AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1073110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073110 MtrunA17_Chr7g0256051 95.205 292 4 1 1 282 1 292 0.0 556
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073110 AT3G56740.1 72.696 293 69 2 1 282 1 293 4.39e-147 414
Msa1073110 AT2G41160.1 67.596 287 88 1 1 282 1 287 4.45e-139 394
Msa1073110 AT2G41160.2 69.325 163 50 0 1 163 1 163 3.11e-77 234

Find 106 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCACATTCACGTCGTTTC+TGG 0.121166 7_2:+70467521 None:intergenic
ACGAATTTCCTTGCCATCTA+TGG 0.140196 7_2:-70467819 Msa1073110:CDS
TTCCTTCCATAAACAAAATA+TGG 0.187431 7_2:-70467465 Msa1073110:three_prime_UTR
AACGGGAATGTCAGAGAAAA+AGG 0.225565 7_2:+70468816 None:intergenic
GTTTCTTACCGAGTGTTTAT+TGG 0.239336 7_2:+70471507 None:intergenic
TATTAACACCAGCACTAAAA+TGG 0.262768 7_2:+70467300 None:intergenic
TGTAGCTTCTACTGTCAAAA+TGG 0.265379 7_2:-70468641 Msa1073110:intron
TGTATCTGCTATATTACTTC+AGG 0.275704 7_2:-70471552 Msa1073110:CDS
TTAATAGATCAATGAGAATT+AGG 0.289480 7_2:-70467283 Msa1073110:three_prime_UTR
CACTCTGGGCTTGTCTTATC+AGG 0.296345 7_2:-70472445 Msa1073110:intron
TAAACAAAATATGGATTGTT+TGG 0.299874 7_2:-70467456 Msa1073110:three_prime_UTR
TTGCTCTGGCAGGATATCTT+TGG 0.301829 7_2:-70471646 Msa1073110:intron
GAAGACATTCAAACGGTATA+AGG 0.315844 7_2:+70468575 None:intergenic
TTCCCGTTTCAACACGGTTC+CGG 0.316161 7_2:-70468801 Msa1073110:CDS
CATATATCTAGCTGGTCTTC+AGG 0.318381 7_2:-70468746 Msa1073110:intron
TACAAATTACTTTAAACATA+TGG 0.321116 7_2:-70467253 Msa1073110:three_prime_UTR
CGTCGTTTCTGGCCTGCACT+AGG 0.335548 7_2:+70467532 None:intergenic
CTAGTCACTCCTGGACCTTA+TGG 0.354454 7_2:-70468862 Msa1073110:CDS
AATCACAACCCTTGTTTCAA+TGG 0.355279 7_2:-70467583 Msa1073110:CDS
GGGATGTGTGGCATCCTTGC+CGG 0.365193 7_2:-70468600 Msa1073110:CDS
CAAGTCTTGATGTGAGGATT+GGG 0.365948 7_2:-70467404 Msa1073110:three_prime_UTR
GTACAAATGAAGCAAATATA+AGG 0.367164 7_2:+70468839 None:intergenic
TCAACACCCGAGTTGATGTT+TGG 0.372056 7_2:-70471577 Msa1073110:CDS
AGGGTATTTGAGAGACAAAT+TGG 0.377821 7_2:-70471532 Msa1073110:CDS
ATCCGGAACCGTGTTGAAAC+GGG 0.381204 7_2:+70468799 None:intergenic
TGAGAAGAATACCTTTCAAA+AGG 0.393420 7_2:+70471272 None:intergenic
ATAAAATTACCTTTGCTTTG+CGG 0.408479 7_2:+70468547 None:intergenic
AATCCGGAACCGTGTTGAAA+CGG 0.409263 7_2:+70468798 None:intergenic
AACAACAACGAGGAATGTTA+TGG 0.410813 7_2:-70467783 Msa1073110:CDS
ATGATGAAAGCCCTTGTAAC+AGG 0.411155 7_2:+70472516 None:intergenic
CGAATTTCCTTGCCATCTAT+GGG 0.414878 7_2:-70467818 Msa1073110:CDS
AAGATGAACGGAGGCCCATC+TGG 0.417863 7_2:-70472703 Msa1073110:CDS
ATCACAACCCTTGTTTCAAT+GGG 0.418507 7_2:-70467582 Msa1073110:CDS
TCAACACGGTTCCGGATTTG+TGG 0.420358 7_2:-70468793 Msa1073110:CDS
TCTTTGGAAAGCTTCGCATA+TGG 0.424524 7_2:-70471630 Msa1073110:CDS
CGTTTGAATGAAAATTTGTT+CGG 0.428392 7_2:+70472797 None:intergenic
CCAAGGTCGTTTCAACACTC+TGG 0.455976 7_2:-70472460 Msa1073110:CDS
GAGTATTTCAACTCCTATTG+AGG 0.455983 7_2:-70467361 Msa1073110:three_prime_UTR
ACAAGTCTTGATGTGAGGAT+TGG 0.459176 7_2:-70467405 Msa1073110:three_prime_UTR
CAGCAAATGCTCCTGTTACA+AGG 0.460401 7_2:-70472527 Msa1073110:CDS
GTATCTGCTATATTACTTCA+GGG 0.469006 7_2:-70471551 Msa1073110:CDS
TTGTTTATGGAAGGAATTAG+TGG 0.477540 7_2:+70467472 None:intergenic
TTCTACTGTCAAAATGGAAA+AGG 0.478869 7_2:-70468635 Msa1073110:CDS
ATGTTTAAAGTAATTTGTAC+AGG 0.480336 7_2:+70467257 None:intergenic
ACAACAACGAGGAATGTTAT+GGG 0.480884 7_2:-70467782 Msa1073110:CDS
GAAGCAAATATAAGGCCATA+AGG 0.481302 7_2:+70468847 None:intergenic
TGGAAAAGGTCCATGTTACC+AGG 0.482508 7_2:-70468621 Msa1073110:CDS
TTGTTTCAATGGGATTTGAC+AGG 0.492409 7_2:-70467572 Msa1073110:CDS
ATTCAAACGGTATAAGGAAC+CGG 0.492907 7_2:+70468581 None:intergenic
CTTTGTGCAGAGAAACTATC+CGG 0.494839 7_2:-70467643 Msa1073110:intron
CATAAGGTCCAGGAGTGACT+AGG 0.495943 7_2:+70468863 None:intergenic
GAGAAGAATACCTTTCAAAA+GGG 0.496921 7_2:+70471273 None:intergenic
GTGCGTGGAGTCCCCATAGA+TGG 0.497459 7_2:+70467806 None:intergenic
ACAATCTTCTTTGGGATCCA+AGG 0.509043 7_2:-70472477 Msa1073110:CDS
TTCTTCACTGCGAAGATGAA+CGG 0.509557 7_2:-70472715 Msa1073110:exon
CAAGGTCGTTTCAACACTCT+GGG 0.509561 7_2:-70472459 Msa1073110:CDS
AGAAGTGGAAACCACAAATC+CGG 0.517755 7_2:+70468782 None:intergenic
TCAACAACCCTAGTCACTCC+TGG 0.520704 7_2:-70468871 Msa1073110:CDS
TGTGGCAACAAACATCCTAC+TGG 0.528754 7_2:-70467505 Msa1073110:CDS
GTCGTTTCTGGCCTGCACTA+GGG 0.529533 7_2:+70467533 None:intergenic
AAGAATGATGAAATGAACTC+CGG 0.532307 7_2:+70467845 None:intergenic
TGAATGACTTATCTGAGAAG+TGG 0.532500 7_2:+70468767 None:intergenic
TGTTTATGGAAGGAATTAGT+GGG 0.533877 7_2:+70467473 None:intergenic
ACTGCAGAATGCGTTGGAGC+CGG 0.536679 7_2:+70467624 None:intergenic
AGAATGATGAAATGAACTCC+GGG 0.548630 7_2:+70467846 None:intergenic
AAGTCATTCATATATCTAGC+TGG 0.554427 7_2:-70468754 Msa1073110:CDS
GCAAGGATGCCACACATCCC+TGG 0.554858 7_2:+70468603 None:intergenic
AGCAAATGCTCCTGTTACAA+GGG 0.557156 7_2:-70472526 Msa1073110:CDS
GGAGTGACTAGGGTTGTTGA+AGG 0.558621 7_2:+70468874 None:intergenic
TCTTCGCAGTGAAGAAGAAG+AGG 0.563934 7_2:+70472722 None:intergenic
TTCCTCGTTGTTGTTGTGCG+TGG 0.564527 7_2:+70467791 None:intergenic
TGTCAAATCCCATTGAAACA+AGG 0.565140 7_2:+70467574 None:intergenic
AATATAAGGCCATAAGGTCC+AGG 0.569522 7_2:+70468853 None:intergenic
TGCCAGACAAGCCCTAGTGC+AGG 0.571319 7_2:-70467544 Msa1073110:CDS
CTGACATTCCCGTTTCAACA+CGG 0.572933 7_2:-70468807 Msa1073110:CDS
ATAAGGTCCAGGAGTGACTA+GGG 0.576095 7_2:+70468864 None:intergenic
TCCATGTTACCAGGGATGTG+TGG 0.577711 7_2:-70468612 Msa1073110:CDS
GTCAAATCCCATTGAAACAA+GGG 0.578126 7_2:+70467575 None:intergenic
GGCCAGAAACGACGTGAATG+TGG 0.583853 7_2:-70467523 Msa1073110:CDS
AAATAGTAGTGAGGATAACA+TGG 0.585490 7_2:+70471312 None:intergenic
GTTGTGATTGAGTCCTCTGA+TGG 0.587631 7_2:+70467597 None:intergenic
CCTCACATCAAGACTTGTTG+AGG 0.587775 7_2:+70467410 None:intergenic
AATAGGAGTTGAAATACTCA+AGG 0.594986 7_2:+70467365 None:intergenic
CTTCTATATCCGCAAAGCAA+AGG 0.596306 7_2:-70468556 Msa1073110:intron
CAACTCGGGTGTTGATGTGA+AGG 0.600481 7_2:+70471585 None:intergenic
TGGAGTCCCCATAGATGGCA+AGG 0.600546 7_2:+70467811 None:intergenic
CCAGAGTGTTGAAACGACCT+TGG 0.608285 7_2:+70472460 None:intergenic
TACAATCCAAACATCAACTC+GGG 0.610315 7_2:+70471571 None:intergenic
ATGAACGTACTGAAACCAGA+TGG 0.615760 7_2:+70472688 None:intergenic
CATCAAGACTTGTTGAGGAG+TGG 0.616531 7_2:+70467415 None:intergenic
AAGTCTTGATGTGAGGATTG+GGG 0.637862 7_2:-70467403 Msa1073110:three_prime_UTR
AGTGGGACTGAGCCTCCAGT+AGG 0.638593 7_2:+70467490 None:intergenic
GGATATAGAAGACATTCAAA+CGG 0.639224 7_2:+70468568 None:intergenic
CCTCAACAAGTCTTGATGTG+AGG 0.639425 7_2:-70467410 Msa1073110:three_prime_UTR
TGAACGTACTGAAACCAGAT+GGG 0.647169 7_2:+70472689 None:intergenic
AATTGGTTCCAATAAACACT+CGG 0.650758 7_2:-70471515 Msa1073110:intron
ATACAATCCAAACATCAACT+CGG 0.655682 7_2:+70471570 None:intergenic
GGAAAAGGTCCATGTTACCA+GGG 0.656589 7_2:-70468620 Msa1073110:CDS
AACTACTTCAAATAGTAGTG+AGG 0.659587 7_2:+70471303 None:intergenic
TTCTGCAGTAGAACCATCAG+AGG 0.659637 7_2:-70467610 Msa1073110:CDS
GAATTTCCTTGCCATCTATG+GGG 0.660257 7_2:-70467817 Msa1073110:CDS
AACGGTATAAGGAACCGGCA+AGG 0.663752 7_2:+70468586 None:intergenic
CAACAACGAGGAATGTTATG+GGG 0.670477 7_2:-70467781 Msa1073110:CDS
GGCAACAAACATCCTACTGG+AGG 0.680331 7_2:-70467502 Msa1073110:CDS
TTCACTGCGAAGATGAACGG+AGG 0.686461 7_2:-70472712 Msa1073110:exon
CTCCACGCACAACAACAACG+AGG 0.778347 7_2:-70467793 Msa1073110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTAACTAAACAAA+GGG + chr7_2:70467793-70467812 None:intergenic 10.0%
!!! TACTTTAATTCATATTTTTA+TGG - chr7_2:70469439-70469458 Msa1073110:intron 10.0%
!! ATATCTAAAAATTAAAGTTA+AGG + chr7_2:70472720-70472739 None:intergenic 10.0%
!! AAATTGAAAACAACAAAAAA+GGG + chr7_2:70467420-70467439 None:intergenic 15.0%
!! AAAATTGAAAACAACAAAAA+AGG + chr7_2:70467421-70467440 None:intergenic 15.0%
!! AAATTATTAACTAAACAAAG+GGG + chr7_2:70467792-70467811 None:intergenic 15.0%
!! CAAAATTATTAACTAAACAA+AGG + chr7_2:70467794-70467813 None:intergenic 15.0%
!!! AAACTTGTTAGTTTATATTT+AGG - chr7_2:70468554-70468573 Msa1073110:intron 15.0%
!! ATAGCAATTAGATATATAAA+AGG + chr7_2:70468641-70468660 None:intergenic 15.0%
!! GCATTAATATTTCATTTAAA+GGG + chr7_2:70469062-70469081 None:intergenic 15.0%
!! AGCATTAATATTTCATTTAA+AGG + chr7_2:70469063-70469082 None:intergenic 15.0%
!! ATGAAAATTTAAAGAGATAT+TGG - chr7_2:70469558-70469577 Msa1073110:intron 15.0%
!! TAATACTTAAAATACTGAAT+GGG - chr7_2:70469731-70469750 Msa1073110:intron 15.0%
!! CAATCAAATATATGTAAAAT+AGG - chr7_2:70469977-70469996 Msa1073110:intron 15.0%
!! TCATATAATTTGACATTAAT+TGG + chr7_2:70471648-70471667 None:intergenic 15.0%
!! TATTTGAAAGATTTCAAATT+TGG + chr7_2:70471871-70471890 None:intergenic 15.0%
!! TACAAATTACTTTAAACATA+TGG - chr7_2:70472789-70472808 Msa1073110:five_prime_UTR 15.0%
!!! TTTTGTTACAAAGTGTTTTT+TGG - chr7_2:70467438-70467457 Msa1073110:three_prime_UTR 20.0%
!! TGAAAAAGGAAAAATCAAAT+CGG + chr7_2:70467625-70467644 None:intergenic 20.0%
!!! CAAAAGCATTAAAATGAAAA+AGG + chr7_2:70467639-70467658 None:intergenic 20.0%
!! AATTATTAACTAAACAAAGG+GGG + chr7_2:70467791-70467810 None:intergenic 20.0%
!! CGTATAACTTAGTTAAAAAT+TGG + chr7_2:70467846-70467865 None:intergenic 20.0%
!!! TAAGTTATACGATTACTTTT+AGG - chr7_2:70467855-70467874 Msa1073110:intron 20.0%
!! GAAAAAGTTAAGTAAATCAA+CGG + chr7_2:70468053-70468072 None:intergenic 20.0%
!!! ATTTACTTAACTTTTTCTCT+TGG - chr7_2:70468056-70468075 Msa1073110:intron 20.0%
!!! GTATAAATGCTATGATTTTA+TGG - chr7_2:70468127-70468146 Msa1073110:intron 20.0%
!!! CTTGTTTTTAATTTACATTC+TGG - chr7_2:70468152-70468171 Msa1073110:intron 20.0%
!!! TATTCTAATTGTACCTTTTA+TGG - chr7_2:70468658-70468677 Msa1073110:intron 20.0%
!!! ATTCTAATTGTACCTTTTAT+GGG - chr7_2:70468659-70468678 Msa1073110:intron 20.0%
!! TTAATATTTCATTTAAAGGG+AGG + chr7_2:70469059-70469078 None:intergenic 20.0%
!! ATATGTAATTGTTAAGTAGT+TGG - chr7_2:70469279-70469298 Msa1073110:intron 20.0%
!!! ATTCATATTTTTATGGAAGA+AGG - chr7_2:70469446-70469465 Msa1073110:intron 20.0%
!!! ATTAATTTGATTTTAGACCA+AGG - chr7_2:70469506-70469525 Msa1073110:intron 20.0%
!! GTAATACTTAAAATACTGAA+TGG - chr7_2:70469730-70469749 Msa1073110:intron 20.0%
!! AATACTTAAAATACTGAATG+GGG - chr7_2:70469732-70469751 Msa1073110:intron 20.0%
!! AACAGAAAAGAGAAAAAATA+AGG + chr7_2:70469850-70469869 None:intergenic 20.0%
!! ATAGGATTTCTGTTTAATAA+CGG - chr7_2:70470045-70470064 Msa1073110:intron 20.0%
!! TTGGAGATAAAATAATTTCT+AGG - chr7_2:70470379-70470398 Msa1073110:intron 20.0%
!! TTAAAAAAATCAGTATCTAC+AGG + chr7_2:70471008-70471027 None:intergenic 20.0%
!!! GTTTCATTATCTTAGTTTTT+AGG - chr7_2:70471525-70471544 Msa1073110:CDS 20.0%
!!! TTTTAGGAACTATGTTTTTA+TGG - chr7_2:70471541-70471560 Msa1073110:CDS 20.0%
!! AATTCTGACTATATCTATAT+AGG + chr7_2:70471592-70471611 None:intergenic 20.0%
!! TAGAAGTTTGATATTAATGA+TGG + chr7_2:70471709-70471728 None:intergenic 20.0%
!! TTAAATATGCATCATATAGT+TGG + chr7_2:70471829-70471848 None:intergenic 20.0%
!!! CATATTTAAACATTGTTTCT+TGG - chr7_2:70471840-70471859 Msa1073110:intron 20.0%
!!! CTATACTATAACTCTTTTTA+TGG - chr7_2:70472335-70472354 Msa1073110:intron 20.0%
!!! AACAATCCATATTTTGTTTA+TGG + chr7_2:70472586-70472605 None:intergenic 20.0%
!!! TAAACAAAATATGGATTGTT+TGG - chr7_2:70472586-70472605 Msa1073110:intron 20.0%
!! TTAATAGATCAATGAGAATT+AGG - chr7_2:70472759-70472778 Msa1073110:five_prime_UTR 20.0%
!!! ATGTTTAAAGTAATTTGTAC+AGG + chr7_2:70472788-70472807 None:intergenic 20.0%
!! CGTTTGAATGAAAATTTGTT+CGG + chr7_2:70467248-70467267 None:intergenic 25.0%
! CAAAAAAGGGAAAAATGAAA+GGG + chr7_2:70467407-70467426 None:intergenic 25.0%
! ACAAAAAAGGGAAAAATGAA+AGG + chr7_2:70467408-70467427 None:intergenic 25.0%
! TTCAATGTAATCACATATGT+CGG + chr7_2:70467940-70467959 None:intergenic 25.0%
!!! TTTAATTTACATTCTGGTTC+AGG - chr7_2:70468158-70468177 Msa1073110:intron 25.0%
!! ATATTATAACTTGTAAGCAC+TGG - chr7_2:70468294-70468313 Msa1073110:intron 25.0%
!! TTCTAATTGTACCTTTTATG+GGG - chr7_2:70468660-70468679 Msa1073110:intron 25.0%
! ATATTTCAAAACCCCATAAA+AGG + chr7_2:70468674-70468693 None:intergenic 25.0%
! CAAAAATAGTCAAGAAAACT+CGG + chr7_2:70468918-70468937 None:intergenic 25.0%
!!! TAAATGGTTATCAGTTTTAG+AGG - chr7_2:70469031-70469050 Msa1073110:intron 25.0%
! AAAGCTGTTTAATGAAATTG+AGG - chr7_2:70469378-70469397 Msa1073110:intron 25.0%
! TAACAAGTAAATTACTTCTG+TGG + chr7_2:70469539-70469558 None:intergenic 25.0%
! CTTACAAATCAATAAGAACA+GGG + chr7_2:70469618-70469637 None:intergenic 25.0%
! TCTTACAAATCAATAAGAAC+AGG + chr7_2:70469619-70469638 None:intergenic 25.0%
! AAAATAAGGAAAGAATGTGA+AGG + chr7_2:70469836-70469855 None:intergenic 25.0%
! ATAGACTCTTATTGATCAAT+GGG + chr7_2:70469891-70469910 None:intergenic 25.0%
! AAAAACAAAATCTTGACCTT+TGG + chr7_2:70470256-70470275 None:intergenic 25.0%
! TCAATTTAGAAGAGATGAAT+TGG + chr7_2:70470286-70470305 None:intergenic 25.0%
! ACTCATTTGGTATTACAATA+TGG + chr7_2:70470504-70470523 None:intergenic 25.0%
! AAGCATAAGTTTATAATGCT+TGG + chr7_2:70470782-70470801 None:intergenic 25.0%
! GTACAAATGAAGCAAATATA+AGG + chr7_2:70471206-70471225 None:intergenic 25.0%
!!! ATTAGTTTTCATGAGTTGAA+TGG + chr7_2:70471371-70471390 None:intergenic 25.0%
! ATAAAATTACCTTTGCTTTG+CGG + chr7_2:70471498-70471517 None:intergenic 25.0%
! GAAGTATATCAATGAATGAA+TGG + chr7_2:70471764-70471783 None:intergenic 25.0%
! GATTCTTCATGAACATTTAT+AGG - chr7_2:70471994-70472013 Msa1073110:intron 25.0%
!! CATTTATAGGATTTAAGACT+AGG - chr7_2:70472007-70472026 Msa1073110:intron 25.0%
! TTCCTTCCATAAACAAAATA+TGG - chr7_2:70472577-70472596 Msa1073110:intron 25.0%
!!! ATCCATATTTTGTTTATGGA+AGG + chr7_2:70472582-70472601 None:intergenic 25.0%
!!! ATTGTTTGGAATTTTGATGA+TGG - chr7_2:70472600-70472619 Msa1073110:intron 25.0%
GTGTTTATGGTTCATAAGTT+AGG - chr7_2:70468000-70468019 Msa1073110:intron 30.0%
TTATCAGTGAACAAATCTGA+TGG - chr7_2:70468099-70468118 Msa1073110:intron 30.0%
TATCAGTGAACAAATCTGAT+GGG - chr7_2:70468100-70468119 Msa1073110:intron 30.0%
ATACAATCCAAACATCAACT+CGG + chr7_2:70468475-70468494 None:intergenic 30.0%
TGTATCTGCTATATTACTTC+AGG - chr7_2:70468490-70468509 Msa1073110:intron 30.0%
GTATCTGCTATATTACTTCA+GGG - chr7_2:70468491-70468510 Msa1073110:intron 30.0%
! AATTGGTTCCAATAAACACT+CGG - chr7_2:70468527-70468546 Msa1073110:intron 30.0%
AAATAGTAGTGAGGATAACA+TGG + chr7_2:70468733-70468752 None:intergenic 30.0%
AACTACTTCAAATAGTAGTG+AGG + chr7_2:70468742-70468761 None:intergenic 30.0%
GAGAAGAATACCTTTCAAAA+GGG + chr7_2:70468772-70468791 None:intergenic 30.0%
TGAGAAGAATACCTTTCAAA+AGG + chr7_2:70468773-70468792 None:intergenic 30.0%
!! GAAAGGTATTCTTCTCAATT+TGG - chr7_2:70468776-70468795 Msa1073110:CDS 30.0%
GAGATTGATCAAAGTTTAAG+AGG + chr7_2:70468820-70468839 None:intergenic 30.0%
GACATGCACATTCAAATATA+TGG + chr7_2:70468875-70468894 None:intergenic 30.0%
CACTTAACTGACATTTGAAA+AGG + chr7_2:70468994-70469013 None:intergenic 30.0%
TTTCAAATGTCAGTTAAGTG+TGG - chr7_2:70468994-70469013 Msa1073110:intron 30.0%
TAAAGGGCAAAAAACAACTT+GGG + chr7_2:70469173-70469192 None:intergenic 30.0%
TTAAAGGGCAAAAAACAACT+TGG + chr7_2:70469174-70469193 None:intergenic 30.0%
CTAGTGAATAGGCTATTAAA+GGG + chr7_2:70469189-70469208 None:intergenic 30.0%
TCTAGTGAATAGGCTATTAA+AGG + chr7_2:70469190-70469209 None:intergenic 30.0%
TAATAGCCTATTCACTAGAA+AGG - chr7_2:70469191-70469210 Msa1073110:intron 30.0%
! AAAAGTACACCCTTTATCTT+AGG - chr7_2:70469220-70469239 Msa1073110:intron 30.0%
AATTGTTAAGTAGTTGGACT+TGG - chr7_2:70469285-70469304 Msa1073110:intron 30.0%
GACTAGGTAATATACCTATT+GGG - chr7_2:70469307-70469326 Msa1073110:intron 30.0%
TCTATATCTCAATTCCCAAT+AGG + chr7_2:70469324-70469343 None:intergenic 30.0%
TTGGGAATTGAGATATAGAT+TGG - chr7_2:70469325-70469344 Msa1073110:intron 30.0%
!! AATTTGATTTTAGACCAAGG+AGG - chr7_2:70469509-70469528 Msa1073110:intron 30.0%
! TTTGTAAGAAGCATACAGAA+AGG - chr7_2:70469630-70469649 Msa1073110:intron 30.0%
AGTATGAAGAGAAATTCCAT+TGG - chr7_2:70469799-70469818 Msa1073110:intron 30.0%
GATAGACTCTTATTGATCAA+TGG + chr7_2:70469892-70469911 None:intergenic 30.0%
TTTGCAACATTGAGCATATT+TGG + chr7_2:70470115-70470134 None:intergenic 30.0%
AAATATGCTCAATGTTGCAA+AGG - chr7_2:70470114-70470133 Msa1073110:intron 30.0%
!! ATTTTAGTAGTTCCTTGACA+TGG - chr7_2:70470213-70470232 Msa1073110:intron 30.0%
! TTTTAGTAGTTCCTTGACAT+GGG - chr7_2:70470214-70470233 Msa1073110:intron 30.0%
TATGTATTCTTTAAGCCCAA+AGG - chr7_2:70470338-70470357 Msa1073110:intron 30.0%
ATGTATTCTTTAAGCCCAAA+GGG - chr7_2:70470339-70470358 Msa1073110:intron 30.0%
GCTCTTTAATAACACTCATT+TGG + chr7_2:70470517-70470536 None:intergenic 30.0%
TCGAATAGCAGTTATTATAG+CGG - chr7_2:70470628-70470647 Msa1073110:intron 30.0%
! CTATTAACATTGATGACTAG+CGG - chr7_2:70470653-70470672 Msa1073110:intron 30.0%
CTTTCTAAATGAAGACGATT+TGG + chr7_2:70470721-70470740 None:intergenic 30.0%
TTCATTTAGAAAGTCATCCA+AGG - chr7_2:70470728-70470747 Msa1073110:intron 30.0%
CAAATCCACAAAACAATCAT+TGG - chr7_2:70470861-70470880 Msa1073110:intron 30.0%
!! CATAACCAATGATTGTTTTG+TGG + chr7_2:70470869-70470888 None:intergenic 30.0%
! CAAAACAATCATTGGTTATG+AGG - chr7_2:70470869-70470888 Msa1073110:intron 30.0%
ATCCTATCAACAAGTTTGAA+TGG - chr7_2:70470897-70470916 Msa1073110:intron 30.0%
!! TACCATTCAAACTTGTTGAT+AGG + chr7_2:70470902-70470921 None:intergenic 30.0%
AATTCTTGCGTAATATGTGT+TGG + chr7_2:70470962-70470981 None:intergenic 30.0%
CATATTACGCAAGAATTTGA+TGG - chr7_2:70470965-70470984 Msa1073110:intron 30.0%
TTTGTGCACCTTGATATTTA+AGG - chr7_2:70471083-70471102 Msa1073110:intron 30.0%
GAACAGAACCTTAAATATCA+AGG + chr7_2:70471094-70471113 None:intergenic 30.0%
AAGTCATTCATATATCTAGC+TGG - chr7_2:70471288-70471307 Msa1073110:CDS 30.0%
TTCTACTGTCAAAATGGAAA+AGG - chr7_2:70471407-70471426 Msa1073110:intron 30.0%
GGATATAGAAGACATTCAAA+CGG + chr7_2:70471477-70471496 None:intergenic 30.0%
ATGTTCATGAAGAATCATGA+TGG + chr7_2:70471990-70472009 None:intergenic 30.0%
!! CATTTAGTTTGCAGCTAAAT+GGG + chr7_2:70472042-70472061 None:intergenic 30.0%
AAGAATGATGAAATGAACTC+CGG + chr7_2:70472200-70472219 None:intergenic 30.0%
TGTTTATGGAAGGAATTAGT+GGG + chr7_2:70472572-70472591 None:intergenic 30.0%
TTGTTTATGGAAGGAATTAG+TGG + chr7_2:70472573-70472592 None:intergenic 30.0%
!!! TTTGGAATTTTGATGATGGA+AGG - chr7_2:70472604-70472623 Msa1073110:intron 30.0%
AATAGGAGTTGAAATACTCA+AGG + chr7_2:70472680-70472699 None:intergenic 30.0%
TGAGAAAAATGATCCTCAAT+AGG + chr7_2:70472697-70472716 None:intergenic 30.0%
!! AGATATATCCATTTTAGTGC+TGG - chr7_2:70472734-70472753 Msa1073110:five_prime_UTR 30.0%
TATTAACACCAGCACTAAAA+TGG + chr7_2:70472745-70472764 None:intergenic 30.0%
!! AGCTACGACTTTTTCTTCTT+CGG + chr7_2:70467298-70467317 None:intergenic 35.0%
GGTGTGTGAAAATTGAAGAA+GGG + chr7_2:70467386-70467405 None:intergenic 35.0%
! CGCTTTTCACAATCTTCTTT+GGG - chr7_2:70467557-70467576 Msa1073110:CDS 35.0%
CATAAACACAGACAAAGACA+CGG + chr7_2:70467989-70468008 None:intergenic 35.0%
TTTCTCTTGGAGTTGTAACA+AGG - chr7_2:70468069-70468088 Msa1073110:intron 35.0%
TTCTCTTGGAGTTGTAACAA+GGG - chr7_2:70468070-70468089 Msa1073110:intron 35.0%
TGTGAAAAATGTCAGAGTTC+CGG + chr7_2:70468325-70468344 None:intergenic 35.0%
TACAATCCAAACATCAACTC+GGG + chr7_2:70468474-70468493 None:intergenic 35.0%
! AGGGTATTTGAGAGACAAAT+TGG - chr7_2:70468510-70468529 Msa1073110:intron 35.0%
GTTTCTTACCGAGTGTTTAT+TGG + chr7_2:70468538-70468557 None:intergenic 35.0%
ACATTACATCAGCAAGAACT+TGG + chr7_2:70468617-70468636 None:intergenic 35.0%
CAGAACAAGATGTCAATGAA+AGG - chr7_2:70469132-70469151 Msa1073110:intron 35.0%
ACAAGATGTCAATGAAAGGT+TGG - chr7_2:70469136-70469155 Msa1073110:intron 35.0%
CTCCTGAATCCTAAGATAAA+GGG + chr7_2:70469232-70469251 None:intergenic 35.0%
GGACTAGGTAATATACCTAT+TGG - chr7_2:70469306-70469325 Msa1073110:intron 35.0%
!! TAGATTGGTCTAGAAGAGAA+TGG - chr7_2:70469340-70469359 Msa1073110:intron 35.0%
CTAGAAGAGAATGGTATAAG+AGG - chr7_2:70469349-70469368 Msa1073110:intron 35.0%
TGAAAATGACTTGACCAACA+TGG - chr7_2:70469586-70469605 Msa1073110:intron 35.0%
GAAAATGACTTGACCAACAT+GGG - chr7_2:70469587-70469606 Msa1073110:intron 35.0%
! AAGAGTGTACTACAGAAAGA+AGG - chr7_2:70469689-70469708 Msa1073110:intron 35.0%
TACTACAGAAAGAAGGTGAA+GGG - chr7_2:70469696-70469715 Msa1073110:intron 35.0%
ATGAAGAGAAATTCCATTGG+AGG - chr7_2:70469802-70469821 Msa1073110:intron 35.0%
TGAAGAGAAATTCCATTGGA+GGG - chr7_2:70469803-70469822 Msa1073110:intron 35.0%
TGGAAGGCTCAAAACAATAA+AGG - chr7_2:70469931-70469950 Msa1073110:intron 35.0%
GGAAGGCTCAAAACAATAAA+GGG - chr7_2:70469932-70469951 Msa1073110:intron 35.0%
GAAGGCTCAAAACAATAAAG+GGG - chr7_2:70469933-70469952 Msa1073110:intron 35.0%
GTAAAATAGGATCGTGACTT+AGG - chr7_2:70469990-70470009 Msa1073110:intron 35.0%
!! ACTTAGGTTGAGAATACAAG+AGG - chr7_2:70470006-70470025 Msa1073110:intron 35.0%
!! CTTAGGTTGAGAATACAAGA+GGG - chr7_2:70470007-70470026 Msa1073110:intron 35.0%
!! TTAGGTTGAGAATACAAGAG+GGG - chr7_2:70470008-70470027 Msa1073110:intron 35.0%
TAAACAGAAATCCTATACCG+AGG + chr7_2:70470041-70470060 None:intergenic 35.0%
!! TTTGGTTGTTAGCTTTGTAC+TGG + chr7_2:70470097-70470116 None:intergenic 35.0%
! CAAAGGTGCAAATGTTACAA+TGG - chr7_2:70470131-70470150 Msa1073110:intron 35.0%
!! ATCAAGTGGGAAAGTACTAA+TGG - chr7_2:70470176-70470195 Msa1073110:intron 35.0%
TTTAGTAGTTCCTTGACATG+GGG - chr7_2:70470215-70470234 Msa1073110:intron 35.0%
TTTCATGTGAAAGACCCTTT+GGG + chr7_2:70470356-70470375 None:intergenic 35.0%
ATTTCATGTGAAAGACCCTT+TGG + chr7_2:70470357-70470376 None:intergenic 35.0%
AAAGGGTCTTTCACATGAAA+TGG - chr7_2:70470356-70470375 Msa1073110:intron 35.0%
GTGGTCTAAAGATGTTAGTT+AGG + chr7_2:70470411-70470430 None:intergenic 35.0%
TGAGATAAATGGAAATGTCG+TGG + chr7_2:70470430-70470449 None:intergenic 35.0%
TTCTCAGCTCTTGAGATAAA+TGG + chr7_2:70470441-70470460 None:intergenic 35.0%
!! TGGTTTGTTCAAATTCAGCT+AGG + chr7_2:70470557-70470576 None:intergenic 35.0%
CGTATCGAATTACAGTATCA+CGG + chr7_2:70470588-70470607 None:intergenic 35.0%
TTTAGAAAGTCATCCAAGGT+TGG - chr7_2:70470732-70470751 Msa1073110:intron 35.0%
CATTTGCACTGTAAAGAAGA+AGG + chr7_2:70470938-70470957 None:intergenic 35.0%
CTTCTTCTTTACAGTGCAAA+TGG - chr7_2:70470936-70470955 Msa1073110:intron 35.0%
GAAGCAAATATAAGGCCATA+AGG + chr7_2:70471198-70471217 None:intergenic 35.0%
TGAATGACTTATCTGAGAAG+TGG + chr7_2:70471278-70471297 None:intergenic 35.0%
AGGTTAGTACAGCTTAGTTA+TGG - chr7_2:70471316-70471335 Msa1073110:CDS 35.0%
GGTTAGTACAGCTTAGTTAT+GGG - chr7_2:70471317-70471336 Msa1073110:CDS 35.0%
! TTTCATGAGTTGAATGGTTC+TGG + chr7_2:70471365-70471384 None:intergenic 35.0%
TGTAGCTTCTACTGTCAAAA+TGG - chr7_2:70471401-70471420 Msa1073110:intron 35.0%
ATTCAAACGGTATAAGGAAC+CGG + chr7_2:70471464-70471483 None:intergenic 35.0%
GAAGACATTCAAACGGTATA+AGG + chr7_2:70471470-70471489 None:intergenic 35.0%
GATTAACATCGATGTTGAGT+TGG - chr7_2:70471677-70471696 Msa1073110:intron 35.0%
TATGCATCATATAGTTGGCA+TGG + chr7_2:70471824-70471843 None:intergenic 35.0%
TTCTGAGTGCATTAGTTGAT+AGG - chr7_2:70471909-70471928 Msa1073110:intron 35.0%
!! GCATTTAGTTTGCAGCTAAA+TGG + chr7_2:70472043-70472062 None:intergenic 35.0%
AGAATGATGAAATGAACTCC+GGG + chr7_2:70472199-70472218 None:intergenic 35.0%
AACAACAACGAGGAATGTTA+TGG - chr7_2:70472259-70472278 Msa1073110:intron 35.0%
ACAACAACGAGGAATGTTAT+GGG - chr7_2:70472260-70472279 Msa1073110:intron 35.0%
AAGTAAAACTTGCCTCCATT+TGG + chr7_2:70472310-70472329 None:intergenic 35.0%
! AATCACAACCCTTGTTTCAA+TGG - chr7_2:70472459-70472478 Msa1073110:CDS 35.0%
! ATCACAACCCTTGTTTCAAT+GGG - chr7_2:70472460-70472479 Msa1073110:CDS 35.0%
GTCAAATCCCATTGAAACAA+GGG + chr7_2:70472470-70472489 None:intergenic 35.0%
TGTCAAATCCCATTGAAACA+AGG + chr7_2:70472471-70472490 None:intergenic 35.0%
TTGTTTCAATGGGATTTGAC+AGG - chr7_2:70472470-70472489 Msa1073110:CDS 35.0%
GAGTATTTCAACTCCTATTG+AGG - chr7_2:70472681-70472700 Msa1073110:intron 35.0%
TTCTTCACTGCGAAGATGAA+CGG - chr7_2:70467327-70467346 Msa1073110:three_prime_UTR 40.0%
TGAACGTACTGAAACCAGAT+GGG + chr7_2:70467356-70467375 None:intergenic 40.0%
ATGAACGTACTGAAACCAGA+TGG + chr7_2:70467357-70467376 None:intergenic 40.0%
GGGTGTGTGAAAATTGAAGA+AGG + chr7_2:70467387-70467406 None:intergenic 40.0%
AGCAAATGCTCCTGTTACAA+GGG - chr7_2:70467516-70467535 Msa1073110:CDS 40.0%
ATGATGAAAGCCCTTGTAAC+AGG + chr7_2:70467529-70467548 None:intergenic 40.0%
! GCGCTTTTCACAATCTTCTT+TGG - chr7_2:70467556-70467575 Msa1073110:CDS 40.0%
!! ACAATCTTCTTTGGGATCCA+AGG - chr7_2:70467565-70467584 Msa1073110:CDS 40.0%
TCATGTCATTGTCTCGAATC+CGG - chr7_2:70467960-70467979 Msa1073110:intron 40.0%
CGTGTCTTTGTCTGTGTTTA+TGG - chr7_2:70467987-70468006 Msa1073110:intron 40.0%
CTTATCTCACTAAGTGTGGT+TGG + chr7_2:70468217-70468236 None:intergenic 40.0%
CAACCACACTTAGTGAGATA+AGG - chr7_2:70468215-70468234 Msa1073110:intron 40.0%
! AAGCCTTATCTCACTAAGTG+TGG + chr7_2:70468221-70468240 None:intergenic 40.0%
ACACTTAGTGAGATAAGGCT+TGG - chr7_2:70468220-70468239 Msa1073110:intron 40.0%
! TCTTTGGAAAGCTTCGCATA+TGG - chr7_2:70468412-70468431 Msa1073110:intron 40.0%
TCAGTTAAGTGTGGATCACA+CGG - chr7_2:70469003-70469022 Msa1073110:intron 40.0%
AACTTCCGTGAGGATAAAGA+GGG - chr7_2:70469095-70469114 Msa1073110:intron 40.0%
CTTTACCCTCTTTATCCTCA+CGG + chr7_2:70469103-70469122 None:intergenic 40.0%
GGATAAAGAGGGTAAAGTCT+TGG - chr7_2:70469106-70469125 Msa1073110:intron 40.0%
TAGCCTATTCACTAGAAAGG+AGG - chr7_2:70469194-70469213 Msa1073110:intron 40.0%
! AGACCTCCTTTCTAGTGAAT+AGG + chr7_2:70469200-70469219 None:intergenic 40.0%
CACCCTTTATCTTAGGATTC+AGG - chr7_2:70469227-70469246 Msa1073110:intron 40.0%
CCTCCTGAATCCTAAGATAA+AGG + chr7_2:70469233-70469252 None:intergenic 40.0%
CCTTTATCTTAGGATTCAGG+AGG - chr7_2:70469230-70469249 Msa1073110:intron 40.0%
TAAGTAGTTGGACTTGGACT+AGG - chr7_2:70469291-70469310 Msa1073110:intron 40.0%
!! AGCATACAGAAAGGTGTTGT+TGG - chr7_2:70469639-70469658 Msa1073110:intron 40.0%
GTACTACAGAAAGAAGGTGA+AGG - chr7_2:70469695-70469714 Msa1073110:intron 40.0%
! TAGGTTGAGAATACAAGAGG+GGG - chr7_2:70470009-70470028 Msa1073110:intron 40.0%
ACTGCAACAATAGGATCAAG+TGG - chr7_2:70470162-70470181 Msa1073110:intron 40.0%
CTGCAACAATAGGATCAAGT+GGG - chr7_2:70470163-70470182 Msa1073110:intron 40.0%
! GCTGCAATCTGTTTTACCAA+AGG - chr7_2:70470237-70470256 Msa1073110:intron 40.0%
GGTCTTTCACATGAAATGGT+TGG - chr7_2:70470360-70470379 Msa1073110:intron 40.0%
AAGAGCTGAGAATATTCAGC+TGG - chr7_2:70470449-70470468 Msa1073110:intron 40.0%
ACAGTATCACGGAACAGTAA+TGG + chr7_2:70470577-70470596 None:intergenic 40.0%
TTGTCGATCGCAGAAAATAG+TGG + chr7_2:70470691-70470710 None:intergenic 40.0%
AAAGTCATCCAAGGTTGGAA+AGG - chr7_2:70470737-70470756 Msa1073110:intron 40.0%
AACATTGAATGCTGAGACCA+GGG + chr7_2:70470817-70470836 None:intergenic 40.0%
! TACGCAAGAATTTGATGGCA+TGG - chr7_2:70470970-70470989 Msa1073110:intron 40.0%
AATATAAGGCCATAAGGTCC+AGG + chr7_2:70471192-70471211 None:intergenic 40.0%
ACGGGAATGTCAGAGAAAAA+GGG + chr7_2:70471228-70471247 None:intergenic 40.0%
AACGGGAATGTCAGAGAAAA+AGG + chr7_2:70471229-70471248 None:intergenic 40.0%
AGAAGTGGAAACCACAAATC+CGG + chr7_2:70471263-70471282 None:intergenic 40.0%
!! CATATATCTAGCTGGTCTTC+AGG - chr7_2:70471296-70471315 Msa1073110:CDS 40.0%
CTTCTATATCCGCAAAGCAA+AGG - chr7_2:70471486-70471505 Msa1073110:intron 40.0%
CTATATAGGCGCATTCCTTT+GGG + chr7_2:70471578-70471597 None:intergenic 40.0%
TCTATATAGGCGCATTCCTT+TGG + chr7_2:70471579-70471598 None:intergenic 40.0%
! TAGTTTGCAGCTAAATGGGA+AGG + chr7_2:70472038-70472057 None:intergenic 40.0%
TGAACCTACATTACAGTTCC+CGG - chr7_2:70472178-70472197 Msa1073110:intron 40.0%
CAACAACGAGGAATGTTATG+GGG - chr7_2:70472261-70472280 Msa1073110:intron 40.0%
!!! CTTTTTTGACTCACTGAGCA+TGG - chr7_2:70472373-70472392 Msa1073110:intron 40.0%
CTTTGTGCAGAGAAACTATC+CGG - chr7_2:70472399-70472418 Msa1073110:intron 40.0%
ACAAGTCTTGATGTGAGGAT+TGG - chr7_2:70472637-70472656 Msa1073110:intron 40.0%
CAAGTCTTGATGTGAGGATT+GGG - chr7_2:70472638-70472657 Msa1073110:intron 40.0%
AAGTCTTGATGTGAGGATTG+GGG - chr7_2:70472639-70472658 Msa1073110:intron 40.0%
TCTTCGCAGTGAAGAAGAAG+AGG + chr7_2:70467323-70467342 None:intergenic 45.0%
CAGCAAATGCTCCTGTTACA+AGG - chr7_2:70467515-70467534 Msa1073110:CDS 45.0%
CAAGGTCGTTTCAACACTCT+GGG - chr7_2:70467583-70467602 Msa1073110:CDS 45.0%
TGGTTCAGGATAGAACACTG+TGG - chr7_2:70468172-70468191 Msa1073110:intron 45.0%
ACTAAGTGTGGTTGGCAACA+TGG + chr7_2:70468209-70468228 None:intergenic 45.0%
!! CTTGTAAGCACTGGAAACAC+CGG - chr7_2:70468303-70468322 Msa1073110:intron 45.0%
! GAGTTGTGTTGTTCTTGCTC+TGG - chr7_2:70468382-70468401 Msa1073110:intron 45.0%
TTGCTCTGGCAGGATATCTT+TGG - chr7_2:70468396-70468415 Msa1073110:intron 45.0%
!! TCAACACCCGAGTTGATGTT+TGG - chr7_2:70468465-70468484 Msa1073110:intron 45.0%
! GTTGCTGTAGCCCTTTTGAA+AGG - chr7_2:70468759-70468778 Msa1073110:CDS 45.0%
CAGTTAAGTGTGGATCACAC+GGG - chr7_2:70469004-70469023 Msa1073110:intron 45.0%
GGATCACACGGGATGATAAA+TGG - chr7_2:70469015-70469034 Msa1073110:intron 45.0%
CACATCTTTGAACTTCCGTG+AGG - chr7_2:70469085-70469104 Msa1073110:intron 45.0%
GAACTTCCGTGAGGATAAAG+AGG - chr7_2:70469094-70469113 Msa1073110:intron 45.0%
TATCTTAGGATTCAGGAGGC+TGG - chr7_2:70469234-70469253 Msa1073110:intron 45.0%
ATCTTAGGATTCAGGAGGCT+GGG - chr7_2:70469235-70469254 Msa1073110:intron 45.0%
ATGTATGACGAGTGAGAGTG+AGG - chr7_2:70469410-70469429 Msa1073110:intron 45.0%
TGTATGACGAGTGAGAGTGA+GGG - chr7_2:70469411-70469430 Msa1073110:intron 45.0%
!! AAGGTGTTGTTGGCGATCAA+CGG - chr7_2:70469649-70469668 Msa1073110:intron 45.0%
TGAATGGGGAGCAGAAGTTA+GGG - chr7_2:70469746-70469765 Msa1073110:intron 45.0%
GAAGGCTATTTACCCTCCAA+TGG + chr7_2:70469818-70469837 None:intergenic 45.0%
!! CAGTGCCAACAGAGGTATTA+TGG - chr7_2:70469911-70469930 Msa1073110:intron 45.0%
!! GCCAACAGAGGTATTATGGA+AGG - chr7_2:70469915-70469934 Msa1073110:intron 45.0%
GCCTTCCATAATACCTCTGT+TGG + chr7_2:70469919-70469938 None:intergenic 45.0%
GAAATCCTATACCGAGGAAG+TGG + chr7_2:70470035-70470054 None:intergenic 45.0%
GACAAGTGCACTGCAACAAT+AGG - chr7_2:70470153-70470172 Msa1073110:intron 45.0%
AATTCAGACGCATTGTGCAG+TGG - chr7_2:70470305-70470324 Msa1073110:intron 45.0%
ACACACAACCTTTCCAACCT+TGG + chr7_2:70470748-70470767 None:intergenic 45.0%
GAACATTGAATGCTGAGACC+AGG + chr7_2:70470818-70470837 None:intergenic 45.0%
TGCACTGTAAAGAAGAAGGC+AGG + chr7_2:70470934-70470953 None:intergenic 45.0%
ATAAGGTCCAGGAGTGACTA+GGG + chr7_2:70471181-70471200 None:intergenic 45.0%
CTGACATTCCCGTTTCAACA+CGG - chr7_2:70471235-70471254 Msa1073110:intron 45.0%
AATCCGGAACCGTGTTGAAA+CGG + chr7_2:70471247-70471266 None:intergenic 45.0%
!! GAGTTGAATGGTTCTGGACA+TGG + chr7_2:70471359-70471378 None:intergenic 45.0%
TGGAAAAGGTCCATGTTACC+AGG - chr7_2:70471421-70471440 Msa1073110:intron 45.0%
GGAAAAGGTCCATGTTACCA+GGG - chr7_2:70471422-70471441 Msa1073110:intron 45.0%
ATGGACACAAGCTTTCCCAA+AGG - chr7_2:70471560-70471579 Msa1073110:CDS 45.0%
GCATGAGTGAATTGTCACGT+GGG + chr7_2:70471943-70471962 None:intergenic 45.0%
TGCATGAGTGAATTGTCACG+TGG + chr7_2:70471944-70471963 None:intergenic 45.0%
AACTCCGGGAACTGTAATGT+AGG + chr7_2:70472185-70472204 None:intergenic 45.0%
TTCTGCAGTAGAACCATCAG+AGG - chr7_2:70472432-70472451 Msa1073110:intron 45.0%
GTTGTGATTGAGTCCTCTGA+TGG + chr7_2:70472448-70472467 None:intergenic 45.0%
TGTGGCAACAAACATCCTAC+TGG - chr7_2:70472537-70472556 Msa1073110:intron 45.0%
!! CATCAAGACTTGTTGAGGAG+TGG + chr7_2:70472630-70472649 None:intergenic 45.0%
!! CCTCACATCAAGACTTGTTG+AGG + chr7_2:70472635-70472654 None:intergenic 45.0%
CCTCAACAAGTCTTGATGTG+AGG - chr7_2:70472632-70472651 Msa1073110:intron 45.0%
TTCACTGCGAAGATGAACGG+AGG - chr7_2:70467330-70467349 Msa1073110:three_prime_UTR 50.0%
!! CCAGAGTGTTGAAACGACCT+TGG + chr7_2:70467585-70467604 None:intergenic 50.0%
CCAAGGTCGTTTCAACACTC+TGG - chr7_2:70467582-70467601 Msa1073110:CDS 50.0%
CACTCTGGGCTTGTCTTATC+AGG - chr7_2:70467597-70467616 Msa1073110:CDS 50.0%
GCTTCGACACCTCTAATCGT+AGG - chr7_2:70467884-70467903 Msa1073110:intron 50.0%
ACAGACAAAGACACGGACAC+CGG + chr7_2:70467982-70468001 None:intergenic 50.0%
! TGTGTTGTTCTTGCTCTGGC+AGG - chr7_2:70468386-70468405 Msa1073110:intron 50.0%
!! CAACTCGGGTGTTGATGTGA+AGG + chr7_2:70468460-70468479 None:intergenic 50.0%
! ATGTGACGCACTCTTTTCGC+AGG - chr7_2:70468692-70468711 Msa1073110:intron 50.0%
TCTTAGGATTCAGGAGGCTG+GGG - chr7_2:70469236-70469255 Msa1073110:intron 50.0%
ACTTCTGTGGTCAACCTCCT+TGG + chr7_2:70469526-70469545 None:intergenic 50.0%
GAACAGGGTTTGACCCATGT+TGG + chr7_2:70469603-70469622 None:intergenic 50.0%
!! AGGTGTTGTTGGCGATCAAC+GGG - chr7_2:70469650-70469669 Msa1073110:intron 50.0%
CACTCTTAACAACAGCCCCT+GGG + chr7_2:70469676-70469695 None:intergenic 50.0%
ACACTCTTAACAACAGCCCC+TGG + chr7_2:70469677-70469696 None:intergenic 50.0%
CTGAATGGGGAGCAGAAGTT+AGG - chr7_2:70469745-70469764 Msa1073110:intron 50.0%
GAGTCTATCAGTGCCAACAG+AGG - chr7_2:70469903-70469922 Msa1073110:intron 50.0%
TGCTTCAAATCCAGACACCC+TGG - chr7_2:70470797-70470816 Msa1073110:intron 50.0%
GGAGTGACTAGGGTTGTTGA+AGG + chr7_2:70471171-70471190 None:intergenic 50.0%
TCAACAACCCTAGTCACTCC+TGG - chr7_2:70471171-70471190 Msa1073110:intron 50.0%
CATAAGGTCCAGGAGTGACT+AGG + chr7_2:70471182-70471201 None:intergenic 50.0%
CTAGTCACTCCTGGACCTTA+TGG - chr7_2:70471180-70471199 Msa1073110:intron 50.0%
TTCCCGTTTCAACACGGTTC+CGG - chr7_2:70471241-70471260 Msa1073110:intron 50.0%
ATCCGGAACCGTGTTGAAAC+GGG + chr7_2:70471246-70471265 None:intergenic 50.0%
TCAACACGGTTCCGGATTTG+TGG - chr7_2:70471249-70471268 Msa1073110:intron 50.0%
TCCATGTTACCAGGGATGTG+TGG - chr7_2:70471430-70471449 Msa1073110:intron 50.0%
AACGGTATAAGGAACCGGCA+AGG + chr7_2:70471459-70471478 None:intergenic 50.0%
! TTCCTCGTTGTTGTTGTGCG+TGG + chr7_2:70472254-70472273 None:intergenic 50.0%
GGTTCTACTGCAGAATGCGT+TGG + chr7_2:70472427-70472446 None:intergenic 50.0%
TGCCACATTCACGTCGTTTC+TGG + chr7_2:70472524-70472543 None:intergenic 50.0%
GGCAACAAACATCCTACTGG+AGG - chr7_2:70472540-70472559 Msa1073110:intron 50.0%
AAGATGAACGGAGGCCCATC+TGG - chr7_2:70467339-70467358 Msa1073110:three_prime_UTR 55.0%
CGTGACACGCCTACGATTAG+AGG + chr7_2:70467896-70467915 None:intergenic 55.0%
TGGGGAGCAGAAGTTAGGGT+AGG - chr7_2:70469750-70469769 Msa1073110:intron 55.0%
CAGATTGCAGCCCCATGTCA+AGG + chr7_2:70470228-70470247 None:intergenic 55.0%
! AATGCTGAGACCAGGGTGTC+TGG + chr7_2:70470810-70470829 None:intergenic 55.0%
GCCACACATCCCTGGTAACA+TGG + chr7_2:70471434-70471453 None:intergenic 55.0%
CTCCACGCACAACAACAACG+AGG - chr7_2:70472249-70472268 Msa1073110:intron 55.0%
ATTTGGCGAGCTGGGTAGGA+TGG + chr7_2:70472293-70472312 None:intergenic 55.0%
ATCCTACCCAGCTCGCCAAA+TGG - chr7_2:70472292-70472311 Msa1073110:intron 55.0%
TTGCCTCCATTTGGCGAGCT+GGG + chr7_2:70472301-70472320 None:intergenic 55.0%
ACTGCAGAATGCGTTGGAGC+CGG + chr7_2:70472421-70472440 None:intergenic 55.0%
!! GTCGTTTCTGGCCTGCACTA+GGG + chr7_2:70472512-70472531 None:intergenic 55.0%
GGCCAGAAACGACGTGAATG+TGG - chr7_2:70472519-70472538 Msa1073110:CDS 55.0%
ACAAGAGGGGGCCACTTCCT+CGG - chr7_2:70470021-70470040 Msa1073110:intron 60.0%
GCAAGGATGCCACACATCCC+TGG + chr7_2:70471442-70471461 None:intergenic 60.0%
GGGATGTGTGGCATCCTTGC+CGG - chr7_2:70471442-70471461 Msa1073110:intron 60.0%
CTCCATTTGGCGAGCTGGGT+AGG + chr7_2:70472297-70472316 None:intergenic 60.0%
CTACCCAGCTCGCCAAATGG+AGG - chr7_2:70472295-70472314 Msa1073110:intron 60.0%
CTTGCCTCCATTTGGCGAGC+TGG + chr7_2:70472302-70472321 None:intergenic 60.0%
TGCCAGACAAGCCCTAGTGC+AGG - chr7_2:70472498-70472517 Msa1073110:CDS 60.0%
!! CGTCGTTTCTGGCCTGCACT+AGG + chr7_2:70472513-70472532 None:intergenic 60.0%
AGTGGGACTGAGCCTCCAGT+AGG + chr7_2:70472555-70472574 None:intergenic 60.0%
TGTTGGCGATCAACGGGCCC+AGG - chr7_2:70469656-70469675 Msa1073110:intron 65.0%
GTTGGCGATCAACGGGCCCA+GGG - chr7_2:70469657-70469676 Msa1073110:intron 65.0%
TTGGCGATCAACGGGCCCAG+GGG - chr7_2:70469658-70469677 Msa1073110:intron 65.0%
GGGGGCCACTTCCTCGGTAT+AGG - chr7_2:70470027-70470046 Msa1073110:intron 65.0%
GGCCTGCACTAGGGCTTGTC+TGG + chr7_2:70472503-70472522 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 70467239 70472825 70467239 ID=Msa1073110;Name=Msa1073110
chr7_2 mRNA 70467239 70472825 70467239 ID=Msa1073110-mRNA-1;Parent=Msa1073110;Name=Msa1073110-mRNA-1;_AED=0.11;_eAED=0.11;_QI=103|0.85|0.87|1|0.85|0.87|8|249|282
chr7_2 exon 70467239 70467655 70467239 ID=Msa1073110-mRNA-1:exon:15887;Parent=Msa1073110-mRNA-1
chr7_2 exon 70467778 70467870 70467778 ID=Msa1073110-mRNA-1:exon:15886;Parent=Msa1073110-mRNA-1
chr7_2 exon 70468557 70468658 70468557 ID=Msa1073110-mRNA-1:exon:15885;Parent=Msa1073110-mRNA-1
chr7_2 exon 70468747 70468898 70468747 ID=Msa1073110-mRNA-1:exon:15884;Parent=Msa1073110-mRNA-1
chr7_2 exon 70471284 70471350 70471284 ID=Msa1073110-mRNA-1:exon:15883;Parent=Msa1073110-mRNA-1
chr7_2 exon 70471516 70471656 70471516 ID=Msa1073110-mRNA-1:exon:15882;Parent=Msa1073110-mRNA-1
chr7_2 exon 70472446 70472546 70472446 ID=Msa1073110-mRNA-1:exon:15881;Parent=Msa1073110-mRNA-1
chr7_2 exon 70472698 70472825 70472698 ID=Msa1073110-mRNA-1:exon:15880;Parent=Msa1073110-mRNA-1
chr7_2 five_prime_UTR 70472723 70472825 70472723 ID=Msa1073110-mRNA-1:five_prime_utr;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70472698 70472722 70472698 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70472446 70472546 70472446 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70471516 70471656 70471516 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70471284 70471350 70471284 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70468747 70468898 70468747 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70468557 70468658 70468557 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70467778 70467870 70467778 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 CDS 70467488 70467655 70467488 ID=Msa1073110-mRNA-1:cds;Parent=Msa1073110-mRNA-1
chr7_2 three_prime_UTR 70467239 70467487 70467239 ID=Msa1073110-mRNA-1:three_prime_utr;Parent=Msa1073110-mRNA-1
Gene Sequence

>Msa1073110

ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTTACAAGGGCTTTCATCATCGCTTCAGCGCTTTTCACAATCTTCTTTGGGATCCAAGGTCGTTTCAACACTCTGGGCTTGTCTTATCAGGATATCTTTGGAAAGCTTCGCATATGGAAGTTGATCATGTCTGTATTTTCCTTCACATCAACACCCGAGTTGATGTTTGGATTGTATCTGCTATATTACTTCAGGGTATTTGAGAGACAAATTGGTTCCAATAAACACTCGGTGTTTATTGTGTTCTCCATGTTATCCTCACTACTATTTGAAGTAGTTGCTGTAGCCCTTTTGAAAGATCCTTCAACAACCCTAGTCACTCCTGGACCTTATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTCTGACATTCCCGTTTCAACACGGTTCCGGATTTGTGGTTTCCACTTCTCAGATAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTACTGTCAAAATGGAAAAGGTCCATGTTACCAGGGATGTGTGGCATCCTTGCCGGTTCCTTATACCGTTTGAATGTCTTCTATATCCGCAAAGCAAAGTTCCCGGAGTTCATTTCATCATTCTTTTCACGAATTTCCTTGCCATCTATGGGGACTCCACGCACAACAACAACGAGGAATGTTATGGGGAATAGAAACTATCCGGCTCCAACGCATTCTGCAGTAGAACCATCAGAGGACTCAATCACAACCCTTGTTTCAATGGGATTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAACGACGTGAATGTGGCAACAAACATCCTACTGGAGGCTCAGTCCCACTAA

Protein sequence

>Msa1073110

MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFTSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLSSLLFEVVAVALLKDPSTTLVTPGPYGLIFASFVPFFSDIPVSTRFRICGFHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGTPRTTTTRNVMGNRNYPAPTHSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH*