AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0440110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0440110 MtrunA17_Chr3g0113901 96.556 871 27 1 1 871 1 868 0.0 1736
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0440110 AT3G56040.1 62.685 879 313 9 3 870 5 879 0.0 1083

Find 255 sgRNAs with CRISPR-Local

Find 746 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGCTAGTCCAGCATTTC+TGG 0.108905 3_3:+6682365 None:intergenic
GCAAGTCTCTTTCATTATTA+AGG 0.122176 3_3:-6672849 Msa0440110:three_prime_UTR
ATTTCCTGTAATTATATTAT+TGG 0.163304 3_3:-6672939 Msa0440110:three_prime_UTR
TGGCGACTTACAACAGAAAA+TGG 0.168429 3_3:+6672780 None:intergenic
ATCCTGCTCTTGGTCCTCTT+TGG 0.182867 3_3:-6674966 Msa0440110:CDS
GATTGCATTGGAGGAGTAAT+TGG 0.185925 3_3:-6682051 Msa0440110:CDS
GGAAATTCTGGTGGTGGTTT+TGG 0.204275 3_3:-6682150 Msa0440110:CDS
TTCTTGTACTTCAAGTTATA+TGG 0.249345 3_3:-6680609 Msa0440110:CDS
AGCTACTGATGTTGTCTTAC+AGG 0.251449 3_3:-6673924 Msa0440110:intron
CTTCTAGGGTTTGCCAGACC+TGG 0.263501 3_3:-6680899 Msa0440110:intron
CGTTGATGATTCGAAGCTTT+TGG 0.263663 3_3:+6682424 None:intergenic
GGGCATCGATTCCCAAAATT+TGG 0.269316 3_3:+6681070 None:intergenic
TAGAGGTTGCAGAGCTCTTT+TGG 0.272546 3_3:-6674402 Msa0440110:CDS
CAGTTATCAGATTATGGTTC+TGG 0.272663 3_3:-6681166 Msa0440110:CDS
ATGCATCTCAAGCCGCTCTA+TGG 0.274293 3_3:-6681014 Msa0440110:CDS
ATGTTGCAGTTATCAGATTA+TGG 0.274564 3_3:-6681172 Msa0440110:intron
TACACTGAATTCGACAAGTT+TGG 0.277224 3_3:-6678891 Msa0440110:CDS
AGTGAAAGAAGGCCAAATTT+TGG 0.278373 3_3:-6681082 Msa0440110:CDS
TCCTGCTCTTGGTCCTCTTT+GGG 0.282075 3_3:-6674965 Msa0440110:CDS
GACAAGTTTGGGATTACTAA+TGG 0.289277 3_3:-6678879 Msa0440110:CDS
ACGAACTTGTGAATATTTGA+TGG 0.293728 3_3:+6672808 None:intergenic
TTAGTAGTAGAAATTATTAT+AGG 0.297631 3_3:+6673050 None:intergenic
GAGTCGTCGGTGATGGCTTC+TGG 0.302435 3_3:-6682234 Msa0440110:CDS
GATGAGAACTACGTTTATTC+AGG 0.303262 3_3:-6675012 Msa0440110:CDS
TTTCCTGTAATTATATTATT+GGG 0.303735 3_3:-6672938 Msa0440110:three_prime_UTR
AGAGAAAACGGTGGTGATTA+TGG 0.310242 3_3:+6682697 None:intergenic
AGGGGATGTGAAGATGAATT+TGG 0.311426 3_3:+6682822 None:intergenic
CAAGTCTCTTTCATTATTAA+GGG 0.312635 3_3:-6672848 Msa0440110:three_prime_UTR
TAACTCAGATCCCTTCGATA+TGG 0.322424 3_3:+6674429 None:intergenic
GACACCTGATGGTGCTCTAT+TGG 0.328369 3_3:-6675330 Msa0440110:CDS
ATCCTTCTTCATCCTGCTCT+TGG 0.330716 3_3:-6674976 Msa0440110:CDS
CCTTTGCCCATGATGCAGTA+TGG 0.331228 3_3:+6674208 None:intergenic
GTTAAGAGACCTGGGCTTCC+TGG 0.334728 3_3:+6673362 None:intergenic
TTTGTATTTAACACCATTCC+TGG 0.335076 3_3:+6678159 None:intergenic
CCTGGGTGAAATTTATCCTT+TGG 0.336683 3_3:-6680881 Msa0440110:CDS
ATCGACGCTGCGGTTGGATT+CGG 0.338258 3_3:-6682337 Msa0440110:CDS
TATTCATCTAGGTGCTATAA+TGG 0.342333 3_3:-6675947 Msa0440110:CDS
AGAAATGTCCAGATGGCAAC+TGG 0.346060 3_3:-6678938 Msa0440110:CDS
CAACCCAATAATATAATTAC+AGG 0.350203 3_3:+6672935 None:intergenic
GAGACCAGTTTGTATTCTTC+CGG 0.352518 3_3:+6681118 None:intergenic
TATAAGATGTTTGTATTAGC+TGG 0.355473 3_3:+6678237 None:intergenic
CTAATGGATCTCTTCCAAAA+AGG 0.356361 3_3:-6678863 Msa0440110:intron
ACACTGAATTCGACAAGTTT+GGG 0.356446 3_3:-6678890 Msa0440110:CDS
CATAATAGCCGAAAATGTTA+TGG 0.362868 3_3:-6674261 Msa0440110:CDS
GATTCTGGTAATGGAAATTC+TGG 0.364009 3_3:-6682162 Msa0440110:CDS
AGGTCTTATAAGAGATCTTC+AGG 0.365034 3_3:-6680764 Msa0440110:intron
ATTTCTACAATCAAGTTTGC+AGG 0.365245 3_3:-6678268 Msa0440110:intron
TGCGAAACACTCTCTTGGTT+TGG 0.366793 3_3:-6680513 Msa0440110:CDS
CTGGGTGAAATTTATCCTTT+GGG 0.366993 3_3:-6680880 Msa0440110:CDS
ATTTAAAGTTATTTCACAAC+TGG 0.367767 3_3:+6672725 None:intergenic
ATAAATTATGTAGATCAGTT+TGG 0.370232 3_3:-6678129 Msa0440110:CDS
ATCTTCAATTTGTATCCATC+TGG 0.370939 3_3:+6673389 None:intergenic
ATTTCAATTCATATTCATCT+AGG 0.374107 3_3:-6675958 Msa0440110:CDS
ATGATTGAGAAGATGGATTC+TGG 0.376036 3_3:-6682177 Msa0440110:CDS
TTACCATCTGCGGAGCTTGT+TGG 0.380348 3_3:-6678207 Msa0440110:CDS
CCTCTTCAATCGGATCTAAC+TGG 0.384754 3_3:+6673215 None:intergenic
CAAGAGCATGTGTTGTGTTC+GGG 0.388421 3_3:-6682276 Msa0440110:CDS
GTTTGGAGGATCATGAAATT+CGG 0.388697 3_3:-6682122 Msa0440110:CDS
TCAAGAGCATGTGTTGTGTT+CGG 0.394898 3_3:-6682277 Msa0440110:CDS
GGAACTTATTGTCCAACAAT+TGG 0.403417 3_3:-6681145 Msa0440110:CDS
TGTTGTGTTGTGTTGTGAGT+TGG 0.405310 3_3:+6682773 None:intergenic
GAGGGAATTGATTGGAGTTA+TGG 0.407417 3_3:-6674025 Msa0440110:CDS
TTTGGAGGATCATGAAATTC+GGG 0.407427 3_3:-6682121 Msa0440110:CDS
GTAACCCTCCTGGCCTTAGC+AGG 0.407592 3_3:-6680087 Msa0440110:CDS
CACTTCCTCCTCCTCCTTCA+CGG 0.414144 3_3:-6682895 Msa0440110:five_prime_UTR
CCGTATTCCCAGTTGCCATC+TGG 0.416223 3_3:+6678930 None:intergenic
ATCACGGAGGGAGGTGAGTC+TGG 0.417202 3_3:+6682473 None:intergenic
ACGGCAGCATTGCAGCAGGC+AGG 0.417616 3_3:+6680809 None:intergenic
GAACTTGTCATTATTGCTAC+AGG 0.417965 3_3:+6680570 None:intergenic
CAATAACGACGGACCTGACT+TGG 0.420916 3_3:+6680207 None:intergenic
CCCTGTGCGAAACACTCTCT+TGG 0.421940 3_3:-6680518 Msa0440110:CDS
TTGGGAATCGATGCCCCGAC+TGG 0.422601 3_3:-6681063 Msa0440110:CDS
CCATCTTCTGCACTGACAAC+CGG 0.425689 3_3:+6680362 None:intergenic
GCATCCTGTGACCGTGTCTC+AGG 0.434355 3_3:-6678993 Msa0440110:CDS
TTCGCGGCGGAAATTGAATC+CGG 0.435076 3_3:+6682500 None:intergenic
GAATTGGCAGCCTCTTGTTC+CGG 0.436440 3_3:-6680381 Msa0440110:intron
CACTGGGATTACAAGATAGA+AGG 0.441388 3_3:-6673169 Msa0440110:CDS
TTCTAGGGTTTGCCAGACCT+GGG 0.443387 3_3:-6680898 Msa0440110:intron
GTGCAACTGTGCGCCAAGTC+AGG 0.443469 3_3:-6680220 Msa0440110:intron
TTCAGTCCCTTGAGCAAGCC+TGG 0.446802 3_3:-6680317 Msa0440110:CDS
CAGAAAGGTCAAGCCCAGTC+GGG 0.452509 3_3:+6681049 None:intergenic
TGCATCTCAAGCCGCTCTAT+GGG 0.456669 3_3:-6681013 Msa0440110:CDS
CAGCGTCTCTGGTGGCAGAC+TGG 0.457973 3_3:-6676011 Msa0440110:CDS
GACCCTTTATTCCAGGTCAA+TGG 0.459047 3_3:-6674293 Msa0440110:intron
GTCGGTGATGGCTTCTGGTT+CGG 0.459134 3_3:-6682229 Msa0440110:CDS
GGATAAATTTCACCCAGGTC+TGG 0.462592 3_3:+6680886 None:intergenic
CGGAAATTGAATCCGGGAGG+TGG 0.466176 3_3:+6682507 None:intergenic
CCAGATGGCAACTGGGAATA+CGG 0.467549 3_3:-6678930 Msa0440110:CDS
GCTTGACCTTTCTGAAAATA+CGG 0.468467 3_3:-6681040 Msa0440110:CDS
CAGACATCTGATGTGGTTAG+TGG 0.468491 3_3:+6673111 None:intergenic
TTGTATATAATGAGCGGAGA+AGG 0.469118 3_3:-6675807 Msa0440110:CDS
ATAATAGCCGAAAATGTTAT+GGG 0.469425 3_3:-6674260 Msa0440110:CDS
GGCGAAGATGATTGAGAAGA+TGG 0.469555 3_3:-6682184 Msa0440110:CDS
CTGGTGGTCATGGTGTTATA+TGG 0.470626 3_3:-6680298 Msa0440110:CDS
TACAGAGTGAGACGTTTCTT+CGG 0.471842 3_3:-6682396 Msa0440110:CDS
AGTTCAACCTTTGCGACGTT+AGG 0.474096 3_3:-6673009 Msa0440110:three_prime_UTR
TCTTCCGGTCAACCAATTGT+TGG 0.474192 3_3:+6681133 None:intergenic
CCAGAAATGCTGGACTAGCT+AGG 0.474822 3_3:-6682365 Msa0440110:CDS
TGGACAGTGGAAGCTGGCAC+TGG 0.475964 3_3:-6673186 Msa0440110:CDS
GAGAAGATGGATTCTGGTAA+TGG 0.475984 3_3:-6682171 Msa0440110:CDS
ATTGCATTGGAGGAGTAATT+GGG 0.476083 3_3:-6682050 Msa0440110:intron
TTGAGCAAGCCTGGTGGTCA+TGG 0.479896 3_3:-6680308 Msa0440110:CDS
AGGTTCTATGATTGCATTGG+AGG 0.481250 3_3:-6682060 Msa0440110:CDS
CAAAACGGCAGCATTGCAGC+AGG 0.483983 3_3:+6680805 None:intergenic
GGATGAAGAAGGATAAGAAA+TGG 0.486008 3_3:+6674985 None:intergenic
GGTTCCTCTTCCAGAAATGC+TGG 0.486444 3_3:-6682375 Msa0440110:CDS
TGTGGGAGGACTTTGTTGGA+AGG 0.487462 3_3:-6680784 Msa0440110:CDS
TGTTGAACGAGGGAATTGAT+TGG 0.487686 3_3:-6674033 Msa0440110:CDS
GAAGAAGAAGAAGATGAAGA+TGG 0.489866 3_3:+6682594 None:intergenic
TCCGATTGAAGAGGGTATGA+TGG 0.493068 3_3:-6673206 Msa0440110:CDS
GGGATCTGAGTTACAAATAG+AGG 0.499477 3_3:-6674419 Msa0440110:CDS
TTTGAAGATGCCTTTGTCAT+GGG 0.499681 3_3:+6680268 None:intergenic
ATCAGTTTGGAAGACATTGT+AGG 0.500085 3_3:-6678116 Msa0440110:intron
TCCATCATACCCTCTTCAAT+CGG 0.501357 3_3:+6673205 None:intergenic
GGCGACTTACAACAGAAAAT+GGG 0.502318 3_3:+6672781 None:intergenic
GTTATGGTGGAAATGTGTAT+TGG 0.502486 3_3:-6674009 Msa0440110:CDS
CCGGTTGTCAGTGCAGAAGA+TGG 0.504113 3_3:-6680362 Msa0440110:CDS
AACCGATCCCTGCTAAGGCC+AGG 0.504929 3_3:+6680079 None:intergenic
GAGAGGTTCTATGATTGCAT+TGG 0.505264 3_3:-6682063 Msa0440110:CDS
AACGAAAAGAAAAGAGAAAA+CGG 0.505393 3_3:+6682685 None:intergenic
TTGTCCAACAATTGGTTGAC+CGG 0.510009 3_3:-6681137 Msa0440110:CDS
ATTTCTACTACTAAAATGAC+AGG 0.515642 3_3:-6673041 Msa0440110:three_prime_UTR
GATTTAGTTGATCCTAGCAC+TGG 0.516777 3_3:-6680838 Msa0440110:CDS
GGTAATGGAAATTCTGGTGG+TGG 0.517348 3_3:-6682156 Msa0440110:CDS
ATGACAAAGGCATCTTCAAA+TGG 0.517709 3_3:-6680265 Msa0440110:CDS
CAGAAATGCTGGACTAGCTA+GGG 0.518323 3_3:-6682364 Msa0440110:CDS
ATTCCAGGTCAATGGAAGCC+TGG 0.518813 3_3:-6674285 Msa0440110:intron
AAGTGAAGTGGAGTGAAGCA+TGG 0.519601 3_3:+6682725 None:intergenic
CTCCTGGCCTTAGCAGGGAT+CGG 0.519753 3_3:-6680081 Msa0440110:CDS
ATTTGAAGATGCCTTTGTCA+TGG 0.521616 3_3:+6680267 None:intergenic
GACATTCAAACACATGAACT+TGG 0.521993 3_3:+6672760 None:intergenic
TACAAATTGAAGATCATGCC+AGG 0.523183 3_3:-6673380 Msa0440110:CDS
AGAAGGAATTAATGTACTGA+TGG 0.523885 3_3:-6678964 Msa0440110:CDS
AACAAAGTCCTCCCACAAAA+CGG 0.525949 3_3:+6680790 None:intergenic
ACACTCTCTTGGTTTGGAAG+AGG 0.526496 3_3:-6680507 Msa0440110:CDS
AAATTGAATCCGGGAGGTGG+TGG 0.528692 3_3:+6682510 None:intergenic
ACCAAGAGAGTGTTTCGCAC+AGG 0.533505 3_3:+6680517 None:intergenic
CACATTCACGAAGTGAAAGA+AGG 0.535520 3_3:-6681093 Msa0440110:CDS
GATTAATAAGAATATAAGAA+GGG 0.536685 3_3:+6682803 None:intergenic
AAGATCATGCCAGGAAGCCC+AGG 0.536968 3_3:-6673371 Msa0440110:intron
TCCCAAAGAGGACCAAGAGC+AGG 0.537439 3_3:+6674964 None:intergenic
TGTATATAATGAGCGGAGAA+GGG 0.539015 3_3:-6675806 Msa0440110:CDS
AGCTACAGATGTAACCCTCC+TGG 0.539348 3_3:-6680097 Msa0440110:CDS
GTGAATCCATACTGCATCAT+GGG 0.541313 3_3:-6674214 Msa0440110:CDS
GGAGATGGAGTCGTCGGTGA+TGG 0.544908 3_3:-6682241 Msa0440110:CDS
CGGTTGTCAGTGCAGAAGAT+GGG 0.545148 3_3:-6680361 Msa0440110:CDS
TGATTAATAAGAATATAAGA+AGG 0.545450 3_3:+6682802 None:intergenic
TAGTCCAGCATTTCTGGAAG+AGG 0.546073 3_3:+6682371 None:intergenic
CATATAACACCATGACCACC+AGG 0.546105 3_3:+6680299 None:intergenic
GGAATTGATTGGAGTTATGG+TGG 0.547001 3_3:-6674022 Msa0440110:CDS
ATATACCGTGAAGGAGGAGG+AGG 0.547954 3_3:+6682890 None:intergenic
ATTGGAAACATGATGTGAAA+AGG 0.548474 3_3:-6673991 Msa0440110:CDS
AGGATATACCGTGAAGGAGG+AGG 0.550006 3_3:+6682887 None:intergenic
GTATGATGGACAGTGGAAGC+TGG 0.551683 3_3:-6673192 Msa0440110:CDS
GGTGAATCCATACTGCATCA+TGG 0.552323 3_3:-6674215 Msa0440110:CDS
AGCCGCTCTATGGGGTATAG+AGG 0.552596 3_3:-6681004 Msa0440110:intron
ACTAATATTGTAAAATTGAG+AGG 0.552818 3_3:-6672902 Msa0440110:three_prime_UTR
ATATGTTGATTTACCATCTG+CGG 0.552956 3_3:-6678217 Msa0440110:CDS
TACGGTGGTTCCATATCGAA+GGG 0.553092 3_3:-6674439 Msa0440110:CDS
TTACGGTGGTTCCATATCGA+AGG 0.553784 3_3:-6674440 Msa0440110:CDS
GATGTCTGCTGCGTGAATCA+TGG 0.554272 3_3:-6673096 Msa0440110:three_prime_UTR
GAATTATCACCACCACCTCC+CGG 0.556730 3_3:-6682519 Msa0440110:CDS
GGTGAAATTTATCCTTTGGG+AGG 0.556891 3_3:-6680877 Msa0440110:CDS
TGGAGACAAGTCTTTACGCC+AGG 0.557037 3_3:-6675752 Msa0440110:intron
GGCTTGCTCAAGGGACTGAA+CGG 0.558446 3_3:+6680320 None:intergenic
ATATCCAATAGAGCACCATC+AGG 0.558512 3_3:+6675326 None:intergenic
CATGTATTTGAAGTTCCAGA+TGG 0.559336 3_3:-6673404 Msa0440110:CDS
GACCAAGAGCAGGATGAAGA+AGG 0.559973 3_3:+6674974 None:intergenic
GGGAGAAACTATGCTGGAGA+TGG 0.560158 3_3:-6682256 Msa0440110:CDS
TGTGAATAGTATACCAGGAA+TGG 0.560350 3_3:-6678172 Msa0440110:CDS
TCATGGTTCACAGTTGATGT+TGG 0.560747 3_3:-6673079 Msa0440110:three_prime_UTR
TGGGAATCGATGCCCCGACT+GGG 0.560943 3_3:-6681062 Msa0440110:CDS
TTGACCGGAAGAATACAAAC+TGG 0.564865 3_3:-6681122 Msa0440110:CDS
GAATAAGTTGTTAGAGACGT+TGG 0.565230 3_3:-6682094 Msa0440110:CDS
GCAGGGATCGGTTTGCGTCA+AGG 0.565919 3_3:-6680069 Msa0440110:CDS
TCAGAAAGGTCAAGCCCAGT+CGG 0.569587 3_3:+6681048 None:intergenic
TGCACCTGAGACACGGTCAC+AGG 0.569781 3_3:+6678989 None:intergenic
CCAAGAGAGTGTTTCGCACA+GGG 0.570420 3_3:+6680518 None:intergenic
AACTTGTCATTATTGCTACA+GGG 0.570854 3_3:+6680571 None:intergenic
TGCAGAAGATGGGCAGTGGT+TGG 0.571754 3_3:-6680351 Msa0440110:CDS
CGCATGCGGCGAGCTTATCA+CGG 0.573890 3_3:+6682457 None:intergenic
TATCAAGAGAAGATGCTATG+AGG 0.574220 3_3:+6682867 None:intergenic
AGGTGAGTCTGGTGATTTCG+CGG 0.574340 3_3:+6682484 None:intergenic
ACGCAAACCGATCCCTGCTA+AGG 0.575284 3_3:+6680074 None:intergenic
AAGAATGTGAATAGTATACC+AGG 0.575840 3_3:-6678177 Msa0440110:CDS
TTGAAGTGTTTGGTAGCTGC+GGG 0.576265 3_3:-6682300 Msa0440110:CDS
AGGTGCTATAATGGTGTGGA+AGG 0.577188 3_3:-6675938 Msa0440110:intron
GCGTATTTCTACAGAACCAT+TGG 0.578585 3_3:-6682541 Msa0440110:CDS
TCGCGGCGGAAATTGAATCC+GGG 0.579207 3_3:+6682501 None:intergenic
GTGCCTGTATAACAGAAACT+GGG 0.580176 3_3:-6679020 Msa0440110:intron
CTTCTGTTGCACCTGAGACA+CGG 0.581858 3_3:+6678982 None:intergenic
TGGAAACTTGCCCATGACAA+AGG 0.584706 3_3:-6680278 Msa0440110:CDS
ATGACCACCAGGCTTGCTCA+AGG 0.585469 3_3:+6680310 None:intergenic
GATCGGTTTGCGTCAAGGAA+AGG 0.586389 3_3:-6680064 Msa0440110:intron
ATTGAGAGGAATGCAAGCAA+TGG 0.586548 3_3:-6672888 Msa0440110:three_prime_UTR
AGACGTTGGCGCAAGTTGAG+AGG 0.588652 3_3:-6682080 Msa0440110:CDS
TTGGCCTTGCAGTAATGTTG+TGG 0.589720 3_3:-6680121 Msa0440110:intron
GCACTGACAACCGGAACAAG+AGG 0.593492 3_3:+6680371 None:intergenic
CAGTTAGATCCGATTGAAGA+GGG 0.593908 3_3:-6673214 Msa0440110:CDS
CGTGTCTCAGGTGCAACAGA+AGG 0.594843 3_3:-6678981 Msa0440110:CDS
ATTAATAAGAATATAAGAAG+GGG 0.597210 3_3:+6682804 None:intergenic
GGCAGGCATTCACCAGTGCT+AGG 0.597638 3_3:+6680826 None:intergenic
CCAGTTAGATCCGATTGAAG+AGG 0.600084 3_3:-6673215 Msa0440110:CDS
TGCGGCGAGCTTATCACGGA+GGG 0.601748 3_3:+6682461 None:intergenic
ATTATGGTGAAGAAGTGAAG+TGG 0.608533 3_3:+6682713 None:intergenic
GATCCAACAAGCTCCGCAGA+TGG 0.609291 3_3:+6678204 None:intergenic
TGACCACCAGGCTTGCTCAA+GGG 0.609355 3_3:+6680311 None:intergenic
CCATACTGCATCATGGGCAA+AGG 0.609785 3_3:-6674208 Msa0440110:intron
TGTCTGGTGACTTCCCAAAG+AGG 0.610893 3_3:+6674952 None:intergenic
ATCTAGGTGCTATAATGGTG+TGG 0.612874 3_3:-6675942 Msa0440110:CDS
GAAGAGGGTATGATGGACAG+TGG 0.615392 3_3:-6673199 Msa0440110:CDS
ATGTAAATTGCAGAATGTCA+AGG 0.615849 3_3:-6674056 Msa0440110:CDS
TATGCTGGAGATGGAGTCGT+CGG 0.616495 3_3:-6682247 Msa0440110:CDS
GGACAGTGGAAGCTGGCACT+GGG 0.616854 3_3:-6673185 Msa0440110:CDS
GTTGAAGTGTTTGGTAGCTG+CGG 0.617732 3_3:-6682301 Msa0440110:CDS
GAATGTCAAGGTGTTGAACG+AGG 0.618719 3_3:-6674044 Msa0440110:CDS
GAAATGTCCAGATGGCAACT+GGG 0.618954 3_3:-6678937 Msa0440110:CDS
GTGTTCGGGAGAAACTATGC+TGG 0.625878 3_3:-6682262 Msa0440110:CDS
TAACCCTCCTGGCCTTAGCA+GGG 0.626190 3_3:-6680086 Msa0440110:CDS
GGTGGTGGTGATAATTCCAA+TGG 0.626917 3_3:+6682525 None:intergenic
TAATTTGCCAGCGTCTCTGG+TGG 0.627326 3_3:-6676019 Msa0440110:intron
ATGGAGAAGAAATGTCCAGA+TGG 0.629322 3_3:-6678945 Msa0440110:CDS
CATTTATTGTATATAATGAG+CGG 0.629480 3_3:-6675813 Msa0440110:CDS
AAAACAACCTAACGTCGCAA+AGG 0.632591 3_3:+6673002 None:intergenic
ATTTATATGCAGACACCTGA+TGG 0.632909 3_3:-6675341 Msa0440110:intron
AGAAAGGTCAAGCCCAGTCG+GGG 0.637922 3_3:+6681050 None:intergenic
GAGTGTGAATCTAGAAGTGA+AGG 0.638377 3_3:+6682657 None:intergenic
TCAGTGCAGAAGATGGGCAG+TGG 0.639174 3_3:-6680355 Msa0440110:CDS
ATGAGGATATACCGTGAAGG+AGG 0.639551 3_3:+6682884 None:intergenic
CGATCCCTGCTAAGGCCAGG+AGG 0.643069 3_3:+6680082 None:intergenic
GATCCCTGCTAAGGCCAGGA+GGG 0.648985 3_3:+6680083 None:intergenic
CTGTAGAAATACGCGCGACG+TGG 0.649285 3_3:+6682550 None:intergenic
TCTGGTAATGGAAATTCTGG+TGG 0.652606 3_3:-6682159 Msa0440110:CDS
AACCTCTATACCCCATAGAG+CGG 0.653508 3_3:+6681002 None:intergenic
ACTTGTCATTATTGCTACAG+GGG 0.655826 3_3:+6680572 None:intergenic
GGCGAGCTTATCACGGAGGG+AGG 0.660430 3_3:+6682464 None:intergenic
CACGCAGCAGACATCTGATG+TGG 0.662501 3_3:+6673104 None:intergenic
TGAAGAAGGATAAGAAATGG+TGG 0.664057 3_3:+6674988 None:intergenic
ATGTGATATAAAACTTCCCG+AGG 0.667291 3_3:-6675273 Msa0440110:intron
CTGTCTGCAGAGCCTCCCAA+AGG 0.668083 3_3:+6680865 None:intergenic
AATGTCAAGGTGTTGAACGA+GGG 0.668582 3_3:-6674043 Msa0440110:CDS
AGTCCCTTGAGCAAGCCTGG+TGG 0.680286 3_3:-6680314 Msa0440110:CDS
GTGCTGCAGATCATACTGCA+TGG 0.682152 3_3:-6673962 Msa0440110:CDS
GCATCTCAAGCCGCTCTATG+GGG 0.682344 3_3:-6681012 Msa0440110:CDS
GCTATGAGGATATACCGTGA+AGG 0.698917 3_3:+6682881 None:intergenic
CCAAAGGATAAATTTCACCC+AGG 0.700567 3_3:+6680881 None:intergenic
ACATGATGTGAAAAGGTCTG+AGG 0.709695 3_3:-6673984 Msa0440110:CDS
CGGCGGAAATTGAATCCGGG+AGG 0.717481 3_3:+6682504 None:intergenic
ATGCGGCGAGCTTATCACGG+AGG 0.723729 3_3:+6682460 None:intergenic
TGCCTGTATAACAGAAACTG+GGG 0.723775 3_3:-6679019 Msa0440110:intron
GAAAAGAAAAGAGAAAACGG+TGG 0.732329 3_3:+6682688 None:intergenic
TTGGTCGAGAGTATCGCATG+CGG 0.737318 3_3:+6682443 None:intergenic
TCAATGAAGATTGATGAGAG+TGG 0.753630 3_3:-6674236 Msa0440110:CDS
TGAGTCTGGTGATTTCGCGG+CGG 0.761726 3_3:+6682487 None:intergenic
AAAGCTTCGAATCATCAACG+CGG 0.841727 3_3:-6682421 Msa0440110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATACATAAAATACAA+TGG + chr3_3:6680406-6680425 None:intergenic 10.0%
!! ATTAATAAGAATATAAGAAG+GGG + chr3_3:6672838-6672857 None:intergenic 15.0%
!! GATTAATAAGAATATAAGAA+GGG + chr3_3:6672839-6672858 None:intergenic 15.0%
!! TGATTAATAAGAATATAAGA+AGG + chr3_3:6672840-6672859 None:intergenic 15.0%
!! TATTAATGTGTTTATAAACA+AGG + chr3_3:6673631-6673650 None:intergenic 15.0%
!!! ATTTAGATTTACTTTTTGTT+GGG + chr3_3:6674023-6674042 None:intergenic 15.0%
!!! AATTTAGATTTACTTTTTGT+TGG + chr3_3:6674024-6674043 None:intergenic 15.0%
!!! AAATCATTTTGTATGAAATT+TGG - chr3_3:6675725-6675744 Msa0440110:intron 15.0%
!!! AATCATTTTGTATGAAATTT+GGG - chr3_3:6675726-6675745 Msa0440110:intron 15.0%
!! GAAAATAATGTTATGATATT+AGG - chr3_3:6675902-6675921 Msa0440110:intron 15.0%
!! TTATCAAAAATAGAATAGAA+TGG - chr3_3:6675939-6675958 Msa0440110:CDS 15.0%
!! AGTTTAATAACATAACATAA+TGG - chr3_3:6676334-6676353 Msa0440110:intron 15.0%
!! TAAATTAAGACATTCAAATT+TGG - chr3_3:6676875-6676894 Msa0440110:intron 15.0%
!! TAATCTTATATGTTGAAAAT+GGG - chr3_3:6677224-6677243 Msa0440110:intron 15.0%
!! ATAACAATGAGAAATTTATA+GGG + chr3_3:6677559-6677578 None:intergenic 15.0%
!! AATAACAATGAGAAATTTAT+AGG + chr3_3:6677560-6677579 None:intergenic 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr3_3:6677952-6677971 Msa0440110:intron 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr3_3:6677952-6677971 Msa0440110:intron 15.0%
!!! TATGTATAAATTAATTTGGT+TGG - chr3_3:6680414-6680433 Msa0440110:intron 15.0%
!!! ATGTATAAATTAATTTGGTT+GGG - chr3_3:6680415-6680434 Msa0440110:intron 15.0%
!! ATTTAGCATGATAATTAAAT+AGG - chr3_3:6680926-6680945 Msa0440110:intron 15.0%
!!! AAATAGATTTTGTTAACTTA+TGG - chr3_3:6681284-6681303 Msa0440110:intron 15.0%
!!! TTTAAAATATTTTTTACCGA+AGG + chr3_3:6681528-6681547 None:intergenic 15.0%
!! TTAGTAGTAGAAATTATTAT+AGG + chr3_3:6682592-6682611 None:intergenic 15.0%
!! ATTTCCTGTAATTATATTAT+TGG - chr3_3:6682700-6682719 Msa0440110:CDS 15.0%
!! TTTCCTGTAATTATATTATT+GGG - chr3_3:6682701-6682720 Msa0440110:CDS 15.0%
!!! TGTACTTTTATAGTTATGTT+CGG + chr3_3:6673687-6673706 None:intergenic 20.0%
!!! TTTAGATTTACTTTTTGTTG+GGG + chr3_3:6674022-6674041 None:intergenic 20.0%
!!! ATTTGAGTTTATTTTTTGTC+AGG - chr3_3:6674140-6674159 Msa0440110:intron 20.0%
!!! TTTGAGTTTATTTTTTGTCA+GGG - chr3_3:6674141-6674160 Msa0440110:intron 20.0%
!! TATATATTACTTCAACTTCA+CGG - chr3_3:6674372-6674391 Msa0440110:intron 20.0%
!! AAGAACTCTAATATTATCTT+TGG - chr3_3:6675842-6675861 Msa0440110:intron 20.0%
!! TAATATTATCTTTGGACTAA+AGG - chr3_3:6675850-6675869 Msa0440110:intron 20.0%
!!! TAAAAAATTTGGAACTAACA+TGG - chr3_3:6676277-6676296 Msa0440110:intron 20.0%
!!! TATTTTTTCATTCTATCCAA+TGG - chr3_3:6676435-6676454 Msa0440110:intron 20.0%
!!! CGTTTTTATTAGGATATATT+GGG + chr3_3:6676520-6676539 Msa0440120:CDS 20.0%
!!! TCGTTTTTATTAGGATATAT+TGG + chr3_3:6676521-6676540 Msa0440120:CDS 20.0%
!!! AATTTAGTTTAGATGATGAA+AGG + chr3_3:6676861-6676880 Msa0440120:CDS 20.0%
!!! TAAGTTATTAACACATGTTT+TGG + chr3_3:6677016-6677035 Msa0440120:CDS 20.0%
!! TCATACATCTTATTAACAAT+TGG - chr3_3:6677048-6677067 Msa0440110:intron 20.0%
!! CTAATCTTATATGTTGAAAA+TGG - chr3_3:6677223-6677242 Msa0440110:intron 20.0%
!! AATCTTATATGTTGAAAATG+GGG - chr3_3:6677225-6677244 Msa0440110:intron 20.0%
!! AAATTAGAAAGGCTAAAATA+CGG + chr3_3:6677325-6677344 Msa0440120:CDS 20.0%
!!! GTAGAAATAAAGTTGATATT+TGG + chr3_3:6677359-6677378 None:intergenic 20.0%
!! ATAAATTATGTAGATCAGTT+TGG - chr3_3:6677510-6677529 Msa0440110:intron 20.0%
!! TGTTATTATATCTACTTTCT+TGG - chr3_3:6677573-6677592 Msa0440110:intron 20.0%
!!! CTTGGTTTTATTGATTAAAT+TGG - chr3_3:6677591-6677610 Msa0440110:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr3_3:6677959-6677978 Msa0440110:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr3_3:6677960-6677979 Msa0440110:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr3_3:6677982-6678001 Msa0440110:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr3_3:6677959-6677978 Msa0440110:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr3_3:6677960-6677979 Msa0440110:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr3_3:6677982-6678001 Msa0440110:intron 20.0%
!! ATTTCAATTCATATTCATCT+AGG - chr3_3:6679681-6679700 Msa0440110:intron 20.0%
!! TGCTCATAAATATATAACAA+GGG + chr3_3:6679793-6679812 None:intergenic 20.0%
!! CATTTATTGTATATAATGAG+CGG - chr3_3:6679826-6679845 Msa0440110:intron 20.0%
!!! TAAAGTATCTTTTTTATGTC+TGG - chr3_3:6679930-6679949 Msa0440110:intron 20.0%
!!! AAAGTATCTTTTTTATGTCT+GGG - chr3_3:6679931-6679950 Msa0440110:intron 20.0%
!!! TAGATGTTGTTTGAATTATT+AGG - chr3_3:6680175-6680194 Msa0440110:intron 20.0%
!!! ATAAATTGCAAGTTTTATCT+AGG + chr3_3:6680228-6680247 None:intergenic 20.0%
!!! TATCCTTTTTTTTTTTGCAA+AGG + chr3_3:6680543-6680562 None:intergenic 20.0%
!!! ATGTAATATTACTTTTTGTC+TGG + chr3_3:6680706-6680725 None:intergenic 20.0%
!! TTCTGTCTTTATAAAACATT+TGG - chr3_3:6680809-6680828 Msa0440110:CDS 20.0%
!!! CTTACAGGTTAATTTTATTT+CGG - chr3_3:6681730-6681749 Msa0440110:intron 20.0%
!!! ATTTGCTAGTAATTGATATA+TGG - chr3_3:6681868-6681887 Msa0440110:intron 20.0%
!!! CAAGTTATTTTTGTAATACT+TGG - chr3_3:6682326-6682345 Msa0440110:CDS 20.0%
!! ACTAATATTGTAAAATTGAG+AGG - chr3_3:6682737-6682756 Msa0440110:exon 20.0%
! AACGAAAAGAAAAGAGAAAA+CGG + chr3_3:6672957-6672976 None:intergenic 25.0%
!!! TTTGTTTTTGTTGAAGTGTT+TGG - chr3_3:6673329-6673348 Msa0440110:intron 25.0%
! TTACCACAATTTAAAAACCT+TGG + chr3_3:6673764-6673783 None:intergenic 25.0%
!! AGGTTTTTAAATTGTGGTAA+TGG - chr3_3:6673764-6673783 Msa0440110:intron 25.0%
!!! TTTTAAATTGTGGTAATGGT+TGG - chr3_3:6673768-6673787 Msa0440110:intron 25.0%
! ACCTTTATGTAAAACAGATT+GGG - chr3_3:6673878-6673897 Msa0440110:intron 25.0%
!! AGTCCATGAAATTTTCATAT+AGG - chr3_3:6674044-6674063 Msa0440110:CDS 25.0%
!! GTCCATGAAATTTTCATATA+GGG - chr3_3:6674045-6674064 Msa0440110:CDS 25.0%
!! TCCATGAAATTTTCATATAG+GGG - chr3_3:6674046-6674065 Msa0440110:CDS 25.0%
! CCTTACATTATTTCATATTG+GGG + chr3_3:6674115-6674134 None:intergenic 25.0%
! CCCTTACATTATTTCATATT+GGG + chr3_3:6674116-6674135 None:intergenic 25.0%
! CCCAATATGAAATAATGTAA+GGG - chr3_3:6674113-6674132 Msa0440110:intron 25.0%
! TCCCTTACATTATTTCATAT+TGG + chr3_3:6674117-6674136 None:intergenic 25.0%
!!! ATTAGAATAGTTAGTTTGCA+AGG - chr3_3:6674249-6674268 Msa0440110:CDS 25.0%
!!! TTAGAATAGTTAGTTTGCAA+GGG - chr3_3:6674250-6674269 Msa0440110:CDS 25.0%
!! TTCTTGTACTTCAAGTTATA+TGG - chr3_3:6675030-6675049 Msa0440110:intron 25.0%
!!! TATACAATTGCTTTTCAGAA+GGG - chr3_3:6675197-6675216 Msa0440110:intron 25.0%
! CAATTCACAAATTAGATCTT+TGG + chr3_3:6675244-6675263 None:intergenic 25.0%
!! CAAAGATCTAATTTGTGAAT+TGG - chr3_3:6675242-6675261 Msa0440110:intron 25.0%
!!! ACTTGTTTTTACAAATCTGT+TGG - chr3_3:6675499-6675518 Msa0440110:intron 25.0%
! AGCATGAGAAAGTAATAATT+AGG + chr3_3:6675820-6675839 None:intergenic 25.0%
! AAATAGAATAGAATGGAACT+TGG - chr3_3:6675946-6675965 Msa0440110:CDS 25.0%
! TAATTACGAAAAAATCGCTT+TGG - chr3_3:6676224-6676243 Msa0440110:intron 25.0%
!!! TTGCATCATTCGTTTTTATT+AGG + chr3_3:6676530-6676549 Msa0440120:CDS 25.0%
! GAAATATTGAAATCATGTAC+AGG + chr3_3:6676813-6676832 Msa0440120:CDS 25.0%
! TACTGTATTCTTAATATCGA+AGG + chr3_3:6676992-6677011 Msa0440120:CDS 25.0%
! ATTGTTAATTATCCTGATCT+AGG + chr3_3:6677131-6677150 Msa0440120:CDS 25.0%
! AGATCAGGATAATTAACAAT+TGG - chr3_3:6677131-6677150 Msa0440110:intron 25.0%
!!! GTATTTTAGCCTTTCTAATT+TGG - chr3_3:6677324-6677343 Msa0440110:intron 25.0%
! ATTATGTAGCCAAATTAGAA+AGG + chr3_3:6677336-6677355 None:intergenic 25.0%
! TATAAGATGTTTGTATTAGC+TGG + chr3_3:6677405-6677424 None:intergenic 25.0%
! TAACCATTAAAGAGAATGTA+AGG + chr3_3:6677812-6677831 None:intergenic 25.0%
! GATTATAAATAAAGATGCAG+AGG + chr3_3:6678136-6678155 None:intergenic 25.0%
!!! TCTGTTTTGAGTAGTATTTT+TGG - chr3_3:6678416-6678435 Msa0440110:intron 25.0%
! GAGAAATTTCAGATATAGAA+GGG + chr3_3:6678683-6678702 None:intergenic 25.0%
! AGAGAAATTTCAGATATAGA+AGG + chr3_3:6678684-6678703 None:intergenic 25.0%
! ATGAAGGAAAAAGAAATGAA+GGG + chr3_3:6678746-6678765 None:intergenic 25.0%
! AATGAAGGAAAAAGAAATGA+AGG + chr3_3:6678747-6678766 None:intergenic 25.0%
! AAAATTCAGTCAGAAAATGA+AGG + chr3_3:6678762-6678781 None:intergenic 25.0%
! GATTATAAATAAAGATGCAG+AGG + chr3_3:6678136-6678155 None:intergenic 25.0%
! AAAAGGTAACTGTTAGATAT+AGG + chr3_3:6679546-6679565 None:intergenic 25.0%
! GGCAAATTAAAAAGCAAAAA+GGG + chr3_3:6679609-6679628 None:intergenic 25.0%
! TGGCAAATTAAAAAGCAAAA+AGG + chr3_3:6679610-6679629 None:intergenic 25.0%
! CTGCTCATAAATATATAACA+AGG + chr3_3:6679794-6679813 None:intergenic 25.0%
!! TTTAGAACCATGTTTAAAGT+TGG - chr3_3:6680142-6680161 Msa0440110:intron 25.0%
! TTTATCTAGGCAAATATTTG+AGG + chr3_3:6680215-6680234 None:intergenic 25.0%
! CTGAATATCATACTGTAATA+TGG + chr3_3:6680448-6680467 None:intergenic 25.0%
! AATGCATACAAGTTTCTAAA+AGG - chr3_3:6680506-6680525 Msa0440110:CDS 25.0%
! CATCCTTTGCAAAAAAAAAA+AGG - chr3_3:6680537-6680556 Msa0440110:CDS 25.0%
! CTAAATACAACATCATTAAC+GGG + chr3_3:6680912-6680931 None:intergenic 25.0%
! GCTAAATACAACATCATTAA+CGG + chr3_3:6680913-6680932 None:intergenic 25.0%
! AATTAAATAGGTTGTGTTTC+TGG - chr3_3:6680938-6680957 Msa0440110:intron 25.0%
!! GTTAATGCTATATTGCTATT+TGG - chr3_3:6681073-6681092 Msa0440110:CDS 25.0%
! ATAATAGCCGAAAATGTTAT+GGG - chr3_3:6681379-6681398 Msa0440110:intron 25.0%
!!! ACAACTCTTTTTGATAACTT+GGG + chr3_3:6681832-6681851 None:intergenic 25.0%
!! TTGGAGAAGATAATATGTTT+TGG + chr3_3:6681912-6681931 None:intergenic 25.0%
!!! GCTAAAAGGTAATGTTTTTT+TGG + chr3_3:6681931-6681950 None:intergenic 25.0%
! TTAGAAAATTAAGTGTTCCA+TGG + chr3_3:6681953-6681972 None:intergenic 25.0%
!! ATAGTGAGTTTTTATGAACT+AGG + chr3_3:6681998-6682017 None:intergenic 25.0%
!! GCTTTTCAATATTCTTATAC+AGG + chr3_3:6682067-6682086 None:intergenic 25.0%
! AACAGTGATTCATGTTAAAT+CGG + chr3_3:6682381-6682400 None:intergenic 25.0%
! ATTTCTACTACTAAAATGAC+AGG - chr3_3:6682598-6682617 Msa0440110:CDS 25.0%
! ATTACAGGAAATGAAAAACT+CGG + chr3_3:6682692-6682711 None:intergenic 25.0%
! CAACCCAATAATATAATTAC+AGG + chr3_3:6682707-6682726 None:intergenic 25.0%
! CAAGTCTCTTTCATTATTAA+GGG - chr3_3:6682791-6682810 Msa0440110:five_prime_UTR 25.0%
!! AATGATTTTGAGAAAGAGAG+AGG + chr3_3:6673018-6673037 None:intergenic 30.0%
TTAGTTCCACTCCAATTATA+TGG - chr3_3:6673735-6673754 Msa0440110:intron 30.0%
TAGTTCCACTCCAATTATAT+GGG - chr3_3:6673736-6673755 Msa0440110:intron 30.0%
! GAACCAAGGTTTTTAAATTG+TGG - chr3_3:6673758-6673777 Msa0440110:intron 30.0%
GACCTTTATGTAAAACAGAT+TGG - chr3_3:6673877-6673896 Msa0440110:intron 30.0%
! TCCCAATCTGTTTTACATAA+AGG + chr3_3:6673882-6673901 None:intergenic 30.0%
ACCCCTATATGAAAATTTCA+TGG + chr3_3:6674050-6674069 None:intergenic 30.0%
TCACTCTGATATAATGTGTT+TGG - chr3_3:6674078-6674097 Msa0440110:intron 30.0%
CACTCTGATATAATGTGTTT+GGG - chr3_3:6674079-6674098 Msa0440110:intron 30.0%
ACTCTGATATAATGTGTTTG+GGG - chr3_3:6674080-6674099 Msa0440110:intron 30.0%
CCCCAATATGAAATAATGTA+AGG - chr3_3:6674112-6674131 Msa0440110:intron 30.0%
! ATATCTGAGCTTTTGTCATT+CGG - chr3_3:6674345-6674364 Msa0440110:intron 30.0%
ATGTTGCAGTTATCAGATTA+TGG - chr3_3:6674467-6674486 Msa0440110:intron 30.0%
GTTGTTATAATTGCATTACC+TGG - chr3_3:6674657-6674676 Msa0440110:intron 30.0%
TACATATGCTTCATACATAC+AGG - chr3_3:6674699-6674718 Msa0440110:intron 30.0%
ACATATGCTTCATACATACA+GGG - chr3_3:6674700-6674719 Msa0440110:intron 30.0%
TAATAAGATCTTGTCCTTCT+AGG - chr3_3:6674725-6674744 Msa0440110:intron 30.0%
AATAAGATCTTGTCCTTCTA+GGG - chr3_3:6674726-6674745 Msa0440110:intron 30.0%
AACTTGTCATTATTGCTACA+GGG + chr3_3:6675071-6675090 None:intergenic 30.0%
ATAAAACCTGCTCAAAAAGT+TGG + chr3_3:6675170-6675189 None:intergenic 30.0%
!! CTATACAATTGCTTTTCAGA+AGG - chr3_3:6675196-6675215 Msa0440110:intron 30.0%
!!! TTCAAATGGCTTTTTTGTCA+AGG - chr3_3:6675388-6675407 Msa0440110:intron 30.0%
!!! CTTTTTTGTCAAGGAAGAAA+AGG - chr3_3:6675397-6675416 Msa0440110:intron 30.0%
ACTTGAGATATCAATAACGA+CGG + chr3_3:6675446-6675465 None:intergenic 30.0%
ATTCCTTCTTAAAGTTGACA+GGG - chr3_3:6675630-6675649 Msa0440110:intron 30.0%
CATGGAAATCATGCATTTAA+AGG + chr3_3:6675787-6675806 None:intergenic 30.0%
TTAAATGCATGATTTCCATG+TGG - chr3_3:6675787-6675806 Msa0440110:CDS 30.0%
TAATTAGGTATAATGCCACA+TGG + chr3_3:6675805-6675824 None:intergenic 30.0%
TTTGGACTAAAGGAAAGAAA+TGG - chr3_3:6675860-6675879 Msa0440110:intron 30.0%
AAAGTTGAAGTTGTCAAACT+GGG - chr3_3:6675997-6676016 Msa0440110:CDS 30.0%
AAAGATAGCAAATTGATCCA+GGG + chr3_3:6676080-6676099 None:intergenic 30.0%
TAATGAAGTAATCAAGCCAT+TGG + chr3_3:6676454-6676473 None:intergenic 30.0%
AGAAGGAATTAATGTACTGA+TGG - chr3_3:6676675-6676694 Msa0440110:intron 30.0%
! AGGAAAATCATGTACCTTTT+TGG + chr3_3:6676793-6676812 Msa0440120:CDS 30.0%
TTGCACTGCTTCAAATTATT+TGG - chr3_3:6676918-6676937 Msa0440110:intron 30.0%
TTTATACGTGTCTCACTATA+AGG + chr3_3:6676963-6676982 Msa0440120:CDS 30.0%
!!! GAGTTATTTTTGTTTGCTCA+AGG - chr3_3:6677247-6677266 Msa0440110:intron 30.0%
!! TATTTTTGTTTGCTCAAGGT+TGG - chr3_3:6677251-6677270 Msa0440110:intron 30.0%
ATTTCTACAATCAAGTTTGC+AGG - chr3_3:6677371-6677390 Msa0440110:intron 30.0%
!! ATATGTTGATTTACCATCTG+CGG - chr3_3:6677422-6677441 Msa0440110:intron 30.0%
AAGAATGTGAATAGTATACC+AGG - chr3_3:6677462-6677481 Msa0440110:intron 30.0%
TTTGTATTTAACACCATTCC+TGG + chr3_3:6677483-6677502 None:intergenic 30.0%
AACCACAAGCTGAAATTAAT+GGG - chr3_3:6677755-6677774 Msa0440110:intron 30.0%
! TTATATTTCTAAGCCAGGAA+AGG + chr3_3:6677784-6677803 None:intergenic 30.0%
! ATGGTTTATATTTCTAAGCC+AGG + chr3_3:6677789-6677808 None:intergenic 30.0%
CATTAAAGAGAATGTAAGGA+TGG + chr3_3:6677808-6677827 None:intergenic 30.0%
CATCCTTACATTCTCTTTAA+TGG - chr3_3:6677806-6677825 Msa0440110:intron 30.0%
CTATTCTGTTCATTACTTAG+TGG - chr3_3:6677836-6677855 Msa0440110:intron 30.0%
TCTAAGTAACTGTTAGATAC+TGG - chr3_3:6677916-6677935 Msa0440110:intron 30.0%
! AGATTGGGTATTTTGTATGT+GGG + chr3_3:6678103-6678122 None:intergenic 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr3_3:6678129-6678148 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr3_3:6678130-6678149 None:intergenic 30.0%
ATTCTATAACTTATGCCCTT+AGG - chr3_3:6678245-6678264 Msa0440110:CDS 30.0%
AGATATAGAAGGGAAAATGA+TGG + chr3_3:6678673-6678692 None:intergenic 30.0%
GTTCATTTGATGTTCAACAA+GGG + chr3_3:6678833-6678852 None:intergenic 30.0%
ATAAGAAAGTAACTGCAGAA+AGG - chr3_3:6678032-6678051 Msa0440110:intron 30.0%
! AGATTGGGTATTTTGTATGT+GGG + chr3_3:6678103-6678122 None:intergenic 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr3_3:6678129-6678148 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr3_3:6678130-6678149 None:intergenic 30.0%
ATTCTATAACTTATGCCCTT+AGG - chr3_3:6678245-6678264 Msa0440110:CDS 30.0%
TGTGTTAACATTTCATTCAC+GGG + chr3_3:6679569-6679588 None:intergenic 30.0%
GTGTGTTAACATTTCATTCA+CGG + chr3_3:6679570-6679589 None:intergenic 30.0%
! TATTCATCTAGGTGCTATAA+TGG - chr3_3:6679692-6679711 Msa0440110:intron 30.0%
!!! TCTTTTTTTCTTAGCAGATG+AGG + chr3_3:6679862-6679881 None:intergenic 30.0%
GCTAAGAAAAAAAGAAGACA+TGG - chr3_3:6679867-6679886 Msa0440110:intron 30.0%
TATGATTAGTAAGTCAAACC+TGG + chr3_3:6679908-6679927 None:intergenic 30.0%
TTAAAATCGAATCAACGTGA+TGG + chr3_3:6679985-6680004 None:intergenic 30.0%
! AGATGAGATATAAGAGTACA+AGG + chr3_3:6680020-6680039 None:intergenic 30.0%
AATTCAAACAACATCTAGTG+CGG + chr3_3:6680172-6680191 None:intergenic 30.0%
! TTTATGTCATGTTTTCTCTC+TGG - chr3_3:6680590-6680609 Msa0440110:CDS 30.0%
AATCTGATTCCCACAATATT+TGG - chr3_3:6681037-6681056 Msa0440110:CDS 30.0%
GGACTAAATCCAAATATTGT+GGG + chr3_3:6681049-6681068 None:intergenic 30.0%
AGGACTAAATCCAAATATTG+TGG + chr3_3:6681050-6681069 None:intergenic 30.0%
AGCAATATAGCATTAACGAA+AGG + chr3_3:6681070-6681089 None:intergenic 30.0%
!! GTGATCTTTGTTTCTATACA+TGG + chr3_3:6681148-6681167 None:intergenic 30.0%
CATAATAGCCGAAAATGTTA+TGG - chr3_3:6681378-6681397 Msa0440110:intron 30.0%
ACAGCACTTCTTATTGATAT+AGG + chr3_3:6681467-6681486 None:intergenic 30.0%
!!! ATATTTTTTACCGAAGGCTA+GGG + chr3_3:6681522-6681541 None:intergenic 30.0%
!!! AATATTTTTTACCGAAGGCT+AGG + chr3_3:6681523-6681542 None:intergenic 30.0%
ATGTAAATTGCAGAATGTCA+AGG - chr3_3:6681583-6681602 Msa0440110:intron 30.0%
ATTGGAAACATGATGTGAAA+AGG - chr3_3:6681648-6681667 Msa0440110:intron 30.0%
!! GACAACTCTTTTTGATAACT+TGG + chr3_3:6681833-6681852 None:intergenic 30.0%
CAATTACTAGCAAATCTGTA+TGG + chr3_3:6681863-6681882 None:intergenic 30.0%
TATGGATATGCATAGTAAGA+TGG - chr3_3:6681886-6681905 Msa0440110:intron 30.0%
! AAAACATTACCTTTTAGCCA+TGG - chr3_3:6681933-6681952 Msa0440110:intron 30.0%
! TGAGTTTTTATGAACTAGGA+GGG + chr3_3:6681994-6682013 None:intergenic 30.0%
ATATTCTTATACAGGTGAGT+AGG + chr3_3:6682059-6682078 None:intergenic 30.0%
!! TAAGCGTTTTTGTTATGAGA+CGG + chr3_3:6682092-6682111 None:intergenic 30.0%
!!! TATTGTCATTTTACCGATAC+AGG - chr3_3:6682207-6682226 Msa0440110:CDS 30.0%
!!! ATTGTCATTTTACCGATACA+GGG - chr3_3:6682208-6682227 Msa0440110:CDS 30.0%
AATACATGATTTCCCTGTAT+CGG + chr3_3:6682223-6682242 None:intergenic 30.0%
ATCTTCAATTTGTATCCATC+TGG + chr3_3:6682253-6682272 None:intergenic 30.0%
TAACGATCATGATAAAGCAA+CGG + chr3_3:6682302-6682321 None:intergenic 30.0%
ATCACTGTTTGCATTAATTC+AGG - chr3_3:6682392-6682411 Msa0440110:CDS 30.0%
GCAAGTCTCTTTCATTATTA+AGG - chr3_3:6682790-6682809 Msa0440110:five_prime_UTR 30.0%
ACGAACTTGTGAATATTTGA+TGG + chr3_3:6682834-6682853 None:intergenic 30.0%
TATCAAGAGAAGATGCTATG+AGG + chr3_3:6672775-6672794 None:intergenic 35.0%
ATTATGGTGAAGAAGTGAAG+TGG + chr3_3:6672929-6672948 None:intergenic 35.0%
GAAAAGAAAAGAGAAAACGG+TGG + chr3_3:6672954-6672973 None:intergenic 35.0%
GAAGAAGAAGAAGATGAAGA+TGG + chr3_3:6673048-6673067 None:intergenic 35.0%
! ATGATTGAGAAGATGGATTC+TGG - chr3_3:6673462-6673481 Msa0440110:intron 35.0%
!! GATTCTGGTAATGGAAATTC+TGG - chr3_3:6673477-6673496 Msa0440110:intron 35.0%
GTTTGGAGGATCATGAAATT+CGG - chr3_3:6673517-6673536 Msa0440110:intron 35.0%
TTTGGAGGATCATGAAATTC+GGG - chr3_3:6673518-6673537 Msa0440110:intron 35.0%
GAATAAGTTGTTAGAGACGT+TGG - chr3_3:6673545-6673564 Msa0440110:intron 35.0%
ATTGCATTGGAGGAGTAATT+GGG - chr3_3:6673589-6673608 Msa0440110:intron 35.0%
AACCTTGGTTCCCATATAAT+TGG + chr3_3:6673749-6673768 None:intergenic 35.0%
TTGGTTTCTAAACCCAATTC+AGG + chr3_3:6673906-6673925 None:intergenic 35.0%
TTAGAAACCAATCCCAATAG+TGG - chr3_3:6673915-6673934 Msa0440110:intron 35.0%
! TTTTTGTTGGGGACTAGATT+AGG + chr3_3:6674011-6674030 None:intergenic 35.0%
!!! TTTTTTGTCAGGGTCTGAAA+TGG - chr3_3:6674151-6674170 Msa0440110:intron 35.0%
!! TTTTTGTCAGGGTCTGAAAT+GGG - chr3_3:6674152-6674171 Msa0440110:intron 35.0%
TTCGAATGACACATAACAGT+GGG + chr3_3:6674307-6674326 None:intergenic 35.0%
CAGTTATCAGATTATGGTTC+TGG - chr3_3:6674473-6674492 Msa0440110:intron 35.0%
GGAACTTATTGTCCAACAAT+TGG - chr3_3:6674494-6674513 Msa0440110:intron 35.0%
! AGTGAAAGAAGGCCAAATTT+TGG - chr3_3:6674557-6674576 Msa0440110:intron 35.0%
! GTGAAAGAAGGCCAAATTTT+GGG - chr3_3:6674558-6674577 Msa0440110:intron 35.0%
! GCTTGACCTTTCTGAAAATA+CGG - chr3_3:6674599-6674618 Msa0440110:intron 35.0%
! CATACTCCGTATTTTCAGAA+AGG + chr3_3:6674608-6674627 None:intergenic 35.0%
CTAAATGCAGATTATGAACC+AGG + chr3_3:6674678-6674697 None:intergenic 35.0%
CTGGGTGAAATTTATCCTTT+GGG - chr3_3:6674759-6674778 Msa0440110:intron 35.0%
! AGGTCTTATAAGAGATCTTC+AGG - chr3_3:6674875-6674894 Msa0440110:intron 35.0%
!! AAGAATTCTCTAGCCTTGAA+AGG + chr3_3:6675015-6675034 None:intergenic 35.0%
ACTTGTCATTATTGCTACAG+GGG + chr3_3:6675070-6675089 None:intergenic 35.0%
GAACTTGTCATTATTGCTAC+AGG + chr3_3:6675072-6675091 None:intergenic 35.0%
!! AACTTTCCAACTTTTTGAGC+AGG - chr3_3:6675161-6675180 Msa0440110:intron 35.0%
TTTGAAGATGCCTTTGTCAT+GGG + chr3_3:6675374-6675393 None:intergenic 35.0%
ATTTGAAGATGCCTTTGTCA+TGG + chr3_3:6675375-6675394 None:intergenic 35.0%
!! ATGACAAAGGCATCTTCAAA+TGG - chr3_3:6675374-6675393 Msa0440110:intron 35.0%
! CTGTCAACTTTAAGAAGGAA+TGG + chr3_3:6675631-6675650 None:intergenic 35.0%
CATTCCTTCTTAAAGTTGAC+AGG - chr3_3:6675629-6675648 Msa0440110:intron 35.0%
AGGAAAGAAATGGAATGATG+TGG - chr3_3:6675870-6675889 Msa0440110:intron 35.0%
GGAAAGAAATGGAATGATGT+GGG - chr3_3:6675871-6675890 Msa0440110:intron 35.0%
GAAAGAAATGGAATGATGTG+GGG - chr3_3:6675872-6675891 Msa0440110:intron 35.0%
TGATATTAGGTTTCACTGTC+TGG - chr3_3:6675915-6675934 Msa0440110:intron 35.0%
TAGAATGGAACTTGGACTTA+TGG - chr3_3:6675954-6675973 Msa0440110:CDS 35.0%
GAAAGTTGAAGTTGTCAAAC+TGG - chr3_3:6675996-6676015 Msa0440110:CDS 35.0%
CAAAGATAGCAAATTGATCC+AGG + chr3_3:6676081-6676100 None:intergenic 35.0%
AAATTTCCATTTAGTCCAGC+AGG - chr3_3:6676105-6676124 Msa0440110:intron 35.0%
AATATGCTGCTCTCACAATT+AGG + chr3_3:6676146-6676165 None:intergenic 35.0%
ACTCGATGTAATCATCAACT+TGG + chr3_3:6676317-6676336 None:intergenic 35.0%
CATAGAGTGTAATGCAACAT+AGG + chr3_3:6676491-6676510 None:intergenic 35.0%
TACACTGAATTCGACAAGTT+TGG - chr3_3:6676748-6676767 Msa0440110:intron 35.0%
ACACTGAATTCGACAAGTTT+GGG - chr3_3:6676749-6676768 Msa0440110:intron 35.0%
! GACAAGTTTGGGATTACTAA+TGG - chr3_3:6676760-6676779 Msa0440110:intron 35.0%
! CTAATGGATCTCTTCCAAAA+AGG - chr3_3:6676776-6676795 Msa0440110:intron 35.0%
TCAATATTTCATCCATCTCG+TGG - chr3_3:6676823-6676842 Msa0440110:intron 35.0%
ATAGGCAATTCAACCATCTT+TGG + chr3_3:6677179-6677198 Msa0440120:CDS 35.0%
TGCAAACAAAAGATCCAGAT+AGG + chr3_3:6677197-6677216 Msa0440120:CDS 35.0%
!! GTTGGTGTTAGTTTGTTTCA+TGG - chr3_3:6677269-6677288 Msa0440110:intron 35.0%
!! GTTAGTTTGTTTCATGGTGA+AGG - chr3_3:6677275-6677294 Msa0440110:intron 35.0%
TGTGAATAGTATACCAGGAA+TGG - chr3_3:6677467-6677486 Msa0440110:intron 35.0%
ATCAGTTTGGAAGACATTGT+AGG - chr3_3:6677523-6677542 Msa0440110:intron 35.0%
CAACCACAAGCTGAAATTAA+TGG - chr3_3:6677754-6677773 Msa0440110:intron 35.0%
AACCCATTAATTTCAGCTTG+TGG + chr3_3:6677760-6677779 None:intergenic 35.0%
!! AATTAATGGGTTTCCTTTCC+TGG - chr3_3:6677768-6677787 Msa0440110:intron 35.0%
GTTCATTACTTAGTGGTGTT+TGG - chr3_3:6677843-6677862 Msa0440110:intron 35.0%
TTACTTAGTGGTGTTTGGTA+AGG - chr3_3:6677848-6677867 Msa0440110:intron 35.0%
TACTTAGTGGTGTTTGGTAA+GGG - chr3_3:6677849-6677868 Msa0440110:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+AGG + chr3_3:6678093-6678112 None:intergenic 35.0%
! GAGATTGGGTATTTTGTATG+TGG + chr3_3:6678104-6678123 None:intergenic 35.0%
TGTAACTGCTATAGTGAGTT+AGG + chr3_3:6678158-6678177 None:intergenic 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr3_3:6678263-6678282 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr3_3:6678264-6678283 None:intergenic 35.0%
!! AGGGGAGTATTGTTAGATAT+AGG + chr3_3:6678274-6678293 None:intergenic 35.0%
TTATGTTATCCTTCACCTTG+AGG + chr3_3:6678315-6678334 None:intergenic 35.0%
! GTCACTCTACTTCAAGTTAT+GGG + chr3_3:6678352-6678371 None:intergenic 35.0%
! TGTCACTCTACTTCAAGTTA+TGG + chr3_3:6678353-6678372 None:intergenic 35.0%
! AATGTCGTTTGATGGAGAAA+AGG + chr3_3:6678470-6678489 None:intergenic 35.0%
! TTTTCTCCATCAAACGACAT+TGG - chr3_3:6678469-6678488 Msa0440110:intron 35.0%
GAAAAACGTTCTGATTGAGT+TGG + chr3_3:6678799-6678818 None:intergenic 35.0%
GGTTCATTTGATGTTCAACA+AGG + chr3_3:6678834-6678853 None:intergenic 35.0%
TATTCAATCGAAGTCGTTGA+CGG + chr3_3:6678862-6678881 None:intergenic 35.0%
TCCTCTTCTTCATCATGTAT+AGG - chr3_3:6678888-6678907 Msa0440110:CDS 35.0%
! TGGTTTAAAACGCCACAAAA+AGG - chr3_3:6678929-6678948 Msa0440110:CDS 35.0%
ATTTCTGCCATAACATACCA+CGG - chr3_3:6679149-6679168 Msa0440110:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG + chr3_3:6678093-6678112 None:intergenic 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG + chr3_3:6678094-6678113 None:intergenic 35.0%
! GAGATTGGGTATTTTGTATG+TGG + chr3_3:6678104-6678123 None:intergenic 35.0%
TGTAACTGCTATAGTGAGTT+AGG + chr3_3:6678158-6678177 None:intergenic 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr3_3:6678263-6678282 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr3_3:6678264-6678283 None:intergenic 35.0%
AACATTTCATTCACGGGAAA+AGG + chr3_3:6679563-6679582 None:intergenic 35.0%
CAAGATCACTCAAATGTGAA+AGG + chr3_3:6679764-6679783 None:intergenic 35.0%
TTGTATATAATGAGCGGAGA+AGG - chr3_3:6679832-6679851 Msa0440110:intron 35.0%
TGTATATAATGAGCGGAGAA+GGG - chr3_3:6679833-6679852 Msa0440110:intron 35.0%
!! CTTTTTAGCCTCTTTTTCTG+AGG - chr3_3:6680038-6680057 Msa0440110:intron 35.0%
!! TAGTTATTTTCCAGCATACC+TGG - chr3_3:6680068-6680087 Msa0440110:CDS 35.0%
TATCTTGAATGTGTCAGTGA+CGG - chr3_3:6680247-6680266 Msa0440110:CDS 35.0%
ATCAGGTGTCTGCATATAAA+TGG + chr3_3:6680299-6680318 None:intergenic 35.0%
ATTTATATGCAGACACCTGA+TGG - chr3_3:6680298-6680317 Msa0440110:CDS 35.0%
!! TCGGGAAGTTTTATATCACA+TGG + chr3_3:6680367-6680386 None:intergenic 35.0%
ATGTGATATAAAACTTCCCG+AGG - chr3_3:6680366-6680385 Msa0440110:CDS 35.0%
! GCATACAAGTTTCTAAAAGG+TGG - chr3_3:6680509-6680528 Msa0440110:CDS 35.0%
GATGAGAACTACGTTTATTC+AGG - chr3_3:6680627-6680646 Msa0440110:intron 35.0%
TGAAGAAGGATAAGAAATGG+TGG + chr3_3:6680654-6680673 None:intergenic 35.0%
GGATGAAGAAGGATAAGAAA+TGG + chr3_3:6680657-6680676 None:intergenic 35.0%
TCGTTTAATGTACATGTCAG+GGG + chr3_3:6680871-6680890 None:intergenic 35.0%
CTCGTTTAATGTACATGTCA+GGG + chr3_3:6680872-6680891 None:intergenic 35.0%
!! TCTTTGCTGTGACAGTTTTA+CGG - chr3_3:6681182-6681201 Msa0440110:intron 35.0%
!! CTTATGGCATTGAGTTGATA+AGG - chr3_3:6681300-6681319 Msa0440110:intron 35.0%
!! GCATTGAGTTGATAAGGTAA+CGG - chr3_3:6681306-6681325 Msa0440110:intron 35.0%
!! CATTGAGTTGATAAGGTAAC+GGG - chr3_3:6681307-6681326 Msa0440110:intron 35.0%
TTCCATTGACCTGGAATAAA+GGG + chr3_3:6681351-6681370 None:intergenic 35.0%
! CATTGAGCCCATAACATTTT+CGG + chr3_3:6681389-6681408 None:intergenic 35.0%
TCAATGAAGATTGATGAGAG+TGG - chr3_3:6681403-6681422 Msa0440110:intron 35.0%
TCTTATTGATATAGGCAGCA+CGG + chr3_3:6681459-6681478 None:intergenic 35.0%
AGGCAAGATCAATGTAATAC+AGG + chr3_3:6681493-6681512 None:intergenic 35.0%
! GTTATGGTGGAAATGTGTAT+TGG - chr3_3:6681630-6681649 Msa0440110:intron 35.0%
TTAAGTGTTCCATGGCTAAA+AGG + chr3_3:6681945-6681964 None:intergenic 35.0%
! GTGAGTTTTTATGAACTAGG+AGG + chr3_3:6681995-6682014 None:intergenic 35.0%
! CATGTATTTGAAGTTCCAGA+TGG - chr3_3:6682235-6682254 Msa0440110:CDS 35.0%
TACAAATTGAAGATCATGCC+AGG - chr3_3:6682259-6682278 Msa0440110:CDS 35.0%
! GTTGCTTTATCATGATCGTT+AGG - chr3_3:6682301-6682320 Msa0440110:CDS 35.0%
GACATTCAAACACATGAACT+TGG + chr3_3:6682882-6682901 None:intergenic 35.0%
AGGGGATGTGAAGATGAATT+TGG + chr3_3:6672820-6672839 None:intergenic 40.0%
TGTTGTGTTGTGTTGTGAGT+TGG + chr3_3:6672869-6672888 None:intergenic 40.0%
AGAGAAAACGGTGGTGATTA+TGG + chr3_3:6672945-6672964 None:intergenic 40.0%
GAGTGTGAATCTAGAAGTGA+AGG + chr3_3:6672985-6673004 None:intergenic 40.0%
! GCGTATTTCTACAGAACCAT+TGG - chr3_3:6673098-6673117 Msa0440110:three_prime_UTR 40.0%
!!! CGTTGATGATTCGAAGCTTT+TGG + chr3_3:6673218-6673237 None:intergenic 40.0%
AAAGCTTCGAATCATCAACG+CGG - chr3_3:6673218-6673237 Msa0440110:CDS 40.0%
TACAGAGTGAGACGTTTCTT+CGG - chr3_3:6673243-6673262 Msa0440110:intron 40.0%
! TCAAGAGCATGTGTTGTGTT+CGG - chr3_3:6673362-6673381 Msa0440110:intron 40.0%
! GAGAAGATGGATTCTGGTAA+TGG - chr3_3:6673468-6673487 Msa0440110:intron 40.0%
!! TCTGGTAATGGAAATTCTGG+TGG - chr3_3:6673480-6673499 Msa0440110:intron 40.0%
!!! GAAATTCTGGTGGTGGTTTT+GGG - chr3_3:6673490-6673509 Msa0440110:intron 40.0%
GAGAGGTTCTATGATTGCAT+TGG - chr3_3:6673576-6673595 Msa0440110:intron 40.0%
AGGTTCTATGATTGCATTGG+AGG - chr3_3:6673579-6673598 Msa0440110:intron 40.0%
GATTGCATTGGAGGAGTAAT+TGG - chr3_3:6673588-6673607 Msa0440110:intron 40.0%
TGGTTCCCATATAATTGGAG+TGG + chr3_3:6673744-6673763 None:intergenic 40.0%
CTCCAATTATATGGGAACCA+AGG - chr3_3:6673744-6673763 Msa0440110:intron 40.0%
!! TGGTAATGGTTGGAGTTATG+TGG - chr3_3:6673778-6673797 Msa0440110:intron 40.0%
TGGTGCAATCCTTGATATTG+CGG - chr3_3:6673798-6673817 Msa0440110:intron 40.0%
AGCAATTCTCCGCAATATCA+AGG + chr3_3:6673810-6673829 None:intergenic 40.0%
TTGTGTCATGGCTTAGATTG+AGG - chr3_3:6673849-6673868 Msa0440110:intron 40.0%
AACAGATTGGGAACCTGAAT+TGG - chr3_3:6673890-6673909 Msa0440110:intron 40.0%
ACAGATTGGGAACCTGAATT+GGG - chr3_3:6673891-6673910 Msa0440110:intron 40.0%
! CTTTTCCCTCTTCCACTATT+GGG + chr3_3:6673930-6673949 None:intergenic 40.0%
! TCTTTTCCCTCTTCCACTAT+TGG + chr3_3:6673931-6673950 None:intergenic 40.0%
AGTGGAAGAGGGAAAAGAAA+CGG - chr3_3:6673933-6673952 Msa0440110:CDS 40.0%
AAAATTGTGAGAGGCCGAAT+TGG - chr3_3:6674182-6674201 Msa0440110:intron 40.0%
AAATTGTGAGAGGCCGAATT+GGG - chr3_3:6674183-6674202 Msa0440110:intron 40.0%
AGAAGAGTGAAGACCCAATT+CGG + chr3_3:6674199-6674218 None:intergenic 40.0%
ATGACACATAACAGTGGGAA+TGG + chr3_3:6674302-6674321 None:intergenic 40.0%
GTTCGAATGACACATAACAG+TGG + chr3_3:6674308-6674327 None:intergenic 40.0%
TTGTCCAACAATTGGTTGAC+CGG - chr3_3:6674502-6674521 Msa0440110:intron 40.0%
TTGACCGGAAGAATACAAAC+TGG - chr3_3:6674517-6674536 Msa0440110:intron 40.0%
GAGACCAGTTTGTATTCTTC+CGG + chr3_3:6674524-6674543 None:intergenic 40.0%
CACATTCACGAAGTGAAAGA+AGG - chr3_3:6674546-6674565 Msa0440110:intron 40.0%
CCAAAGGATAAATTTCACCC+AGG + chr3_3:6674761-6674780 None:intergenic 40.0%
CCTGGGTGAAATTTATCCTT+TGG - chr3_3:6674758-6674777 Msa0440110:intron 40.0%
GGTGAAATTTATCCTTTGGG+AGG - chr3_3:6674762-6674781 Msa0440110:intron 40.0%
GATTTAGTTGATCCTAGCAC+TGG - chr3_3:6674801-6674820 Msa0440110:intron 40.0%
AACAAAGTCCTCCCACAAAA+CGG + chr3_3:6674852-6674871 None:intergenic 40.0%
!! TTCTGCTGTTTCACCTTTCA+AGG - chr3_3:6674999-6675018 Msa0440110:CDS 40.0%
! CATCCCTGTCAACTTTAAGA+AGG + chr3_3:6675636-6675655 None:intergenic 40.0%
TTAGTTCCTGCTGGACTAAA+TGG + chr3_3:6676114-6676133 None:intergenic 40.0%
!! AAATGCGAAGTGTTGCATAG+TGG + chr3_3:6676172-6676191 None:intergenic 40.0%
AGGTTGGAAGTTGGATAGAA+AGG + chr3_3:6676373-6676392 None:intergenic 40.0%
AGAAGGAAAAGGTTGGAAGT+TGG + chr3_3:6676382-6676401 None:intergenic 40.0%
GATTGGAAGAAGGAAAAGGT+TGG + chr3_3:6676389-6676408 None:intergenic 40.0%
! ACCTTTTCCTTCTTCCAATC+TGG - chr3_3:6676389-6676408 Msa0440110:intron 40.0%
TCCAGATTGGAAGAAGGAAA+AGG + chr3_3:6676393-6676412 None:intergenic 40.0%
! TTTTCCTTCTTCCAATCTGG+AGG - chr3_3:6676392-6676411 Msa0440110:intron 40.0%
ATATCCTCCAGATTGGAAGA+AGG + chr3_3:6676399-6676418 None:intergenic 40.0%
TGTGCCTGTATAACAGAAAC+TGG - chr3_3:6676618-6676637 Msa0440110:intron 40.0%
GTGCCTGTATAACAGAAACT+GGG - chr3_3:6676619-6676638 Msa0440110:intron 40.0%
TGCCTGTATAACAGAAACTG+GGG - chr3_3:6676620-6676639 Msa0440110:intron 40.0%
AACCCCAGTTTCTGTTATAC+AGG + chr3_3:6676625-6676644 Msa0440120:CDS 40.0%
ATGGAGAAGAAATGTCCAGA+TGG - chr3_3:6676694-6676713 Msa0440110:intron 40.0%
TCAAATCACATTCCACGAGA+TGG + chr3_3:6676838-6676857 Msa0440120:CDS 40.0%
TGTAGTCATGAACCAGAGAT+AGG - chr3_3:6677103-6677122 Msa0440110:intron 40.0%
! ATTCAACCATCTTTGGAGGT+TGG + chr3_3:6677172-6677191 Msa0440120:CDS 40.0%
AGATGGTTGAATTGCCTATC+TGG - chr3_3:6677180-6677199 Msa0440110:intron 40.0%
ACACCAATAACAGTCTGAGT+AGG - chr3_3:6677708-6677727 Msa0440110:intron 40.0%
ACTCCTACTCAGACTGTTAT+TGG + chr3_3:6677714-6677733 None:intergenic 40.0%
! TGGGTATTTTGTATGTGGGT+TGG + chr3_3:6678099-6678118 None:intergenic 40.0%
! ACAAGGTGAATCTTTAGGAG+GGG + chr3_3:6678292-6678311 None:intergenic 40.0%
! GACAAGGTGAATCTTTAGGA+GGG + chr3_3:6678293-6678312 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + chr3_3:6678297-6678316 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG - chr3_3:6678297-6678316 Msa0440110:intron 40.0%
! TACTTCAAGTTATGGGATCC+TGG + chr3_3:6678345-6678364 None:intergenic 40.0%
TGAAGTAGAGTGACAGATCA+AGG - chr3_3:6678358-6678377 Msa0440110:intron 40.0%
CAAAACAGAGTGTATGATCC+AGG + chr3_3:6678405-6678424 None:intergenic 40.0%
! GAATTCCGACAACCATTTTG+AGG + chr3_3:6678502-6678521 None:intergenic 40.0%
TCATTTCAGGATTCTGCTGT+TGG + chr3_3:6678524-6678543 None:intergenic 40.0%
AGGATGCAGAAAAGATGAAG+GGG + chr3_3:6678614-6678633 None:intergenic 40.0%
CAGGATGCAGAAAAGATGAA+GGG + chr3_3:6678615-6678634 None:intergenic 40.0%
TCAGGATGCAGAAAAGATGA+AGG + chr3_3:6678616-6678635 None:intergenic 40.0%
AGATGTCGAAGAAGAAGTCA+AGG + chr3_3:6678640-6678659 None:intergenic 40.0%
TCCTTCAAACACCCTTTCAA+TGG - chr3_3:6678708-6678727 Msa0440110:intron 40.0%
!! ACCATTGAAAGGGTGTTTGA+AGG + chr3_3:6678712-6678731 None:intergenic 40.0%
CCATTGCAGAACCATTGAAA+GGG + chr3_3:6678722-6678741 None:intergenic 40.0%
TCCATTGCAGAACCATTGAA+AGG + chr3_3:6678723-6678742 None:intergenic 40.0%
!! GATTGAGTTGGAAGAAGACA+GGG + chr3_3:6678787-6678806 None:intergenic 40.0%
!! TGATTGAGTTGGAAGAAGAC+AGG + chr3_3:6678788-6678807 None:intergenic 40.0%
! CAATCAGAACGTTTTTCCGT+TGG - chr3_3:6678802-6678821 Msa0440110:intron 40.0%
TTCAACAAGGGACTAACCAA+CGG + chr3_3:6678821-6678840 None:intergenic 40.0%
GCCTATACATGATGAAGAAG+AGG + chr3_3:6678892-6678911 None:intergenic 40.0%
AATGATTGCCAACTTGCATG+TGG - chr3_3:6678960-6678979 Msa0440110:CDS 40.0%
TACACCAGAGACAGAGAAAT+TGG + chr3_3:6679051-6679070 None:intergenic 40.0%
! ATGGAGTTTCGAGTGTTTGA+AGG + chr3_3:6679131-6679150 None:intergenic 40.0%
GTGGTATGTTATGGCAGAAA+TGG + chr3_3:6679150-6679169 None:intergenic 40.0%
CTGATACCAGTGTTAGATAC+TGG - chr3_3:6679188-6679207 Msa0440110:intron 40.0%
TCTGAACCAGTATCTAACAC+TGG + chr3_3:6679197-6679216 None:intergenic 40.0%
! TAACCAACCTCTAGGAGTTA+GGG - chr3_3:6679327-6679346 Msa0440110:intron 40.0%
! TGGGTATTTTGTATGTGGGT+TGG + chr3_3:6678099-6678118 None:intergenic 40.0%
!!! TTTTAATTTGCCAGCGTCTC+TGG - chr3_3:6679617-6679636 Msa0440110:intron 40.0%
! ATCTAGGTGCTATAATGGTG+TGG - chr3_3:6679697-6679716 Msa0440110:intron 40.0%
AGTGCAAACCTCAGAAAAAG+AGG + chr3_3:6680049-6680068 None:intergenic 40.0%
! AGTAAAGTGAGCTCTAATCC+AGG + chr3_3:6680089-6680108 None:intergenic 40.0%
!! TGGTTCTAAAACACAGCAGT+AGG + chr3_3:6680132-6680151 None:intergenic 40.0%
CGGTTCTCCAACTTTAAACA+TGG + chr3_3:6680152-6680171 None:intergenic 40.0%
! ATATCCAATAGAGCACCATC+AGG + chr3_3:6680316-6680335 None:intergenic 40.0%
TGGTGTGCATATCTATACCT+CGG + chr3_3:6680386-6680405 None:intergenic 40.0%
GCTCGTTTAATGTACATGTC+AGG + chr3_3:6680873-6680892 None:intergenic 40.0%
CATACGCGTTACAACACTTA+CGG + chr3_3:6680971-6680990 None:intergenic 40.0%
TAACTCAGATCCCTTCGATA+TGG + chr3_3:6681213-6681232 None:intergenic 40.0%
GGGATCTGAGTTACAAATAG+AGG - chr3_3:6681220-6681239 Msa0440110:intron 40.0%
CTTCCATTGACCTGGAATAA+AGG + chr3_3:6681352-6681371 None:intergenic 40.0%
! CATTTTCGGCTATTATGACC+AGG + chr3_3:6681375-6681394 None:intergenic 40.0%
GTGAATCCATACTGCATCAT+GGG - chr3_3:6681425-6681444 Msa0440110:intron 40.0%
!! GAGCTTCTTGTTACTTTGCT+AGG - chr3_3:6681552-6681571 Msa0440110:intron 40.0%
!! TCTTGTTACTTTGCTAGGTG+TGG - chr3_3:6681557-6681576 Msa0440110:intron 40.0%
!! AATGTCAAGGTGTTGAACGA+GGG - chr3_3:6681596-6681615 Msa0440110:intron 40.0%
TGTTGAACGAGGGAATTGAT+TGG - chr3_3:6681606-6681625 Msa0440110:intron 40.0%
GAGGGAATTGATTGGAGTTA+TGG - chr3_3:6681614-6681633 Msa0440110:intron 40.0%
GGAATTGATTGGAGTTATGG+TGG - chr3_3:6681617-6681636 Msa0440110:intron 40.0%
ACATGATGTGAAAAGGTCTG+AGG - chr3_3:6681655-6681674 Msa0440110:intron 40.0%
AGCTACTGATGTTGTCTTAC+AGG - chr3_3:6681715-6681734 Msa0440110:intron 40.0%
!! TGACTAATAGGTCGGTTTGA+TGG + chr3_3:6682036-6682055 None:intergenic 40.0%
TGAGTAGGTGACTAATAGGT+CGG + chr3_3:6682044-6682063 None:intergenic 40.0%
CAGTTAGATCCGATTGAAGA+GGG - chr3_3:6682425-6682444 Msa0440110:CDS 40.0%
TCCATCATACCCTCTTCAAT+CGG + chr3_3:6682437-6682456 None:intergenic 40.0%
CACTGGGATTACAAGATAGA+AGG - chr3_3:6682470-6682489 Msa0440110:CDS 40.0%
! TCATGGTTCACAGTTGATGT+TGG - chr3_3:6682560-6682579 Msa0440110:CDS 40.0%
AAAACAACCTAACGTCGCAA+AGG + chr3_3:6682640-6682659 None:intergenic 40.0%
ATTGAGAGGAATGCAAGCAA+TGG - chr3_3:6682751-6682770 Msa0440110:five_prime_UTR 40.0%
GGCGACTTACAACAGAAAAT+GGG + chr3_3:6682861-6682880 None:intergenic 40.0%
TGGCGACTTACAACAGAAAA+TGG + chr3_3:6682862-6682881 None:intergenic 40.0%
ATGAGGATATACCGTGAAGG+AGG + chr3_3:6672758-6672777 None:intergenic 45.0%
GCTATGAGGATATACCGTGA+AGG + chr3_3:6672761-6672780 None:intergenic 45.0%
AAGTGAAGTGGAGTGAAGCA+TGG + chr3_3:6672917-6672936 None:intergenic 45.0%
! GGTGGTGGTGATAATTCCAA+TGG + chr3_3:6673117-6673136 None:intergenic 45.0%
! TAGTCCAGCATTTCTGGAAG+AGG + chr3_3:6673271-6673290 None:intergenic 45.0%
!! CAGAAATGCTGGACTAGCTA+GGG - chr3_3:6673275-6673294 Msa0440110:intron 45.0%
! GTTGAAGTGTTTGGTAGCTG+CGG - chr3_3:6673338-6673357 Msa0440110:intron 45.0%
! TTGAAGTGTTTGGTAGCTGC+GGG - chr3_3:6673339-6673358 Msa0440110:intron 45.0%
! CAAGAGCATGTGTTGTGTTC+GGG - chr3_3:6673363-6673382 Msa0440110:intron 45.0%
!! GAAGAGTGCGTTTTATGCTC+TGG - chr3_3:6673434-6673453 Msa0440110:intron 45.0%
GGCGAAGATGATTGAGAAGA+TGG - chr3_3:6673455-6673474 Msa0440110:intron 45.0%
!! GGTAATGGAAATTCTGGTGG+TGG - chr3_3:6673483-6673502 Msa0440110:intron 45.0%
!!! GGAAATTCTGGTGGTGGTTT+TGG - chr3_3:6673489-6673508 Msa0440110:intron 45.0%
CGGAGAATTGCTGTCAAATG+CGG - chr3_3:6673818-6673837 Msa0440110:intron 45.0%
GCGGCTAAACTATTGTGTCA+TGG - chr3_3:6673837-6673856 Msa0440110:intron 45.0%
! ACCAATCCCAATAGTGGAAG+AGG - chr3_3:6673921-6673940 Msa0440110:intron 45.0%
! CCAATCCCAATAGTGGAAGA+GGG - chr3_3:6673922-6673941 Msa0440110:intron 45.0%
TGAAGAGTGAAGACCCACTT+CGG - chr3_3:6673964-6673983 Msa0440110:CDS 45.0%
TAACTGTCAGGAACCGAAGT+GGG + chr3_3:6673980-6673999 None:intergenic 45.0%
ATAACTGTCAGGAACCGAAG+TGG + chr3_3:6673981-6674000 None:intergenic 45.0%
! GGCCTCTCACAATTTTCTTG+CGG + chr3_3:6674178-6674197 None:intergenic 45.0%
! TGCAAGGGAATTTAAAGCGC+AGG - chr3_3:6674265-6674284 Msa0440110:CDS 45.0%
ACATAACAGTGGGAATGGAC+AGG + chr3_3:6674297-6674316 None:intergenic 45.0%
CTTCACGGAGAAGTTGTACT+TGG - chr3_3:6674387-6674406 Msa0440110:intron 45.0%
AGTTGTACTTGGCGTGGTTT+AGG - chr3_3:6674398-6674417 Msa0440110:CDS 45.0%
TCTTCCGGTCAACCAATTGT+TGG + chr3_3:6674509-6674528 None:intergenic 45.0%
!! GGGCATCGATTCCCAAAATT+TGG + chr3_3:6674572-6674591 None:intergenic 45.0%
AACCTCTATACCCCATAGAG+CGG + chr3_3:6674640-6674659 None:intergenic 45.0%
GGATAAATTTCACCCAGGTC+TGG + chr3_3:6674756-6674775 None:intergenic 45.0%
! GTTTTGTGGGAGGACTTTGT+TGG - chr3_3:6674851-6674870 Msa0440110:intron 45.0%
TGCGAAACACTCTCTTGGTT+TGG - chr3_3:6675126-6675145 Msa0440110:intron 45.0%
!! ACACTCTCTTGGTTTGGAAG+AGG - chr3_3:6675132-6675151 Msa0440110:intron 45.0%
CATATAACACCATGACCACC+AGG + chr3_3:6675343-6675362 None:intergenic 45.0%
!! CTGGTGGTCATGGTGTTATA+TGG - chr3_3:6675341-6675360 Msa0440110:intron 45.0%
TGGAAACTTGCCCATGACAA+AGG - chr3_3:6675361-6675380 Msa0440110:intron 45.0%
!! TTGGCCTTGCAGTAATGTTG+TGG - chr3_3:6675518-6675537 Msa0440110:intron 45.0%
TGGAATGATGTGGGGCAAAA+TGG - chr3_3:6675880-6675899 Msa0440110:intron 45.0%
ACTTGGACTTATGGCTGATC+TGG - chr3_3:6675963-6675982 Msa0440110:CDS 45.0%
CTTATGGCTGATCTGGTCAA+TGG - chr3_3:6675970-6675989 Msa0440110:CDS 45.0%
!! ACAGCTTGAACCAGGTTGAT+CGG - chr3_3:6676045-6676064 Msa0440110:intron 45.0%
!! ACCAGGTTGATCGGTCAAAA+CGG - chr3_3:6676054-6676073 Msa0440110:intron 45.0%
! TATGCAGGTTTAGTTCCTGC+TGG + chr3_3:6676123-6676142 None:intergenic 45.0%
GCTCTCACAATTAGGTATGC+AGG + chr3_3:6676138-6676157 None:intergenic 45.0%
GCATGCAATATCCTCCAGAT+TGG + chr3_3:6676406-6676425 None:intergenic 45.0%
AGAAATGTCCAGATGGCAAC+TGG - chr3_3:6676701-6676720 Msa0440110:intron 45.0%
GAAATGTCCAGATGGCAACT+GGG - chr3_3:6676702-6676721 Msa0440110:intron 45.0%
CTGATCTAGGAACCTATCTC+TGG + chr3_3:6677118-6677137 Msa0440120:CDS 45.0%
CAGAGATAGGTTCCTAGATC+AGG - chr3_3:6677116-6677135 Msa0440110:intron 45.0%
! CCATCTTTGGAGGTTGGATT+GGG + chr3_3:6677166-6677185 Msa0440120:CDS 45.0%
! ACCATCTTTGGAGGTTGGAT+TGG + chr3_3:6677167-6677186 Msa0440120:CDS 45.0%
GGCAATTCAACCATCTTTGG+AGG + chr3_3:6677176-6677195 Msa0440120:CDS 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr3_3:6678047-6678066 Msa0440110:intron 45.0%
AGAGGAAAAGGGAGGAGATT+GGG + chr3_3:6678118-6678137 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+AGG + chr3_3:6678126-6678145 None:intergenic 45.0%
GGACAAGGTGAATCTTTAGG+AGG + chr3_3:6678294-6678313 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG + chr3_3:6678309-6678328 None:intergenic 45.0%
GGATAACATAAGTGTCCTCC+AGG - chr3_3:6678324-6678343 Msa0440110:intron 45.0%
! TTCAAGTTATGGGATCCTGG+AGG + chr3_3:6678342-6678361 None:intergenic 45.0%
TAGAGTGACAGATCAAGGTG+TGG - chr3_3:6678363-6678382 Msa0440110:intron 45.0%
GGAGCATGAAAACATATGCC+TGG - chr3_3:6678384-6678403 Msa0440110:intron 45.0%
TGCTTCCTCACTCTCTTTCT+GGG + chr3_3:6678442-6678461 None:intergenic 45.0%
AAAGAGAGTGAGGAAGCAGT+AGG - chr3_3:6678444-6678463 Msa0440110:intron 45.0%
ACCCTCCTCAAAATGGTTGT+CGG - chr3_3:6678494-6678513 Msa0440110:intron 45.0%
!! TCCGACAACCATTTTGAGGA+GGG + chr3_3:6678498-6678517 None:intergenic 45.0%
!! TTCCGACAACCATTTTGAGG+AGG + chr3_3:6678499-6678518 None:intergenic 45.0%
TGATGATAGGGCGAACACTA+AGG - chr3_3:6678571-6678590 Msa0440110:intron 45.0%
GGATGCAGAAAAGATGAAGG+GGG + chr3_3:6678613-6678632 None:intergenic 45.0%
CGAAGAAGAAGTCAAGGTTC+AGG + chr3_3:6678634-6678653 None:intergenic 45.0%
! CCCTTTCAATGGTTCTGCAA+TGG - chr3_3:6678719-6678738 Msa0440110:intron 45.0%
! CATTCGTCACTGCCTTTTTG+TGG + chr3_3:6678944-6678963 None:intergenic 45.0%
!!! CTCATCAATGGTGGTTTTGG+TGG + chr3_3:6678998-6679017 None:intergenic 45.0%
! GTGCTCATCAATGGTGGTTT+TGG + chr3_3:6679001-6679020 None:intergenic 45.0%
TCTGCCAATTTCTCTGTCTC+TGG - chr3_3:6679044-6679063 Msa0440110:intron 45.0%
AAGGCGAAGAAGACGCATAT+TGG + chr3_3:6679112-6679131 None:intergenic 45.0%
CTTGGAACCGTGGTATGTTA+TGG + chr3_3:6679159-6679178 None:intergenic 45.0%
!! TGGTATCAGAGCATCGATCT+TGG + chr3_3:6679177-6679196 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr3_3:6678047-6678066 Msa0440110:intron 45.0%
! GTAACCAACCTCTAGGAGTT+AGG - chr3_3:6678054-6678073 Msa0440110:intron 45.0%
AGAGGAAAAGGGAGGAGATT+GGG + chr3_3:6678118-6678137 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+AGG + chr3_3:6678126-6678145 None:intergenic 45.0%
! AGGTGCTATAATGGTGTGGA+AGG - chr3_3:6679701-6679720 Msa0440110:intron 45.0%
GGTGTGCATATCTATACCTC+GGG + chr3_3:6680385-6680404 None:intergenic 45.0%
ATCCTTCTTCATCCTGCTCT+TGG - chr3_3:6680663-6680682 Msa0440110:intron 45.0%
! TTGCTGTGACAGTTTTACGG+TGG - chr3_3:6681185-6681204 Msa0440110:intron 45.0%
TTACGGTGGTTCCATATCGA+AGG - chr3_3:6681199-6681218 Msa0440110:intron 45.0%
TACGGTGGTTCCATATCGAA+GGG - chr3_3:6681200-6681219 Msa0440110:intron 45.0%
! TAGAGGTTGCAGAGCTCTTT+TGG - chr3_3:6681237-6681256 Msa0440110:intron 45.0%
! GCTCTTTTGGTGGAATGTTC+AGG - chr3_3:6681250-6681269 Msa0440110:intron 45.0%
GTGACTTGACCCTTTATTCC+AGG - chr3_3:6681339-6681358 Msa0440110:intron 45.0%
GACCCTTTATTCCAGGTCAA+TGG - chr3_3:6681346-6681365 Msa0440110:intron 45.0%
GGTGAATCCATACTGCATCA+TGG - chr3_3:6681424-6681443 Msa0440110:intron 45.0%
!! GAATGTCAAGGTGTTGAACG+AGG - chr3_3:6681595-6681614 Msa0440110:intron 45.0%
ATACAATGCCACCCACACAT+TGG - chr3_3:6681791-6681810 Msa0440110:intron 45.0%
TACAATGCCACCCACACATT+GGG - chr3_3:6681792-6681811 Msa0440110:intron 45.0%
AACAGTCAGACCCAATGTGT+GGG + chr3_3:6681805-6681824 None:intergenic 45.0%
AAACAGTCAGACCCAATGTG+TGG + chr3_3:6681806-6681825 None:intergenic 45.0%
CAGGTGAGTAGGTGACTAAT+AGG + chr3_3:6682048-6682067 None:intergenic 45.0%
AAGCAACGGTTAAGAGACCT+GGG + chr3_3:6682288-6682307 None:intergenic 45.0%
AAAGCAACGGTTAAGAGACC+TGG + chr3_3:6682289-6682308 None:intergenic 45.0%
CCTCTTCAATCGGATCTAAC+TGG + chr3_3:6682427-6682446 None:intergenic 45.0%
CCAGTTAGATCCGATTGAAG+AGG - chr3_3:6682424-6682443 Msa0440110:CDS 45.0%
! TCCGATTGAAGAGGGTATGA+TGG - chr3_3:6682433-6682452 Msa0440110:CDS 45.0%
CAGACATCTGATGTGGTTAG+TGG + chr3_3:6682531-6682550 None:intergenic 45.0%
AGTTCAACCTTTGCGACGTT+AGG - chr3_3:6682630-6682649 Msa0440110:CDS 45.0%
!!! GTTATAATTTTTAAAAAATT+TGG - chr3_3:6676266-6676285 Msa0440110:intron 5.0%
!!! ATTTTATGTATAAATTAATT+TGG - chr3_3:6680410-6680429 Msa0440110:intron 5.0%
!!! AGTTTATTTTATTTATTTTT+AGG + chr3_3:6682135-6682154 None:intergenic 5.0%
ATATACCGTGAAGGAGGAGG+AGG + chr3_3:6672752-6672771 None:intergenic 50.0%
AGGATATACCGTGAAGGAGG+AGG + chr3_3:6672755-6672774 None:intergenic 50.0%
GAATTATCACCACCACCTCC+CGG - chr3_3:6673120-6673139 Msa0440110:exon 50.0%
AAATTGAATCCGGGAGGTGG+TGG + chr3_3:6673132-6673151 None:intergenic 50.0%
TTCGCGGCGGAAATTGAATC+CGG + chr3_3:6673142-6673161 None:intergenic 50.0%
AGGTGAGTCTGGTGATTTCG+CGG + chr3_3:6673158-6673177 None:intergenic 50.0%
!! TTGGTCGAGAGTATCGCATG+CGG + chr3_3:6673199-6673218 None:intergenic 50.0%
GGTTCCTCTTCCAGAAATGC+TGG - chr3_3:6673264-6673283 Msa0440110:intron 50.0%
CCTAGCTAGTCCAGCATTTC+TGG + chr3_3:6673277-6673296 None:intergenic 50.0%
!! CCAGAAATGCTGGACTAGCT+AGG - chr3_3:6673274-6673293 Msa0440110:intron 50.0%
!! CTAGGGTTTTATCGACGCTG+CGG - chr3_3:6673292-6673311 Msa0440110:intron 50.0%
GTGTTCGGGAGAAACTATGC+TGG - chr3_3:6673377-6673396 Msa0440110:CDS 50.0%
GGGAGAAACTATGCTGGAGA+TGG - chr3_3:6673383-6673402 Msa0440110:CDS 50.0%
TATGCTGGAGATGGAGTCGT+CGG - chr3_3:6673392-6673411 Msa0440110:CDS 50.0%
!!! TTCTGGTGGTGGTTTTGGGA+TGG - chr3_3:6673494-6673513 Msa0440110:intron 50.0%
!!! TCTGGTGGTGGTTTTGGGAT+GGG - chr3_3:6673495-6673514 Msa0440110:intron 50.0%
!!! TGGTGGTTTTGGGATGGGTT+TGG - chr3_3:6673500-6673519 Msa0440110:intron 50.0%
!!! TGGTTTTGGGATGGGTTTGG+AGG - chr3_3:6673503-6673522 Msa0440110:intron 50.0%
CCCTCTTCCACTATTGGGAT+TGG + chr3_3:6673925-6673944 None:intergenic 50.0%
GGTTCCTGACAGTTATCTCG+CGG - chr3_3:6673985-6674004 Msa0440110:CDS 50.0%
GGCCGCAAGAAAATTGTGAG+AGG - chr3_3:6674173-6674192 Msa0440110:intron 50.0%
TCAGAAAGGTCAAGCCCAGT+CGG + chr3_3:6674594-6674613 None:intergenic 50.0%
ATGCATCTCAAGCCGCTCTA+TGG - chr3_3:6674625-6674644 Msa0440110:intron 50.0%
TGCATCTCAAGCCGCTCTAT+GGG - chr3_3:6674626-6674645 Msa0440110:intron 50.0%
!! TTCTAGGGTTTGCCAGACCT+GGG - chr3_3:6674741-6674760 Msa0440110:intron 50.0%
!!! CTGCAATGCTGCCGTTTTGT+GGG - chr3_3:6674838-6674857 Msa0440110:intron 50.0%
TGTGGGAGGACTTTGTTGGA+AGG - chr3_3:6674855-6674874 Msa0440110:intron 50.0%
!! CCAAGAGAGTGTTTCGCACA+GGG + chr3_3:6675124-6675143 None:intergenic 50.0%
!! ACCAAGAGAGTGTTTCGCAC+AGG + chr3_3:6675125-6675144 None:intergenic 50.0%
GAATTGGCAGCCTCTTGTTC+CGG - chr3_3:6675258-6675277 Msa0440110:intron 50.0%
! CCATCTTCTGCACTGACAAC+CGG + chr3_3:6675280-6675299 None:intergenic 50.0%
CGGTTGTCAGTGCAGAAGAT+GGG - chr3_3:6675278-6675297 Msa0440110:CDS 50.0%
CAATAACGACGGACCTGACT+TGG + chr3_3:6675435-6675454 None:intergenic 50.0%
GCTGCCACAACATTACTGCA+AGG + chr3_3:6675525-6675544 None:intergenic 50.0%
AGCTACAGATGTAACCCTCC+TGG - chr3_3:6675542-6675561 Msa0440110:intron 50.0%
!! GATCGGTTTGCGTCAAGGAA+AGG - chr3_3:6675575-6675594 Msa0440110:intron 50.0%
CAGCTAGAACAGCTTGAACC+AGG - chr3_3:6676037-6676056 Msa0440110:intron 50.0%
CTTCTGTTGCACCTGAGACA+CGG + chr3_3:6676660-6676679 Msa0440120:CDS 50.0%
CCAGATGGCAACTGGGAATA+CGG - chr3_3:6676709-6676728 Msa0440110:intron 50.0%
CCCAATCCAACCTCCAAAGA+TGG - chr3_3:6677163-6677182 Msa0440110:intron 50.0%
TTACCATCTGCGGAGCTTGT+TGG - chr3_3:6677432-6677451 Msa0440110:intron 50.0%
GCTCTCAAACTCCTAGAGGT+TGG + chr3_3:6678061-6678080 None:intergenic 50.0%
CTAGGCTCTCAAACTCCTAG+AGG + chr3_3:6678065-6678084 None:intergenic 50.0%
!! GGGTTGGTTTAGGAGAGACT+AGG + chr3_3:6678083-6678102 None:intergenic 50.0%
CAGAGGAAAAGGGAGGAGAT+TGG + chr3_3:6678119-6678138 None:intergenic 50.0%
TCACCTTGTCCTCAAGGTGA+AGG - chr3_3:6678303-6678322 Msa0440110:intron 50.0%
TTTGGCCCAGAAAGAGAGTG+AGG - chr3_3:6678434-6678453 Msa0440110:intron 50.0%
CTGCTTCCTCACTCTCTTTC+TGG + chr3_3:6678443-6678462 None:intergenic 50.0%
ATTGGCCACCCTCCTCAAAA+TGG - chr3_3:6678487-6678506 Msa0440110:intron 50.0%
!! GACAACCATTTTGAGGAGGG+TGG + chr3_3:6678495-6678514 None:intergenic 50.0%
GCAGAATCCTGAAATGACCG+TGG - chr3_3:6678527-6678546 Msa0440110:intron 50.0%
CCTTTCTCCACGGTCATTTC+AGG + chr3_3:6678537-6678556 None:intergenic 50.0%
CCTGAAATGACCGTGGAGAA+AGG - chr3_3:6678534-6678553 Msa0440110:intron 50.0%
CCTATCATCATTGCCTTGCC+GGG + chr3_3:6678561-6678580 None:intergenic 50.0%
CCCTATCATCATTGCCTTGC+CGG + chr3_3:6678562-6678581 None:intergenic 50.0%
CCGGCAAGGCAATGATGATA+GGG - chr3_3:6678559-6678578 Msa0440110:intron 50.0%
GAACACTAAGGTTCACAGCG+AGG - chr3_3:6678583-6678602 Msa0440110:intron 50.0%
TCGAAGTCGTTGACGGTTCA+AGG + chr3_3:6678855-6678874 None:intergenic 50.0%
GGCAAGACGTCTCGATATTC+TGG - chr3_3:6678909-6678928 Msa0440110:CDS 50.0%
GCCAACTTGCATGTGGATGA+CGG - chr3_3:6678967-6678986 Msa0440110:CDS 50.0%
! AACTTGCATGTGGATGACGG+CGG - chr3_3:6678970-6678989 Msa0440110:CDS 50.0%
GTGGATGTGCTCATCAATGG+TGG + chr3_3:6679007-6679026 None:intergenic 50.0%
TGCGTGGATGTGCTCATCAA+TGG + chr3_3:6679010-6679029 None:intergenic 50.0%
GCGAAGAAGACGCATATTGG+TGG + chr3_3:6679109-6679128 None:intergenic 50.0%
CAGAGGAAAAGGGAGGAGAT+TGG + chr3_3:6678119-6678138 None:intergenic 50.0%
! TAATTTGCCAGCGTCTCTGG+TGG - chr3_3:6679620-6679639 Msa0440110:intron 50.0%
TGGAGACAAGTCTTTACGCC+AGG - chr3_3:6679887-6679906 Msa0440110:intron 50.0%
! GAGCTCTAATCCAGGTATGC+TGG + chr3_3:6680081-6680100 None:intergenic 50.0%
! GACACCTGATGGTGCTCTAT+TGG - chr3_3:6680309-6680328 Msa0440110:CDS 50.0%
GACCAAGAGCAGGATGAAGA+AGG + chr3_3:6680668-6680687 None:intergenic 50.0%
ATCCTGCTCTTGGTCCTCTT+TGG - chr3_3:6680673-6680692 Msa0440110:intron 50.0%
TCCTGCTCTTGGTCCTCTTT+GGG - chr3_3:6680674-6680693 Msa0440110:intron 50.0%
TGTCTGGTGACTTCCCAAAG+AGG + chr3_3:6680690-6680709 None:intergenic 50.0%
CGCGTTACAACACTTACGGA+TGG + chr3_3:6680967-6680986 None:intergenic 50.0%
! AGGTTGCAGAGCTCTTTTGG+TGG - chr3_3:6681240-6681259 Msa0440110:intron 50.0%
ATTCCAGGTCAATGGAAGCC+TGG - chr3_3:6681354-6681373 Msa0440110:intron 50.0%
CCTTTGCCCATGATGCAGTA+TGG + chr3_3:6681434-6681453 None:intergenic 50.0%
CCATACTGCATCATGGGCAA+AGG - chr3_3:6681431-6681450 Msa0440110:intron 50.0%
TTTACCGAAGGCTAGGGATC+AGG + chr3_3:6681516-6681535 None:intergenic 50.0%
GTGCTGCAGATCATACTGCA+TGG - chr3_3:6681677-6681696 Msa0440110:intron 50.0%
!! GAAGAGGGTATGATGGACAG+TGG - chr3_3:6682440-6682459 Msa0440110:CDS 50.0%
!! GTATGATGGACAGTGGAAGC+TGG - chr3_3:6682447-6682466 Msa0440110:CDS 50.0%
GATGTCTGCTGCGTGAATCA+TGG - chr3_3:6682543-6682562 Msa0440110:CDS 50.0%
CACTTCCTCCTCCTCCTTCA+CGG - chr3_3:6672744-6672763 Msa0440110:three_prime_UTR 55.0%
CTGTAGAAATACGCGCGACG+TGG + chr3_3:6673092-6673111 None:intergenic 55.0%
CGGAAATTGAATCCGGGAGG+TGG + chr3_3:6673135-6673154 None:intergenic 55.0%
TCGCGGCGGAAATTGAATCC+GGG + chr3_3:6673141-6673160 None:intergenic 55.0%
TGAGTCTGGTGATTTCGCGG+CGG + chr3_3:6673155-6673174 None:intergenic 55.0%
!! GGTTTTATCGACGCTGCGGT+TGG - chr3_3:6673296-6673315 Msa0440110:intron 55.0%
ATCGACGCTGCGGTTGGATT+CGG - chr3_3:6673302-6673321 Msa0440110:intron 55.0%
! GTCGGTGATGGCTTCTGGTT+CGG - chr3_3:6673410-6673429 Msa0440110:CDS 55.0%
! AGACGTTGGCGCAAGTTGAG+AGG - chr3_3:6673559-6673578 Msa0440110:intron 55.0%
TAGGCCGCGAGATAACTGTC+AGG + chr3_3:6673992-6674011 None:intergenic 55.0%
CGGAGAAGTTGTACTTGGCG+TGG - chr3_3:6674392-6674411 Msa0440110:CDS 55.0%
AGAAAGGTCAAGCCCAGTCG+GGG + chr3_3:6674592-6674611 None:intergenic 55.0%
CAGAAAGGTCAAGCCCAGTC+GGG + chr3_3:6674593-6674612 None:intergenic 55.0%
GCATCTCAAGCCGCTCTATG+GGG - chr3_3:6674627-6674646 Msa0440110:intron 55.0%
AGCCGCTCTATGGGGTATAG+AGG - chr3_3:6674635-6674654 Msa0440110:intron 55.0%
CAGGTCTGGCAAACCCTAGA+AGG + chr3_3:6674742-6674761 None:intergenic 55.0%
!! CTTCTAGGGTTTGCCAGACC+TGG - chr3_3:6674740-6674759 Msa0440110:intron 55.0%
CAAAACGGCAGCATTGCAGC+AGG + chr3_3:6674837-6674856 None:intergenic 55.0%
!!! GCTGCAATGCTGCCGTTTTG+TGG - chr3_3:6674837-6674856 Msa0440110:intron 55.0%
!!! CAATGCTGCCGTTTTGTGGG+AGG - chr3_3:6674841-6674860 Msa0440110:intron 55.0%
CCCTGTGCGAAACACTCTCT+TGG - chr3_3:6675121-6675140 Msa0440110:intron 55.0%
! GCACTGACAACCGGAACAAG+AGG + chr3_3:6675271-6675290 None:intergenic 55.0%
CCGGTTGTCAGTGCAGAAGA+TGG - chr3_3:6675277-6675296 Msa0440110:CDS 55.0%
TCAGTGCAGAAGATGGGCAG+TGG - chr3_3:6675284-6675303 Msa0440110:CDS 55.0%
TGCAGAAGATGGGCAGTGGT+TGG - chr3_3:6675288-6675307 Msa0440110:CDS 55.0%
! GGCTTGCTCAAGGGACTGAA+CGG + chr3_3:6675322-6675341 None:intergenic 55.0%
TTCAGTCCCTTGAGCAAGCC+TGG - chr3_3:6675322-6675341 Msa0440110:CDS 55.0%
! TGACCACCAGGCTTGCTCAA+GGG + chr3_3:6675331-6675350 None:intergenic 55.0%
! ATGACCACCAGGCTTGCTCA+AGG + chr3_3:6675332-6675351 None:intergenic 55.0%
TTGAGCAAGCCTGGTGGTCA+TGG - chr3_3:6675331-6675350 Msa0440110:CDS 55.0%
!! TAACCCTCCTGGCCTTAGCA+GGG - chr3_3:6675553-6675572 Msa0440110:intron 55.0%
ACGCAAACCGATCCCTGCTA+AGG + chr3_3:6675568-6675587 None:intergenic 55.0%
!! GCCGTTTTGACCGATCAACC+TGG + chr3_3:6676058-6676077 None:intergenic 55.0%
TTGATCGGTCAAAACGGCCC+TGG - chr3_3:6676060-6676079 Msa0440110:intron 55.0%
CGTGTCTCAGGTGCAACAGA+AGG - chr3_3:6676658-6676677 Msa0440110:intron 55.0%
CCGTATTCCCAGTTGCCATC+TGG + chr3_3:6676712-6676731 Msa0440120:CDS 55.0%
GATCCAACAAGCTCCGCAGA+TGG + chr3_3:6677438-6677457 None:intergenic 55.0%
! GGGTGGCCAATGTCGTTTGA+TGG + chr3_3:6678478-6678497 None:intergenic 55.0%
ATGACCGTGGAGAAAGGACC+CGG - chr3_3:6678540-6678559 Msa0440110:intron 55.0%
CCCGGCAAGGCAATGATGAT+AGG - chr3_3:6678558-6678577 Msa0440110:intron 55.0%
GCCGTCATCCACATGCAAGT+TGG + chr3_3:6678971-6678990 None:intergenic 55.0%
GAAGTTGTGACTGCGTTGCG+TGG + chr3_3:6679026-6679045 None:intergenic 55.0%
!! GAGCATCGATCTTGGAACCG+TGG + chr3_3:6679169-6679188 None:intergenic 55.0%
GCTCCCTAACTCCTAGAGGT+TGG + chr3_3:6679333-6679352 None:intergenic 55.0%
CTAGGCTCCCTAACTCCTAG+AGG + chr3_3:6679337-6679356 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + chr3_3:6679355-6679374 None:intergenic 55.0%
TCCCAAAGAGGACCAAGAGC+AGG + chr3_3:6680678-6680697 None:intergenic 55.0%
TGACCAGGCTTCCATTGACC+TGG + chr3_3:6681360-6681379 None:intergenic 55.0%
AGTCAGACCCAATGTGTGGG+TGG + chr3_3:6681802-6681821 None:intergenic 55.0%
AAGATCATGCCAGGAAGCCC+AGG - chr3_3:6682268-6682287 Msa0440110:CDS 55.0%
GTTAAGAGACCTGGGCTTCC+TGG + chr3_3:6682280-6682299 None:intergenic 55.0%
CACGCAGCAGACATCTGATG+TGG + chr3_3:6682538-6682557 None:intergenic 55.0%
CGGCGGAAATTGAATCCGGG+AGG + chr3_3:6673138-6673157 None:intergenic 60.0%
ATCACGGAGGGAGGTGAGTC+TGG + chr3_3:6673169-6673188 None:intergenic 60.0%
TGCGGCGAGCTTATCACGGA+GGG + chr3_3:6673181-6673200 None:intergenic 60.0%
ATGCGGCGAGCTTATCACGG+AGG + chr3_3:6673182-6673201 None:intergenic 60.0%
CGCATGCGGCGAGCTTATCA+CGG + chr3_3:6673185-6673204 None:intergenic 60.0%
GGAGATGGAGTCGTCGGTGA+TGG - chr3_3:6673398-6673417 Msa0440110:CDS 60.0%
! GAGTCGTCGGTGATGGCTTC+TGG - chr3_3:6673405-6673424 Msa0440110:CDS 60.0%
TTGGGAATCGATGCCCCGAC+TGG - chr3_3:6674576-6674595 Msa0440110:intron 60.0%
TGGGAATCGATGCCCCGACT+GGG - chr3_3:6674577-6674596 Msa0440110:intron 60.0%
CTGTCTGCAGAGCCTCCCAA+AGG + chr3_3:6674777-6674796 None:intergenic 60.0%
GGCAGGCATTCACCAGTGCT+AGG + chr3_3:6674816-6674835 None:intergenic 60.0%
AGTCCCTTGAGCAAGCCTGG+TGG - chr3_3:6675325-6675344 Msa0440110:CDS 60.0%
GTGCAACTGTGCGCCAAGTC+AGG - chr3_3:6675419-6675438 Msa0440110:intron 60.0%
!! GTAACCCTCCTGGCCTTAGC+AGG - chr3_3:6675552-6675571 Msa0440110:intron 60.0%
GATCCCTGCTAAGGCCAGGA+GGG + chr3_3:6675559-6675578 None:intergenic 60.0%
!! CTCCTGGCCTTAGCAGGGAT+CGG - chr3_3:6675558-6675577 Msa0440110:intron 60.0%
AACCGATCCCTGCTAAGGCC+AGG + chr3_3:6675563-6675582 None:intergenic 60.0%
!! GCAGGGATCGGTTTGCGTCA+AGG - chr3_3:6675570-6675589 Msa0440110:intron 60.0%
GCATCCTGTGACCGTGTCTC+AGG - chr3_3:6676646-6676665 Msa0440110:intron 60.0%
TGCACCTGAGACACGGTCAC+AGG + chr3_3:6676653-6676672 Msa0440120:CDS 60.0%
CTTGCCGGGTCCTTTCTCCA+CGG + chr3_3:6678547-6678566 None:intergenic 60.0%
! GCCTCCTGATCCCTAGCCTT+CGG - chr3_3:6681509-6681528 Msa0440110:intron 60.0%
ACCGAAGGCTAGGGATCAGG+AGG + chr3_3:6681513-6681532 None:intergenic 60.0%
TGGACAGTGGAAGCTGGCAC+TGG - chr3_3:6682453-6682472 Msa0440110:CDS 60.0%
GGACAGTGGAAGCTGGCACT+GGG - chr3_3:6682454-6682473 Msa0440110:CDS 60.0%
GGCGAGCTTATCACGGAGGG+AGG + chr3_3:6673178-6673197 None:intergenic 65.0%
ACGGCAGCATTGCAGCAGGC+AGG + chr3_3:6674833-6674852 None:intergenic 65.0%
CGATCCCTGCTAAGGCCAGG+AGG + chr3_3:6675560-6675579 None:intergenic 65.0%
CGTGGAGAAAGGACCCGGCA+AGG - chr3_3:6678545-6678564 Msa0440110:intron 65.0%
CAGTCTGCCACCAGAGACGC+TGG + chr3_3:6679630-6679649 None:intergenic 65.0%
CAGCGTCTCTGGTGGCAGAC+TGG - chr3_3:6679628-6679647 Msa0440110:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 6672733 6682928 6672733 ID=Msa0440110;Name=Msa0440110
chr3_3 mRNA 6672733 6682928 6672733 ID=Msa0440110-mRNA-1;Parent=Msa0440110;Name=Msa0440110-mRNA-1;_AED=0.10;_eAED=0.10;_QI=183|1|1|1|0.93|0.94|17|402|871
chr3_3 exon 6672733 6673247 6672733 ID=Msa0440110-mRNA-1:exon:1437;Parent=Msa0440110-mRNA-1
chr3_3 exon 6673372 6673432 6673372 ID=Msa0440110-mRNA-1:exon:1436;Parent=Msa0440110-mRNA-1
chr3_3 exon 6673925 6674087 6673925 ID=Msa0440110-mRNA-1:exon:1435;Parent=Msa0440110-mRNA-1
chr3_3 exon 6674209 6674300 6674209 ID=Msa0440110-mRNA-1:exon:1434;Parent=Msa0440110-mRNA-1
chr3_3 exon 6674390 6674464 6674390 ID=Msa0440110-mRNA-1:exon:1433;Parent=Msa0440110-mRNA-1
chr3_3 exon 6674948 6675043 6674948 ID=Msa0440110-mRNA-1:exon:1432;Parent=Msa0440110-mRNA-1
chr3_3 exon 6675274 6675351 6675274 ID=Msa0440110-mRNA-1:exon:1431;Parent=Msa0440110-mRNA-1
chr3_3 exon 6675753 6675847 6675753 ID=Msa0440110-mRNA-1:exon:1430;Parent=Msa0440110-mRNA-1
chr3_3 exon 6675939 6676030 6675939 ID=Msa0440110-mRNA-1:exon:1429;Parent=Msa0440110-mRNA-1
chr3_3 exon 6678117 6678275 6678117 ID=Msa0440110-mRNA-1:exon:1428;Parent=Msa0440110-mRNA-1
chr3_3 exon 6678864 6679027 6678864 ID=Msa0440110-mRNA-1:exon:1427;Parent=Msa0440110-mRNA-1
chr3_3 exon 6680065 6680131 6680065 ID=Msa0440110-mRNA-1:exon:1426;Parent=Msa0440110-mRNA-1
chr3_3 exon 6680221 6680393 6680221 ID=Msa0440110-mRNA-1:exon:1425;Parent=Msa0440110-mRNA-1
chr3_3 exon 6680479 6680640 6680479 ID=Msa0440110-mRNA-1:exon:1424;Parent=Msa0440110-mRNA-1
chr3_3 exon 6680765 6680914 6680765 ID=Msa0440110-mRNA-1:exon:1423;Parent=Msa0440110-mRNA-1
chr3_3 exon 6681005 6681185 6681005 ID=Msa0440110-mRNA-1:exon:1422;Parent=Msa0440110-mRNA-1
chr3_3 exon 6682051 6682928 6682051 ID=Msa0440110-mRNA-1:exon:1421;Parent=Msa0440110-mRNA-1
chr3_3 five_prime_UTR 6682746 6682928 6682746 ID=Msa0440110-mRNA-1:five_prime_utr;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6682051 6682745 6682051 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6681005 6681185 6681005 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6680765 6680914 6680765 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6680479 6680640 6680479 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6680221 6680393 6680221 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6680065 6680131 6680065 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6678864 6679027 6678864 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6678117 6678275 6678117 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6675939 6676030 6675939 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6675753 6675847 6675753 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6675274 6675351 6675274 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6674948 6675043 6674948 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6674390 6674464 6674390 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6674209 6674300 6674209 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6673925 6674087 6673925 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6673372 6673432 6673372 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 CDS 6673135 6673247 6673135 ID=Msa0440110-mRNA-1:cds;Parent=Msa0440110-mRNA-1
chr3_3 three_prime_UTR 6672733 6673134 6672733 ID=Msa0440110-mRNA-1:three_prime_utr;Parent=Msa0440110-mRNA-1
Gene Sequence

>Msa0440110

ATGCTTCACTCCACTTCACTTCTTCACCATAATCACCACCGTTTTCTCTTTTCTTTTCGTTCTAAACCTTCACTTCTAGATTCACACTCACAATCACAACCTCTCTCTTTCTCAAAATCATTATCTCTTCCATCTTCATCTTCTTCTTCTTCTTCATCATCATCATCATGTTGCCACGTCGCGCGTATTTCTACAGAACCATTGGAATTATCACCACCACCTCCCGGATTCAATTTCCGCCGCGAAATCACCAGACTCACCTCCCTCCGTGATAAGCTCGCCGCATGCGATACTCTCGACCAAAAGCTTCGAATCATCAACGCGGATTACAGAGTGAGACGTTTCTTCGGTTCCTCTTCCAGAAATGCTGGACTAGCTAGGGTTTTATCGACGCTGCGGTTGGATTCGGAGAATTTGTTTTTGTTGAAGTGTTTGGTAGCTGCGGGTCAAGAGCATGTGTTGTGTTCGGGAGAAACTATGCTGGAGATGGAGTCGTCGGTGATGGCTTCTGGTTCGGTGAAGAGTGCGTTTTATGCTCTGGCGAAGATGATTGAGAAGATGGATTCTGGTAATGGAAATTCTGGTGGTGGTTTTGGGATGGGTTTGGAGGATCATGAAATTCGGGAGTTGAATAAGTTGTTAGAGACGTTGGCGCAAGTTGAGAGGTTCTATGATTGCATTGGAGGAGTAATTGGTTATCAGATTATGGTTCTGGAACTTATTGTCCAACAATTGGTTGACCGGAAGAATACAAACTGGTCTCAGCACATTCACGAAGTGAAAGAAGGCCAAATTTTGGGAATCGATGCCCCGACTGGGCTTGACCTTTCTGAAAATACGGAGTATGCATCTCAAGCCGCTCTATGGGGTATAGAGGGTTTGCCAGACCTGGGTGAAATTTATCCTTTGGGAGGCTCTGCAGACAGACTTGATTTAGTTGATCCTAGCACTGGTGAATGCCTGCCTGCTGCAATGCTGCCGTTTTGTGGGAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGAAAACAATGTATCACCCCTGTAGCAATAATGACAAGTTCAGCAAAGAATAATCACAAACACATCACTTCCCTGTGCGAAACACTCTCTTGGTTTGGAAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCGGTTGTCAGTGCAGAAGATGGGCAGTGGTTGGTCACTAAACCGTTCAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTTATATGGAAACTTGCCCATGACAAAGGCATCTTCAAATGGCTTTTTTGTCAAGGAAGAAAAGGTGCAACTGTGCGCCAAGTCAGTAATGTTGTGGCAGCTACAGATGTAACCCTCCTGGCCTTAGCAGGGATCGGTTTGCGTCAAGGAAAGAAACTGGGGTTCGCATCCTGTGACCGTGTCTCAGGTGCAACAGAAGGAATTAATGTACTGATGGAGAAGAAATGTCCAGATGGCAACTGGGAATACGGCGTTTCTTGCATTGAATACACTGAATTCGACAAGTTTGGGATTACTAATGGATCTCTTCCAAAAAGTTTGCAGGCAGAGTTTCCAGCTAATACAAACATCTTATATGTTGATTTACCATCTGCGGAGCTTGTTGGATCAAGTAAGAATGTGAATAGTATACCAGGAATGGTGTTAAATACAAAAAAGACAATAAATTATGTAGATCAGTTTGGAAGACATTGTAGCGTCTCTGGTGGCAGACTGGAGTGCACAATGCAAAATATAGCAGACAATTATTTCAATTCATATTCATCTAGGTGCTATAATGGTGTGGAAGATGAGCTAGATACATTTATTGTATATAATGAGCGGAGAAGGGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCTTTACGCCAGACACCTGATGGTGCTCTATTGGATATATTAAGAAACGCTCATGATCTTCTTTCACCATGTGATATAAAACTTCCCGAGATTGAAGCTGATGAGAACTACGTTTATTCAGGACCACCATTTCTTATCCTTCTTCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACCAGACAAAAATTTTACGGTGGTTCCATATCGAAGGGATCTGAGTTACAAATAGAGGTTGCAGAGCTCTTTTGGTGGAATGTTCAGGTCAATGGAAGCCTGGTCATAATAGCCGAAAATGTTATGGGCTCAATGAAGATTGATGAGAGTGGTGAATCCATACTGCATCATGGGCAAAGGTGTGGAAGATGTAAATTGCAGAATGTCAAGGTGTTGAACGAGGGAATTGATTGGAGTTATGGTGGAAATGTGTATTGGAAACATGATGTGAAAAGGTCTGAGGTGCTGCAGATCATACTGCATGGAAATGCTGAATTTGAAGCTACTGATGTTGTCTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGATACAAATTGAAGATCATGCCAGGAAGCCCAGGTTTAGCAATCCAGTTAGATCCGATTGAAGAGGGTATGATGGACAGTGGAAGCTGGCACTGGGATTACAAGATAGAAGGTTCTCACATTAAGCTAGAATTAGTAGAATCATAG
Protein sequence

>Msa0440110

MLHSTSLLHHNHHRFLFSFRSKPSLLDSHSQSQPLSFSKSLSLPSSSSSSSSSSSSCCHVARISTEPLELSPPPPGFNFRREITRLTSLRDKLAACDTLDQKLRIINADYRVRRFFGSSSRNAGLARVLSTLRLDSENLFLLKCLVAAGQEHVLCSGETMLEMESSVMASGSVKSAFYALAKMIEKMDSGNGNSGGGFGMGLEDHEIRELNKLLETLAQVERFYDCIGGVIGYQIMVLELIVQQLVDRKNTNWSQHIHEVKEGQILGIDAPTGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLDLVDPSTGECLPAAMLPFCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHITSLCETLSWFGRGRSTFQLFEQPLVPVVSAEDGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFKWLFCQGRKGATVRQVSNVVAATDVTLLALAGIGLRQGKKLGFASCDRVSGATEGINVLMEKKCPDGNWEYGVSCIEYTEFDKFGITNGSLPKSLQAEFPANTNILYVDLPSAELVGSSKNVNSIPGMVLNTKKTINYVDQFGRHCSVSGGRLECTMQNIADNYFNSYSSRCYNGVEDELDTFIVYNERRRVTSSAKKKRRHGDKSLRQTPDGALLDILRNAHDLLSPCDIKLPEIEADENYVYSGPPFLILLHPALGPLWEVTRQKFYGGSISKGSELQIEVAELFWWNVQVNGSLVIIAENVMGSMKIDESGESILHHGQRCGRCKLQNVKVLNEGIDWSYGGNVYWKHDVKRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKIMPGSPGLAIQLDPIEEGMMDSGSWHWDYKIEGSHIKLELVES*