AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1033440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033440 MtrunA17_Chr7g0256051 98.630 292 4 0 1 292 1 292 0.0 586
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033440 AT3G56740.1 73.379 293 77 1 1 292 1 293 3.72e-151 425
Msa1033440 AT2G41160.1 66.780 295 87 2 1 292 1 287 1.03e-139 395
Msa1033440 AT2G41160.2 69.325 163 50 0 1 163 1 163 3.20e-77 234

Find 113 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCACATTCACGTCGTTTC+TGG 0.121166 7_1:-68573272 None:intergenic
ACGAATTTCCTTGCCATCTA+TGG 0.140196 7_1:+68572974 Msa1033440:CDS
TTCCTTCCATAAACAAAATA+TGG 0.187431 7_1:+68573328 Msa1033440:three_prime_UTR
AACGGGAATGTCAGAGAAAA+AGG 0.225565 7_1:-68571977 None:intergenic
GTTTCTTACCGAGTGTTTAT+TGG 0.239336 7_1:-68569286 None:intergenic
TATTAACACCAGCACTAAAA+TGG 0.262768 7_1:-68573493 None:intergenic
TGTAGCTTCTACTGTCAAAA+TGG 0.265379 7_1:+68572152 Msa1033440:intron
TGTATCTGCTATATTACTTC+AGG 0.275704 7_1:+68569241 Msa1033440:CDS
TTAATAGATCAATGAGAATT+AGG 0.289480 7_1:+68573510 Msa1033440:three_prime_UTR
CACTCTGGGCTTGTCTTATC+AGG 0.296345 7_1:+68568348 Msa1033440:CDS
TAAACAAAATATGGATTGTT+TGG 0.299874 7_1:+68573337 Msa1033440:three_prime_UTR
TTGCTCTGGCAGGATATCTT+TGG 0.301829 7_1:+68569147 Msa1033440:intron
GAAGACATTCAAACGGTATA+AGG 0.315844 7_1:-68572218 None:intergenic
TTCCCGTTTCAACACGGTTC+CGG 0.316161 7_1:+68571992 Msa1033440:CDS
CATATATCTAGCTGGTCTTC+AGG 0.318381 7_1:+68572047 Msa1033440:CDS
TACAAATTACTTTAAACATA+TGG 0.321116 7_1:+68573540 Msa1033440:three_prime_UTR
CGTCGTTTCTGGCCTGCACT+AGG 0.335548 7_1:-68573261 None:intergenic
CTAGTCACTCCTGGACCTTA+TGG 0.354454 7_1:+68571931 Msa1033440:CDS
AATCACAACCCTTGTTTCAA+TGG 0.355279 7_1:+68573210 Msa1033440:CDS
GGGATGTGTGGCATCCTTGC+CGG 0.365193 7_1:+68572193 Msa1033440:CDS
CAAGTCTTGATGTGAGGATT+GGG 0.365948 7_1:+68573389 Msa1033440:three_prime_UTR
GTACAAATGAAGCAAATATA+AGG 0.367164 7_1:-68571954 None:intergenic
TCAACACCCGAGTTGATGTT+TGG 0.372056 7_1:+68569216 Msa1033440:CDS
AGGGTATTTGAGAGACAAAT+TGG 0.377821 7_1:+68569261 Msa1033440:CDS
ATCCGGAACCGTGTTGAAAC+GGG 0.381204 7_1:-68571994 None:intergenic
CTTGCCTCCATTTGGCGAGC+TGG 0.389639 7_1:-68573050 None:intergenic
TGAGAAGAATACCTTTCAAA+AGG 0.393420 7_1:-68569521 None:intergenic
ATAAAATTACCTTTGCTTTG+CGG 0.408479 7_1:-68572246 None:intergenic
AATCCGGAACCGTGTTGAAA+CGG 0.409263 7_1:-68571995 None:intergenic
AACAACAACGAGGAATGTTA+TGG 0.410813 7_1:+68573010 Msa1033440:CDS
ATGATGAAAGCCCTTGTAAC+AGG 0.411155 7_1:-68568277 None:intergenic
CGAATTTCCTTGCCATCTAT+GGG 0.414878 7_1:+68572975 Msa1033440:CDS
AAGATGAACGGAGGCCCATC+TGG 0.417863 7_1:+68568090 Msa1033440:exon
ATCACAACCCTTGTTTCAAT+GGG 0.418507 7_1:+68573211 Msa1033440:CDS
TCAACACGGTTCCGGATTTG+TGG 0.420358 7_1:+68572000 Msa1033440:CDS
TCTTTGGAAAGCTTCGCATA+TGG 0.424524 7_1:+68569163 Msa1033440:CDS
CGTTTGAATGAAAATTTGTT+CGG 0.428392 7_1:-68567996 None:intergenic
AAGTAAAACTTGCCTCCATT+TGG 0.437456 7_1:-68573058 None:intergenic
CCAAGGTCGTTTCAACACTC+TGG 0.455976 7_1:+68568333 Msa1033440:CDS
GAGTATTTCAACTCCTATTG+AGG 0.455983 7_1:+68573432 Msa1033440:three_prime_UTR
ACAAGTCTTGATGTGAGGAT+TGG 0.459176 7_1:+68573388 Msa1033440:three_prime_UTR
CAGCAAATGCTCCTGTTACA+AGG 0.460401 7_1:+68568266 Msa1033440:intron
GTATCTGCTATATTACTTCA+GGG 0.469006 7_1:+68569242 Msa1033440:CDS
TTGTTTATGGAAGGAATTAG+TGG 0.477540 7_1:-68573321 None:intergenic
TTGCCTCCATTTGGCGAGCT+GGG 0.478294 7_1:-68573049 None:intergenic
TTCTACTGTCAAAATGGAAA+AGG 0.478869 7_1:+68572158 Msa1033440:CDS
ATGTTTAAAGTAATTTGTAC+AGG 0.480336 7_1:-68573536 None:intergenic
ACAACAACGAGGAATGTTAT+GGG 0.480884 7_1:+68573011 Msa1033440:CDS
GAAGCAAATATAAGGCCATA+AGG 0.481302 7_1:-68571946 None:intergenic
TGGAAAAGGTCCATGTTACC+AGG 0.482508 7_1:+68572172 Msa1033440:CDS
ATCCTACCCAGCTCGCCAAA+TGG 0.485081 7_1:+68573043 Msa1033440:CDS
TTGTTTCAATGGGATTTGAC+AGG 0.492409 7_1:+68573221 Msa1033440:CDS
ATTCAAACGGTATAAGGAAC+CGG 0.492907 7_1:-68572212 None:intergenic
CTTTGTGCAGAGAAACTATC+CGG 0.494839 7_1:+68573150 Msa1033440:intron
CATAAGGTCCAGGAGTGACT+AGG 0.495943 7_1:-68571930 None:intergenic
GAGAAGAATACCTTTCAAAA+GGG 0.496921 7_1:-68569520 None:intergenic
GTGCGTGGAGTCCCCATAGA+TGG 0.497459 7_1:-68572987 None:intergenic
ACAATCTTCTTTGGGATCCA+AGG 0.509043 7_1:+68568316 Msa1033440:CDS
TTCTTCACTGCGAAGATGAA+CGG 0.509557 7_1:+68568078 Msa1033440:exon
CAAGGTCGTTTCAACACTCT+GGG 0.509561 7_1:+68568334 Msa1033440:CDS
AGAAGTGGAAACCACAAATC+CGG 0.517755 7_1:-68572011 None:intergenic
CTCCATTTGGCGAGCTGGGT+AGG 0.519162 7_1:-68573045 None:intergenic
TCAACAACCCTAGTCACTCC+TGG 0.520704 7_1:+68571922 Msa1033440:CDS
TGTGGCAACAAACATCCTAC+TGG 0.528754 7_1:+68573288 Msa1033440:CDS
GTCGTTTCTGGCCTGCACTA+GGG 0.529533 7_1:-68573260 None:intergenic
AAGAATGATGAAATGAACTC+CGG 0.532307 7_1:-68572948 None:intergenic
TGAATGACTTATCTGAGAAG+TGG 0.532500 7_1:-68572026 None:intergenic
TGTTTATGGAAGGAATTAGT+GGG 0.533877 7_1:-68573320 None:intergenic
ACTGCAGAATGCGTTGGAGC+CGG 0.536679 7_1:-68573169 None:intergenic
AGAATGATGAAATGAACTCC+GGG 0.548630 7_1:-68572947 None:intergenic
ATTTGGCGAGCTGGGTAGGA+TGG 0.551108 7_1:-68573041 None:intergenic
AAGTCATTCATATATCTAGC+TGG 0.554427 7_1:+68572039 Msa1033440:CDS
GCAAGGATGCCACACATCCC+TGG 0.554858 7_1:-68572190 None:intergenic
AGCAAATGCTCCTGTTACAA+GGG 0.557156 7_1:+68568267 Msa1033440:intron
GGAGTGACTAGGGTTGTTGA+AGG 0.558621 7_1:-68571919 None:intergenic
TCTTCGCAGTGAAGAAGAAG+AGG 0.563934 7_1:-68568071 None:intergenic
TTCCTCGTTGTTGTTGTGCG+TGG 0.564527 7_1:-68573002 None:intergenic
TGTCAAATCCCATTGAAACA+AGG 0.565140 7_1:-68573219 None:intergenic
AATATAAGGCCATAAGGTCC+AGG 0.569522 7_1:-68571940 None:intergenic
TGCCAGACAAGCCCTAGTGC+AGG 0.571319 7_1:+68573249 Msa1033440:CDS
CTGACATTCCCGTTTCAACA+CGG 0.572933 7_1:+68571986 Msa1033440:CDS
ATAAGGTCCAGGAGTGACTA+GGG 0.576095 7_1:-68571929 None:intergenic
TCCATGTTACCAGGGATGTG+TGG 0.577711 7_1:+68572181 Msa1033440:CDS
GTCAAATCCCATTGAAACAA+GGG 0.578126 7_1:-68573218 None:intergenic
GGCCAGAAACGACGTGAATG+TGG 0.583853 7_1:+68573270 Msa1033440:CDS
AAATAGTAGTGAGGATAACA+TGG 0.585490 7_1:-68569481 None:intergenic
GTTGTGATTGAGTCCTCTGA+TGG 0.587631 7_1:-68573196 None:intergenic
CCTCACATCAAGACTTGTTG+AGG 0.587775 7_1:-68573383 None:intergenic
AATAGGAGTTGAAATACTCA+AGG 0.594986 7_1:-68573428 None:intergenic
CTTCTATATCCGCAAAGCAA+AGG 0.596306 7_1:+68572237 Msa1033440:CDS
CAACTCGGGTGTTGATGTGA+AGG 0.600481 7_1:-68569208 None:intergenic
TGGAGTCCCCATAGATGGCA+AGG 0.600546 7_1:-68572982 None:intergenic
CCAGAGTGTTGAAACGACCT+TGG 0.608285 7_1:-68568333 None:intergenic
CTACCCAGCTCGCCAAATGG+AGG 0.609762 7_1:+68573046 Msa1033440:CDS
TACAATCCAAACATCAACTC+GGG 0.610315 7_1:-68569222 None:intergenic
ATGAACGTACTGAAACCAGA+TGG 0.615760 7_1:-68568105 None:intergenic
CATCAAGACTTGTTGAGGAG+TGG 0.616531 7_1:-68573378 None:intergenic
AAGTCTTGATGTGAGGATTG+GGG 0.637862 7_1:+68573390 Msa1033440:three_prime_UTR
AGTGGGACTGAGCCTCCAGT+AGG 0.638593 7_1:-68573303 None:intergenic
GGATATAGAAGACATTCAAA+CGG 0.639224 7_1:-68572225 None:intergenic
CCTCAACAAGTCTTGATGTG+AGG 0.639425 7_1:+68573383 Msa1033440:three_prime_UTR
TGAACGTACTGAAACCAGAT+GGG 0.647169 7_1:-68568104 None:intergenic
AATTGGTTCCAATAAACACT+CGG 0.650758 7_1:+68569278 Msa1033440:CDS
ATACAATCCAAACATCAACT+CGG 0.655682 7_1:-68569223 None:intergenic
GGAAAAGGTCCATGTTACCA+GGG 0.656589 7_1:+68572173 Msa1033440:CDS
AACTACTTCAAATAGTAGTG+AGG 0.659587 7_1:-68569490 None:intergenic
TTCTGCAGTAGAACCATCAG+AGG 0.659637 7_1:+68573183 Msa1033440:CDS
GAATTTCCTTGCCATCTATG+GGG 0.660257 7_1:+68572976 Msa1033440:CDS
AACGGTATAAGGAACCGGCA+AGG 0.663752 7_1:-68572207 None:intergenic
CAACAACGAGGAATGTTATG+GGG 0.670477 7_1:+68573012 Msa1033440:CDS
GGCAACAAACATCCTACTGG+AGG 0.680331 7_1:+68573291 Msa1033440:CDS
TTCACTGCGAAGATGAACGG+AGG 0.686461 7_1:+68568081 Msa1033440:exon
CTCCACGCACAACAACAACG+AGG 0.778347 7_1:+68573000 Msa1033440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTAACTAAACAAA+GGG - chr7_1:68568544-68568563 None:intergenic 10.0%
!!! TACTTTAATTCATATTTTTA+TGG + chr7_1:68570190-68570209 Msa1033440:intron 10.0%
!! ATATCTAAAAATTAAAGTTA+AGG - chr7_1:68573471-68573490 None:intergenic 10.0%
!! AAATTGAAAACAACAAAAAA+GGG - chr7_1:68568171-68568190 None:intergenic 15.0%
!! AAAATTGAAAACAACAAAAA+AGG - chr7_1:68568172-68568191 None:intergenic 15.0%
!! AAATTATTAACTAAACAAAG+GGG - chr7_1:68568543-68568562 None:intergenic 15.0%
!! CAAAATTATTAACTAAACAA+AGG - chr7_1:68568545-68568564 None:intergenic 15.0%
!!! AAACTTGTTAGTTTATATTT+AGG + chr7_1:68569305-68569324 Msa1033440:intron 15.0%
!! ATAGCAATTAGATATATAAA+AGG - chr7_1:68569392-68569411 None:intergenic 15.0%
!! GCATTAATATTTCATTTAAA+GGG - chr7_1:68569813-68569832 None:intergenic 15.0%
!! AGCATTAATATTTCATTTAA+AGG - chr7_1:68569814-68569833 None:intergenic 15.0%
!! ATGAAAATTTAAAGAGATAT+TGG + chr7_1:68570309-68570328 Msa1033440:intron 15.0%
!! TAATACTTAAAATACTGAAT+GGG + chr7_1:68570482-68570501 Msa1033440:intron 15.0%
!! CAATCAAATATATGTAAAAT+AGG + chr7_1:68570728-68570747 Msa1033440:intron 15.0%
!! TCATATAATTTGACATTAAT+TGG - chr7_1:68572399-68572418 None:intergenic 15.0%
!! TATTTGAAAGATTTCAAATT+TGG - chr7_1:68572622-68572641 None:intergenic 15.0%
!! TACAAATTACTTTAAACATA+TGG + chr7_1:68573540-68573559 Msa1033440:three_prime_UTR 15.0%
!!! TTTTGTTACAAAGTGTTTTT+TGG + chr7_1:68568189-68568208 Msa1033440:intron 20.0%
!! TGAAAAAGGAAAAATCAAAT+CGG - chr7_1:68568376-68568395 None:intergenic 20.0%
!!! CAAAAGCATTAAAATGAAAA+AGG - chr7_1:68568390-68568409 None:intergenic 20.0%
!! AATTATTAACTAAACAAAGG+GGG - chr7_1:68568542-68568561 None:intergenic 20.0%
!! CGTATAACTTAGTTAAAAAT+TGG - chr7_1:68568597-68568616 None:intergenic 20.0%
!!! TAAGTTATACGATTACTTTT+AGG + chr7_1:68568606-68568625 Msa1033440:intron 20.0%
!! GAAAAAGTTAAGTAAATCAA+CGG - chr7_1:68568804-68568823 None:intergenic 20.0%
!!! ATTTACTTAACTTTTTCTCT+TGG + chr7_1:68568807-68568826 Msa1033440:intron 20.0%
!!! GTATAAATGCTATGATTTTA+TGG + chr7_1:68568878-68568897 Msa1033440:intron 20.0%
!!! CTTGTTTTTAATTTACATTC+TGG + chr7_1:68568903-68568922 Msa1033440:intron 20.0%
!!! TATTCTAATTGTACCTTTTA+TGG + chr7_1:68569409-68569428 Msa1033440:intron 20.0%
!!! ATTCTAATTGTACCTTTTAT+GGG + chr7_1:68569410-68569429 Msa1033440:intron 20.0%
!! TTAATATTTCATTTAAAGGG+AGG - chr7_1:68569810-68569829 None:intergenic 20.0%
!! ATATGTAATTGTTAAGTAGT+TGG + chr7_1:68570030-68570049 Msa1033440:intron 20.0%
!!! ATTCATATTTTTATGGAAGA+AGG + chr7_1:68570197-68570216 Msa1033440:intron 20.0%
!!! ATTAATTTGATTTTAGACCA+AGG + chr7_1:68570257-68570276 Msa1033440:intron 20.0%
!! GTAATACTTAAAATACTGAA+TGG + chr7_1:68570481-68570500 Msa1033440:intron 20.0%
!! AATACTTAAAATACTGAATG+GGG + chr7_1:68570483-68570502 Msa1033440:intron 20.0%
!! AACAGAAAAGAGAAAAAATA+AGG - chr7_1:68570601-68570620 None:intergenic 20.0%
!! ATAGGATTTCTGTTTAATAA+CGG + chr7_1:68570796-68570815 Msa1033440:intron 20.0%
!! TTGGAGATAAAATAATTTCT+AGG + chr7_1:68571130-68571149 Msa1033440:intron 20.0%
!! TTAAAAAAATCAGTATCTAC+AGG - chr7_1:68571759-68571778 None:intergenic 20.0%
!!! GTTTCATTATCTTAGTTTTT+AGG + chr7_1:68572276-68572295 Msa1033440:intron 20.0%
!!! TTTTAGGAACTATGTTTTTA+TGG + chr7_1:68572292-68572311 Msa1033440:intron 20.0%
!! AATTCTGACTATATCTATAT+AGG - chr7_1:68572343-68572362 None:intergenic 20.0%
!! TAGAAGTTTGATATTAATGA+TGG - chr7_1:68572460-68572479 None:intergenic 20.0%
!! TTAAATATGCATCATATAGT+TGG - chr7_1:68572580-68572599 None:intergenic 20.0%
!!! CATATTTAAACATTGTTTCT+TGG + chr7_1:68572591-68572610 Msa1033440:intron 20.0%
!!! CTATACTATAACTCTTTTTA+TGG + chr7_1:68573086-68573105 Msa1033440:intron 20.0%
!!! AACAATCCATATTTTGTTTA+TGG - chr7_1:68573337-68573356 None:intergenic 20.0%
!!! TAAACAAAATATGGATTGTT+TGG + chr7_1:68573337-68573356 Msa1033440:three_prime_UTR 20.0%
!! TTAATAGATCAATGAGAATT+AGG + chr7_1:68573510-68573529 Msa1033440:three_prime_UTR 20.0%
!!! ATGTTTAAAGTAATTTGTAC+AGG - chr7_1:68573539-68573558 None:intergenic 20.0%
!! CGTTTGAATGAAAATTTGTT+CGG - chr7_1:68567999-68568018 None:intergenic 25.0%
! CAAAAAAGGGAAAAATGAAA+GGG - chr7_1:68568158-68568177 None:intergenic 25.0%
! ACAAAAAAGGGAAAAATGAA+AGG - chr7_1:68568159-68568178 None:intergenic 25.0%
! TTCAATGTAATCACATATGT+CGG - chr7_1:68568691-68568710 None:intergenic 25.0%
!!! TTTAATTTACATTCTGGTTC+AGG + chr7_1:68568909-68568928 Msa1033440:intron 25.0%
!! ATATTATAACTTGTAAGCAC+TGG + chr7_1:68569045-68569064 Msa1033440:intron 25.0%
!! TTCTAATTGTACCTTTTATG+GGG + chr7_1:68569411-68569430 Msa1033440:intron 25.0%
! ATATTTCAAAACCCCATAAA+AGG - chr7_1:68569425-68569444 None:intergenic 25.0%
! CAAAAATAGTCAAGAAAACT+CGG - chr7_1:68569669-68569688 None:intergenic 25.0%
!!! TAAATGGTTATCAGTTTTAG+AGG + chr7_1:68569782-68569801 Msa1033440:intron 25.0%
! AAAGCTGTTTAATGAAATTG+AGG + chr7_1:68570129-68570148 Msa1033440:intron 25.0%
! TAACAAGTAAATTACTTCTG+TGG - chr7_1:68570290-68570309 None:intergenic 25.0%
! CTTACAAATCAATAAGAACA+GGG - chr7_1:68570369-68570388 None:intergenic 25.0%
! TCTTACAAATCAATAAGAAC+AGG - chr7_1:68570370-68570389 None:intergenic 25.0%
! AAAATAAGGAAAGAATGTGA+AGG - chr7_1:68570587-68570606 None:intergenic 25.0%
! ATAGACTCTTATTGATCAAT+GGG - chr7_1:68570642-68570661 None:intergenic 25.0%
! AAAAACAAAATCTTGACCTT+TGG - chr7_1:68571007-68571026 None:intergenic 25.0%
! TCAATTTAGAAGAGATGAAT+TGG - chr7_1:68571037-68571056 None:intergenic 25.0%
! ACTCATTTGGTATTACAATA+TGG - chr7_1:68571255-68571274 None:intergenic 25.0%
! AAGCATAAGTTTATAATGCT+TGG - chr7_1:68571533-68571552 None:intergenic 25.0%
! GTACAAATGAAGCAAATATA+AGG - chr7_1:68571957-68571976 None:intergenic 25.0%
!!! ATTAGTTTTCATGAGTTGAA+TGG - chr7_1:68572122-68572141 None:intergenic 25.0%
! ATAAAATTACCTTTGCTTTG+CGG - chr7_1:68572249-68572268 None:intergenic 25.0%
! GAAGTATATCAATGAATGAA+TGG - chr7_1:68572515-68572534 None:intergenic 25.0%
! GATTCTTCATGAACATTTAT+AGG + chr7_1:68572745-68572764 Msa1033440:intron 25.0%
!! CATTTATAGGATTTAAGACT+AGG + chr7_1:68572758-68572777 Msa1033440:intron 25.0%
! TTCCTTCCATAAACAAAATA+TGG + chr7_1:68573328-68573347 Msa1033440:three_prime_UTR 25.0%
!!! ATCCATATTTTGTTTATGGA+AGG - chr7_1:68573333-68573352 None:intergenic 25.0%
!!! ATTGTTTGGAATTTTGATGA+TGG + chr7_1:68573351-68573370 Msa1033440:three_prime_UTR 25.0%
GTGTTTATGGTTCATAAGTT+AGG + chr7_1:68568751-68568770 Msa1033440:intron 30.0%
TTATCAGTGAACAAATCTGA+TGG + chr7_1:68568850-68568869 Msa1033440:intron 30.0%
TATCAGTGAACAAATCTGAT+GGG + chr7_1:68568851-68568870 Msa1033440:intron 30.0%
ATACAATCCAAACATCAACT+CGG - chr7_1:68569226-68569245 None:intergenic 30.0%
TGTATCTGCTATATTACTTC+AGG + chr7_1:68569241-68569260 Msa1033440:CDS 30.0%
GTATCTGCTATATTACTTCA+GGG + chr7_1:68569242-68569261 Msa1033440:CDS 30.0%
! AATTGGTTCCAATAAACACT+CGG + chr7_1:68569278-68569297 Msa1033440:CDS 30.0%
AAATAGTAGTGAGGATAACA+TGG - chr7_1:68569484-68569503 None:intergenic 30.0%
AACTACTTCAAATAGTAGTG+AGG - chr7_1:68569493-68569512 None:intergenic 30.0%
GAGAAGAATACCTTTCAAAA+GGG - chr7_1:68569523-68569542 None:intergenic 30.0%
TGAGAAGAATACCTTTCAAA+AGG - chr7_1:68569524-68569543 None:intergenic 30.0%
!! GAAAGGTATTCTTCTCAATT+TGG + chr7_1:68569527-68569546 Msa1033440:intron 30.0%
GAGATTGATCAAAGTTTAAG+AGG - chr7_1:68569571-68569590 None:intergenic 30.0%
GACATGCACATTCAAATATA+TGG - chr7_1:68569626-68569645 None:intergenic 30.0%
CACTTAACTGACATTTGAAA+AGG - chr7_1:68569745-68569764 None:intergenic 30.0%
TTTCAAATGTCAGTTAAGTG+TGG + chr7_1:68569745-68569764 Msa1033440:intron 30.0%
TAAAGGGCAAAAAACAACTT+GGG - chr7_1:68569924-68569943 None:intergenic 30.0%
TTAAAGGGCAAAAAACAACT+TGG - chr7_1:68569925-68569944 None:intergenic 30.0%
CTAGTGAATAGGCTATTAAA+GGG - chr7_1:68569940-68569959 None:intergenic 30.0%
TCTAGTGAATAGGCTATTAA+AGG - chr7_1:68569941-68569960 None:intergenic 30.0%
TAATAGCCTATTCACTAGAA+AGG + chr7_1:68569942-68569961 Msa1033440:intron 30.0%
! AAAAGTACACCCTTTATCTT+AGG + chr7_1:68569971-68569990 Msa1033440:intron 30.0%
AATTGTTAAGTAGTTGGACT+TGG + chr7_1:68570036-68570055 Msa1033440:intron 30.0%
GACTAGGTAATATACCTATT+GGG + chr7_1:68570058-68570077 Msa1033440:intron 30.0%
TCTATATCTCAATTCCCAAT+AGG - chr7_1:68570075-68570094 None:intergenic 30.0%
TTGGGAATTGAGATATAGAT+TGG + chr7_1:68570076-68570095 Msa1033440:intron 30.0%
!! AATTTGATTTTAGACCAAGG+AGG + chr7_1:68570260-68570279 Msa1033440:intron 30.0%
! TTTGTAAGAAGCATACAGAA+AGG + chr7_1:68570381-68570400 Msa1033440:intron 30.0%
AGTATGAAGAGAAATTCCAT+TGG + chr7_1:68570550-68570569 Msa1033440:intron 30.0%
GATAGACTCTTATTGATCAA+TGG - chr7_1:68570643-68570662 None:intergenic 30.0%
TTTGCAACATTGAGCATATT+TGG - chr7_1:68570866-68570885 None:intergenic 30.0%
AAATATGCTCAATGTTGCAA+AGG + chr7_1:68570865-68570884 Msa1033440:intron 30.0%
!! ATTTTAGTAGTTCCTTGACA+TGG + chr7_1:68570964-68570983 Msa1033440:intron 30.0%
! TTTTAGTAGTTCCTTGACAT+GGG + chr7_1:68570965-68570984 Msa1033440:intron 30.0%
TATGTATTCTTTAAGCCCAA+AGG + chr7_1:68571089-68571108 Msa1033440:intron 30.0%
ATGTATTCTTTAAGCCCAAA+GGG + chr7_1:68571090-68571109 Msa1033440:intron 30.0%
GCTCTTTAATAACACTCATT+TGG - chr7_1:68571268-68571287 None:intergenic 30.0%
TCGAATAGCAGTTATTATAG+CGG + chr7_1:68571379-68571398 Msa1033440:intron 30.0%
! CTATTAACATTGATGACTAG+CGG + chr7_1:68571404-68571423 Msa1033440:intron 30.0%
CTTTCTAAATGAAGACGATT+TGG - chr7_1:68571472-68571491 None:intergenic 30.0%
TTCATTTAGAAAGTCATCCA+AGG + chr7_1:68571479-68571498 Msa1033440:intron 30.0%
CAAATCCACAAAACAATCAT+TGG + chr7_1:68571612-68571631 Msa1033440:intron 30.0%
!! CATAACCAATGATTGTTTTG+TGG - chr7_1:68571620-68571639 None:intergenic 30.0%
! CAAAACAATCATTGGTTATG+AGG + chr7_1:68571620-68571639 Msa1033440:intron 30.0%
ATCCTATCAACAAGTTTGAA+TGG + chr7_1:68571648-68571667 Msa1033440:intron 30.0%
!! TACCATTCAAACTTGTTGAT+AGG - chr7_1:68571653-68571672 None:intergenic 30.0%
AATTCTTGCGTAATATGTGT+TGG - chr7_1:68571713-68571732 None:intergenic 30.0%
CATATTACGCAAGAATTTGA+TGG + chr7_1:68571716-68571735 Msa1033440:intron 30.0%
TTTGTGCACCTTGATATTTA+AGG + chr7_1:68571834-68571853 Msa1033440:intron 30.0%
GAACAGAACCTTAAATATCA+AGG - chr7_1:68571845-68571864 None:intergenic 30.0%
AAGTCATTCATATATCTAGC+TGG + chr7_1:68572039-68572058 Msa1033440:CDS 30.0%
TTCTACTGTCAAAATGGAAA+AGG + chr7_1:68572158-68572177 Msa1033440:CDS 30.0%
GGATATAGAAGACATTCAAA+CGG - chr7_1:68572228-68572247 None:intergenic 30.0%
ATGTTCATGAAGAATCATGA+TGG - chr7_1:68572741-68572760 None:intergenic 30.0%
!! CATTTAGTTTGCAGCTAAAT+GGG - chr7_1:68572793-68572812 None:intergenic 30.0%
AAGAATGATGAAATGAACTC+CGG - chr7_1:68572951-68572970 None:intergenic 30.0%
TGTTTATGGAAGGAATTAGT+GGG - chr7_1:68573323-68573342 None:intergenic 30.0%
TTGTTTATGGAAGGAATTAG+TGG - chr7_1:68573324-68573343 None:intergenic 30.0%
!!! TTTGGAATTTTGATGATGGA+AGG + chr7_1:68573355-68573374 Msa1033440:three_prime_UTR 30.0%
AATAGGAGTTGAAATACTCA+AGG - chr7_1:68573431-68573450 None:intergenic 30.0%
TGAGAAAAATGATCCTCAAT+AGG - chr7_1:68573448-68573467 None:intergenic 30.0%
!! AGATATATCCATTTTAGTGC+TGG + chr7_1:68573485-68573504 Msa1033440:three_prime_UTR 30.0%
TATTAACACCAGCACTAAAA+TGG - chr7_1:68573496-68573515 None:intergenic 30.0%
!! AGCTACGACTTTTTCTTCTT+CGG - chr7_1:68568049-68568068 None:intergenic 35.0%
GGTGTGTGAAAATTGAAGAA+GGG - chr7_1:68568137-68568156 None:intergenic 35.0%
! CGCTTTTCACAATCTTCTTT+GGG + chr7_1:68568308-68568327 Msa1033440:CDS 35.0%
CATAAACACAGACAAAGACA+CGG - chr7_1:68568740-68568759 None:intergenic 35.0%
TTTCTCTTGGAGTTGTAACA+AGG + chr7_1:68568820-68568839 Msa1033440:intron 35.0%
TTCTCTTGGAGTTGTAACAA+GGG + chr7_1:68568821-68568840 Msa1033440:intron 35.0%
TGTGAAAAATGTCAGAGTTC+CGG - chr7_1:68569076-68569095 None:intergenic 35.0%
TACAATCCAAACATCAACTC+GGG - chr7_1:68569225-68569244 None:intergenic 35.0%
! AGGGTATTTGAGAGACAAAT+TGG + chr7_1:68569261-68569280 Msa1033440:CDS 35.0%
GTTTCTTACCGAGTGTTTAT+TGG - chr7_1:68569289-68569308 None:intergenic 35.0%
ACATTACATCAGCAAGAACT+TGG - chr7_1:68569368-68569387 None:intergenic 35.0%
CAGAACAAGATGTCAATGAA+AGG + chr7_1:68569883-68569902 Msa1033440:intron 35.0%
ACAAGATGTCAATGAAAGGT+TGG + chr7_1:68569887-68569906 Msa1033440:intron 35.0%
CTCCTGAATCCTAAGATAAA+GGG - chr7_1:68569983-68570002 None:intergenic 35.0%
GGACTAGGTAATATACCTAT+TGG + chr7_1:68570057-68570076 Msa1033440:intron 35.0%
!! TAGATTGGTCTAGAAGAGAA+TGG + chr7_1:68570091-68570110 Msa1033440:intron 35.0%
CTAGAAGAGAATGGTATAAG+AGG + chr7_1:68570100-68570119 Msa1033440:intron 35.0%
TGAAAATGACTTGACCAACA+TGG + chr7_1:68570337-68570356 Msa1033440:intron 35.0%
GAAAATGACTTGACCAACAT+GGG + chr7_1:68570338-68570357 Msa1033440:intron 35.0%
! AAGAGTGTACTACAGAAAGA+AGG + chr7_1:68570440-68570459 Msa1033440:intron 35.0%
TACTACAGAAAGAAGGTGAA+GGG + chr7_1:68570447-68570466 Msa1033440:intron 35.0%
ATGAAGAGAAATTCCATTGG+AGG + chr7_1:68570553-68570572 Msa1033440:intron 35.0%
TGAAGAGAAATTCCATTGGA+GGG + chr7_1:68570554-68570573 Msa1033440:intron 35.0%
TGGAAGGCTCAAAACAATAA+AGG + chr7_1:68570682-68570701 Msa1033440:intron 35.0%
GGAAGGCTCAAAACAATAAA+GGG + chr7_1:68570683-68570702 Msa1033440:intron 35.0%
GAAGGCTCAAAACAATAAAG+GGG + chr7_1:68570684-68570703 Msa1033440:intron 35.0%
GTAAAATAGGATCGTGACTT+AGG + chr7_1:68570741-68570760 Msa1033440:intron 35.0%
!! ACTTAGGTTGAGAATACAAG+AGG + chr7_1:68570757-68570776 Msa1033440:intron 35.0%
!! CTTAGGTTGAGAATACAAGA+GGG + chr7_1:68570758-68570777 Msa1033440:intron 35.0%
!! TTAGGTTGAGAATACAAGAG+GGG + chr7_1:68570759-68570778 Msa1033440:intron 35.0%
TAAACAGAAATCCTATACCG+AGG - chr7_1:68570792-68570811 None:intergenic 35.0%
!! TTTGGTTGTTAGCTTTGTAC+TGG - chr7_1:68570848-68570867 None:intergenic 35.0%
! CAAAGGTGCAAATGTTACAA+TGG + chr7_1:68570882-68570901 Msa1033440:intron 35.0%
!! ATCAAGTGGGAAAGTACTAA+TGG + chr7_1:68570927-68570946 Msa1033440:intron 35.0%
TTTAGTAGTTCCTTGACATG+GGG + chr7_1:68570966-68570985 Msa1033440:intron 35.0%
TTTCATGTGAAAGACCCTTT+GGG - chr7_1:68571107-68571126 None:intergenic 35.0%
ATTTCATGTGAAAGACCCTT+TGG - chr7_1:68571108-68571127 None:intergenic 35.0%
AAAGGGTCTTTCACATGAAA+TGG + chr7_1:68571107-68571126 Msa1033440:intron 35.0%
GTGGTCTAAAGATGTTAGTT+AGG - chr7_1:68571162-68571181 None:intergenic 35.0%
TGAGATAAATGGAAATGTCG+TGG - chr7_1:68571181-68571200 None:intergenic 35.0%
TTCTCAGCTCTTGAGATAAA+TGG - chr7_1:68571192-68571211 None:intergenic 35.0%
!! TGGTTTGTTCAAATTCAGCT+AGG - chr7_1:68571308-68571327 None:intergenic 35.0%
CGTATCGAATTACAGTATCA+CGG - chr7_1:68571339-68571358 None:intergenic 35.0%
TTTAGAAAGTCATCCAAGGT+TGG + chr7_1:68571483-68571502 Msa1033440:intron 35.0%
CATTTGCACTGTAAAGAAGA+AGG - chr7_1:68571689-68571708 None:intergenic 35.0%
CTTCTTCTTTACAGTGCAAA+TGG + chr7_1:68571687-68571706 Msa1033440:intron 35.0%
GAAGCAAATATAAGGCCATA+AGG - chr7_1:68571949-68571968 None:intergenic 35.0%
TGAATGACTTATCTGAGAAG+TGG - chr7_1:68572029-68572048 None:intergenic 35.0%
AGGTTAGTACAGCTTAGTTA+TGG + chr7_1:68572067-68572086 Msa1033440:intron 35.0%
GGTTAGTACAGCTTAGTTAT+GGG + chr7_1:68572068-68572087 Msa1033440:intron 35.0%
! TTTCATGAGTTGAATGGTTC+TGG - chr7_1:68572116-68572135 None:intergenic 35.0%
TGTAGCTTCTACTGTCAAAA+TGG + chr7_1:68572152-68572171 Msa1033440:intron 35.0%
ATTCAAACGGTATAAGGAAC+CGG - chr7_1:68572215-68572234 None:intergenic 35.0%
GAAGACATTCAAACGGTATA+AGG - chr7_1:68572221-68572240 None:intergenic 35.0%
GATTAACATCGATGTTGAGT+TGG + chr7_1:68572428-68572447 Msa1033440:intron 35.0%
TATGCATCATATAGTTGGCA+TGG - chr7_1:68572575-68572594 None:intergenic 35.0%
TTCTGAGTGCATTAGTTGAT+AGG + chr7_1:68572660-68572679 Msa1033440:intron 35.0%
!! GCATTTAGTTTGCAGCTAAA+TGG - chr7_1:68572794-68572813 None:intergenic 35.0%
AGAATGATGAAATGAACTCC+GGG - chr7_1:68572950-68572969 None:intergenic 35.0%
AACAACAACGAGGAATGTTA+TGG + chr7_1:68573010-68573029 Msa1033440:CDS 35.0%
ACAACAACGAGGAATGTTAT+GGG + chr7_1:68573011-68573030 Msa1033440:CDS 35.0%
AAGTAAAACTTGCCTCCATT+TGG - chr7_1:68573061-68573080 None:intergenic 35.0%
! AATCACAACCCTTGTTTCAA+TGG + chr7_1:68573210-68573229 Msa1033440:CDS 35.0%
! ATCACAACCCTTGTTTCAAT+GGG + chr7_1:68573211-68573230 Msa1033440:CDS 35.0%
GTCAAATCCCATTGAAACAA+GGG - chr7_1:68573221-68573240 None:intergenic 35.0%
TGTCAAATCCCATTGAAACA+AGG - chr7_1:68573222-68573241 None:intergenic 35.0%
TTGTTTCAATGGGATTTGAC+AGG + chr7_1:68573221-68573240 Msa1033440:CDS 35.0%
GAGTATTTCAACTCCTATTG+AGG + chr7_1:68573432-68573451 Msa1033440:three_prime_UTR 35.0%
TTCTTCACTGCGAAGATGAA+CGG + chr7_1:68568078-68568097 Msa1033440:exon 40.0%
TGAACGTACTGAAACCAGAT+GGG - chr7_1:68568107-68568126 None:intergenic 40.0%
ATGAACGTACTGAAACCAGA+TGG - chr7_1:68568108-68568127 None:intergenic 40.0%
GGGTGTGTGAAAATTGAAGA+AGG - chr7_1:68568138-68568157 None:intergenic 40.0%
AGCAAATGCTCCTGTTACAA+GGG + chr7_1:68568267-68568286 Msa1033440:intron 40.0%
ATGATGAAAGCCCTTGTAAC+AGG - chr7_1:68568280-68568299 None:intergenic 40.0%
! GCGCTTTTCACAATCTTCTT+TGG + chr7_1:68568307-68568326 Msa1033440:CDS 40.0%
!! ACAATCTTCTTTGGGATCCA+AGG + chr7_1:68568316-68568335 Msa1033440:CDS 40.0%
TCATGTCATTGTCTCGAATC+CGG + chr7_1:68568711-68568730 Msa1033440:intron 40.0%
CGTGTCTTTGTCTGTGTTTA+TGG + chr7_1:68568738-68568757 Msa1033440:intron 40.0%
CTTATCTCACTAAGTGTGGT+TGG - chr7_1:68568968-68568987 None:intergenic 40.0%
CAACCACACTTAGTGAGATA+AGG + chr7_1:68568966-68568985 Msa1033440:intron 40.0%
! AAGCCTTATCTCACTAAGTG+TGG - chr7_1:68568972-68568991 None:intergenic 40.0%
ACACTTAGTGAGATAAGGCT+TGG + chr7_1:68568971-68568990 Msa1033440:intron 40.0%
! TCTTTGGAAAGCTTCGCATA+TGG + chr7_1:68569163-68569182 Msa1033440:CDS 40.0%
TCAGTTAAGTGTGGATCACA+CGG + chr7_1:68569754-68569773 Msa1033440:intron 40.0%
AACTTCCGTGAGGATAAAGA+GGG + chr7_1:68569846-68569865 Msa1033440:intron 40.0%
CTTTACCCTCTTTATCCTCA+CGG - chr7_1:68569854-68569873 None:intergenic 40.0%
GGATAAAGAGGGTAAAGTCT+TGG + chr7_1:68569857-68569876 Msa1033440:intron 40.0%
TAGCCTATTCACTAGAAAGG+AGG + chr7_1:68569945-68569964 Msa1033440:intron 40.0%
! AGACCTCCTTTCTAGTGAAT+AGG - chr7_1:68569951-68569970 None:intergenic 40.0%
CACCCTTTATCTTAGGATTC+AGG + chr7_1:68569978-68569997 Msa1033440:intron 40.0%
CCTCCTGAATCCTAAGATAA+AGG - chr7_1:68569984-68570003 None:intergenic 40.0%
CCTTTATCTTAGGATTCAGG+AGG + chr7_1:68569981-68570000 Msa1033440:intron 40.0%
TAAGTAGTTGGACTTGGACT+AGG + chr7_1:68570042-68570061 Msa1033440:intron 40.0%
!! AGCATACAGAAAGGTGTTGT+TGG + chr7_1:68570390-68570409 Msa1033440:intron 40.0%
GTACTACAGAAAGAAGGTGA+AGG + chr7_1:68570446-68570465 Msa1033440:intron 40.0%
! TAGGTTGAGAATACAAGAGG+GGG + chr7_1:68570760-68570779 Msa1033440:intron 40.0%
ACTGCAACAATAGGATCAAG+TGG + chr7_1:68570913-68570932 Msa1033440:intron 40.0%
CTGCAACAATAGGATCAAGT+GGG + chr7_1:68570914-68570933 Msa1033440:intron 40.0%
! GCTGCAATCTGTTTTACCAA+AGG + chr7_1:68570988-68571007 Msa1033440:intron 40.0%
GGTCTTTCACATGAAATGGT+TGG + chr7_1:68571111-68571130 Msa1033440:intron 40.0%
AAGAGCTGAGAATATTCAGC+TGG + chr7_1:68571200-68571219 Msa1033440:intron 40.0%
ACAGTATCACGGAACAGTAA+TGG - chr7_1:68571328-68571347 None:intergenic 40.0%
TTGTCGATCGCAGAAAATAG+TGG - chr7_1:68571442-68571461 None:intergenic 40.0%
AAAGTCATCCAAGGTTGGAA+AGG + chr7_1:68571488-68571507 Msa1033440:intron 40.0%
AACATTGAATGCTGAGACCA+GGG - chr7_1:68571568-68571587 None:intergenic 40.0%
! TACGCAAGAATTTGATGGCA+TGG + chr7_1:68571721-68571740 Msa1033440:intron 40.0%
AATATAAGGCCATAAGGTCC+AGG - chr7_1:68571943-68571962 None:intergenic 40.0%
ACGGGAATGTCAGAGAAAAA+GGG - chr7_1:68571979-68571998 None:intergenic 40.0%
AACGGGAATGTCAGAGAAAA+AGG - chr7_1:68571980-68571999 None:intergenic 40.0%
AGAAGTGGAAACCACAAATC+CGG - chr7_1:68572014-68572033 None:intergenic 40.0%
!! CATATATCTAGCTGGTCTTC+AGG + chr7_1:68572047-68572066 Msa1033440:CDS 40.0%
CTTCTATATCCGCAAAGCAA+AGG + chr7_1:68572237-68572256 Msa1033440:CDS 40.0%
CTATATAGGCGCATTCCTTT+GGG - chr7_1:68572329-68572348 None:intergenic 40.0%
TCTATATAGGCGCATTCCTT+TGG - chr7_1:68572330-68572349 None:intergenic 40.0%
! TAGTTTGCAGCTAAATGGGA+AGG - chr7_1:68572789-68572808 None:intergenic 40.0%
TGAACCTACATTACAGTTCC+CGG + chr7_1:68572929-68572948 Msa1033440:intron 40.0%
CAACAACGAGGAATGTTATG+GGG + chr7_1:68573012-68573031 Msa1033440:CDS 40.0%
!!! CTTTTTTGACTCACTGAGCA+TGG + chr7_1:68573124-68573143 Msa1033440:intron 40.0%
CTTTGTGCAGAGAAACTATC+CGG + chr7_1:68573150-68573169 Msa1033440:intron 40.0%
ACAAGTCTTGATGTGAGGAT+TGG + chr7_1:68573388-68573407 Msa1033440:three_prime_UTR 40.0%
CAAGTCTTGATGTGAGGATT+GGG + chr7_1:68573389-68573408 Msa1033440:three_prime_UTR 40.0%
AAGTCTTGATGTGAGGATTG+GGG + chr7_1:68573390-68573409 Msa1033440:three_prime_UTR 40.0%
TCTTCGCAGTGAAGAAGAAG+AGG - chr7_1:68568074-68568093 None:intergenic 45.0%
CAGCAAATGCTCCTGTTACA+AGG + chr7_1:68568266-68568285 Msa1033440:intron 45.0%
CAAGGTCGTTTCAACACTCT+GGG + chr7_1:68568334-68568353 Msa1033440:CDS 45.0%
TGGTTCAGGATAGAACACTG+TGG + chr7_1:68568923-68568942 Msa1033440:intron 45.0%
ACTAAGTGTGGTTGGCAACA+TGG - chr7_1:68568960-68568979 None:intergenic 45.0%
!! CTTGTAAGCACTGGAAACAC+CGG + chr7_1:68569054-68569073 Msa1033440:intron 45.0%
! GAGTTGTGTTGTTCTTGCTC+TGG + chr7_1:68569133-68569152 Msa1033440:intron 45.0%
TTGCTCTGGCAGGATATCTT+TGG + chr7_1:68569147-68569166 Msa1033440:intron 45.0%
!! TCAACACCCGAGTTGATGTT+TGG + chr7_1:68569216-68569235 Msa1033440:CDS 45.0%
! GTTGCTGTAGCCCTTTTGAA+AGG + chr7_1:68569510-68569529 Msa1033440:CDS 45.0%
CAGTTAAGTGTGGATCACAC+GGG + chr7_1:68569755-68569774 Msa1033440:intron 45.0%
GGATCACACGGGATGATAAA+TGG + chr7_1:68569766-68569785 Msa1033440:intron 45.0%
CACATCTTTGAACTTCCGTG+AGG + chr7_1:68569836-68569855 Msa1033440:intron 45.0%
GAACTTCCGTGAGGATAAAG+AGG + chr7_1:68569845-68569864 Msa1033440:intron 45.0%
TATCTTAGGATTCAGGAGGC+TGG + chr7_1:68569985-68570004 Msa1033440:intron 45.0%
ATCTTAGGATTCAGGAGGCT+GGG + chr7_1:68569986-68570005 Msa1033440:intron 45.0%
ATGTATGACGAGTGAGAGTG+AGG + chr7_1:68570161-68570180 Msa1033440:intron 45.0%
TGTATGACGAGTGAGAGTGA+GGG + chr7_1:68570162-68570181 Msa1033440:intron 45.0%
!! AAGGTGTTGTTGGCGATCAA+CGG + chr7_1:68570400-68570419 Msa1033440:intron 45.0%
TGAATGGGGAGCAGAAGTTA+GGG + chr7_1:68570497-68570516 Msa1033440:intron 45.0%
GAAGGCTATTTACCCTCCAA+TGG - chr7_1:68570569-68570588 None:intergenic 45.0%
!! CAGTGCCAACAGAGGTATTA+TGG + chr7_1:68570662-68570681 Msa1033440:intron 45.0%
!! GCCAACAGAGGTATTATGGA+AGG + chr7_1:68570666-68570685 Msa1033440:intron 45.0%
GCCTTCCATAATACCTCTGT+TGG - chr7_1:68570670-68570689 None:intergenic 45.0%
GAAATCCTATACCGAGGAAG+TGG - chr7_1:68570786-68570805 None:intergenic 45.0%
GACAAGTGCACTGCAACAAT+AGG + chr7_1:68570904-68570923 Msa1033440:intron 45.0%
AATTCAGACGCATTGTGCAG+TGG + chr7_1:68571056-68571075 Msa1033440:intron 45.0%
ACACACAACCTTTCCAACCT+TGG - chr7_1:68571499-68571518 None:intergenic 45.0%
GAACATTGAATGCTGAGACC+AGG - chr7_1:68571569-68571588 None:intergenic 45.0%
TGCACTGTAAAGAAGAAGGC+AGG - chr7_1:68571685-68571704 None:intergenic 45.0%
ATAAGGTCCAGGAGTGACTA+GGG - chr7_1:68571932-68571951 None:intergenic 45.0%
CTGACATTCCCGTTTCAACA+CGG + chr7_1:68571986-68572005 Msa1033440:CDS 45.0%
AATCCGGAACCGTGTTGAAA+CGG - chr7_1:68571998-68572017 None:intergenic 45.0%
!! GAGTTGAATGGTTCTGGACA+TGG - chr7_1:68572110-68572129 None:intergenic 45.0%
TGGAAAAGGTCCATGTTACC+AGG + chr7_1:68572172-68572191 Msa1033440:CDS 45.0%
GGAAAAGGTCCATGTTACCA+GGG + chr7_1:68572173-68572192 Msa1033440:CDS 45.0%
ATGGACACAAGCTTTCCCAA+AGG + chr7_1:68572311-68572330 Msa1033440:intron 45.0%
GCATGAGTGAATTGTCACGT+GGG - chr7_1:68572694-68572713 None:intergenic 45.0%
TGCATGAGTGAATTGTCACG+TGG - chr7_1:68572695-68572714 None:intergenic 45.0%
AACTCCGGGAACTGTAATGT+AGG - chr7_1:68572936-68572955 None:intergenic 45.0%
TTCTGCAGTAGAACCATCAG+AGG + chr7_1:68573183-68573202 Msa1033440:CDS 45.0%
GTTGTGATTGAGTCCTCTGA+TGG - chr7_1:68573199-68573218 None:intergenic 45.0%
TGTGGCAACAAACATCCTAC+TGG + chr7_1:68573288-68573307 Msa1033440:CDS 45.0%
!! CATCAAGACTTGTTGAGGAG+TGG - chr7_1:68573381-68573400 None:intergenic 45.0%
!! CCTCACATCAAGACTTGTTG+AGG - chr7_1:68573386-68573405 None:intergenic 45.0%
CCTCAACAAGTCTTGATGTG+AGG + chr7_1:68573383-68573402 Msa1033440:three_prime_UTR 45.0%
TTCACTGCGAAGATGAACGG+AGG + chr7_1:68568081-68568100 Msa1033440:exon 50.0%
!! CCAGAGTGTTGAAACGACCT+TGG - chr7_1:68568336-68568355 None:intergenic 50.0%
CCAAGGTCGTTTCAACACTC+TGG + chr7_1:68568333-68568352 Msa1033440:CDS 50.0%
CACTCTGGGCTTGTCTTATC+AGG + chr7_1:68568348-68568367 Msa1033440:CDS 50.0%
GCTTCGACACCTCTAATCGT+AGG + chr7_1:68568635-68568654 Msa1033440:intron 50.0%
ACAGACAAAGACACGGACAC+CGG - chr7_1:68568733-68568752 None:intergenic 50.0%
! TGTGTTGTTCTTGCTCTGGC+AGG + chr7_1:68569137-68569156 Msa1033440:intron 50.0%
!! CAACTCGGGTGTTGATGTGA+AGG - chr7_1:68569211-68569230 None:intergenic 50.0%
! ATGTGACGCACTCTTTTCGC+AGG + chr7_1:68569443-68569462 Msa1033440:intron 50.0%
TCTTAGGATTCAGGAGGCTG+GGG + chr7_1:68569987-68570006 Msa1033440:intron 50.0%
ACTTCTGTGGTCAACCTCCT+TGG - chr7_1:68570277-68570296 None:intergenic 50.0%
GAACAGGGTTTGACCCATGT+TGG - chr7_1:68570354-68570373 None:intergenic 50.0%
!! AGGTGTTGTTGGCGATCAAC+GGG + chr7_1:68570401-68570420 Msa1033440:intron 50.0%
CACTCTTAACAACAGCCCCT+GGG - chr7_1:68570427-68570446 None:intergenic 50.0%
ACACTCTTAACAACAGCCCC+TGG - chr7_1:68570428-68570447 None:intergenic 50.0%
CTGAATGGGGAGCAGAAGTT+AGG + chr7_1:68570496-68570515 Msa1033440:intron 50.0%
GAGTCTATCAGTGCCAACAG+AGG + chr7_1:68570654-68570673 Msa1033440:intron 50.0%
TGCTTCAAATCCAGACACCC+TGG + chr7_1:68571548-68571567 Msa1033440:intron 50.0%
GGAGTGACTAGGGTTGTTGA+AGG - chr7_1:68571922-68571941 None:intergenic 50.0%
TCAACAACCCTAGTCACTCC+TGG + chr7_1:68571922-68571941 Msa1033440:CDS 50.0%
CATAAGGTCCAGGAGTGACT+AGG - chr7_1:68571933-68571952 None:intergenic 50.0%
CTAGTCACTCCTGGACCTTA+TGG + chr7_1:68571931-68571950 Msa1033440:CDS 50.0%
TTCCCGTTTCAACACGGTTC+CGG + chr7_1:68571992-68572011 Msa1033440:CDS 50.0%
ATCCGGAACCGTGTTGAAAC+GGG - chr7_1:68571997-68572016 None:intergenic 50.0%
TCAACACGGTTCCGGATTTG+TGG + chr7_1:68572000-68572019 Msa1033440:CDS 50.0%
TCCATGTTACCAGGGATGTG+TGG + chr7_1:68572181-68572200 Msa1033440:CDS 50.0%
AACGGTATAAGGAACCGGCA+AGG - chr7_1:68572210-68572229 None:intergenic 50.0%
! TTCCTCGTTGTTGTTGTGCG+TGG - chr7_1:68573005-68573024 None:intergenic 50.0%
GGTTCTACTGCAGAATGCGT+TGG - chr7_1:68573178-68573197 None:intergenic 50.0%
TGCCACATTCACGTCGTTTC+TGG - chr7_1:68573275-68573294 None:intergenic 50.0%
GGCAACAAACATCCTACTGG+AGG + chr7_1:68573291-68573310 Msa1033440:CDS 50.0%
AAGATGAACGGAGGCCCATC+TGG + chr7_1:68568090-68568109 Msa1033440:exon 55.0%
CGTGACACGCCTACGATTAG+AGG - chr7_1:68568647-68568666 None:intergenic 55.0%
TGGGGAGCAGAAGTTAGGGT+AGG + chr7_1:68570501-68570520 Msa1033440:intron 55.0%
CAGATTGCAGCCCCATGTCA+AGG - chr7_1:68570979-68570998 None:intergenic 55.0%
! AATGCTGAGACCAGGGTGTC+TGG - chr7_1:68571561-68571580 None:intergenic 55.0%
GCCACACATCCCTGGTAACA+TGG - chr7_1:68572185-68572204 None:intergenic 55.0%
CTCCACGCACAACAACAACG+AGG + chr7_1:68573000-68573019 Msa1033440:CDS 55.0%
ATTTGGCGAGCTGGGTAGGA+TGG - chr7_1:68573044-68573063 None:intergenic 55.0%
ATCCTACCCAGCTCGCCAAA+TGG + chr7_1:68573043-68573062 Msa1033440:CDS 55.0%
TTGCCTCCATTTGGCGAGCT+GGG - chr7_1:68573052-68573071 None:intergenic 55.0%
ACTGCAGAATGCGTTGGAGC+CGG - chr7_1:68573172-68573191 None:intergenic 55.0%
!! GTCGTTTCTGGCCTGCACTA+GGG - chr7_1:68573263-68573282 None:intergenic 55.0%
GGCCAGAAACGACGTGAATG+TGG + chr7_1:68573270-68573289 Msa1033440:CDS 55.0%
ACAAGAGGGGGCCACTTCCT+CGG + chr7_1:68570772-68570791 Msa1033440:intron 60.0%
GCAAGGATGCCACACATCCC+TGG - chr7_1:68572193-68572212 None:intergenic 60.0%
GGGATGTGTGGCATCCTTGC+CGG + chr7_1:68572193-68572212 Msa1033440:CDS 60.0%
CTCCATTTGGCGAGCTGGGT+AGG - chr7_1:68573048-68573067 None:intergenic 60.0%
CTACCCAGCTCGCCAAATGG+AGG + chr7_1:68573046-68573065 Msa1033440:CDS 60.0%
CTTGCCTCCATTTGGCGAGC+TGG - chr7_1:68573053-68573072 None:intergenic 60.0%
TGCCAGACAAGCCCTAGTGC+AGG + chr7_1:68573249-68573268 Msa1033440:CDS 60.0%
!! CGTCGTTTCTGGCCTGCACT+AGG - chr7_1:68573264-68573283 None:intergenic 60.0%
AGTGGGACTGAGCCTCCAGT+AGG - chr7_1:68573306-68573325 None:intergenic 60.0%
TGTTGGCGATCAACGGGCCC+AGG + chr7_1:68570407-68570426 Msa1033440:intron 65.0%
GTTGGCGATCAACGGGCCCA+GGG + chr7_1:68570408-68570427 Msa1033440:intron 65.0%
TTGGCGATCAACGGGCCCAG+GGG + chr7_1:68570409-68570428 Msa1033440:intron 65.0%
GGGGGCCACTTCCTCGGTAT+AGG + chr7_1:68570778-68570797 Msa1033440:intron 65.0%
GGCCTGCACTAGGGCTTGTC+TGG - chr7_1:68573254-68573273 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 68567990 68573576 68567990 ID=Msa1033440;Name=Msa1033440
chr7_1 mRNA 68567990 68573576 68567990 ID=Msa1033440-mRNA-1;Parent=Msa1033440;Name=Msa1033440-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|1|1|8|249|292
chr7_1 exon 68567990 68568117 68567990 ID=Msa1033440-mRNA-1:exon:16016;Parent=Msa1033440-mRNA-1
chr7_1 exon 68568269 68568369 68568269 ID=Msa1033440-mRNA-1:exon:16017;Parent=Msa1033440-mRNA-1
chr7_1 exon 68569159 68569299 68569159 ID=Msa1033440-mRNA-1:exon:16018;Parent=Msa1033440-mRNA-1
chr7_1 exon 68569465 68569531 68569465 ID=Msa1033440-mRNA-1:exon:16019;Parent=Msa1033440-mRNA-1
chr7_1 exon 68571917 68572068 68571917 ID=Msa1033440-mRNA-1:exon:16020;Parent=Msa1033440-mRNA-1
chr7_1 exon 68572157 68572258 68572157 ID=Msa1033440-mRNA-1:exon:16021;Parent=Msa1033440-mRNA-1
chr7_1 exon 68572945 68573067 68572945 ID=Msa1033440-mRNA-1:exon:16022;Parent=Msa1033440-mRNA-1
chr7_1 exon 68573160 68573576 68573160 ID=Msa1033440-mRNA-1:exon:16023;Parent=Msa1033440-mRNA-1
chr7_1 five_prime_UTR 68567990 68568092 68567990 ID=Msa1033440-mRNA-1:five_prime_utr;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68568093 68568117 68568093 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68568269 68568369 68568269 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68569159 68569299 68569159 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68569465 68569531 68569465 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68571917 68572068 68571917 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68572157 68572258 68572157 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68572945 68573067 68572945 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 CDS 68573160 68573327 68573160 ID=Msa1033440-mRNA-1:cds;Parent=Msa1033440-mRNA-1
chr7_1 three_prime_UTR 68573328 68573576 68573328 ID=Msa1033440-mRNA-1:three_prime_utr;Parent=Msa1033440-mRNA-1
Gene Sequence

>Msa1033440

ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTTACAAGGGCTTTCATCATCGCTTCAGCGCTTTTCACAATCTTCTTTGGGATCCAAGGTCGTTTCAACACTCTGGGCTTGTCTTATCAGGATATCTTTGGAAAGCTTCGCATATGGAAGTTGATCATGTCTGTATTTTCCTTCACATCAACACCCGAGTTGATGTTTGGATTGTATCTGCTATATTACTTCAGGGTATTTGAGAGACAAATTGGTTCCAATAAACACTCGGTGTTTATTGTGTTCTCCATGTTATCCTCACTACTATTTGAAGTAGTTGCTGTAGCCCTTTTGAAAGATCCTTCAACAACCCTAGTCACTCCTGGACCTTATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTCTGACATTCCCGTTTCAACACGGTTCCGGATTTGTGGTTTCCACTTCTCAGATAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTACTGTCAAAATGGAAAAGGTCCATGTTACCAGGGATGTGTGGCATCCTTGCCGGTTCCTTATACCGTTTGAATGTCTTCTATATCCGCAAAGCAAAGTTCCCGGAGTTCATTTCATCATTCTTTTCACGAATTTCCTTGCCATCTATGGGGACTCCACGCACAACAACAACGAGGAATGTTATGGGGAATGTACCATCCTACCCAGCTCGCCAAATGGAGAGAAACTATCCGGCTCCAACGCATTCTGCAGTAGAACCATCAGAGGACTCAATCACAACCCTTGTTTCAATGGGATTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAACGACGTGAATGTGGCAACAAACATCCTACTGGAGGCTCAGTCCCACTAA

Protein sequence

>Msa1033440

MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFTSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLSSLLFEVVAVALLKDPSTTLVTPGPYGLIFASFVPFFSDIPVSTRFRICGFHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGTPRTTTTRNVMGNVPSYPARQMERNYPAPTHSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH*