msa0847390:CDS
GACAGCAATGGTTTGCTGAC+AGG 0.443901 5_4:-29332176 None:intergenic
CACAAGTGATGGAACATCAT+AGG 0.445281 5_4:-29332131 None:intergenic
AGCTTGGATTATCATTCCCT+TGG 0.446435 5_4:+29329871 Msa0847390:CDS
CTGCTCATTGGGGCTAAGGT+GGG 0.446711 5_4:-29334944 None:intergenic
GTATCCATCGACATGATGTC+AGG 0.447012 5_4:+29331471 Msa0847390:CDS
CCTTCTGCTCATTGGGGCTA+AGG 0.447909 5_4:-29334948 None:intergenic
GACTTTGTTCACATGAAGCT+TGG 0.449258 5_4:+29329855 Msa0847390:CDS
TGCAGATGTCGCAAAATCTC+AGG 0.453763 5_4:+29332574 Msa0847390:CDS
GAAGAATTTGGAGTTACAAA+AGG 0.453998 5_4:+29329785 Msa0847390:CDS
TAGGAAACAGATGGAAAAGC+TGG 0.456035 5_4:+29334189 Msa0847390:CDS
TCTGATCCTATTACGATGTA+TGG 0.457715 5_4:+29332223 Msa0847390:CDS
GATGAGGGTGTGTGCGATTG+TGG 0.459371 5_4:+29330577 Msa0847390:CDS
TGGAGAATATACAGAGAGTT+CGG 0.464515 5_4:+29331230 Msa0847390:CDS
TTGAGGTGACTAGGCTAATC+CGG 0.464950 5_4:+29335394 Msa0847390:CDS
ACCAGTAGCCTTTGAATGAC+CGG 0.467332 5_4:-29330765 None:intergenic
TCTGCTCATTGGGGCTAAGG+TGG 0.472855 5_4:-29334945 None:intergenic
CTCATTGGGGCTAAGGTGGG+TGG 0.473446 5_4:-29334941 None:intergenic
AGAATGTATTCCAGAAAACT+TGG 0.474067 5_4:+29331383 Msa0847390:CDS
AGGTATGCTGCAAATGTTGA+TGG 0.474230 5_4:+29333508 Msa0847390:intron
TTGTTGCTATAGGGAGCGTT+TGG 0.475413 5_4:+29329226 Msa0847390:CDS
ATCAAAACACTTTGCCAAAG+AGG 0.475890 5_4:-29335012 None:intergenic
TGGTGCATATTCATCTTGAA+TGG 0.477295 5_4:-29331415 None:intergenic
CATATTTACACCTTTCATGC+AGG 0.477916 5_4:+29334316 Msa0847390:CDS
ATCCTTGTCTATAAGAATCA+TGG 0.478300 5_4:-29334818 None:intergenic
TGTTTGTTAAGATATGAATT+GGG 0.480645 5_4:+29328804 Msa0847390:five_prime_UTR
CCATGTATTGGAAGGTATCT+GGG 0.482800 5_4:+29332103 Msa0847390:intron
GCGAGCAAGGGCATCTGGAA+AGG 0.484052 5_4:+29331686 Msa0847390:CDS
GGTTTGGTGAGAGAGATTCT+GGG 0.486465 5_4:+29328905 Msa0847390:five_prime_UTR
CTTGTTCTCAGGATCAGATC+AGG 0.487332 5_4:+29329368 Msa0847390:CDS
CAAGGACAGAATGGCGTCAA+AGG 0.488603 5_4:+29334883 Msa0847390:CDS
TTACCTCGTTCTCCATATAC+CGG 0.488691 5_4:-29335413 None:intergenic
TACATGGAATCACTCATTGC+AGG 0.488992 5_4:+29336013 Msa0847390:CDS
AATCCATCTGATTGTCATCA+AGG 0.489725 5_4:-29333538 None:intergenic
CCCGGTCATTCAAAGGCTAC+TGG 0.491515 5_4:+29330764 Msa0847390:CDS
AATGTTACATATGCTTTCCA+AGG 0.494279 5_4:-29329888 None:intergenic
AATAAATCGAATAGCTAAAG+TGG 0.498068 5_4:+29332505 Msa0847390:CDS
ACGATATCACCTGCAGAGGT+TGG 0.499162 5_4:+29334601 Msa0847390:CDS
CGGATTCAACATTGTATGCC+CGG 0.499645 5_4:+29330746 Msa0847390:CDS
CCTCGACTGTTACTAGTAGT+TGG 0.500006 5_4:-29334256 None:intergenic
ACAGTCGAGGACACTGGTAT+AGG 0.500734 5_4:+29334269 Msa0847390:CDS
TGTCCAATTGTATTGATGAA+AGG 0.501841 5_4:+29329706 Msa0847390:CDS
TTTGAAACAAGAACAAGAGT+TGG 0.502560 5_4:-29328735 None:intergenic
CAGCATTCTGGGCATCCTTG+GGG 0.503392 5_4:+29332438 Msa0847390:CDS
AACAAAAGCCAGACAACTTG+TGG 0.503467 5_4:-29330664 None:intergenic
CGATATCACCTGCAGAGGTT+GGG 0.504786 5_4:+29334602 Msa0847390:CDS
ACATCCTTCCGCAGTTGACC+AGG 0.506511 5_4:+29331006 Msa0847390:CDS
TTCAACTGCAATATATTACA+TGG 0.506745 5_4:+29335997 Msa0847390:CDS
TTACTAATGCTCTCAAACCC+TGG 0.510047 5_4:-29334547 None:intergenic
TTGGAATCCTTGGTTCTGCA+TGG 0.513364 5_4:+29330825 Msa0847390:CDS
AGTCGTATTTGCTCAAGAAA+CGG 0.515422 5_4:+29331437 Msa0847390:CDS
CAAAATGCATCCTATCAGAA+TGG 0.515566 5_4:-29331302 None:intergenic
AGTTCCACATCGCGAACATA+CGG 0.515602 5_4:+29334344 Msa0847390:CDS
TACCTGTGTGGAGGGTGGTA+AGG 0.516659 5_4:+29335200 Msa0847390:CDS
GTGGCAGAAGAATAACCCTT+TGG 0.524349 5_4:+29334514 Msa0847390:CDS
GAGCAAAACGTTAACCAAAT+CGG 0.525792 5_4:-29329928 None:intergenic
CCTGGAACTCAGAGGCCAAA+GGG 0.527638 5_4:-29334529 None:intergenic
CAGACATGCCCAACCTCTGC+AGG 0.530444 5_4:-29334610 None:intergenic
GGACTTTAGTAGTTTAAAAG+GGG 0.531138 5_4:-29331721 None:intergenic
GGTGCATATTCATCTTGAAT+GGG 0.531343 5_4:-29331414 None:intergenic
CTGATCTGATCCTGAGAACA+AGG 0.533568 5_4:-29329367 None:intergenic
AAATTGATCTTGCAACATAC+GGG 0.535060 5_4:-29330921 None:intergenic
AGGATGTCTGTGATTGTGAA+TGG 0.536700 5_4:+29329063 Msa0847390:exon
GAGTGGTAAAGATCTTATAT+CGG 0.537674 5_4:+29333580 Msa0847390:CDS
GGCTCTCTCATCACACATAG+TGG 0.539504 5_4:-29330900 None:intergenic
CGCTACTACAGAGAATCCCT+TGG 0.539625 5_4:+29335036 Msa0847390:CDS
TATTCATCTTGAATGGGCGC+TGG 0.540279 5_4:-29331408 None:intergenic
TCCAAATGCCAGAAATGGAC+GGG 0.542668 5_4:+29335277 Msa0847390:CDS
CCTTTGGCCTCTGAGTTCCA+GGG 0.543146 5_4:+29334530 Msa0847390:CDS
ATGCAGAATTCTGCTTTCGA+AGG 0.543603 5_4:-29335708 None:intergenic
ATCAAGAAACAAGGACAGAA+TGG 0.546253 5_4:+29334874 Msa0847390:CDS
CTTCAAATGTTGTTAAGTAG+TGG 0.546319 5_4:+29329732 Msa0847390:CDS
GACAATAATGTCTTTGAGAG+TGG 0.548662 5_4:-29328778 None:intergenic
TAAATGTCTAGTTGACCTCA+TGG 0.554358 5_4:+29334394 Msa0847390:CDS
AGAAGCTTGTCCACAAGTGA+TGG 0.554573 5_4:-29332142 None:intergenic
TGCATAATGGATCTCAGCTA+TGG 0.555591 5_4:+29335726 Msa0847390:CDS
TCAGCTGTCATAGCTAGTAT+TGG 0.556557 5_4:-29335501 None:intergenic
GGCCATGATTCTTATAGACA+AGG 0.556608 5_4:+29334816 Msa0847390:CDS
TTTCAGTATGTCGACGCAGT+TGG 0.556794 5_4:+29334795 Msa0847390:intron
CCAATTGTATTGATGAAAGG+AGG 0.556888 5_4:+29329709 Msa0847390:CDS
AAATATATATCCAAGAAGAA+AGG 0.557028 5_4:-29332474 None:intergenic
GAAATGAACTTTCTGAAAAG+CGG 0.557655 5_4:-29335977 None:intergenic
CTATGATGTTCCATCACTTG+TGG 0.557856 5_4:+29332132 Msa0847390:CDS
AAACAAGCATCAAAATTATG+TGG 0.560851 5_4:-29335246 None:intergenic
AAAAGTAGAAACAGAATCTG+TGG 0.562573 5_4:+29334484 Msa0847390:CDS
TTGGAAAGCATATGTAACAT+TGG 0.562808 5_4:+29329890 Msa0847390:CDS
CCAGTAGCCTTTGAATGACC+GGG 0.563893 5_4:-29330764 None:intergenic
GTCATACACATTGACAGCAA+TGG 0.567089 5_4:-29332188 None:intergenic
TAAGCAACACCACTAGTAAG+TGG 0.568808 5_4:-29331264 None:intergenic
AAAGCAAGCAGATTGAAGAC+TGG 0.571842 5_4:-29334645 None:intergenic
ACAAAAGCCAGACAACTTGT+GGG 0.571903 5_4:-29330663 None:intergenic
CCCTGGAACTCAGAGGCCAA+AGG 0.573447 5_4:-29334530 None:intergenic
ACACAAGAATAGCGAGAGCA+TGG 0.573638 5_4:-29330964 None:intergenic
CAGAAGGAGCTAAAGTCAGT+TGG 0.574474 5_4:+29334964 Msa0847390:CDS
AAATATGCGGCTTTGAGCAT+CGG 0.576359 5_4:-29334300 None:intergenic
TTGTATGCCCGGTCATTCAA+AGG 0.577652 5_4:+29330757 Msa0847390:CDS
ATTCATATCTTAACAAACAA+AGG 0.578543 5_4:-29328800 None:intergenic
TATCAAGCTAAGATCGAGGC+AGG 0.579435 5_4:+29333620 Msa0847390:CDS
GAACTATCAGCCTGCATGAA+AGG 0.579814 5_4:-29334326 None:intergenic
GAAAACATGAGATGCACTGC+AGG 0.579994 5_4:+29332308 Msa0847390:CDS
AGAACATGCAATACATTGAG+TGG 0.580850 5_4:+29334158 Msa0847390:CDS
CCTTAGCCCCAATGAGCAGA+AGG 0.581226 5_4:+29334948 Msa0847390:CDS
CTCCAAATGCCAGAAATGGA+CGG 0.581688 5_4:+29335276 Msa0847390:CDS
TGGTTTGCTGACAGGCAAGC+TGG 0.582491 5_4:-29332168 None:intergenic
TTAGCTCCTTCTGCTCATTG+GGG 0.582725 5_4:-29334954 None:intergenic
GTCATTCAAAGGCTACTGGT+TGG 0.583595 5_4:+29330768 Msa0847390:CDS
ATCACTCATTGCAGGAGCAG+AGG 0.585251 5_4:+29336021 Msa0847390:CDS
ATTCAAAGGCTACTGGTTGG+CGG 0.585519 5_4:+29330771 Msa0847390:CDS
GTGGTGTGAAAGAAAGAGAT+AGG 0.587227 5_4:-29328628 None:intergenic
ACATTGAGTGGATTTCCTGT+AGG 0.587511 5_4:+29334170 Msa0847390:CDS
TTTCTGATACTTGCAACTCA+AGG 0.587800 5_4:+29334672 Msa0847390:CDS
AAGGAAGAATCAAAAGCAGA+AGG 0.589976 5_4:+29330691 Msa0847390:CDS
CTACTACAGCTGATGCAACT+CGG 0.595778 5_4:+29335685 Msa0847390:intron
GATTTCCTGTAGGAAACAGA+TGG 0.596201 5_4:+29334180 Msa0847390:CDS
GATGCCCAGAATGCTGTCCA+AGG 0.597141 5_4:-29332431 None:intergenic
ATCCACCTGCTCCACAAAAG+CGG 0.599663 5_4:+29330726 Msa0847390:CDS
TGACCTTGATGACAATCAGA+TGG 0.600124 5_4:+29333535 Msa0847390:CDS
GTTTCTTGAGCAAATACGAC+TGG 0.600912 5_4:-29331435 None:intergenic
GCAGTAGTTACCTGTGTGGA+GGG 0.602358 5_4:+29335192 Msa0847390:CDS
GAATAGCGAGAGCATGGACA+TGG 0.603489 5_4:-29330958 None:intergenic
CAGAATCTGTGGATGAGAAG+TGG 0.603636 5_4:+29334495 Msa0847390:CDS
AGCAAGGGCATCTGGAAAGG+GGG 0.603947 5_4:+29331689 Msa0847390:CDS
ATGTTACATATGCTTTCCAA+GGG 0.605409 5_4:-29329887 None:intergenic
AGACAAGGATTCTTGGGACA+AGG 0.605502 5_4:+29334831 Msa0847390:CDS
GAGCAAGGGCATCTGGAAAG+GGG 0.605827 5_4:+29331688 Msa0847390:CDS
CTTCCCTGACATCATGTCGA+TGG 0.606250 5_4:-29331475 None:intergenic
AAATGTCTAGTTGACCTCAT+GGG 0.606651 5_4:+29334395 Msa0847390:CDS
AAACTTGAATCAGGACATGT+CGG 0.606659 5_4:+29334133 Msa0847390:intron
TTTGCAATCACAGGTGATGA+GGG 0.607181 5_4:+29330562 Msa0847390:intron
ACAGAGAATCCCTTGGAACT+GGG 0.608161 5_4:+29335043 Msa0847390:CDS
AGCATTCTGGGCATCCTTGG+GGG 0.608710 5_4:+29332439 Msa0847390:CDS
GACATTGTAACGTTGTAACA+AGG 0.610027 5_4:-29329316 None:intergenic
GCCCAAACTGCTCACACGAG+TGG 0.611642 5_4:+29333563 Msa0847390:CDS
TCCACCGTATGTTCGCGATG+TGG 0.613281 5_4:-29334348 None:intergenic
GTGAACAGAAAAGTTGCAGA+AGG 0.613404 5_4:+29335150 Msa0847390:CDS
AGGAAACAGATGGAAAAGCT+GGG 0.614483 5_4:+29334190 Msa0847390:CDS
TCTTATATCGGTTATAAGCG+AGG 0.615675 5_4:+29333592 Msa0847390:CDS
GTTACCTGGTCAACTGCGGA+AGG 0.619421 5_4:-29331010 None:intergenic
CAAGCATCAAAATTATGTGG+TGG 0.622634 5_4:-29335243 None:intergenic
CTAGTAACAGTCGAGGACAC+TGG 0.623583 5_4:+29334263 Msa0847390:CDS
TCCACATCGCGAACATACGG+TGG 0.623794 5_4:+29334347 Msa0847390:CDS
TATCCATCGACATGATGTCA+GGG 0.623915 5_4:+29331472 Msa0847390:CDS
TGAATGTTCAGCTAAAGTGG+TGG 0.630190 5_4:+29328995 Msa0847390:five_prime_UTR
ATGCGGCTTTGAGCATCGGT+AGG 0.631149 5_4:-29334296 None:intergenic
CTTGTGTCTACATTTCACCA+TGG 0.631262 5_4:+29330980 Msa0847390:CDS
TAAATAACCATGCAGAACCA+AGG 0.637583 5_4:-29330832 None:intergenic
ATTCTAGTACAACATGTAGG+AGG 0.638178 5_4:+29329166 Msa0847390:CDS
GGCAGGCAAACTAGAACTTG+AGG 0.639131 5_4:+29333637 Msa0847390:CDS
AGCCTTACCACCCTCCACAC+AGG 0.641150 5_4:-29335202 None:intergenic
AGAGCAACTCTATACGGCAG+TGG 0.641157 5_4:+29335596 Msa0847390:CDS
TGGTTGTTCAGAGTTGAGTG+AGG 0.643501 5_4:+29328566 Msa0847390:five_prime_UTR
TTCTTCGGACACATTAACTG+TGG 0.646243 5_4:-29329768 None:intergenic
AATGCTGTCCAAGGAAATGG+AGG 0.646257 5_4:-29332422 None:intergenic
TACAACGTTACAATGTCAGT+AGG 0.648876 5_4:+29329322 Msa0847390:CDS
GATATCGTGTAACCTCAGCC+CGG 0.651457 5_4:-29334586 None:intergenic
CATCGACATGATGTCAGGGA+AGG 0.652451 5_4:+29331476 Msa0847390:CDS
CTAATTCTAGTACAACATGT+AGG 0.654312 5_4:+29329163 Msa0847390:CDS
GCATGAAAGGTGTAAATATG+CGG 0.658298 5_4:-29334313 None:intergenic
TGTCTAGTTGACCTCATGGG+AGG 0.658386 5_4:+29334398 Msa0847390:CDS
AGCAGTAGTTACCTGTGTGG+AGG 0.662067 5_4:+29335191 Msa0847390:CDS
TTTGAGAGACCACTTACTAG+TGG 0.664415 5_4:+29331255 Msa0847390:CDS
GAAAATGGAAACTGAGAACG+AGG 0.669396 5_4:+29331350 Msa0847390:CDS
ACTTCATCTAGAATTGCATG+TGG 0.670385 5_4:-29333674 None:intergenic
GTAGTTACCTGTGTGGAGGG+TGG 0.673674 5_4:+29335195 Msa0847390:CDS
AAGCAATAATCACTTGAACA+AGG 0.678491 5_4:-29328698 None:intergenic
CTGCGGAAGGATGTTTACCA+TGG 0.679151 5_4:-29330997 None:intergenic
ACTGGCTTACTACACGTAAG+CGG 0.680944 5_4:+29332262 Msa0847390:CDS
TAAGCCAGTATCAAGAACAT+CGG 0.681711 5_4:-29332248 None:intergenic
ATCCAATTTCTCCTCCCATG+AGG 0.687075 5_4:-29334409 None:intergenic
TTATACGCAATCAAGAAACA+AGG 0.692490 5_4:+29334865 Msa0847390:CDS
TTACACGATATCACCTGCAG+AGG 0.694581 5_4:+29334597 Msa0847390:CDS
TCTCAAACCCTGGAACTCAG+AGG 0.698392 5_4:-29334537 None:intergenic
TCTCTATCAAGCTAAGATCG+AGG 0.707670 5_4:+29333616 Msa0847390:CDS
ATATGTTACCTGGTCAACTG+CGG 0.712765 5_4:-29331014 None:intergenic
TGGAGCAGTAGTTACCTGTG+TGG 0.714398 5_4:+29335188 Msa0847390:CDS
CCAACTACTAGTAACAGTCG+AGG 0.735761 5_4:+29334256 Msa0847390:CDS
AATCCGGTATATGGAGAACG+AGG 0.748717 5_4:+29335410 Msa0847390:CDS
GAAAATCTCAGTGAAATGTG+TGG 0.754478 5_4:-29328647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTCACTTTTTTATTT+TGG + chr5_4:29330538-29330557 Msa0847390:intron 10.0%
!!! AATTTATCTAGTTTAATTAA+AGG + chr5_4:29330608-29330627 Msa0847390:CDS 10.0%
!!! TTTTAATATTACACATTTTA+AGG + chr5_4:29331138-29331157 Msa0847390:intron 10.0%
!! ATTAATTTCAATTACATAAA+AGG - chr5_4:29332752-29332771 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr5_4:29333279-29333298 Msa0847390:intron 10.0%
!!! ATAAGTAATTTTTTTTTTGT+AGG + chr5_4:29333340-29333359 Msa0847390:intron 10.0%
!!! TAAGTAATTTTTTTTTTGTA+GGG + chr5_4:29333341-29333360 Msa0847390:intron 10.0%
!!! TTTTTACAATGTATTTATGT+TGG + chr5_4:29329564-29329583 Msa0847390:intron 15.0%
!!! TTTTACAATGTATTTATGTT+GGG + chr5_4:29329565-29329584 Msa0847390:intron 15.0%
!! ATGTGATATTTCAATTATTT+GGG - chr5_4:29332364-29332383 None:intergenic 15.0%
!! TATGTGATATTTCAATTATT+TGG - chr5_4:29332365-29332384 None:intergenic 15.0%
!!! ATAAGTATATTTCCATTTTT+TGG + chr5_4:29332382-29332401 Msa0847390:intron 15.0%
!! AATGGTATTAAAATTAAGTA+AGG - chr5_4:29332956-29332975 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr5_4:29333028-29333047 None:intergenic 15.0%
!!! TTTTTCAACAATTTTTTTAC+AGG + chr5_4:29333059-29333078 Msa0847390:intron 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr5_4:29333148-29333167 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + chr5_4:29333307-29333326 Msa0847390:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + chr5_4:29333308-29333327 Msa0847390:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr5_4:29333370-29333389 Msa0847390:intron 15.0%
!! AAAGTTTCAAAAGTTAAATT+TGG + chr5_4:29334214-29334233 Msa0847390:CDS 15.0%
!!! TATCAATAAATTTTCAAGTT+GGG - chr5_4:29335097-29335116 None:intergenic 15.0%
!! ATTCATATCTTAACAAACAA+AGG - chr5_4:29328803-29328822 None:intergenic 20.0%
!!! TTGTTTGTTAAGATATGAAT+TGG + chr5_4:29328803-29328822 Msa0847390:five_prime_UTR 20.0%
!!! TGTTTGTTAAGATATGAATT+GGG + chr5_4:29328804-29328823 Msa0847390:five_prime_UTR 20.0%
!!! AAAAGTTGGTAATTTTTTCA+AGG + chr5_4:29329043-29329062 Msa0847390:five_prime_UTR 20.0%
!!! ATTAAATCAAAACTTGTTAG+TGG + chr5_4:29329493-29329512 Msa0847390:intron 20.0%
!!! ATTTAATTACTTGCTAAAAG+TGG + chr5_4:29329598-29329617 Msa0847390:intron 20.0%
!!! TTTAATTACTTGCTAAAAGT+GGG + chr5_4:29329599-29329618 Msa0847390:intron 20.0%
!!! TATTTTTGAAAGGAAAAAAG+TGG + chr5_4:29329629-29329648 Msa0847390:intron 20.0%
!!! ATTTAAACTACAGAACTTTT+AGG - chr5_4:29329991-29330010 None:intergenic 20.0%
!! TAATCAAGTTATTAGACTAT+AGG - chr5_4:29330437-29330456 None:intergenic 20.0%
!! TTTAATTAAAGGATGTTGTT+TGG + chr5_4:29330619-29330638 Msa0847390:CDS 20.0%
!!! ATGTCATTATTTTCTCTTAT+TGG + chr5_4:29331040-29331059 Msa0847390:intron 20.0%
!!! TGTCATTATTTTCTCTTATT+GGG + chr5_4:29331041-29331060 Msa0847390:intron 20.0%
!!! TTCATATTTAGAGTTATTCA+TGG + chr5_4:29331092-29331111 Msa0847390:intron 20.0%
!! AATTGAAGTGATAAAGTATA+AGG + chr5_4:29331166-29331185 Msa0847390:intron 20.0%
!!! ATTTTTCTGCATTGTTATAT+AGG + chr5_4:29331644-29331663 Msa0847390:intron 20.0%
!! TAATCTCATTAAGTTATCAT+TGG - chr5_4:29331849-29331868 None:intergenic 20.0%
!! AAATATATATCCAAGAAGAA+AGG - chr5_4:29332477-29332496 None:intergenic 20.0%
!!! TTGTTGTTGTTATAATAGAT+AGG + chr5_4:29332881-29332900 Msa0847390:intron 20.0%
!!! TGTTGTTGTTATAATAGATA+GGG + chr5_4:29332882-29332901 Msa0847390:intron 20.0%
!!! TTTTTTGTAGGGATTAAAAA+TGG - chr5_4:29333352-29333371 None:intergenic 20.0%
!!! ATTAGGGTTAATTATGTTTT+TGG - chr5_4:29333428-29333447 None:intergenic 20.0%
!!! AAGTAAAGTATCTAAAGATA+GGG - chr5_4:29333749-29333768 None:intergenic 20.0%
!!! AAAGTAAAGTATCTAAAGAT+AGG - chr5_4:29333750-29333769 None:intergenic 20.0%
!! TAATAGATAGAAGAAAAATC+CGG + chr5_4:29334567-29334586 Msa0847390:CDS 20.0%
!! TATTATAATAACCTAATGTC+CGG - chr5_4:29334746-29334765 None:intergenic 20.0%
!!! GTATCAATAAATTTTCAAGT+TGG - chr5_4:29335098-29335117 None:intergenic 20.0%
!! TAAATGAAAAAATTGCATGT+GGG + chr5_4:29335433-29335452 Msa0847390:CDS 20.0%
!! CTTTGTAGTTTTTCTATAAC+AGG - chr5_4:29328601-29328620 None:intergenic 25.0%
!!! GTACTTTTGTTGTCTTTTAT+GGG - chr5_4:29328672-29328691 None:intergenic 25.0%
!!! AGTACTTTTGTTGTCTTTTA+TGG - chr5_4:29328673-29328692 None:intergenic 25.0%
! CAAATCAAAAACTAACTTTC+AGG + chr5_4:29328754-29328773 Msa0847390:five_prime_UTR 25.0%
!! TCATCAAAATTTTACGCTTT+TGG + chr5_4:29328829-29328848 Msa0847390:five_prime_UTR 25.0%
!! TTTTCTTCACTGAAAATTCA+AGG - chr5_4:29329027-29329046 None:intergenic 25.0%
!! AATTTTCAGTGAAGAAAAGT+TGG + chr5_4:29329029-29329048 Msa0847390:five_prime_UTR 25.0%
!!! GTACTGTTTTTCAATTGTAT+TGG + chr5_4:29329416-29329435 Msa0847390:intron 25.0%
!!! GGGAAAACTATATTTTTGAA+AGG + chr5_4:29329619-29329638 Msa0847390:intron 25.0%
!! TTTTGTAACTCCAAATTCTT+CGG - chr5_4:29329786-29329805 None:intergenic 25.0%
!!! TTTAAATTGTTGATTCTGCT+TGG + chr5_4:29330004-29330023 Msa0847390:intron 25.0%
! CAACATTCTTAAAAGAAATG+AGG - chr5_4:29330087-29330106 None:intergenic 25.0%
!!! ATTCTGGTTTACAAATTCAA+AGG - chr5_4:29330311-29330330 None:intergenic 25.0%
! TGAAAAGAATGTTATGATTC+TGG - chr5_4:29330327-29330346 None:intergenic 25.0%
!!! ATTCTAGAATAAAGTACGAT+TGG - chr5_4:29330405-29330424 None:intergenic 25.0%
! AACTTGATTATGTAAAGTAG+TGG + chr5_4:29330447-29330466 Msa0847390:intron 25.0%
!!! CTAGTTATTTTTATGTCAGT+TGG + chr5_4:29330806-29330825 Msa0847390:CDS 25.0%
! TAAATTGATCTTGCAACATA+CGG - chr5_4:29330925-29330944 None:intergenic 25.0%
!! GTCATTATTTTCTCTTATTG+GGG + chr5_4:29331042-29331061 Msa0847390:intron 25.0%
! TGGACTTTAGTAGTTTAAAA+GGG - chr5_4:29331725-29331744 None:intergenic 25.0%
! TTGGACTTTAGTAGTTTAAA+AGG - chr5_4:29331726-29331745 None:intergenic 25.0%
! ATGTAACTAATTAAGTGATG+TGG - chr5_4:29331928-29331947 None:intergenic 25.0%
!!! TTTGTTATTACCTTTCTTCT+TGG + chr5_4:29332464-29332483 Msa0847390:CDS 25.0%
! AATAAATCGAATAGCTAAAG+TGG + chr5_4:29332505-29332524 Msa0847390:CDS 25.0%
!! ATCTCAGGTTAGATATATTT+TGG + chr5_4:29332589-29332608 Msa0847390:CDS 25.0%
!! TCTCAGGTTAGATATATTTT+GGG + chr5_4:29332590-29332609 Msa0847390:CDS 25.0%
!! GATAGGGTTAATTATGTTTT+TGG + chr5_4:29332898-29332917 Msa0847390:intron 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr5_4:29333017-29333036 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr5_4:29333083-29333102 Msa0847390:intron 25.0%
!!! TTTTGCGATATTTTTTTCGA+AGG - chr5_4:29333110-29333129 None:intergenic 25.0%
!! CTGTTTTCAAATAATTTTCC+AGG + chr5_4:29333488-29333507 Msa0847390:intron 25.0%
!! TTATGTTCTCTATACCTTTT+TGG + chr5_4:29333815-29333834 Msa0847390:intron 25.0%
!! CAAGATTGGTAATTATTTGT+CGG - chr5_4:29333910-29333929 None:intergenic 25.0%
! CAAATAATTACCAATCTTGT+TGG + chr5_4:29333911-29333930 Msa0847390:intron 25.0%
! TTTCAGTTCATTCACAATAA+AGG + chr5_4:29334029-29334048 Msa0847390:intron 25.0%
! AATAGATAGAAGAAAAATCC+GGG + chr5_4:29334568-29334587 Msa0847390:CDS 25.0%
!!! AGGTAATGTGTTAGTTTTTT+TGG + chr5_4:29334692-29334711 Msa0847390:intron 25.0%
!! ATTGATACACAAACGAATTT+TGG + chr5_4:29335110-29335129 Msa0847390:CDS 25.0%
! AAACAAGCATCAAAATTATG+TGG - chr5_4:29335249-29335268 None:intergenic 25.0%
!!! TAATTTTGATGCTTGTTTCA+TGG + chr5_4:29335251-29335270 Msa0847390:CDS 25.0%
! GTAAATGAAAAAATTGCATG+TGG + chr5_4:29335432-29335451 Msa0847390:CDS 25.0%
!! TGTTTGGTAACATTTCTTAT+TGG + chr5_4:29335472-29335491 Msa0847390:CDS 25.0%
! AATGAAGAATGCAAAAAATG+TGG + chr5_4:29335540-29335559 Msa0847390:CDS 25.0%
! ATGAAGAATGCAAAAAATGT+GGG + chr5_4:29335541-29335560 Msa0847390:CDS 25.0%
! ACTTGTAATATGAAAATCCA+AGG - chr5_4:29335786-29335805 None:intergenic 25.0%
! TTCAACTGCAATATATTACA+TGG + chr5_4:29335997-29336016 Msa0847390:CDS 25.0%
AAGCAATAATCACTTGAACA+AGG - chr5_4:29328701-29328720 None:intergenic 30.0%
! TTTGAAACAAGAACAAGAGT+TGG - chr5_4:29328738-29328757 None:intergenic 30.0%
!! ACTTTATGAGTTTTGTGAAG+TGG + chr5_4:29328883-29328902 Msa0847390:five_prime_UTR 30.0%
!! CTTTATGAGTTTTGTGAAGT+GGG + chr5_4:29328884-29328903 Msa0847390:five_prime_UTR 30.0%
!! TCTTTTGAAGATTCATGTTG+TGG + chr5_4:29328952-29328971 Msa0847390:five_prime_UTR 30.0%
! TTTTGAATGTTCAGCTAAAG+TGG + chr5_4:29328992-29329011 Msa0847390:five_prime_UTR 30.0%
! CTTCACCAAAAATCAAGTTT+TGG + chr5_4:29329115-29329134 Msa0847390:CDS 30.0%
! CCTTTCCAAAACTTGATTTT+TGG - chr5_4:29329123-29329142 None:intergenic 30.0%
!!! CCAAAAATCAAGTTTTGGAA+AGG + chr5_4:29329120-29329139 Msa0847390:CDS 30.0%
CTAATTCTAGTACAACATGT+AGG + chr5_4:29329163-29329182 Msa0847390:CDS 30.0%
!!! CATAAGATGCACTTTGTTTT+TGG + chr5_4:29329394-29329413 Msa0847390:intron 30.0%
! TGTCCAATTGTATTGATGAA+AGG + chr5_4:29329706-29329725 Msa0847390:CDS 30.0%
CTTCAAATGTTGTTAAGTAG+TGG + chr5_4:29329732-29329751 Msa0847390:CDS 30.0%
! GAAGAATTTGGAGTTACAAA+AGG + chr5_4:29329785-29329804 Msa0847390:CDS 30.0%
GAACAAAGTCATCAAGAATT+GGG - chr5_4:29329845-29329864 None:intergenic 30.0%
TGAACAAAGTCATCAAGAAT+TGG - chr5_4:29329846-29329865 None:intergenic 30.0%
ATGTTACATATGCTTTCCAA+GGG - chr5_4:29329890-29329909 None:intergenic 30.0%
AATGTTACATATGCTTTCCA+AGG - chr5_4:29329891-29329910 None:intergenic 30.0%
! TTGGAAAGCATATGTAACAT+TGG + chr5_4:29329890-29329909 Msa0847390:CDS 30.0%
GGTCAATCACTATGTAAATT+AGG - chr5_4:29330047-29330066 None:intergenic 30.0%
AATCTTCAAACTTCTAGCAA+GGG - chr5_4:29330288-29330307 None:intergenic 30.0%
!!! TATTTTGGTTTTGCAATCAC+AGG + chr5_4:29330553-29330572 Msa0847390:intron 30.0%
AAATTGATCTTGCAACATAC+GGG - chr5_4:29330924-29330943 None:intergenic 30.0%
ATGACATTGAATATGTTACC+TGG - chr5_4:29331027-29331046 None:intergenic 30.0%
GTTTGACTGCAGAAAATATT+TGG + chr5_4:29331210-29331229 Msa0847390:intron 30.0%
TGGTTGGACAATTAAGAAAA+TGG + chr5_4:29331335-29331354 Msa0847390:CDS 30.0%
AGAATGTATTCCAGAAAACT+TGG + chr5_4:29331383-29331402 Msa0847390:CDS 30.0%
TGACGACTTTCAATAACATA+AGG - chr5_4:29331528-29331547 None:intergenic 30.0%
AGATTCAGATGAAATAAGCT+TGG + chr5_4:29331561-29331580 Msa0847390:intron 30.0%
CATTAAATTGCTCACATATC+AGG + chr5_4:29331606-29331625 Msa0847390:intron 30.0%
TTTCTGCATTGTTATATAGG+AGG + chr5_4:29331647-29331666 Msa0847390:intron 30.0%
GGACTTTAGTAGTTTAAAAG+GGG - chr5_4:29331724-29331743 None:intergenic 30.0%
GACATTGTAAAAATACTCCA+CGG - chr5_4:29331959-29331978 None:intergenic 30.0%
!! GTGGAGTATTTTTACAATGT+CGG + chr5_4:29331958-29331977 Msa0847390:intron 30.0%
! TTTTTACAATGTCGGTGTAT+TGG + chr5_4:29331966-29331985 Msa0847390:intron 30.0%
TTACAAATGCATGTGATACA+CGG - chr5_4:29332013-29332032 None:intergenic 30.0%
!!! TATATTTCCATTTTTTGGCC+AGG + chr5_4:29332387-29332406 Msa0847390:intron 30.0%
! CTCAGGTTAGATATATTTTG+GGG + chr5_4:29332591-29332610 Msa0847390:CDS 30.0%
TTACCTAAAACACCATTCAT+TGG - chr5_4:29332850-29332869 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr5_4:29333385-29333404 None:intergenic 30.0%
!!! GAGTGCAGAAATTTTTTGTA+GGG - chr5_4:29332985-29333004 None:intergenic 30.0%
!!! TGAGTGCAGAAATTTTTTGT+AGG - chr5_4:29332986-29333005 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+CGG - chr5_4:29333245-29333264 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr5_4:29333385-29333404 Msa0847390:intron 30.0%
! TTACAAGGTTGCAATTTTGT+AGG + chr5_4:29333400-29333419 Msa0847390:intron 30.0%
! TACAAGGTTGCAATTTTGTA+GGG + chr5_4:29333401-29333420 Msa0847390:intron 30.0%
CCAGATGGAATTATCTATTA+GGG - chr5_4:29333444-29333463 None:intergenic 30.0%
ACCAGATGGAATTATCTATT+AGG - chr5_4:29333445-29333464 None:intergenic 30.0%
GAGTGGTAAAGATCTTATAT+CGG + chr5_4:29333580-29333599 Msa0847390:CDS 30.0%
TTTGTATCCTCCAATTATCT+CGG + chr5_4:29333772-29333791 Msa0847390:intron 30.0%
AAGTGAATTTCCAACAAGAT+TGG - chr5_4:29333924-29333943 None:intergenic 30.0%
TCTTGTTGGAAATTCACTTA+AGG + chr5_4:29333925-29333944 Msa0847390:intron 30.0%
AGAATGCTTAAACTTGAATC+AGG + chr5_4:29334124-29334143 Msa0847390:intron 30.0%
!! GAAAAAGTACTTCCAATTTC+AGG - chr5_4:29334446-29334465 None:intergenic 30.0%
!!! GGAAGTACTTTTTCATTTAC+TGG + chr5_4:29334452-29334471 Msa0847390:CDS 30.0%
AAAAGTAGAAACAGAATCTG+TGG + chr5_4:29334484-29334503 Msa0847390:CDS 30.0%
AAAATTCAGATCAGTTGTAC+CGG + chr5_4:29334724-29334743 Msa0847390:intron 30.0%
ATCCTTGTCTATAAGAATCA+TGG - chr5_4:29334821-29334840 None:intergenic 30.0%
TTCTTATAGACAAGGATTCT+TGG + chr5_4:29334824-29334843 Msa0847390:CDS 30.0%
TCTTATAGACAAGGATTCTT+GGG + chr5_4:29334825-29334844 Msa0847390:CDS 30.0%
TTATACGCAATCAAGAAACA+AGG + chr5_4:29334865-29334884 Msa0847390:CDS 30.0%
!!! TTCAGTTTTGGTTCATAGTA+AGG + chr5_4:29335627-29335646 Msa0847390:intron 30.0%
! GAAATGAACTTTCTGAAAAG+CGG - chr5_4:29335980-29335999 None:intergenic 30.0%
!! CCAAAAAAAAGCATCAAGAG+TGG - chr5_4:29328549-29328568 None:intergenic 35.0%
!!! CCACTCTTGATGCTTTTTTT+TGG + chr5_4:29328546-29328565 Msa0847390:five_prime_UTR 35.0%
GAAAATCTCAGTGAAATGTG+TGG - chr5_4:29328650-29328669 None:intergenic 35.0%
! GACAATAATGTCTTTGAGAG+TGG - chr5_4:29328781-29328800 None:intergenic 35.0%
!! TCTGGGTTTGCTTCAAATTT+TGG + chr5_4:29328922-29328941 Msa0847390:five_prime_UTR 35.0%
AAGATTCATGTTGTGGTGTT+TGG + chr5_4:29328959-29328978 Msa0847390:five_prime_UTR 35.0%
ATTGTGAATGGAAGAGTTTC+TGG + chr5_4:29329075-29329094 Msa0847390:CDS 35.0%
ATTCTAGTACAACATGTAGG+AGG + chr5_4:29329166-29329185 Msa0847390:CDS 35.0%
!!! TACTGTTTCTGTTGCTGTTT+TGG + chr5_4:29329190-29329209 Msa0847390:CDS 35.0%
!!! ACTGTTTCTGTTGCTGTTTT+GGG + chr5_4:29329191-29329210 Msa0847390:CDS 35.0%
GACATTGTAACGTTGTAACA+AGG - chr5_4:29329319-29329338 None:intergenic 35.0%
TACAACGTTACAATGTCAGT+AGG + chr5_4:29329322-29329341 Msa0847390:CDS 35.0%
! TAGGAAACAGCTTCATGTTT+TGG + chr5_4:29329341-29329360 Msa0847390:CDS 35.0%
TTGAGCTGAAGTAAAATGAG+AGG + chr5_4:29329525-29329544 Msa0847390:intron 35.0%
TGAGCTGAAGTAAAATGAGA+GGG + chr5_4:29329526-29329545 Msa0847390:intron 35.0%
CCTCCTTTCATCAATACAAT+TGG - chr5_4:29329712-29329731 None:intergenic 35.0%
! CCAATTGTATTGATGAAAGG+AGG + chr5_4:29329709-29329728 Msa0847390:CDS 35.0%
GTTAATGTGTCCGAAGAATT+TGG + chr5_4:29329773-29329792 Msa0847390:CDS 35.0%
GAGCAAAACGTTAACCAAAT+CGG - chr5_4:29329931-29329950 None:intergenic 35.0%
GTAAAAACTCTACCTTTCCA+CGG - chr5_4:29329953-29329972 None:intergenic 35.0%
GAGGCATATAAGATGTCTAA+AGG - chr5_4:29330068-29330087 None:intergenic 35.0%
! TGGTTGGTATACTGTAAAAC+AGG - chr5_4:29330183-29330202 None:intergenic 35.0%
! TTCTAGCAAGGGCATAAAAA+TGG - chr5_4:29330277-29330296 None:intergenic 35.0%
GAATCTTCAAACTTCTAGCA+AGG - chr5_4:29330289-29330308 None:intergenic 35.0%
!!! TGTCTGGCTTTTGTTTACTA+AGG + chr5_4:29330672-29330691 Msa0847390:CDS 35.0%
AAGGAAGAATCAAAAGCAGA+AGG + chr5_4:29330691-29330710 Msa0847390:CDS 35.0%
TCAAAAGCAGAAGGTAGTTA+AGG + chr5_4:29330700-29330719 Msa0847390:CDS 35.0%
TTTATGTCAGTTGGAATCCT+TGG + chr5_4:29330815-29330834 Msa0847390:CDS 35.0%
TAAATAACCATGCAGAACCA+AGG - chr5_4:29330835-29330854 None:intergenic 35.0%
!! TTGGTTCTGCATGGTTATTT+AGG + chr5_4:29330834-29330853 Msa0847390:CDS 35.0%
TGGAGAATATACAGAGAGTT+CGG + chr5_4:29331230-29331249 Msa0847390:CDS 35.0%
TGAAAGTTCTCCATTCTGAT+AGG + chr5_4:29331292-29331311 Msa0847390:CDS 35.0%
CAAAATGCATCCTATCAGAA+TGG - chr5_4:29331305-29331324 None:intergenic 35.0%
GGTGCATATTCATCTTGAAT+GGG - chr5_4:29331417-29331436 None:intergenic 35.0%
TGGTGCATATTCATCTTGAA+TGG - chr5_4:29331418-29331437 None:intergenic 35.0%
AGTCGTATTTGCTCAAGAAA+CGG + chr5_4:29331437-29331456 Msa0847390:CDS 35.0%
! TGAGAATATTTTGCGAGCAA+GGG + chr5_4:29331674-29331693 Msa0847390:CDS 35.0%
CTACTAAAGTCCAATTACCT+CGG + chr5_4:29331732-29331751 Msa0847390:intron 35.0%
TTGTAAAAATACTCCACGGT+AGG - chr5_4:29331955-29331974 None:intergenic 35.0%
ATTGGATGTAATGTGTGTGT+TGG + chr5_4:29331984-29332003 Msa0847390:intron 35.0%
TATACACTGTCACTGTAAAG+AGG - chr5_4:29332038-29332057 None:intergenic 35.0%
! GTGTGTTGTTATCCATGTAT+TGG + chr5_4:29332091-29332110 Msa0847390:intron 35.0%
GTTGTTATCCATGTATTGGA+AGG + chr5_4:29332095-29332114 Msa0847390:intron 35.0%
TCTGATCCTATTACGATGTA+TGG + chr5_4:29332223-29332242 Msa0847390:CDS 35.0%
TAAGCCAGTATCAAGAACAT+CGG - chr5_4:29332251-29332270 None:intergenic 35.0%
TGCAACAAAATTGTTTCCGA+TGG + chr5_4:29332631-29332650 Msa0847390:intron 35.0%
AATCCTAACATTCTTGCCAT+CGG - chr5_4:29332650-29332669 None:intergenic 35.0%
TAATTCTCTCTTGACCTCAA+AGG + chr5_4:29332771-29332790 Msa0847390:intron 35.0%
AAAGAGAAACCAATCCTTTG+AGG - chr5_4:29332788-29332807 None:intergenic 35.0%
! ACTCCAATGAATGGTGTTTT+AGG + chr5_4:29332844-29332863 Msa0847390:intron 35.0%
!!! TGTTTTTGGTCCCTACAAAA+TGG + chr5_4:29332912-29332931 Msa0847390:intron 35.0%
CCCTAATAGATAATTCCATC+TGG + chr5_4:29333441-29333460 Msa0847390:intron 35.0%
AATCCATCTGATTGTCATCA+AGG - chr5_4:29333541-29333560 None:intergenic 35.0%
! TCTTATATCGGTTATAAGCG+AGG + chr5_4:29333592-29333611 Msa0847390:CDS 35.0%
! ACTTCATCTAGAATTGCATG+TGG - chr5_4:29333677-29333696 None:intergenic 35.0%
TCTGAAAAGTCCGATGAAAA+AGG + chr5_4:29333710-29333729 Msa0847390:CDS 35.0%
!! CACCTCAATTCCTTTTTCAT+CGG - chr5_4:29333723-29333742 None:intergenic 35.0%
!! ATTATTTGTCGGAAGCGTTT+AGG - chr5_4:29333899-29333918 None:intergenic 35.0%
!! TGTTTTTGTCTCGATTCATC+TGG + chr5_4:29334055-29334074 Msa0847390:intron 35.0%
AAACTTGAATCAGGACATGT+CGG + chr5_4:29334133-29334152 Msa0847390:intron 35.0%
AGAACATGCAATACATTGAG+TGG + chr5_4:29334158-29334177 Msa0847390:CDS 35.0%
! GCATGAAAGGTGTAAATATG+CGG - chr5_4:29334316-29334335 None:intergenic 35.0%
CATATTTACACCTTTCATGC+AGG + chr5_4:29334316-29334335 Msa0847390:CDS 35.0%
TAAATGTCTAGTTGACCTCA+TGG + chr5_4:29334394-29334413 Msa0847390:CDS 35.0%
AAATGTCTAGTTGACCTCAT+GGG + chr5_4:29334395-29334414 Msa0847390:CDS 35.0%
TTTGTAAGTGAGCCTGAAAT+TGG + chr5_4:29334431-29334450 Msa0847390:CDS 35.0%
TTTCTGATACTTGCAACTCA+AGG + chr5_4:29334672-29334691 Msa0847390:CDS 35.0%
ATCAAGAAACAAGGACAGAA+TGG + chr5_4:29334874-29334893 Msa0847390:CDS 35.0%
! CTTTCCAAAGATTTTTCTCC+TGG + chr5_4:29334918-29334937 Msa0847390:CDS 35.0%
ATGTACTAATGAAGCCTCTT+TGG + chr5_4:29334998-29335017 Msa0847390:CDS 35.0%
ATCAAAACACTTTGCCAAAG+AGG - chr5_4:29335015-29335034 None:intergenic 35.0%
! GATACACAAACGAATTTTGG+TGG + chr5_4:29335113-29335132 Msa0847390:CDS 35.0%
CAAGCATCAAAATTATGTGG+TGG - chr5_4:29335246-29335265 None:intergenic 35.0%
ATTAATTACCCGTCCATTTC+TGG - chr5_4:29335288-29335307 None:intergenic 35.0%
! TCTTACATGTTGCAGTTTTG+AGG + chr5_4:29335377-29335396 Msa0847390:intron 35.0%
AATTGCATGTGGGAAAGAAT+TGG + chr5_4:29335443-29335462 Msa0847390:CDS 35.0%
AAAGAATTGGCAGAGATGTT+TGG + chr5_4:29335456-29335475 Msa0847390:CDS 35.0%
AGAATGCAAAAAATGTGGGA+TGG + chr5_4:29335545-29335564 Msa0847390:CDS 35.0%
TAGAGTTGCTCTTCTTCAAA+TGG - chr5_4:29335588-29335607 None:intergenic 35.0%
TGAAGAAGAGCAACTCTATA+CGG + chr5_4:29335590-29335609 Msa0847390:CDS 35.0%
GAAAGCAGAATTCTGCATAA+TGG + chr5_4:29335713-29335732 Msa0847390:CDS 35.0%
GTGGTGTGAAAGAAAGAGAT+AGG - chr5_4:29328631-29328650 None:intergenic 40.0%
!! TGAGTTTTGTGAAGTGGGTT+TGG + chr5_4:29328889-29328908 Msa0847390:five_prime_UTR 40.0%
TGAATGTTCAGCTAAAGTGG+TGG + chr5_4:29328995-29329014 Msa0847390:five_prime_UTR 40.0%
AGGATGTCTGTGATTGTGAA+TGG + chr5_4:29329063-29329082 Msa0847390:exon 40.0%
!! GGAAGAGTTTCTGGTTCAAA+TGG + chr5_4:29329084-29329103 Msa0847390:CDS 40.0%
!!! CTGTTGCTGTTTTGGGTTTT+TGG + chr5_4:29329198-29329217 Msa0847390:CDS 40.0%
!! TTTGGTGCTGTTGTTGCTAT+AGG + chr5_4:29329216-29329235 Msa0847390:CDS 40.0%
!! TTGGTGCTGTTGTTGCTATA+GGG + chr5_4:29329217-29329236 Msa0847390:CDS 40.0%
TTCTTCGGACACATTAACTG+TGG - chr5_4:29329771-29329790 None:intergenic 40.0%
GACTTTGTTCACATGAAGCT+TGG + chr5_4:29329855-29329874 Msa0847390:CDS 40.0%
AGCTTGGATTATCATTCCCT+TGG + chr5_4:29329871-29329890 Msa0847390:CDS 40.0%
! ACTTTGAGTTTGTCGAAGCT+CGG + chr5_4:29330204-29330223 Msa0847390:intron 40.0%
ACCAGTAGTAATGCATCGTA+TGG + chr5_4:29330238-29330257 Msa0847390:intron 40.0%
TCCATACGATGCATTACTAC+TGG - chr5_4:29330242-29330261 None:intergenic 40.0%
! TTTTGCAATCACAGGTGATG+AGG + chr5_4:29330561-29330580 Msa0847390:intron 40.0%
TTTGCAATCACAGGTGATGA+GGG + chr5_4:29330562-29330581 Msa0847390:intron 40.0%
! GGATGTTGTTTGGTCCTTAT+TGG + chr5_4:29330629-29330648 Msa0847390:CDS 40.0%
GGGACAGTATAATGCCAATA+AGG - chr5_4:29330646-29330665 None:intergenic 40.0%
ACAAAAGCCAGACAACTTGT+GGG - chr5_4:29330666-29330685 None:intergenic 40.0%
AACAAAAGCCAGACAACTTG+TGG - chr5_4:29330667-29330686 None:intergenic 40.0%
!! CAATGTTGAATCCGCTTTTG+TGG - chr5_4:29330740-29330759 None:intergenic 40.0%
CTTGTGTCTACATTTCACCA+TGG + chr5_4:29330980-29330999 Msa0847390:CDS 40.0%
ATATGTTACCTGGTCAACTG+CGG - chr5_4:29331017-29331036 None:intergenic 40.0%
TTTGAGAGACCACTTACTAG+TGG + chr5_4:29331255-29331274 Msa0847390:CDS 40.0%
TAAGCAACACCACTAGTAAG+TGG - chr5_4:29331267-29331286 None:intergenic 40.0%
!! ATGCATTTTGAGAAGCAGCA+TGG + chr5_4:29331315-29331334 Msa0847390:CDS 40.0%
!! ATTTTGAGAAGCAGCATGGT+TGG + chr5_4:29331319-29331338 Msa0847390:CDS 40.0%
GAAAATGGAAACTGAGAACG+AGG + chr5_4:29331350-29331369 Msa0847390:CDS 40.0%
GTTTCTTGAGCAAATACGAC+TGG - chr5_4:29331438-29331457 None:intergenic 40.0%
TATCCATCGACATGATGTCA+GGG + chr5_4:29331472-29331491 Msa0847390:CDS 40.0%
! GTGAGAATATTTTGCGAGCA+AGG + chr5_4:29331673-29331692 Msa0847390:CDS 40.0%
AAGTACAACACCGAGGTAAT+TGG - chr5_4:29331745-29331764 None:intergenic 40.0%
CAAATGTAAGTACAACACCG+AGG - chr5_4:29331752-29331771 None:intergenic 40.0%
TAGTTACATTCATCCTACCG+TGG + chr5_4:29331939-29331958 Msa0847390:intron 40.0%
!! TCCATGTATTGGAAGGTATC+TGG + chr5_4:29332102-29332121 Msa0847390:intron 40.0%
!! CCATGTATTGGAAGGTATCT+GGG + chr5_4:29332103-29332122 Msa0847390:intron 40.0%
! CACAAGTGATGGAACATCAT+AGG - chr5_4:29332134-29332153 None:intergenic 40.0%
CTATGATGTTCCATCACTTG+TGG + chr5_4:29332132-29332151 Msa0847390:CDS 40.0%
GTCATACACATTGACAGCAA+TGG - chr5_4:29332191-29332210 None:intergenic 40.0%
TCGGTACCATACATCGTAAT+AGG - chr5_4:29332232-29332251 None:intergenic 40.0%
! ACGTAAGCGGTCTAGATTTT+GGG + chr5_4:29332275-29332294 Msa0847390:CDS 40.0%
! TGCATCTCATGTTTTCGTAG+TGG - chr5_4:29332304-29332323 None:intergenic 40.0%
ATTTCCTTGGACAGCATTCT+GGG + chr5_4:29332427-29332446 Msa0847390:CDS 40.0%
GGTAATAACAAATACCCCCA+AGG - chr5_4:29332456-29332475 None:intergenic 40.0%
TTTCCGATGGCAAGAATGTT+AGG + chr5_4:29332644-29332663 Msa0847390:intron 40.0%
CAACAGTTTCACATGAGATC+AGG + chr5_4:29332821-29332840 Msa0847390:intron 40.0%
!! TACAAGGTCGCCATTTTGTA+GGG - chr5_4:29332925-29332944 None:intergenic 40.0%
!! TTACAAGGTCGCCATTTTGT+AGG - chr5_4:29332926-29332945 None:intergenic 40.0%
ATCAACATTTGCAGCATACC+TGG - chr5_4:29333509-29333528 None:intergenic 40.0%
AGGTATGCTGCAAATGTTGA+TGG + chr5_4:29333508-29333527 Msa0847390:intron 40.0%
! TGACCTTGATGACAATCAGA+TGG + chr5_4:29333535-29333554 Msa0847390:CDS 40.0%
TCTCTATCAAGCTAAGATCG+AGG + chr5_4:29333616-29333635 Msa0847390:CDS 40.0%
GTCCGATGAAAAAGGAATTG+AGG + chr5_4:29333718-29333737 Msa0847390:CDS 40.0%
AGACTGAATGCCGAGATAAT+TGG - chr5_4:29333785-29333804 None:intergenic 40.0%
CCAACTGTACTCAACCAAAA+AGG - chr5_4:29333832-29333851 None:intergenic 40.0%
!!! CCTTTTTGGTTGAGTACAGT+TGG + chr5_4:29333829-29333848 Msa0847390:intron 40.0%
CAAGTACCTGAAGTTGTCAT+CGG + chr5_4:29333869-29333888 Msa0847390:intron 40.0%
!! ATCATCTCTTTTAGCTGCTG+CGG + chr5_4:29333971-29333990 Msa0847390:intron 40.0%
! ACATTGAGTGGATTTCCTGT+AGG + chr5_4:29334170-29334189 Msa0847390:CDS 40.0%
GATTTCCTGTAGGAAACAGA+TGG + chr5_4:29334180-29334199 Msa0847390:CDS 40.0%
! CTTTTCCATCTGTTTCCTAC+AGG - chr5_4:29334188-29334207 None:intergenic 40.0%
TAGGAAACAGATGGAAAAGC+TGG + chr5_4:29334189-29334208 Msa0847390:CDS 40.0%
AGGAAACAGATGGAAAAGCT+GGG + chr5_4:29334190-29334209 Msa0847390:CDS 40.0%
!! AAATATGCGGCTTTGAGCAT+CGG - chr5_4:29334303-29334322 None:intergenic 40.0%
TTACTAATGCTCTCAAACCC+TGG - chr5_4:29334550-29334569 None:intergenic 40.0%
AAAGCAAGCAGATTGAAGAC+TGG - chr5_4:29334648-29334667 None:intergenic 40.0%
GGCCATGATTCTTATAGACA+AGG + chr5_4:29334816-29334835 Msa0847390:CDS 40.0%
! TTTAGCTCCTTCTGCTCATT+GGG - chr5_4:29334958-29334977 None:intergenic 40.0%
! TTGTTTTCTCCCAGTTCCAA+GGG - chr5_4:29335055-29335074 None:intergenic 40.0%
!! TTTGTTTTCTCCCAGTTCCA+AGG - chr5_4:29335056-29335075 None:intergenic 40.0%
GTGAACAGAAAAGTTGCAGA+AGG + chr5_4:29335150-29335169 Msa0847390:CDS 40.0%
!! GAAGGTGTTCTGCGAAAATA+TGG + chr5_4:29335168-29335187 Msa0847390:CDS 40.0%
TTACCTCGTTCTCCATATAC+CGG - chr5_4:29335416-29335435 None:intergenic 40.0%
TCAGCTGTCATAGCTAGTAT+TGG - chr5_4:29335504-29335523 None:intergenic 40.0%
ATGCAGAATTCTGCTTTCGA+AGG - chr5_4:29335711-29335730 None:intergenic 40.0%
!! TGCATAATGGATCTCAGCTA+TGG + chr5_4:29335726-29335745 Msa0847390:CDS 40.0%
TACATGGAATCACTCATTGC+AGG + chr5_4:29336013-29336032 Msa0847390:CDS 40.0%
TGGTTGTTCAGAGTTGAGTG+AGG + chr5_4:29328566-29328585 Msa0847390:five_prime_UTR 45.0%
!! GGTTTGGTGAGAGAGATTCT+GGG + chr5_4:29328905-29328924 Msa0847390:five_prime_UTR 45.0%
!! TTGTTGCTATAGGGAGCGTT+TGG + chr5_4:29329226-29329245 Msa0847390:CDS 45.0%
!!! GTTTTGGCTTCCTTGTTCTC+AGG + chr5_4:29329357-29329376 Msa0847390:CDS 45.0%
CTGATCTGATCCTGAGAACA+AGG - chr5_4:29329370-29329389 None:intergenic 45.0%
CTTGTTCTCAGGATCAGATC+AGG + chr5_4:29329368-29329387 Msa0847390:CDS 45.0%
! CTCTGCACTTTTGTCCGATT+TGG + chr5_4:29329914-29329933 Msa0847390:CDS 45.0%
! TTGGTTAACGTTTTGCTCCG+TGG + chr5_4:29329933-29329952 Msa0847390:CDS 45.0%
! TAACGTTTTGCTCCGTGGAA+AGG + chr5_4:29329938-29329957 Msa0847390:CDS 45.0%
GTGCATGTTTGCTTCCACAT+TGG + chr5_4:29330108-29330127 Msa0847390:intron 45.0%
TGTTTGCTTCCACATTGGTG+TGG + chr5_4:29330113-29330132 Msa0847390:intron 45.0%
CATTCAACTCCACACCAATG+TGG - chr5_4:29330125-29330144 None:intergenic 45.0%
TTGGTGTGGAGTTGAATGTG+CGG + chr5_4:29330127-29330146 Msa0847390:intron 45.0%
CGACAAACTCAAAGTGTGGT+TGG - chr5_4:29330199-29330218 None:intergenic 45.0%
GCTTCGACAAACTCAAAGTG+TGG - chr5_4:29330203-29330222 None:intergenic 45.0%
ATACTGTCCCACAAGTTGTC+TGG + chr5_4:29330656-29330675 Msa0847390:CDS 45.0%
CGGATTCAACATTGTATGCC+CGG + chr5_4:29330746-29330765 Msa0847390:CDS 45.0%
TTGTATGCCCGGTCATTCAA+AGG + chr5_4:29330757-29330776 Msa0847390:CDS 45.0%
ACCAGTAGCCTTTGAATGAC+CGG - chr5_4:29330768-29330787 None:intergenic 45.0%
GTCATTCAAAGGCTACTGGT+TGG + chr5_4:29330768-29330787 Msa0847390:CDS 45.0%
! ATTCAAAGGCTACTGGTTGG+CGG + chr5_4:29330771-29330790 Msa0847390:CDS 45.0%
!! TTGGAATCCTTGGTTCTGCA+TGG + chr5_4:29330825-29330844 Msa0847390:CDS 45.0%
ACACAAGAATAGCGAGAGCA+TGG - chr5_4:29330967-29330986 None:intergenic 45.0%
!! CTCTTATTGGGGTATTGCCT+CGG + chr5_4:29331053-29331072 Msa0847390:intron 45.0%
!! TCTTATTGGGGTATTGCCTC+GGG + chr5_4:29331054-29331073 Msa0847390:intron 45.0%
AATATGAACTAGCAGACCCG+AGG - chr5_4:29331073-29331092 None:intergenic 45.0%
TATTCATCTTGAATGGGCGC+TGG - chr5_4:29331411-29331430 None:intergenic 45.0%
GTATCCATCGACATGATGTC+AGG + chr5_4:29331471-29331490 Msa0847390:CDS 45.0%
GTGTGATAGCAAGCTAAGAG+AGG - chr5_4:29331506-29331525 None:intergenic 45.0%
GTAGCTTCAATACGCTGTTC+AGG - chr5_4:29331810-29331829 None:intergenic 45.0%
ACAGCGTATTGAAGCTACTG+TGG + chr5_4:29331812-29331831 Msa0847390:intron 45.0%
CAGCGTATTGAAGCTACTGT+GGG + chr5_4:29331813-29331832 Msa0847390:intron 45.0%
AGCGTATTGAAGCTACTGTG+GGG + chr5_4:29331814-29331833 Msa0847390:intron 45.0%
GTGATGTGGCAACACATCAT+AGG - chr5_4:29331914-29331933 None:intergenic 45.0%
CCCAGATACCTTCCAATACA+TGG - chr5_4:29332106-29332125 None:intergenic 45.0%
AGAAGCTTGTCCACAAGTGA+TGG - chr5_4:29332145-29332164 None:intergenic 45.0%
!! GGTACCGATGTTCTTGATAC+TGG + chr5_4:29332244-29332263 Msa0847390:CDS 45.0%
! ACTGGCTTACTACACGTAAG+CGG + chr5_4:29332262-29332281 Msa0847390:CDS 45.0%
! CACGTAAGCGGTCTAGATTT+TGG + chr5_4:29332274-29332293 Msa0847390:CDS 45.0%
! CGTAAGCGGTCTAGATTTTG+GGG + chr5_4:29332276-29332295 Msa0847390:CDS 45.0%
GAAAACATGAGATGCACTGC+AGG + chr5_4:29332308-29332327 Msa0847390:CDS 45.0%
GCTTGAACCTGGCCAAAAAA+TGG - chr5_4:29332397-29332416 None:intergenic 45.0%
AATGCTGTCCAAGGAAATGG+AGG - chr5_4:29332425-29332444 None:intergenic 45.0%
CAGAATGCTGTCCAAGGAAA+TGG - chr5_4:29332428-29332447 None:intergenic 45.0%
CATTTCCTTGGACAGCATTC+TGG + chr5_4:29332426-29332445 Msa0847390:CDS 45.0%
TGCAGATGTCGCAAAATCTC+AGG + chr5_4:29332574-29332593 Msa0847390:CDS 45.0%
CTCTCTTGACCTCAAAGGAT+TGG + chr5_4:29332776-29332795 Msa0847390:intron 45.0%
GAGATCAGGACTCCAATGAA+TGG + chr5_4:29332835-29332854 Msa0847390:intron 45.0%
TCCATCTGGTCAACACTTGT+TGG + chr5_4:29333455-29333474 Msa0847390:intron 45.0%
TATCAAGCTAAGATCGAGGC+AGG + chr5_4:29333620-29333639 Msa0847390:CDS 45.0%
CTGAATGCCGAGATAATTGG+AGG - chr5_4:29333782-29333801 None:intergenic 45.0%
CGATGACAACTTCAGGTACT+TGG - chr5_4:29333871-29333890 None:intergenic 45.0%
GAAGAGTCCACTTCACATCA+TGG + chr5_4:29334088-29334107 Msa0847390:intron 45.0%
ACTGCATCCATGATGTGAAG+TGG - chr5_4:29334098-29334117 None:intergenic 45.0%
CCTCGACTGTTACTAGTAGT+TGG - chr5_4:29334259-29334278 None:intergenic 45.0%
CCAACTACTAGTAACAGTCG+AGG + chr5_4:29334256-29334275 Msa0847390:CDS 45.0%
GAACTATCAGCCTGCATGAA+AGG - chr5_4:29334329-29334348 None:intergenic 45.0%
AGTTCCACATCGCGAACATA+CGG + chr5_4:29334344-29334363 Msa0847390:CDS 45.0%
ACATACGGTGGAACTGGAAT+AGG + chr5_4:29334359-29334378 Msa0847390:CDS 45.0%
ATCCAATTTCTCCTCCCATG+AGG - chr5_4:29334412-29334431 None:intergenic 45.0%
CAGAATCTGTGGATGAGAAG+TGG + chr5_4:29334495-29334514 Msa0847390:CDS 45.0%
GTGGCAGAAGAATAACCCTT+TGG + chr5_4:29334514-29334533 Msa0847390:CDS 45.0%
TAGAAGAAAAATCCGGGCTG+AGG + chr5_4:29334574-29334593 Msa0847390:CDS 45.0%
TTACACGATATCACCTGCAG+AGG + chr5_4:29334597-29334616 Msa0847390:CDS 45.0%
GATCAGTTGTACCGGACATT+AGG + chr5_4:29334732-29334751 Msa0847390:intron 45.0%
! GCGTCGACATACTGAAAGAA+TGG - chr5_4:29334792-29334811 None:intergenic 45.0%
TTTCAGTATGTCGACGCAGT+TGG + chr5_4:29334795-29334814 Msa0847390:intron 45.0%
AGACAAGGATTCTTGGGACA+AGG + chr5_4:29334831-29334850 Msa0847390:CDS 45.0%
GTGGCCAGGAGAAAAATCTT+TGG - chr5_4:29334925-29334944 None:intergenic 45.0%
TTAGCTCCTTCTGCTCATTG+GGG - chr5_4:29334957-29334976 None:intergenic 45.0%
! CTTTAGCTCCTTCTGCTCAT+TGG - chr5_4:29334959-29334978 None:intergenic 45.0%
CAGAAGGAGCTAAAGTCAGT+TGG + chr5_4:29334964-29334983 Msa0847390:CDS 45.0%
TACAGAGAATCCCTTGGAAC+TGG + chr5_4:29335042-29335061 Msa0847390:CDS 45.0%
ACAGAGAATCCCTTGGAACT+GGG + chr5_4:29335043-29335062 Msa0847390:CDS 45.0%
GGATCTCCAAATGCCAGAAA+TGG + chr5_4:29335272-29335291 Msa0847390:CDS 45.0%
CTCCAAATGCCAGAAATGGA+CGG + chr5_4:29335276-29335295 Msa0847390:CDS 45.0%
TCCAAATGCCAGAAATGGAC+GGG + chr5_4:29335277-29335296 Msa0847390:CDS 45.0%
!!! GTTGCAGTTTTGAGGTGACT+AGG + chr5_4:29335385-29335404 Msa0847390:intron 45.0%
TTGAGGTGACTAGGCTAATC+CGG + chr5_4:29335394-29335413 Msa0847390:CDS 45.0%
GACTAGGCTAATCCGGTATA+TGG + chr5_4:29335401-29335420 Msa0847390:CDS 45.0%
AATCCGGTATATGGAGAACG+AGG + chr5_4:29335410-29335429 Msa0847390:CDS 45.0%
CTACTACAGCTGATGCAACT+CGG + chr5_4:29335685-29335704 Msa0847390:intron 45.0%
GTGTCGTGTTTCATCATCCT+TGG + chr5_4:29335766-29335785 Msa0847390:intron 45.0%
!!! TTTGATTTAATTAAAAATAA+TGG - chr5_4:29329484-29329503 None:intergenic 5.0%
!! GGGTTTGGTGAGAGAGATTC+TGG + chr5_4:29328904-29328923 Msa0847390:five_prime_UTR 50.0%
TGGTGTGGAGTTGAATGTGC+GGG + chr5_4:29330128-29330147 Msa0847390:intron 50.0%
ATCCACCTGCTCCACAAAAG+CGG + chr5_4:29330726-29330745 Msa0847390:CDS 50.0%
!! TGAATCCGCTTTTGTGGAGC+AGG - chr5_4:29330734-29330753 None:intergenic 50.0%
CCAGTAGCCTTTGAATGACC+GGG - chr5_4:29330767-29330786 None:intergenic 50.0%
GGCTCTCTCATCACACATAG+TGG - chr5_4:29330903-29330922 None:intergenic 50.0%
! GAATAGCGAGAGCATGGACA+TGG - chr5_4:29330961-29330980 None:intergenic 50.0%
CTGCGGAAGGATGTTTACCA+TGG - chr5_4:29331000-29331019 None:intergenic 50.0%
CTTCCCTGACATCATGTCGA+TGG - chr5_4:29331478-29331497 None:intergenic 50.0%
CATCGACATGATGTCAGGGA+AGG + chr5_4:29331476-29331495 Msa0847390:CDS 50.0%
!!! ATTTTGCGAGCAAGGGCATC+TGG + chr5_4:29331681-29331700 Msa0847390:CDS 50.0%
!! GACAGCAATGGTTTGCTGAC+AGG - chr5_4:29332179-29332198 None:intergenic 50.0%
AGCATACGCCTCCATTTCCT+TGG + chr5_4:29332414-29332433 Msa0847390:CDS 50.0%
ACAGCATTCTGGGCATCCTT+GGG + chr5_4:29332437-29332456 Msa0847390:CDS 50.0%
!! GCCAACAAGTGTTGACCAGA+TGG - chr5_4:29333459-29333478 None:intergenic 50.0%
ACCACTCGTGTGAGCAGTTT+GGG - chr5_4:29333567-29333586 None:intergenic 50.0%
TACCACTCGTGTGAGCAGTT+TGG - chr5_4:29333568-29333587 None:intergenic 50.0%
GGCAGGCAAACTAGAACTTG+AGG + chr5_4:29333637-29333656 Msa0847390:CDS 50.0%
CTAGTAACAGTCGAGGACAC+TGG + chr5_4:29334263-29334282 Msa0847390:CDS 50.0%
ACAGTCGAGGACACTGGTAT+AGG + chr5_4:29334269-29334288 Msa0847390:CDS 50.0%
TGTCTAGTTGACCTCATGGG+AGG + chr5_4:29334398-29334417 Msa0847390:CDS 50.0%
GACCTCATGGGAGGAGAAAT+TGG + chr5_4:29334407-29334426 Msa0847390:CDS 50.0%
TCTCAAACCCTGGAACTCAG+AGG - chr5_4:29334540-29334559 None:intergenic 50.0%
GATATCGTGTAACCTCAGCC+CGG - chr5_4:29334589-29334608 None:intergenic 50.0%
ACGATATCACCTGCAGAGGT+TGG + chr5_4:29334601-29334620 Msa0847390:CDS 50.0%
CGATATCACCTGCAGAGGTT+GGG + chr5_4:29334602-29334621 Msa0847390:CDS 50.0%
CAAGGACAGAATGGCGTCAA+AGG + chr5_4:29334883-29334902 Msa0847390:CDS 50.0%
CGCTACTACAGAGAATCCCT+TGG + chr5_4:29335036-29335055 Msa0847390:CDS 50.0%
TGGAGCAGTAGTTACCTGTG+TGG + chr5_4:29335188-29335207 Msa0847390:CDS 50.0%
AGCAGTAGTTACCTGTGTGG+AGG + chr5_4:29335191-29335210 Msa0847390:CDS 50.0%
GCAGTAGTTACCTGTGTGGA+GGG + chr5_4:29335192-29335211 Msa0847390:CDS 50.0%
!! ACCCGTCCATTTCTGGCATT+TGG - chr5_4:29335281-29335300 None:intergenic 50.0%
AGAGCAACTCTATACGGCAG+TGG + chr5_4:29335596-29335615 Msa0847390:CDS 50.0%
! GTGGCACGTGTCTTCAGTTT+TGG + chr5_4:29335615-29335634 Msa0847390:intron 50.0%
ATCACTCATTGCAGGAGCAG+AGG + chr5_4:29336021-29336040 Msa0847390:CDS 50.0%
! GATGAGGGTGTGTGCGATTG+TGG + chr5_4:29330577-29330596 Msa0847390:CDS 55.0%
!! ATCCGCTTTTGTGGAGCAGG+TGG - chr5_4:29330731-29330750 None:intergenic 55.0%
CCCGGTCATTCAAAGGCTAC+TGG + chr5_4:29330764-29330783 Msa0847390:CDS 55.0%
ACATCCTTCCGCAGTTGACC+AGG + chr5_4:29331006-29331025 Msa0847390:CDS 55.0%
GTTACCTGGTCAACTGCGGA+AGG - chr5_4:29331013-29331032 None:intergenic 55.0%
!! GGCGCTGGATCCAAGTTTTC+TGG - chr5_4:29331396-29331415 None:intergenic 55.0%
!! CGAGCAAGGGCATCTGGAAA+GGG + chr5_4:29331687-29331706 Msa0847390:CDS 55.0%
!! GAGCAAGGGCATCTGGAAAG+GGG + chr5_4:29331688-29331707 Msa0847390:CDS 55.0%
!! AGCAAGGGCATCTGGAAAGG+GGG + chr5_4:29331689-29331708 Msa0847390:CDS 55.0%
TGTTCAGGCGTAGCATCTGG+AGG - chr5_4:29331795-29331814 None:intergenic 55.0%
!! TGGTTTGCTGACAGGCAAGC+TGG - chr5_4:29332171-29332190 None:intergenic 55.0%
! TGGAGGCGTATGCTTGAACC+TGG - chr5_4:29332408-29332427 None:intergenic 55.0%
GATGCCCAGAATGCTGTCCA+AGG - chr5_4:29332434-29332453 None:intergenic 55.0%
GACAGCATTCTGGGCATCCT+TGG + chr5_4:29332436-29332455 Msa0847390:CDS 55.0%
CAGCATTCTGGGCATCCTTG+GGG + chr5_4:29332438-29332457 Msa0847390:CDS 55.0%
AGCATTCTGGGCATCCTTGG+GGG + chr5_4:29332439-29332458 Msa0847390:CDS 55.0%
GGATCGCCGATGACAACTTC+AGG - chr5_4:29333878-29333897 None:intergenic 55.0%
!! ATGCGGCTTTGAGCATCGGT+AGG - chr5_4:29334299-29334318 None:intergenic 55.0%
TCCACATCGCGAACATACGG+TGG + chr5_4:29334347-29334366 Msa0847390:CDS 55.0%
TCCACCGTATGTTCGCGATG+TGG - chr5_4:29334351-29334370 None:intergenic 55.0%
TCGCGAACATACGGTGGAAC+TGG + chr5_4:29334353-29334372 Msa0847390:CDS 55.0%
CCTGGAACTCAGAGGCCAAA+GGG - chr5_4:29334532-29334551 None:intergenic 55.0%
CCTTTGGCCTCTGAGTTCCA+GGG + chr5_4:29334530-29334549 Msa0847390:CDS 55.0%
CTGCTCATTGGGGCTAAGGT+GGG - chr5_4:29334947-29334966 None:intergenic 55.0%
TCTGCTCATTGGGGCTAAGG+TGG - chr5_4:29334948-29334967 None:intergenic 55.0%
CCTTCTGCTCATTGGGGCTA+AGG - chr5_4:29334951-29334970 None:intergenic 55.0%
CCTTAGCCCCAATGAGCAGA+AGG + chr5_4:29334948-29334967 Msa0847390:CDS 55.0%
GTAGTTACCTGTGTGGAGGG+TGG + chr5_4:29335195-29335214 Msa0847390:CDS 55.0%
TACCTGTGTGGAGGGTGGTA+AGG + chr5_4:29335200-29335219 Msa0847390:CDS 55.0%
GGGTGGTAAGGCTGCTCTTA+AGG + chr5_4:29335212-29335231 Msa0847390:CDS 55.0%
TTGCAGGAGCAGAGGTGAAC+AGG + chr5_4:29336029-29336048 Msa0847390:CDS 55.0%
!! GCGAGCAAGGGCATCTGGAA+AGG + chr5_4:29331686-29331705 Msa0847390:CDS 60.0%
CGCTGTTCAGGCGTAGCATC+TGG - chr5_4:29331798-29331817 None:intergenic 60.0%
GCCCAAACTGCTCACACGAG+TGG + chr5_4:29333563-29333582 Msa0847390:CDS 60.0%
CCCTTTGGCCTCTGAGTTCC+AGG + chr5_4:29334529-29334548 Msa0847390:CDS 60.0%
CCCTGGAACTCAGAGGCCAA+AGG - chr5_4:29334533-29334552 None:intergenic 60.0%
CAGACATGCCCAACCTCTGC+AGG - chr5_4:29334613-29334632 None:intergenic 60.0%
CTCATTGGGGCTAAGGTGGG+TGG - chr5_4:29334944-29334963 None:intergenic 60.0%
AGCCTTACCACCCTCCACAC+AGG - chr5_4:29335205-29335224 None:intergenic 60.0%
TGGGGCTAAGGTGGGTGGCC+AGG - chr5_4:29334939-29334958 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 29328533 29336063 29328533 ID=Msa0847390;Name=Msa0847390
chr5_4 mRNA 29328533 29336063 29328533 ID=Msa0847390-mRNA-1;Parent=Msa0847390;Name=Msa0847390-mRNA-1;_AED=0.15;_eAED=0.15;_QI=533|0.58|0.53|1|0.91|0.92|13|0|1162
chr5_4 exon 29328533 29329389 29328533 ID=Msa0847390-mRNA-1:exon:10894;Parent=Msa0847390-mRNA-1
chr5_4 exon 29329702 29329959 29329702 ID=Msa0847390-mRNA-1:exon:10895;Parent=Msa0847390-mRNA-1
chr5_4 exon 29330575 29331027 29330575 ID=Msa0847390-mRNA-1:exon:10896;Parent=Msa0847390-mRNA-1
chr5_4 exon 29331222 29331497 29331222 ID=Msa0847390-mRNA-1:exon:10897;Parent=Msa0847390-mRNA-1
chr5_4 exon 29331666 29331739 29331666 ID=Msa0847390-mRNA-1:exon:10898;Parent=Msa0847390-mRNA-1
chr5_4 exon 29332117 29332329 29332117 ID=Msa0847390-mRNA-1:exon:10899;Parent=Msa0847390-mRNA-1
chr5_4 exon 29332409 29332626 29332409 ID=Msa0847390-mRNA-1:exon:10900;Parent=Msa0847390-mRNA-1
chr5_4 exon 29333510 29333739 29333510 ID=Msa0847390-mRNA-1:exon:10901;Parent=Msa0847390-mRNA-1
chr5_4 exon 29334146 29334693 29334146 ID=Msa0847390-mRNA-1:exon:10902;Parent=Msa0847390-mRNA-1
chr5_4 exon 29334801 29335298 29334801 ID=Msa0847390-mRNA-1:exon:10903;Parent=Msa0847390-mRNA-1
chr5_4 exon 29335392 29335621 29335392 ID=Msa0847390-mRNA-1:exon:10904;Parent=Msa0847390-mRNA-1
chr5_4 exon 29335694 29335761 29335694 ID=Msa0847390-mRNA-1:exon:10905;Parent=Msa0847390-mRNA-1
chr5_4 exon 29335965 29336063 29335965 ID=Msa0847390-mRNA-1:exon:10906;Parent=Msa0847390-mRNA-1
chr5_4 five_prime_UTR 29328533 29329065 29328533 ID=Msa0847390-mRNA-1:five_prime_utr;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29329066 29329389 29329066 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29329702 29329959 29329702 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29330575 29331027 29330575 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29331222 29331497 29331222 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29331666 29331739 29331666 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29332117 29332329 29332117 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29332409 29332626 29332409 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29333510 29333739 29333510 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29334146 29334693 29334146 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29334801 29335298 29334801 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29335392 29335621 29335392 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29335694 29335761 29335694 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
chr5_4 CDS 29335965 29336063 29335965 ID=Msa0847390-mRNA-1:cds;Parent=Msa0847390-mRNA-1
Gene Sequence

>Msa0847390

ATGTCTGTGATTGTGAATGGAAGAGTTTCTGGTTCAAATGGAAGATGTTCTTCACCAAAAATCAAGTTTTGGAAAGGAAATGAGTCTTTGCATGTGTCTAATTCTAGTACAACATGTAGGAGGATACTGTTTCTGTTGCTGTTTTGGGTTTTTGGTGCTGTTGTTGCTATAGGGAGCGTTTGGTTTATGTTTAGTACTTTCAACTTTAAGCATTTGATTAAAGAAACAGCTTGTGAAAAGAGTACACAAACCTTGTTACAACGTTACAATGTCAGTAGGAAACAGCTTCATGTTTTGGCTTCCTTGTTCTCAGGATCAGATCAGATTTTGTCCAATTGTATTGATGAAAGGAGGCTTCAAATGTTGTTAAGTAGTGGTACAGTGAACACTCCACAGTTAATGTGTCCGAAGAATTTGGAGTTACAAAAGGAGCATAGATATGTTGCAGAATCTGTAGAACAATGCCCAATTCTTGATGACTTTGTTCACATGAAGCTTGGATTATCATTCCCTTGGAAAGCATATGTAACATTGGACTCTGCACTTTTGTCCGATTTGGTTAACGTTTTGCTCCGTGGAAAGGTGATGAGGGTGTGTGCGATTGTGGATAATGTGAATTTATCTAGTTTAATTAAAGGATGTTGTTTGGTCCTTATTGGCATTATACTGTCCCACAAGTTGTCTGGCTTTTGTTTACTAAGGAAGAATCAAAAGCAGAAGGTAGTTAAGGAGCATCCACCTGCTCCACAAAAGCGGATTCAACATTGTATGCCCGGTCATTCAAAGGCTACTGGTTGGCGGAGAAAAAAGTTGCTAGTTATTTTTATGTCAGTTGGAATCCTTGGTTCTGCATGGTTATTTAGGTACATGAGTTCAGACATTGCGCAAAGAAGAGAAGAAATGCTTGCCACTATGTGTGATGAGAGAGCCCGTATGTTGCAAGATCAATTTAACGTGAGCATGAACCATGTCCATGCTCTCGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCCGCAGTTGACCAGAAAATATTTGGAGAATATACAGAGAGTTCGGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGAATGTATTCCAGAAAACTTGGATCCAGCGCCCATTCAAGATGAATATGCACCAGTCGTATTTGCTCAAGAAACGGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTATCTGGGTGCATCCTATGATGTTCCATCACTTGTGGACAAGCTTCTTCACCAGCTTGCCTGTCAGCAAACCATTGCTGTCAATGTGTATGACACAACTAATGCATCTGATCCTATTACGATGTATGGTACCGATGTTCTTGATACTGGCTTACTACACGTAAGCGGTCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCACTGCAGGTTCAAGCATACGCCTCCATTTCCTTGGACAGCATTCTGGGCATCCTTGGGGGTATTTGTTATTACCTTTCTTCTTGGATATATATTTTATGCAGCAATAAATCGAATAGCTAAAGTGGAAGATGACTATTGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTCGCAAAATCTCAGGTTAGATATATTTTGGGGATCGTTGCTTTCTGTATGCTGCAAATGTTGATGGATACTGACCTTGATGACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTAAAGATCTTATATCGGTTATAAGCGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTAGAACTTGAGGCTGTAGCTTTTCATCCACATGCAATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAGTCCGATGAAAAAGGAATTGAGGACATGTCGGAAAGAACATGCAATACATTGAGTGGATTTCCTGTAGGAAACAGATGGAAAAGCTGGGAAAAGTTTCAAAAGTTAAATTTGGCGCATGAGTCAGAAACTATCCAACTACTAGTAACAGTCGAGGACACTGGTATAGGAATTCCTACCGATGCTCAAAGCCGCATATTTACACCTTTCATGCAGGCTGATAGTTCCACATCGCGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTTAGAAAAGTAGAAACAGAATCTGTGGATGAGAAGTGGCAGAAGAATAACCCTTTGGCCTCTGAGTTCCAGGGTTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCTGAGGTTACACGATATCACCTGCAGAGGTTGGGCATGTCTGTAGATGTAAATTCCAGTCTTCAATCTGCTTGCTTTTCTATTTCTGATACTTGCAACTCAAGTATGTCGACGCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGACAAGGAAAGTAGCATCTTATACGCAATCAAGAAACAAGGACAGAATGGCGTCAAAGGTGACTCGCTAAACTTTCCAAAGATTTTTCTCCTGGCCACCCACCTTAGCCCCAATGAGCAGAAGGAGCTAAAGTCAGTTGGTATCATAGATGATGTACTAATGAAGCCTCTTTGGCAAAGTGTTTTGATTCGCTACTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATAGACAGAAAAAAAGTATCCCAACTTGAAAATTTATTGATACACAAACGAATTTTGGTGGTCGATGATAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCGAAAATATGGAGCAGTAGTTACCTGTGTGGAGGGTGGTAAGGCTGCTCTTAAGGTGCTTAAGCCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGTTTTGAGGTGACTAGGCTAATCCGGTATATGGAGAACGAGGTAAATGAAAAAATTGCATGTGGGAAAGAATTGGCAGAGATGTTTGGTAACATTTCTTATTGGCACATACCAATACTAGCTATGACAGCTGATGTAACTCAAGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTTTGTGTCAAAGCCATTTGAAGAAGAGCAACTCTATACGGCAGTGGCACCTGATGCAACTCGGCCTTCGAAAGCAGAATTCTGCATAATGGATCTCAGCTATGGCTGTGTAGATATATTTTTCACTTGTCCGCTTTTCAGAAAGTTCATTTCAACTGCAATATATTACATGGAATCACTCATTGCAGGAGCAGAGGTGAACAGGAGTCAAAATTAA
Protein sequence

>Msa0847390

MSVIVNGRVSGSNGRCSSPKIKFWKGNESLHVSNSSTTCRRILFLLLFWVFGAVVAIGSVWFMFSTFNFKHLIKETACEKSTQTLLQRYNVSRKQLHVLASLFSGSDQILSNCIDERRLQMLLSSGTVNTPQLMCPKNLELQKEHRYVAESVEQCPILDDFVHMKLGLSFPWKAYVTLDSALLSDLVNVLLRGKVMRVCAIVDNVNLSSLIKGCCLVLIGIILSHKLSGFCLLRKNQKQKVVKEHPPAPQKRIQHCMPGHSKATGWRRKKLLVIFMSVGILGSAWLFRYMSSDIAQRREEMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQECIPENLDPAPIQDEYAPVVFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKYLGASYDVPSLVDKLLHQLACQQTIAVNVYDTTNASDPITMYGTDVLDTGLLHVSGLDFGDPLRKHEMHCRFKHTPPFPWTAFWASLGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQVRYILGIVAFCMLQMLMDTDLDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVAFHPHAILDEVLSLFSEKSDEKGIEDMSERTCNTLSGFPVGNRWKSWEKFQKLNLAHESETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKVETESVDEKWQKNNPLASEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVDVNSSLQSACFSISDTCNSSMSTQLAMILIDKDSWDKESSILYAIKKQGQNGVKGDSLNFPKIFLLATHLSPNEQKELKSVGIIDDVLMKPLWQSVLIRYYRESLGTGRKQIDRKKVSQLENLLIHKRILVVDDNAVNRKVAEGVLRKYGAVVTCVEGGKAALKVLKPPHNFDACFMDLQMPEMDGFEVTRLIRYMENEVNEKIACGKELAEMFGNISYWHIPILAMTADVTQASNEECKKCGMDDFVSKPFEEEQLYTAVAPDATRPSKAEFCIMDLSYGCVDIFFTCPLFRKFISTAIYYMESLIAGAEVNRSQN*