AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0069080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069080 MtrunA17_Chr1g0173201 100.000 71 0 0 21 91 1 71 3.22e-42 142
Msa0069080 MtrunA17_Chr1g0146461 51.765 85 30 3 12 91 361 439 2.54e-17 75.9
Msa0069080 MtrunA17_Chr1g0146461 68.000 50 16 0 42 91 10 59 5.37e-15 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069080 AT1G28350.3 53.030 66 29 1 26 91 309 372 1.15e-14 68.9
Msa0069080 AT1G28350.1 53.030 66 29 1 26 91 375 438 1.44e-14 68.6
Msa0069080 AT1G28350.1 45.000 60 33 0 32 91 1 60 9.18e-12 60.8
Msa0069080 AT1G28350.2 53.030 66 29 1 26 91 375 438 1.44e-14 68.6
Msa0069080 AT1G28350.2 45.000 60 33 0 32 91 1 60 9.18e-12 60.8
Msa0069080 AT2G33840.1 77.143 35 8 0 57 91 40 74 1.81e-12 62.4

Find 93 sgRNAs with CRISPR-Local

Find 601 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAAGCTTAATAACAAAA+TGG 0.199810 1_2:+36697435 Msa0069080:three_prime_UTR
TTATAGGTGTAGCCAAATTA+TGG 0.235240 1_2:+36697735 Msa0069080:intron
CTCTTCATCCTCCATGTAAA+TGG 0.251052 1_2:-36698740 None:intergenic
GCCGCTACTTGATCGAAATT+TGG 0.252289 1_2:+36697488 Msa0069080:three_prime_UTR
GTTCACTCCGTCCCATAATT+TGG 0.255447 1_2:-36697747 None:intergenic
AATTACTGCGGTGTTGGATT+TGG 0.284569 1_2:-36691987 None:intergenic
ACTTCGACAAAGCCGGTTTA+AGG 0.288565 1_2:-36699457 None:intergenic
GGGTTTCCTTCCACAATCTT+TGG 0.305525 1_2:-36699131 None:intergenic
ACAACCTTAAAAGAATTATC+AGG 0.345241 1_2:+36697626 Msa0069080:three_prime_UTR
TTGGGGTTTGTTGAACCCTT+TGG 0.351067 1_2:+36700805 Msa0069080:three_prime_UTR
TCCATGTAAATGGATGATAA+AGG 0.366918 1_2:-36698730 None:intergenic
CCCTTTATCATCCATTTACA+TGG 0.371480 1_2:+36698729 Msa0069080:three_prime_UTR
CTGGTTGCCTAGTCAAAATA+TGG 0.374269 1_2:+36697398 Msa0069080:CDS
AGTATTGTGATGTTATTAAG+AGG 0.375155 1_2:+36698549 Msa0069080:three_prime_UTR
TCAAAATATGGATTGCTGAT+TGG 0.384798 1_2:+36697410 Msa0069080:exon
TTGAAGAAAATTGAGATTGT+TGG 0.389262 1_2:+36697466 Msa0069080:three_prime_UTR
TTTGTTTCATTTGTGAAATA+CGG 0.389679 1_2:+36700724 Msa0069080:three_prime_UTR
TATAGGTGTAGCCAAATTAT+GGG 0.399258 1_2:+36697736 Msa0069080:intron
TAATAAAGTACGGAAACTTA+AGG 0.421505 1_2:+36700900 Msa0069080:three_prime_UTR
TGTTGGATTTGGATTTGAAT+TGG 0.423748 1_2:-36691976 None:intergenic
GCTAAGCTTAATAACAAAAT+GGG 0.426202 1_2:+36697436 Msa0069080:three_prime_UTR
CGGAAACTTAAGGGTATGTT+CGG 0.430147 1_2:+36700910 Msa0069080:three_prime_UTR
TTCTCTGATCCATTCCCAAT+TGG 0.433325 1_2:-36698505 None:intergenic
ATAGGCCGACATCTGCCAAT+TGG 0.434224 1_2:+36698490 Msa0069080:intron
CCATGTAAATGGATGATAAA+GGG 0.439796 1_2:-36698729 None:intergenic
AATAAAGTACGGAAACTTAA+GGG 0.440315 1_2:+36700901 Msa0069080:three_prime_UTR
TCGAAATTTGGAAAGCCGTT+GGG 0.440768 1_2:+36697500 Msa0069080:three_prime_UTR
TTGGAAATATGCAGCCTGTA+AGG 0.446216 1_2:+36700447 Msa0069080:intron
TAAGGGTATGTTCGGATTGG+TGG 0.448655 1_2:+36700918 Msa0069080:three_prime_UTR
GAAAGCCGTTGGGATGGATC+TGG 0.454876 1_2:+36697510 Msa0069080:three_prime_UTR
TTAAATATCTTATCTTACCT+TGG 0.454939 1_2:+36699168 Msa0069080:three_prime_UTR
TAGGCCGACATCTGCCAATT+GGG 0.459139 1_2:+36698491 Msa0069080:intron
ATCGAAATTTGGAAAGCCGT+TGG 0.468318 1_2:+36697499 Msa0069080:three_prime_UTR
ACATCCAGCTGACCTTAAAC+CGG 0.474408 1_2:+36699445 Msa0069080:three_prime_UTR
AGAGAAAATTACTGCGGTGT+TGG 0.474845 1_2:-36691993 None:intergenic
ATGTCAGCACACTGCATACA+TGG 0.480237 1_2:-36697802 None:intergenic
TCTTGCCCTTGTTGTAGACC+AGG 0.488474 1_2:-36698688 None:intergenic
TTTCCTTCCACAATCTTTGG+CGG 0.490487 1_2:-36699128 None:intergenic
TCAAAACCATCGTAACAAAC+AGG 0.493209 1_2:-36692185 None:intergenic
TTCAATGACTTCGACAAAGC+CGG 0.497005 1_2:-36699464 None:intergenic
TGAGTATTGGCCTCTTGTGT+TGG 0.497158 1_2:+36697588 Msa0069080:three_prime_UTR
GTGGAGCGTAATGCAGATAA+TGG 0.504803 1_2:+36699206 Msa0069080:three_prime_UTR
TATATAATCAACATATTACT+TGG 0.510815 1_2:-36700640 None:intergenic
TTCCTTCCACAATCTTTGGC+GGG 0.512138 1_2:-36699127 None:intergenic
ATTGAAATTCCGACCGACGC+TGG 0.513517 1_2:+36691852 Msa0069080:CDS
AGTAGCCGCCGCAGTAGCAC+TGG 0.513764 1_2:+36691923 Msa0069080:CDS
TGTGGAAGGAAACCCATGCT+TGG 0.518682 1_2:+36699139 Msa0069080:three_prime_UTR
ATGCCAGAGCTGATGAGTAT+TGG 0.524296 1_2:+36697575 Msa0069080:three_prime_UTR
TATTTAATGTACTCCAAGCA+TGG 0.526777 1_2:-36699152 None:intergenic
ATCAAAGCAATAATAAAGTA+CGG 0.527801 1_2:+36700890 Msa0069080:three_prime_UTR
AATAACATCACAATACTCTC+TGG 0.528355 1_2:-36698543 None:intergenic
ATTTAATGTACTCCAAGCAT+GGG 0.531281 1_2:-36699151 None:intergenic
CCTCAGCCTGTTTGTTACGA+TGG 0.535553 1_2:+36692179 Msa0069080:CDS
CGACATCTGCCAATTGGGAA+TGG 0.537270 1_2:+36698496 Msa0069080:three_prime_UTR
TTTGAGATCGTGAGAAGCAT+CGG 0.543232 1_2:+36692107 Msa0069080:CDS
AAAGCCGGTTTAAGGTCAGC+TGG 0.544325 1_2:-36699449 None:intergenic
ACTTAAGGGTATGTTCGGAT+TGG 0.544423 1_2:+36700915 Msa0069080:three_prime_UTR
AGGCCAATACTCATCAGCTC+TGG 0.554004 1_2:-36697578 None:intergenic
CATTTACATGGAGGATGAAG+AGG 0.563565 1_2:+36698741 Msa0069080:three_prime_UTR
TAACTCTCCGCTTTCATAGT+CGG 0.564786 1_2:-36699423 None:intergenic
AATTTGGAAAGCCGTTGGGA+TGG 0.569257 1_2:+36697504 Msa0069080:three_prime_UTR
TCCAAATTTCGATCAAGTAG+CGG 0.571639 1_2:-36697489 None:intergenic
TTACGGTGTGATAAGATGAC+GGG 0.572281 1_2:-36698581 None:intergenic
CGTGCATAGGTTGTTGAGTG+CGG 0.576234 1_2:+36692076 Msa0069080:intron
ATATTCTTACAGATGCCAAA+GGG 0.585169 1_2:-36700820 None:intergenic
CATTCCCAATTGGCAGATGT+CGG 0.585557 1_2:-36698495 None:intergenic
AATATTCTTACAGATGCCAA+AGG 0.587754 1_2:-36700821 None:intergenic
ATCGCAATGCCAGCGTCGGT+CGG 0.590400 1_2:-36691861 None:intergenic
ATGTTACCTGGTCTACAACA+AGG 0.591222 1_2:+36698682 Msa0069080:three_prime_UTR
GTTTCATTTGTGAAATACGG+TGG 0.593188 1_2:+36700727 Msa0069080:three_prime_UTR
AAGCTTAATAACAAAATGGG+TGG 0.593404 1_2:+36697439 Msa0069080:three_prime_UTR
TGCCCGCCAAAGATTGTGGA+AGG 0.597557 1_2:+36699125 Msa0069080:three_prime_UTR
CCATCGTAACAAACAGGCTG+AGG 0.597768 1_2:-36692179 None:intergenic
ATATTGCCCGCCAAAGATTG+TGG 0.598009 1_2:+36699121 Msa0069080:three_prime_UTR
GTGAACAAGCTAACATCCGC+TGG 0.599305 1_2:+36697379 Msa0069080:CDS
GTCATTGAATAAAATTCTAG+AGG 0.600216 1_2:+36699478 Msa0069080:three_prime_UTR
CACTATCGCAATGCCAGCGT+CGG 0.603210 1_2:-36691865 None:intergenic
TCCTTCCAGATCCATCCCAA+CGG 0.609022 1_2:-36697515 None:intergenic
TGGATAGAATATTTGAGCAG+CGG 0.618545 1_2:-36697782 None:intergenic
TTGGTTTAACGAATTTACTG+TGG 0.618688 1_2:+36699187 Msa0069080:three_prime_UTR
CAATGATTCCAGTGCTACTG+CGG 0.621909 1_2:-36691931 None:intergenic
ATTACGGTGTGATAAGATGA+CGG 0.622032 1_2:-36698582 None:intergenic
GTTGGGATGGATCTGGAAGG+AGG 0.625900 1_2:+36697517 Msa0069080:three_prime_UTR
TTGATTGCCGACTATGAAAG+CGG 0.628637 1_2:+36699416 Msa0069080:three_prime_UTR
GGTTGATGATGATTCAGCGA+CGG 0.630848 1_2:-36691955 None:intergenic
TGTTACCTGGTCTACAACAA+GGG 0.634319 1_2:+36698683 Msa0069080:three_prime_UTR
TGAGCTATATCCAACACAAG+AGG 0.641928 1_2:-36697598 None:intergenic
TTTATCATCCATTTACATGG+AGG 0.642941 1_2:+36698732 Msa0069080:three_prime_UTR
ACAGTAAATTCGTTAAACCA+AGG 0.654744 1_2:-36699185 None:intergenic
GGTGTAGCCAAATTATGGGA+CGG 0.659015 1_2:+36697740 Msa0069080:intron
GCCGTTGGGATGGATCTGGA+AGG 0.662319 1_2:+36697514 Msa0069080:three_prime_UTR
TGATTCCAGTGCTACTGCGG+CGG 0.684105 1_2:-36691928 None:intergenic
GAGCGTAATGCAGATAATGG+TGG 0.730139 1_2:+36699209 Msa0069080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTGTTCATATTTTAAT+TGG + chr1_2:36692722-36692741 Msa0069080:intron 10.0%
!! TAAAATAAAATATTCTACAT+TGG + chr1_2:36692762-36692781 Msa0069080:intron 10.0%
!! AACTTATAAAAAATTAAAAC+TGG + chr1_2:36694860-36694879 Msa0069080:intron 10.0%
!! ACTTATAAAAAATTAAAACT+GGG + chr1_2:36694861-36694880 Msa0069080:intron 10.0%
!!! TATTATTTTGTTTTATAGTA+GGG - chr1_2:36696033-36696052 None:intergenic 10.0%
!!! TTATTATTTTGTTTTATAGT+AGG - chr1_2:36696034-36696053 None:intergenic 10.0%
!!! TTTTTTTTTTATGTATATCT+AGG + chr1_2:36697336-36697355 Msa0069080:intron 10.0%
!!! TTTTTTTTTATGTATATCTA+GGG + chr1_2:36697337-36697356 Msa0069080:intron 10.0%
!! AAATAAAAATTAATATCATC+TGG - chr1_2:36698361-36698380 None:intergenic 10.0%
!!! GAATATTTTTATCTTAAAAT+AGG + chr1_2:36698472-36698491 Msa0069080:intron 10.0%
!! AATTTAAAAATTTAATGTGA+TGG + chr1_2:36699644-36699663 Msa0069080:intron 10.0%
!!! TTAGAAATTTTATTATAACA+AGG - chr1_2:36699864-36699883 None:intergenic 10.0%
!! AAATAATGAAAATTGAAAAC+AGG - chr1_2:36692046-36692065 None:intergenic 15.0%
!! ACTAAAAACAAAAAAATACA+AGG - chr1_2:36692644-36692663 None:intergenic 15.0%
!!! TACATTTTCAAAAGAATAAA+AGG - chr1_2:36692955-36692974 None:intergenic 15.0%
!!! AAATGTTGGTTTTTAAAATA+GGG - chr1_2:36694889-36694908 None:intergenic 15.0%
!!! AAAATGTTGGTTTTTAAAAT+AGG - chr1_2:36694888-36694907 None:intergenic 15.0%
!!! TATTTTAAAAACCAACATTT+TGG + chr1_2:36694404-36694423 Msa0069080:intron 15.0%
!!! TTTGAGTTTATTGATTTTAA+TGG + chr1_2:36694574-36694593 Msa0069080:intron 15.0%
!!! ATTTTCCGAATTTAAATTTA+TGG + chr1_2:36694626-36694645 Msa0069080:intron 15.0%
!! TTCATCCATAAATTTAAATT+CGG - chr1_2:36694634-36694653 None:intergenic 15.0%
!! CTTATAAAAAATTAAAACTG+GGG + chr1_2:36694862-36694881 Msa0069080:intron 15.0%
!!! AAAATGTTGGTTTTTAAAAT+AGG + chr1_2:36694888-36694907 Msa0069080:intron 15.0%
!!! AAATGTTGGTTTTTAAAATA+GGG + chr1_2:36694889-36694908 Msa0069080:intron 15.0%
!!! TCTTATTCAATTTACTTTTT+AGG + chr1_2:36696633-36696652 Msa0069080:intron 15.0%
!!! ATTTTTAATTTAGTTGTTGA+AGG + chr1_2:36697262-36697281 Msa0069080:intron 15.0%
!!! CATTTTCATATCATAATAAA+AGG - chr1_2:36697654-36697673 None:intergenic 15.0%
!! TAAATTTGTCATTACTAAAA+AGG + chr1_2:36698784-36698803 Msa0069080:intron 15.0%
!! AAAAAAATGAAAATCTTTAC+CGG - chr1_2:36698990-36699009 None:intergenic 15.0%
!!! GATTTCTTTTAAAAATTAAG+AGG - chr1_2:36699543-36699562 None:intergenic 15.0%
!!! TTTACACTTAATCTTTTTTT+GGG + chr1_2:36700178-36700197 Msa0069080:intron 15.0%
!! TATATAATCAACATATTACT+TGG - chr1_2:36700643-36700662 None:intergenic 15.0%
!!! AATAAGTTGATTATCCAATT+AGG + chr1_2:36692297-36692316 Msa0069080:intron 20.0%
!!! AAAGAAATTTGATAGCAAAT+GGG - chr1_2:36692569-36692588 None:intergenic 20.0%
!! ACAAAAAGCAAAATATTACA+AGG + chr1_2:36692874-36692893 Msa0069080:intron 20.0%
!!! TTATTCTTTTGAAAATGTAG+AGG + chr1_2:36692956-36692975 Msa0069080:intron 20.0%
!!! TCTTATCATACAATTAGTTT+AGG - chr1_2:36693435-36693454 None:intergenic 20.0%
!!! AATGTTGGTTTTTAAAATAG+GGG - chr1_2:36694890-36694909 None:intergenic 20.0%
!!! TTGATTTTTGAAGATGTTTT+AGG + chr1_2:36694527-36694546 Msa0069080:intron 20.0%
!!! GATTAATGGAATACTTTTTT+TGG + chr1_2:36694684-36694703 Msa0069080:intron 20.0%
!!! AATGTTGGTTTTTAAAATAG+GGG + chr1_2:36694890-36694909 Msa0069080:intron 20.0%
!!! GAGAAACATAACTAATTTTT+TGG + chr1_2:36695280-36695299 Msa0069080:intron 20.0%
!! TAGCAAAAAGAAAGAAAAAA+GGG + chr1_2:36695305-36695324 Msa0069080:intron 20.0%
!! AATAATAGTTTAATGTATCC+AGG - chr1_2:36695524-36695543 None:intergenic 20.0%
!! CTTTATCTTATAATTGAAAC+CGG + chr1_2:36696731-36696750 Msa0069080:intron 20.0%
!! ATTTAAATAGATACTGAAGA+AGG - chr1_2:36696796-36696815 None:intergenic 20.0%
!! TTTGATTGTGTAAAAACATA+CGG - chr1_2:36696877-36696896 None:intergenic 20.0%
!! AAAGAATCAAAATTAGATGT+AGG + chr1_2:36697096-36697115 Msa0069080:intron 20.0%
!!! TGGATAATTTTTTCAATCTA+CGG + chr1_2:36697144-36697163 Msa0069080:intron 20.0%
!! ACTATCAAAGAAATAAATGA+AGG + chr1_2:36697981-36698000 Msa0069080:intron 20.0%
!! CTATCAAAGAAATAAATGAA+GGG + chr1_2:36697982-36698001 Msa0069080:intron 20.0%
!!! AACAAACTTTGAGAAAATTA+TGG + chr1_2:36698076-36698095 Msa0069080:intron 20.0%
!! TTCATTTATGGAAAAAACTT+AGG - chr1_2:36698163-36698182 None:intergenic 20.0%
!!! TTTTTCCATAAATGAATACA+TGG + chr1_2:36698167-36698186 Msa0069080:intron 20.0%
!! AAAAACCATGTATTCATTTA+TGG - chr1_2:36698175-36698194 None:intergenic 20.0%
!! AAAACAAAACATAACTAGAT+AGG - chr1_2:36698824-36698843 None:intergenic 20.0%
!!! CAGAAAAATATTTTGAATGA+AGG + chr1_2:36698911-36698930 Msa0069080:intron 20.0%
!!! ATTTTGAATGAAGGATTAAA+AGG + chr1_2:36698920-36698939 Msa0069080:intron 20.0%
!!! TGTGATTTTATATAAGATTG+TGG + chr1_2:36698944-36698963 Msa0069080:intron 20.0%
!!! TTTTATTTTCACATTCACTT+CGG - chr1_2:36699096-36699115 None:intergenic 20.0%
!! AGTGAATGTGAAAATAAAAA+AGG + chr1_2:36699097-36699116 Msa0069080:three_prime_UTR 20.0%
!! TTAAATATCTTATCTTACCT+TGG + chr1_2:36699168-36699187 Msa0069080:three_prime_UTR 20.0%
!! GAAACTACTACTATTATAAA+TGG - chr1_2:36699278-36699297 None:intergenic 20.0%
!!! TTCTTTTAAAAATTAAGAGG+AGG - chr1_2:36699540-36699559 None:intergenic 20.0%
!!! TGTGACATTTTCTTATAAAT+AGG - chr1_2:36699900-36699919 None:intergenic 20.0%
!! TAGTAATATCAGAAAAATAG+TGG + chr1_2:36699932-36699951 Msa0069080:intron 20.0%
!! AGTAATATCAGAAAAATAGT+GGG + chr1_2:36699933-36699952 Msa0069080:intron 20.0%
!!! GTAAGAATGATTTTTTATTG+AGG - chr1_2:36700074-36700093 None:intergenic 20.0%
!!! GTTTACACTTAATCTTTTTT+TGG + chr1_2:36700177-36700196 Msa0069080:intron 20.0%
!!! TTACACTTAATCTTTTTTTG+GGG + chr1_2:36700179-36700198 Msa0069080:intron 20.0%
!! TTTGTTTCATTTGTGAAATA+CGG + chr1_2:36700724-36700743 Msa0069080:three_prime_UTR 20.0%
!! ATCAAAGCAATAATAAAGTA+CGG + chr1_2:36700890-36700909 Msa0069080:three_prime_UTR 20.0%
!!! ATACATTTGTTTTCCACTAT+GGG - chr1_2:36692323-36692342 None:intergenic 25.0%
!!! TATACATTTGTTTTCCACTA+TGG - chr1_2:36692324-36692343 None:intergenic 25.0%
! TGAACAATTGAAAAAACCTT+GGG - chr1_2:36692433-36692452 None:intergenic 25.0%
! ATGAACAATTGAAAAAACCT+TGG - chr1_2:36692434-36692453 None:intergenic 25.0%
!! CAAAGAAATTTGATAGCAAA+TGG - chr1_2:36692570-36692589 None:intergenic 25.0%
!!! CATTTGCTATCAAATTTCTT+TGG + chr1_2:36692568-36692587 Msa0069080:intron 25.0%
! AAAAAAATGGTAAACTTGCA+GGG - chr1_2:36692612-36692631 None:intergenic 25.0%
! AAGGACTTAAACCAAAAAAA+TGG - chr1_2:36692625-36692644 None:intergenic 25.0%
! TCAAAAATGATATGCTTGAA+GGG - chr1_2:36692667-36692686 None:intergenic 25.0%
!!! AGCATATCATTTTTGAGTTT+CGG + chr1_2:36692671-36692690 Msa0069080:intron 25.0%
!!! TTTAATTGGTCCTTATTTTG+AGG + chr1_2:36692736-36692755 Msa0069080:intron 25.0%
!!! TTAATTGGTCCTTATTTTGA+GGG + chr1_2:36692737-36692756 Msa0069080:intron 25.0%
!!! TATTTTAGTCCCTCAAAATA+AGG - chr1_2:36692749-36692768 None:intergenic 25.0%
! CCTGCAAAATTTATTCATAT+TGG - chr1_2:36692795-36692814 None:intergenic 25.0%
!! CCAATATGAATAAATTTTGC+AGG + chr1_2:36692792-36692811 Msa0069080:intron 25.0%
! CAAGGAGAAAAAACAAAAAA+TGG + chr1_2:36692892-36692911 Msa0069080:intron 25.0%
!! AGAGATTTGTTCTTTGAAAA+AGG + chr1_2:36692984-36693003 Msa0069080:intron 25.0%
! TGATAAGAATAGTAATTCAG+AGG + chr1_2:36693447-36693466 Msa0069080:intron 25.0%
!!! TCTAGAACTTTCCAATTTTA+GGG - chr1_2:36693872-36693891 None:intergenic 25.0%
!! TTTTGACAATCCTGAATATT+TGG + chr1_2:36693922-36693941 Msa0069080:intron 25.0%
! TATGTATCAACCAAATATTC+AGG - chr1_2:36693935-36693954 None:intergenic 25.0%
! AATTTCTTGATGCAAAACAA+TGG - chr1_2:36694000-36694019 None:intergenic 25.0%
! TTCTTATTGTAGAGTAAATG+TGG - chr1_2:36694245-36694264 None:intergenic 25.0%
! AAGAATTATCCAACTAATTG+TGG + chr1_2:36694260-36694279 Msa0069080:intron 25.0%
!! AATTATTGTCAAAGTGTCAT+TGG - chr1_2:36694342-36694361 None:intergenic 25.0%
!!! ATGTTGGTTTTTAAAATAGG+GGG - chr1_2:36694891-36694910 None:intergenic 25.0%
! TAAATTTATGGATGAAGATG+AGG + chr1_2:36694638-36694657 Msa0069080:intron 25.0%
! AAAACAAAACTTCTCCATTT+AGG + chr1_2:36694769-36694788 Msa0069080:intron 25.0%
! AAACAAAACTTCTCCATTTA+GGG + chr1_2:36694770-36694789 Msa0069080:intron 25.0%
!!! ATGTTGGTTTTTAAAATAGG+GGG + chr1_2:36694891-36694910 Msa0069080:intron 25.0%
!! AACTCCCTTTTTATGATAAA+AGG + chr1_2:36694919-36694938 Msa0069080:intron 25.0%
!! ACTCCCTTTTTATGATAAAA+GGG + chr1_2:36694920-36694939 Msa0069080:intron 25.0%
! CTAGCAAAAAGAAAGAAAAA+AGG + chr1_2:36695304-36695323 Msa0069080:intron 25.0%
! AGCAAAAAGAAAGAAAAAAG+GGG + chr1_2:36695306-36695325 Msa0069080:intron 25.0%
! AATTCAAGAAAAAGACTCAA+TGG + chr1_2:36695953-36695972 Msa0069080:intron 25.0%
!!! TTGTTTTATAGTAGGGTATT+GGG - chr1_2:36696026-36696045 None:intergenic 25.0%
!!! TTTGTTTTATAGTAGGGTAT+TGG - chr1_2:36696027-36696046 None:intergenic 25.0%
! AGAATAGAAAGAGAAAACTA+GGG - chr1_2:36696059-36696078 None:intergenic 25.0%
! TAGAATAGAAAGAGAAAACT+AGG - chr1_2:36696060-36696079 None:intergenic 25.0%
! TGATGTATCAAGTCTATATT+AGG - chr1_2:36696582-36696601 None:intergenic 25.0%
! TGATGTATCAAGTCTATATT+AGG - chr1_2:36696582-36696601 None:intergenic 25.0%
!! ATACTACGGAATCATTTTAA+GGG - chr1_2:36696901-36696920 None:intergenic 25.0%
!! AATACTACGGAATCATTTTA+AGG - chr1_2:36696902-36696921 None:intergenic 25.0%
! ATCTTATGGTAGTAATACTA+CGG - chr1_2:36696915-36696934 None:intergenic 25.0%
! AGAAATAAATAAATCGCTGT+GGG - chr1_2:36697006-36697025 None:intergenic 25.0%
! AAGAAATAAATAAATCGCTG+TGG - chr1_2:36697007-36697026 None:intergenic 25.0%
! TGCTAAGCTTAATAACAAAA+TGG + chr1_2:36697435-36697454 Msa0069080:three_prime_UTR 25.0%
! GCTAAGCTTAATAACAAAAT+GGG + chr1_2:36697436-36697455 Msa0069080:three_prime_UTR 25.0%
! TTGAAGAAAATTGAGATTGT+TGG + chr1_2:36697466-36697485 Msa0069080:three_prime_UTR 25.0%
! ACAACCTTAAAAGAATTATC+AGG + chr1_2:36697626-36697645 Msa0069080:three_prime_UTR 25.0%
! AATGCAAGCATCAATATATA+GGG - chr1_2:36697857-36697876 None:intergenic 25.0%
! TTATAGAATGATGTCCTTAT+AGG + chr1_2:36697933-36697952 Msa0069080:intron 25.0%
! ATAAATGAAGGGAAAAACTT+AGG + chr1_2:36697993-36698012 Msa0069080:intron 25.0%
!!! AAGTTTGTTTTATCCAACAA+AGG - chr1_2:36698065-36698084 None:intergenic 25.0%
! TTATGGATTTGATGAAATCA+TGG + chr1_2:36698093-36698112 Msa0069080:intron 25.0%
! AAACTATAAGAAACTAAGAC+GGG - chr1_2:36698319-36698338 None:intergenic 25.0%
! GAAACTATAAGAAACTAAGA+CGG - chr1_2:36698320-36698339 None:intergenic 25.0%
! AGTATTGTGATGTTATTAAG+AGG + chr1_2:36698549-36698568 Msa0069080:three_prime_UTR 25.0%
!! TACTTATTCTTTTCTGTTTC+CGG + chr1_2:36698968-36698987 Msa0069080:intron 25.0%
! GTCATTGAATAAAATTCTAG+AGG + chr1_2:36699478-36699497 Msa0069080:three_prime_UTR 25.0%
! CCTGATAGTATACTAATTAA+GGG - chr1_2:36699691-36699710 None:intergenic 25.0%
! CCTTAATTAGTATACTATCA+GGG + chr1_2:36699689-36699708 Msa0069080:intron 25.0%
! CTTAATTAGTATACTATCAG+GGG + chr1_2:36699690-36699709 Msa0069080:intron 25.0%
!! AGAAAATGTCACAACTTTTA+CGG + chr1_2:36699907-36699926 Msa0069080:intron 25.0%
! CTAACTTATAACTAGAAAAC+TGG - chr1_2:36700303-36700322 None:intergenic 25.0%
!!! GTTTTCTAGTTATAAGTTAG+CGG + chr1_2:36700303-36700322 Msa0069080:intron 25.0%
!!! TTAGAAAAGCAATTTTCAAG+TGG + chr1_2:36700387-36700406 Msa0069080:intron 25.0%
! ACATTTAGTGAACAAAGTAA+AGG - chr1_2:36700420-36700439 None:intergenic 25.0%
!! TTCACTAAATGTTTGTTTCT+TGG + chr1_2:36700428-36700447 Msa0069080:intron 25.0%
! TATTCTACTAATTCTAAACG+AGG - chr1_2:36700529-36700548 None:intergenic 25.0%
! TAGACTTAAATTGAAGTCTT+TGG + chr1_2:36700597-36700616 Msa0069080:intron 25.0%
!! TGTATGAGTTTCAAATTTTG+TGG + chr1_2:36700773-36700792 Msa0069080:three_prime_UTR 25.0%
! TAATAAAGTACGGAAACTTA+AGG + chr1_2:36700900-36700919 Msa0069080:three_prime_UTR 25.0%
! AATAAAGTACGGAAACTTAA+GGG + chr1_2:36700901-36700920 Msa0069080:three_prime_UTR 25.0%
GAAAGTCAAAACCCTAAAAA+TGG + chr1_2:36691890-36691909 Msa0069080:CDS 30.0%
TGTTGGATTTGGATTTGAAT+TGG - chr1_2:36691979-36691998 None:intergenic 30.0%
TTTGATGAATTTACGTGCAT+AGG + chr1_2:36692063-36692082 Msa0069080:intron 30.0%
TATCATGATAAGCTGAAAAC+AGG - chr1_2:36692255-36692274 None:intergenic 30.0%
ATCAACTTATTTGCAGCTTA+CGG - chr1_2:36692288-36692307 None:intergenic 30.0%
! ACAAACATGTTAGACTTTTC+TGG - chr1_2:36692482-36692501 None:intergenic 30.0%
! AAAGTCTAACATGTTTGTTG+AGG + chr1_2:36692484-36692503 Msa0069080:intron 30.0%
CAAAAAAATGGTAAACTTGC+AGG - chr1_2:36692613-36692632 None:intergenic 30.0%
!!! CTGCAAGTTTACCATTTTTT+TGG + chr1_2:36692611-36692630 Msa0069080:intron 30.0%
CTCAAAAATGATATGCTTGA+AGG - chr1_2:36692668-36692687 None:intergenic 30.0%
! TCTAGTACTTCTCAGTTTTA+GGG + chr1_2:36693066-36693085 Msa0069080:intron 30.0%
TGAACAGTAGATCAAATAGA+AGG + chr1_2:36693203-36693222 Msa0069080:intron 30.0%
TAATCCTCAAACATTTGCTT+AGG + chr1_2:36693259-36693278 Msa0069080:intron 30.0%
TAAGCAAGATAAAACTCACA+GGG - chr1_2:36693363-36693382 None:intergenic 30.0%
TTAAGCAAGATAAAACTCAC+AGG - chr1_2:36693364-36693383 None:intergenic 30.0%
GACTTCTTCCATTAAAAGAA+TGG - chr1_2:36693413-36693432 None:intergenic 30.0%
!! CTTTCCAATTTTAGGGATTA+TGG - chr1_2:36693865-36693884 None:intergenic 30.0%
!! GTCTAGAACTTTCCAATTTT+AGG - chr1_2:36693873-36693892 None:intergenic 30.0%
! TCAGGATTGTCAAAATTTTC+AGG - chr1_2:36693917-36693936 None:intergenic 30.0%
!! AGTCTTGTTAAATTGAGTGA+TGG + chr1_2:36694190-36694209 Msa0069080:intron 30.0%
GTGGCAATGTCTAAATTTAT+GGG + chr1_2:36694483-36694502 Msa0069080:intron 30.0%
AATCTTCATCTCTTCATCAA+TGG - chr1_2:36694668-36694687 None:intergenic 30.0%
GATGAAGAGATGAAGATTAA+TGG + chr1_2:36694670-36694689 Msa0069080:intron 30.0%
AACAAAACTTCTCCATTTAG+GGG + chr1_2:36694771-36694790 Msa0069080:intron 30.0%
! CTCCCTTTTTATGATAAAAG+GGG + chr1_2:36694921-36694940 Msa0069080:intron 30.0%
! GTCCCCTTTTATCATAAAAA+GGG - chr1_2:36694926-36694945 None:intergenic 30.0%
GCAAAAAGAAAGAAAAAAGG+GGG + chr1_2:36695307-36695326 Msa0069080:intron 30.0%
AAAAAAGGGGGTAAAGAAAA+AGG + chr1_2:36695319-36695338 Msa0069080:intron 30.0%
! CATCTTTCACGTTTGAAATT+TGG - chr1_2:36695468-36695487 None:intergenic 30.0%
CTTGAATATAAGCAAAGTGT+TGG - chr1_2:36695553-36695572 None:intergenic 30.0%
ATAGATAGTTAACATGCTCT+TGG + chr1_2:36695583-36695602 Msa0069080:intron 30.0%
TCTTTATGTCTTCTGCAATT+TGG - chr1_2:36695623-36695642 None:intergenic 30.0%
AAGACTCAATGGTTGTTAAA+TGG + chr1_2:36695964-36695983 Msa0069080:intron 30.0%
AGACTCAATGGTTGTTAAAT+GGG + chr1_2:36695965-36695984 Msa0069080:intron 30.0%
AGTCCAAATCAGAAATAGAT+TGG + chr1_2:36695994-36696013 Msa0069080:intron 30.0%
GTCCAAATCAGAAATAGATT+GGG + chr1_2:36695995-36696014 Msa0069080:intron 30.0%
!! CAGCTTTAGAATAGAAAAAG+TGG - chr1_2:36696107-36696126 None:intergenic 30.0%
!! AATTGGCTTAAATGCACTTT+TGG - chr1_2:36696522-36696541 None:intergenic 30.0%
CTTTATGTATGATACTACTC+CGG - chr1_2:36696753-36696772 None:intergenic 30.0%
GAAGAAGGATAAAGGAAAAA+CGG - chr1_2:36696781-36696800 None:intergenic 30.0%
TAGATACTGAAGAAGGATAA+AGG - chr1_2:36696789-36696808 None:intergenic 30.0%
ACTACCATAAGATTCAATAC+TGG + chr1_2:36696922-36696941 Msa0069080:intron 30.0%
! AGATCCAGTATTGAATCTTA+TGG - chr1_2:36696929-36696948 None:intergenic 30.0%
AAATAAATAAATCGCTGTGG+GGG - chr1_2:36697004-36697023 None:intergenic 30.0%
GAAATAAATAAATCGCTGTG+GGG - chr1_2:36697005-36697024 None:intergenic 30.0%
GATGTAGGAAAAATTGTTCA+AGG + chr1_2:36697111-36697130 Msa0069080:intron 30.0%
! TCTACGGCAATAACTATTTT+TGG + chr1_2:36697160-36697179 Msa0069080:intron 30.0%
CATTTAGTTAAACTGAGGAT+TGG + chr1_2:36697186-36697205 Msa0069080:intron 30.0%
! TCAAAATATGGATTGCTGAT+TGG + chr1_2:36697410-36697429 Msa0069080:exon 30.0%
AAGCTTAATAACAAAATGGG+TGG + chr1_2:36697439-36697458 Msa0069080:three_prime_UTR 30.0%
! GGAACCTGATAATTCTTTTA+AGG - chr1_2:36697633-36697652 None:intergenic 30.0%
TCATATGATCCACTGAATAA+TGG + chr1_2:36697677-36697696 Msa0069080:intron 30.0%
!!! GTTTGGCTTTTCCAATTTAT+AGG + chr1_2:36697719-36697738 Msa0069080:intron 30.0%
ATTTGGCTACACCTATAAAT+TGG - chr1_2:36697733-36697752 None:intergenic 30.0%
TTATAGGTGTAGCCAAATTA+TGG + chr1_2:36697735-36697754 Msa0069080:intron 30.0%
TATAGGTGTAGCCAAATTAT+GGG + chr1_2:36697736-36697755 Msa0069080:intron 30.0%
CAATGCAAGCATCAATATAT+AGG - chr1_2:36697858-36697877 None:intergenic 30.0%
AAACTTAGGTGCAATTCTTT+AGG + chr1_2:36698007-36698026 Msa0069080:intron 30.0%
! TTCTTTAGGTGCTTTTCATA+TGG + chr1_2:36698021-36698040 Msa0069080:intron 30.0%
AACTGAAAATACACCTTTGT+TGG + chr1_2:36698049-36698068 Msa0069080:intron 30.0%
TGCAATGTTAGTTGTGAAAA+TGG + chr1_2:36698194-36698213 Msa0069080:intron 30.0%
!! ATGTTGTGCTGTTTATTATG+TGG + chr1_2:36698400-36698419 Msa0069080:intron 30.0%
AATAACATCACAATACTCTC+TGG - chr1_2:36698546-36698565 None:intergenic 30.0%
CCATGTAAATGGATGATAAA+GGG - chr1_2:36698732-36698751 None:intergenic 30.0%
TCCATGTAAATGGATGATAA+AGG - chr1_2:36698733-36698752 None:intergenic 30.0%
TTTATCATCCATTTACATGG+AGG + chr1_2:36698732-36698751 Msa0069080:three_prime_UTR 30.0%
GACTGTTCAATCTTTGTATT+TGG + chr1_2:36699060-36699079 Msa0069080:intron 30.0%
TCTTTGTATTTGGATATCAC+AGG + chr1_2:36699070-36699089 Msa0069080:intron 30.0%
ATTTAATGTACTCCAAGCAT+GGG - chr1_2:36699154-36699173 None:intergenic 30.0%
TATTTAATGTACTCCAAGCA+TGG - chr1_2:36699155-36699174 None:intergenic 30.0%
ACAGTAAATTCGTTAAACCA+AGG - chr1_2:36699188-36699207 None:intergenic 30.0%
TTGGTTTAACGAATTTACTG+TGG + chr1_2:36699187-36699206 Msa0069080:three_prime_UTR 30.0%
GTTCAAAATGAGGAAATAGA+AGG - chr1_2:36699247-36699266 None:intergenic 30.0%
GATTCTTGCATTCAATTGTT+TGG + chr1_2:36699339-36699358 Msa0069080:intron 30.0%
AAAGATGCATAAACATAACC+AGG - chr1_2:36699512-36699531 None:intergenic 30.0%
ATCTCTACTATCTATGTACT+AGG + chr1_2:36699560-36699579 Msa0069080:intron 30.0%
! CAGAATTGTCTTATTCGTAT+TGG + chr1_2:36699600-36699619 Msa0069080:intron 30.0%
CCCTTAATTAGTATACTATC+AGG + chr1_2:36699688-36699707 Msa0069080:intron 30.0%
CCCTGATAGTATACTAATTA+AGG - chr1_2:36699692-36699711 None:intergenic 30.0%
!! TTTTAATTAAATACCCCCTC+TGG + chr1_2:36699837-36699856 Msa0069080:intron 30.0%
TTATTATAACAAGGACCAGA+GGG - chr1_2:36699855-36699874 None:intergenic 30.0%
TTTATTATAACAAGGACCAG+AGG - chr1_2:36699856-36699875 None:intergenic 30.0%
! AATAGTGGGAATGACATATA+TGG + chr1_2:36699947-36699966 Msa0069080:intron 30.0%
! ATAGTGGGAATGACATATAT+GGG + chr1_2:36699948-36699967 Msa0069080:intron 30.0%
TATAGCAGTTATGCTTTACT+TGG - chr1_2:36700139-36700158 None:intergenic 30.0%
!!! ATCTTTTTTTGGGGTTATGA+TGG + chr1_2:36700188-36700207 Msa0069080:intron 30.0%
! CATGTGTTTCTAAGAAACAT+TGG - chr1_2:36700244-36700263 None:intergenic 30.0%
CAATGTTTCTTAGAAACACA+TGG + chr1_2:36700242-36700261 Msa0069080:intron 30.0%
ACTTATAACTAGAAAACTGG+CGG - chr1_2:36700300-36700319 None:intergenic 30.0%
!!! AAGCAATTTTCAAGTGGTAT+TGG + chr1_2:36700393-36700412 Msa0069080:intron 30.0%
! AATTTTGTGGTATGCATCTT+TGG + chr1_2:36700786-36700805 Msa0069080:three_prime_UTR 30.0%
! ATTTTGTGGTATGCATCTTT+GGG + chr1_2:36700787-36700806 Msa0069080:three_prime_UTR 30.0%
ATATTCTTACAGATGCCAAA+GGG - chr1_2:36700823-36700842 None:intergenic 30.0%
AATATTCTTACAGATGCCAA+AGG - chr1_2:36700824-36700843 None:intergenic 30.0%
!!! TTCGTGTAGTTTTTTTGTTG+CGG + chr1_2:36700842-36700861 Msa0069080:three_prime_UTR 30.0%
!!! TGCTTCTTCTGCCATTTTTA+GGG - chr1_2:36691904-36691923 None:intergenic 35.0%
GAGAGAAGAGAAAATTACTG+CGG - chr1_2:36692002-36692021 None:intergenic 35.0%
TCAAAACCATCGTAACAAAC+AGG - chr1_2:36692188-36692207 None:intergenic 35.0%
TAAGCTGAAAACAGGTAATG+AGG - chr1_2:36692247-36692266 None:intergenic 35.0%
ACACTTGTATTGAGTAGTGT+AGG - chr1_2:36692368-36692387 None:intergenic 35.0%
TAGATTTGCATATATGCCCA+AGG + chr1_2:36692414-36692433 Msa0069080:intron 35.0%
!!! CATTTTTGAGTTTCGGTCTT+AGG + chr1_2:36692678-36692697 Msa0069080:intron 35.0%
! GACATACAACGTTTTGCTTT+TGG - chr1_2:36692840-36692859 None:intergenic 35.0%
! GTCTAGTACTTCTCAGTTTT+AGG + chr1_2:36693065-36693084 Msa0069080:intron 35.0%
!! AGATCAAATAGAAGGTGTTC+TGG + chr1_2:36693211-36693230 Msa0069080:intron 35.0%
! GTGATCTGCCATTCTTTTAA+TGG + chr1_2:36693402-36693421 Msa0069080:intron 35.0%
AGCCAAATATCCTTCTAACA+GGG - chr1_2:36693510-36693529 None:intergenic 35.0%
AAGCCAAATATCCTTCTAAC+AGG - chr1_2:36693511-36693530 None:intergenic 35.0%
! ACCATTTAAGAGTATGCTTC+TGG - chr1_2:36693587-36693606 None:intergenic 35.0%
TTGGTTGTAACTGATCTCAT+AGG - chr1_2:36693674-36693693 None:intergenic 35.0%
TAGTCGATCAAATAGAAGAG+TGG - chr1_2:36693716-36693735 None:intergenic 35.0%
AGGTCCATAATCCCTAAAAT+TGG + chr1_2:36693858-36693877 Msa0069080:intron 35.0%
TGTCATTGGATTATGGTGAA+GGG - chr1_2:36694328-36694347 None:intergenic 35.0%
! GTCAAAGTGTCATTGGATTA+TGG - chr1_2:36694335-36694354 None:intergenic 35.0%
AATTCATGCATTTGTCCCTT+CGG + chr1_2:36694358-36694377 Msa0069080:intron 35.0%
AAAGTGCAATTAAGACCGAA+GGG - chr1_2:36694376-36694395 None:intergenic 35.0%
ATGCCACATCAACCAAATTT+GGG - chr1_2:36694449-36694468 None:intergenic 35.0%
AATGCCACATCAACCAAATT+TGG - chr1_2:36694814-36694833 None:intergenic 35.0%
CGTGGCAATGTCTAAATTTA+TGG + chr1_2:36694482-36694501 Msa0069080:intron 35.0%
TTATGGGTATGTTGACAAGT+TGG + chr1_2:36694499-36694518 Msa0069080:intron 35.0%
TATGGGTATGTTGACAAGTT+GGG + chr1_2:36694500-36694519 Msa0069080:intron 35.0%
! AACCAAATTGACTCCACATT+GGG + chr1_2:36694825-36694844 Msa0069080:intron 35.0%
AAAACTGGGGACTAAAATGT+TGG + chr1_2:36694875-36694894 Msa0069080:intron 35.0%
! GGTCCCCTTTTATCATAAAA+AGG - chr1_2:36694927-36694946 None:intergenic 35.0%
! CACTTTGACAACTATGCTTT+TGG - chr1_2:36694948-36694967 None:intergenic 35.0%
! CAAAAGCATAGTTGTCAAAG+TGG + chr1_2:36694946-36694965 Msa0069080:intron 35.0%
!!! AAGTTTTTGGTGGTTGTTTC+CGG - chr1_2:36696229-36696248 None:intergenic 35.0%
AACCACCAAAAACTTAGATC+CGG + chr1_2:36696234-36696253 Msa0069080:intron 35.0%
!!! GAGTTTTTGGTGCTTGTTTT+CGG - chr1_2:36696302-36696321 None:intergenic 35.0%
CGGAGTAGTATCATACATAA+AGG + chr1_2:36696751-36696770 Msa0069080:intron 35.0%
AAGGATAAAGGAAAAACGGT+TGG - chr1_2:36696777-36696796 None:intergenic 35.0%
!!! TTTTAGGCTTTCAGGTTTCT+GGG - chr1_2:36697030-36697049 None:intergenic 35.0%
!!! TGTCAAGTATGGCTTGTTTT+AGG - chr1_2:36697046-36697065 None:intergenic 35.0%
TTGTTCAAGGTGAGATTCTA+TGG + chr1_2:36697124-36697143 Msa0069080:intron 35.0%
GGTGACATTTAGTTAAACTG+AGG + chr1_2:36697181-36697200 Msa0069080:intron 35.0%
!!! CAGCAATCCATATTTTGACT+AGG - chr1_2:36697408-36697427 None:intergenic 35.0%
TCCAAATTTCGATCAAGTAG+CGG - chr1_2:36697492-36697511 None:intergenic 35.0%
! GAGGAAAAGTTGAGTTTTTG+TGG + chr1_2:36697536-36697555 Msa0069080:three_prime_UTR 35.0%
ATTCCAGATCCATTATTCAG+TGG - chr1_2:36697689-36697708 None:intergenic 35.0%
!! CTGGAATGTTGTTTCATGTT+TGG + chr1_2:36697702-36697721 Msa0069080:intron 35.0%
TGGATAGAATATTTGAGCAG+CGG - chr1_2:36697785-36697804 None:intergenic 35.0%
!!! TGCTGACATTTTTTTCCTCA+AGG + chr1_2:36697816-36697835 Msa0069080:three_prime_UTR 35.0%
AACCATACGAAAAGCAACTT+AGG + chr1_2:36698130-36698149 Msa0069080:intron 35.0%
!!! TTCCTAAGTTGCTTTTCGTA+TGG - chr1_2:36698135-36698154 None:intergenic 35.0%
TCATACAGTTAACACATCCA+AGG - chr1_2:36698249-36698268 None:intergenic 35.0%
AACTTCAAGTGTTCTGTTCT+TGG + chr1_2:36698288-36698307 Msa0069080:intron 35.0%
ATTACGGTGTGATAAGATGA+CGG - chr1_2:36698585-36698604 None:intergenic 35.0%
GAAAGGAAATCTGGAGATTA+CGG - chr1_2:36698601-36698620 None:intergenic 35.0%
TCCTTTCAGCTAGTGTATAT+TGG + chr1_2:36698614-36698633 Msa0069080:intron 35.0%
TCCAATATACACTAGCTGAA+AGG - chr1_2:36698618-36698637 None:intergenic 35.0%
GTCACTTACTAATTGATCCT+CGG + chr1_2:36698646-36698665 Msa0069080:intron 35.0%
TCACTTACTAATTGATCCTC+GGG + chr1_2:36698647-36698666 Msa0069080:intron 35.0%
! TGATTTTCAGACATGTTACC+TGG + chr1_2:36698670-36698689 Msa0069080:intron 35.0%
CCCTTTATCATCCATTTACA+TGG + chr1_2:36698729-36698748 Msa0069080:three_prime_UTR 35.0%
GGAACATGAAGTTCAAAATG+AGG - chr1_2:36699257-36699276 None:intergenic 35.0%
AGTAGTTTCCTAAACCATTC+TGG + chr1_2:36699289-36699308 Msa0069080:intron 35.0%
TTCATGCTTTCATTCTACGT+AGG + chr1_2:36699372-36699391 Msa0069080:intron 35.0%
! ATTCTAGAGGTAATGTTTCC+TGG + chr1_2:36699491-36699510 Msa0069080:intron 35.0%
TGTTAACCGAAAAACGACTA+AGG + chr1_2:36699751-36699770 Msa0069080:intron 35.0%
GTTAACCGAAAAACGACTAA+GGG + chr1_2:36699752-36699771 Msa0069080:intron 35.0%
!!! ACAAACCCTTAGTCGTTTTT+CGG - chr1_2:36699760-36699779 None:intergenic 35.0%
! AAAACGACTAAGGGTTTGTT+TGG + chr1_2:36699761-36699780 Msa0069080:intron 35.0%
! AAGGGTTTGTTTGGTTCAAA+CGG + chr1_2:36699770-36699789 Msa0069080:intron 35.0%
TATTATAACAAGGACCAGAG+GGG - chr1_2:36699854-36699873 None:intergenic 35.0%
AGTTATGCTTTACTTGGACA+AGG - chr1_2:36700133-36700152 None:intergenic 35.0%
! TTTGGGGTTATGATGGTAAT+TGG + chr1_2:36700195-36700214 Msa0069080:intron 35.0%
TATGATGGTAATTGGCATGA+TGG + chr1_2:36700203-36700222 Msa0069080:intron 35.0%
!!! TTTTTGAAGTGTTGCCTTAC+AGG - chr1_2:36700464-36700483 None:intergenic 35.0%
AGAGCTACTAAAAAGAGTCA+AGG + chr1_2:36700499-36700518 Msa0069080:three_prime_UTR 35.0%
!! AATTGAAGTCTTTGGTTTGC+AGG + chr1_2:36700605-36700624 Msa0069080:intron 35.0%
GTTTCATTTGTGAAATACGG+TGG + chr1_2:36700727-36700746 Msa0069080:three_prime_UTR 35.0%
! TTTTGTGGTATGCATCTTTG+GGG + chr1_2:36700788-36700807 Msa0069080:three_prime_UTR 35.0%
!!! CTGCTTCTTCTGCCATTTTT+AGG - chr1_2:36691905-36691924 None:intergenic 40.0%
! AATTACTGCGGTGTTGGATT+TGG - chr1_2:36691990-36692009 None:intergenic 40.0%
AGAGAAAATTACTGCGGTGT+TGG - chr1_2:36691996-36692015 None:intergenic 40.0%
! TTTGAGATCGTGAGAAGCAT+CGG + chr1_2:36692107-36692126 Msa0069080:CDS 40.0%
!!! TACGATGGTTTTGAACCTTC+TGG + chr1_2:36692194-36692213 Msa0069080:intron 40.0%
TTATCCAATTAGGCCCATAG+TGG + chr1_2:36692307-36692326 Msa0069080:intron 40.0%
! TTTTCCACTATGGGCCTAAT+TGG - chr1_2:36692314-36692333 None:intergenic 40.0%
CAAAACGTTGTATGTCTGCA+GGG + chr1_2:36692844-36692863 Msa0069080:intron 40.0%
TCAAGATTGTCCACAGTATG+TGG + chr1_2:36693022-36693041 Msa0069080:intron 40.0%
TGATGTTATGCCACATACTG+TGG - chr1_2:36693035-36693054 None:intergenic 40.0%
CTGGTTGTAACGAATCTCAT+AGG + chr1_2:36693230-36693249 Msa0069080:intron 40.0%
GCAACCTAAGCAAATGTTTG+AGG - chr1_2:36693266-36693285 None:intergenic 40.0%
GGATAATTCAGAGCTCTTAG+AGG - chr1_2:36693478-36693497 None:intergenic 40.0%
CCAAATATCCTTCTAACAGG+GGG - chr1_2:36693508-36693527 None:intergenic 40.0%
GCCAAATATCCTTCTAACAG+GGG - chr1_2:36693509-36693528 None:intergenic 40.0%
! GCCAGAAGCATACTCTTAAA+TGG + chr1_2:36693583-36693602 Msa0069080:intron 40.0%
AAGATCTCGAACATGTGATG+TGG - chr1_2:36693836-36693855 None:intergenic 40.0%
TCACATGTTCGAGATCTTCA+AGG + chr1_2:36693838-36693857 Msa0069080:intron 40.0%
!! ATAACAAGAGTGTCGTGTGA+TGG - chr1_2:36694133-36694152 None:intergenic 40.0%
GTTGAGACACCACAATTAGT+TGG - chr1_2:36694272-36694291 None:intergenic 40.0%
TTGGATTATGGTGAAGGGTA+GGG - chr1_2:36694323-36694342 None:intergenic 40.0%
ATTGGATTATGGTGAAGGGT+AGG - chr1_2:36694324-36694343 None:intergenic 40.0%
! GTGTCATTGGATTATGGTGA+AGG - chr1_2:36694329-36694348 None:intergenic 40.0%
CAAAGTGCAATTAAGACCGA+AGG - chr1_2:36694377-36694396 None:intergenic 40.0%
CTTCGGTCTTAATTGCACTT+TGG + chr1_2:36694375-36694394 Msa0069080:intron 40.0%
CAAAACTGGGACCAAAATGT+TGG - chr1_2:36694418-36694437 None:intergenic 40.0%
!! CAACATTTTGGTCCCAGTTT+TGG + chr1_2:36694416-36694435 Msa0069080:intron 40.0%
AGACATTGCCACGTCATTAA+TGG - chr1_2:36694475-36694494 None:intergenic 40.0%
ATGGGTATGTTGACAAGTTG+GGG + chr1_2:36694501-36694520 Msa0069080:intron 40.0%
! TGGAGTCAATTTGGTTGATG+TGG - chr1_2:36694821-36694840 None:intergenic 40.0%
! CAACCAAATTGACTCCACAT+TGG + chr1_2:36694824-36694843 Msa0069080:intron 40.0%
! ACCAAATTGACTCCACATTG+GGG + chr1_2:36694826-36694845 Msa0069080:intron 40.0%
TAGTTGTCAAAGTGGAAACG+CGG + chr1_2:36694954-36694973 Msa0069080:intron 40.0%
! AACTTGCGCAAGGGTAATTT+TGG - chr1_2:36695392-36695411 None:intergenic 40.0%
GTATCTGTGCAATCAAAAGC+AGG - chr1_2:36695740-36695759 None:intergenic 40.0%
ACTCACGCAAGTGTAAATAC+AGG + chr1_2:36695835-36695854 Msa0069080:intron 40.0%
!! GGCCCAATCTATTTCTGATT+TGG - chr1_2:36696000-36696019 None:intergenic 40.0%
!! TTATAGTAGGGTATTGGGCT+AGG - chr1_2:36696021-36696040 None:intergenic 40.0%
TGTAGAGAAGGAAGAGGAAA+AGG - chr1_2:36696189-36696208 None:intergenic 40.0%
! AACGACCGGATCTAAGTTTT+TGG - chr1_2:36696242-36696261 None:intergenic 40.0%
!! TGCTTGTTTTCGGTTAGATC+CGG - chr1_2:36696292-36696311 None:intergenic 40.0%
AAGCACCAAAAACTCAGATC+CGG + chr1_2:36696307-36696326 Msa0069080:intron 40.0%
!!! GTTTTAGGCTTTCAGGTTTC+TGG - chr1_2:36697031-36697050 None:intergenic 40.0%
!!! ATGGCTTGTTTTAGGCTTTC+AGG - chr1_2:36697038-36697057 None:intergenic 40.0%
CACACATCTGATGTCAAGTA+TGG - chr1_2:36697057-36697076 None:intergenic 40.0%
!! AGTTGTTGAAGGTGTTGTAC+TGG + chr1_2:36697273-36697292 Msa0069080:intron 40.0%
!!! TATTTTGACTAGGCAACCAG+CGG - chr1_2:36697398-36697417 None:intergenic 40.0%
CTGGTTGCCTAGTCAAAATA+TGG + chr1_2:36697398-36697417 Msa0069080:CDS 40.0%
ATCGAAATTTGGAAAGCCGT+TGG + chr1_2:36697499-36697518 Msa0069080:three_prime_UTR 40.0%
TCGAAATTTGGAAAGCCGTT+GGG + chr1_2:36697500-36697519 Msa0069080:three_prime_UTR 40.0%
TGAGCTATATCCAACACAAG+AGG - chr1_2:36697601-36697620 None:intergenic 40.0%
!! GATCCACTGAATAATGGATC+TGG + chr1_2:36697683-36697702 Msa0069080:intron 40.0%
AAAGAGTGAACTTCACCTTG+AGG - chr1_2:36697834-36697853 None:intergenic 40.0%
ATGTCCTTATAGGCTTGTGA+TGG + chr1_2:36697943-36697962 Msa0069080:intron 40.0%
ACATCCATCACAAGCCTATA+AGG - chr1_2:36697950-36697969 None:intergenic 40.0%
ATGATAGATGTTCACAGCCT+TGG + chr1_2:36698229-36698248 Msa0069080:intron 40.0%
TTCTCTGATCCATTCCCAAT+TGG - chr1_2:36698508-36698527 None:intergenic 40.0%
TTACGGTGTGATAAGATGAC+GGG - chr1_2:36698584-36698603 None:intergenic 40.0%
ACACTAGCTGAAAGGAAATC+TGG - chr1_2:36698610-36698629 None:intergenic 40.0%
ATGTTACCTGGTCTACAACA+AGG + chr1_2:36698682-36698701 Msa0069080:three_prime_UTR 40.0%
TGTTACCTGGTCTACAACAA+GGG + chr1_2:36698683-36698702 Msa0069080:three_prime_UTR 40.0%
CTCTTCATCCTCCATGTAAA+TGG - chr1_2:36698743-36698762 None:intergenic 40.0%
CATTTACATGGAGGATGAAG+AGG + chr1_2:36698741-36698760 Msa0069080:three_prime_UTR 40.0%
TGAAGAGGTAAGCTGCTAAA+AGG + chr1_2:36698756-36698775 Msa0069080:intron 40.0%
GAAGAGGTAAGCTGCTAAAA+GGG + chr1_2:36698757-36698776 Msa0069080:intron 40.0%
TTTCCTTCCACAATCTTTGG+CGG - chr1_2:36699131-36699150 None:intergenic 40.0%
GTTTCCTAAACCATTCTGGT+TGG + chr1_2:36699293-36699312 Msa0069080:intron 40.0%
!! TAAACCATTCTGGTTGGCTT+CGG + chr1_2:36699299-36699318 Msa0069080:intron 40.0%
! TTGATTGCCGACTATGAAAG+CGG + chr1_2:36699416-36699435 Msa0069080:three_prime_UTR 40.0%
TAACTCTCCGCTTTCATAGT+CGG - chr1_2:36699426-36699445 None:intergenic 40.0%
TTCAATGACTTCGACAAAGC+CGG - chr1_2:36699467-36699486 None:intergenic 40.0%
! GTTTGTTTGGTTCAAACGGA+GGG + chr1_2:36699774-36699793 Msa0069080:intron 40.0%
TAGAGATTTCCATGGAAGGT+GGG + chr1_2:36699797-36699816 Msa0069080:intron 40.0%
ATTATAACAAGGACCAGAGG+GGG - chr1_2:36699853-36699872 None:intergenic 40.0%
GGAATGACATATATGGGCAT+GGG + chr1_2:36699954-36699973 Msa0069080:intron 40.0%
AAATACTTAAATGCCCCCAG+CGG - chr1_2:36700339-36700358 None:intergenic 40.0%
TTGGAAATATGCAGCCTGTA+AGG + chr1_2:36700447-36700466 Msa0069080:intron 40.0%
! CGGAAACTTAAGGGTATGTT+CGG + chr1_2:36700910-36700929 Msa0069080:three_prime_UTR 40.0%
! ACTTAAGGGTATGTTCGGAT+TGG + chr1_2:36700915-36700934 Msa0069080:three_prime_UTR 40.0%
! CAATGATTCCAGTGCTACTG+CGG - chr1_2:36691934-36691953 None:intergenic 45.0%
!! GGTTGATGATGATTCAGCGA+CGG - chr1_2:36691958-36691977 None:intergenic 45.0%
GCAAAACGTTGTATGTCTGC+AGG + chr1_2:36692843-36692862 Msa0069080:intron 45.0%
TTTGGTGAATGCGCTTGAAG+AGG + chr1_2:36693130-36693149 Msa0069080:intron 45.0%
AAACTCACAGGGTGATTGCT+CGG - chr1_2:36693352-36693371 None:intergenic 45.0%
CCCCCTGTTAGAAGGATATT+TGG + chr1_2:36693505-36693524 Msa0069080:intron 45.0%
GCAGCTTGAACAGAAGTTTG+AGG + chr1_2:36693638-36693657 Msa0069080:intron 45.0%
AAATAGAAGAGTGGCTGCAG+AGG - chr1_2:36693707-36693726 None:intergenic 45.0%
GAGATTTCGCAAAGCACACA+TGG + chr1_2:36693744-36693763 Msa0069080:intron 45.0%
TTTGGTCCTCCACCCAAATT+TGG + chr1_2:36694434-36694453 Msa0069080:intron 45.0%
CATCAACCAAATTTGGGTGG+AGG - chr1_2:36694443-36694462 None:intergenic 45.0%
CCACATCAACCAAATTTGGG+TGG - chr1_2:36694446-36694465 None:intergenic 45.0%
! CCACCCAAATTTGGTTGATG+TGG + chr1_2:36694443-36694462 Msa0069080:intron 45.0%
!! GGCATTGACCATTAATGACG+TGG + chr1_2:36694464-36694483 Msa0069080:intron 45.0%
! TGGGTATGTTGACAAGTTGG+GGG + chr1_2:36694502-36694521 Msa0069080:intron 45.0%
ATGACATGGCAACCCCTAAA+TGG - chr1_2:36694786-36694805 None:intergenic 45.0%
!! GGCATTGACCACTAATGACA+TGG - chr1_2:36694800-36694819 None:intergenic 45.0%
! AAATTGACTCCACATTGGGG+CGG + chr1_2:36694829-36694848 Msa0069080:intron 45.0%
!! GTAATTTTGGCATGGCTGCA+GGG - chr1_2:36695379-36695398 None:intergenic 45.0%
TGTATCCAGGCTGTGTATGT+AGG - chr1_2:36695511-36695530 None:intergenic 45.0%
CAACGTGAGTTAACTCACGT+GGG + chr1_2:36695801-36695820 Msa0069080:intron 45.0%
!!! AACTAGCGCAGGGGTATTTT+CGG + chr1_2:36695887-36695906 Msa0069080:intron 45.0%
AAAAGTGGCTGTACAAGCAC+TGG - chr1_2:36696092-36696111 None:intergenic 45.0%
AAGAGGAAGGAGAAGGAAGA+GGG - chr1_2:36696150-36696169 None:intergenic 45.0%
GAAAAGGAAGAGGAAGGAGA+AGG - chr1_2:36696173-36696192 None:intergenic 45.0%
GAAGAGGAAAAGGAAGAGGA+AGG - chr1_2:36696179-36696198 None:intergenic 45.0%
GAAGGAAGAGGAAAAGGAAG+AGG - chr1_2:36696183-36696202 None:intergenic 45.0%
GAGATCTGTAGAGAAGGAAG+AGG - chr1_2:36696195-36696214 None:intergenic 45.0%
TCCTTCTCTACAGATCTCAC+CGG + chr1_2:36696197-36696216 Msa0069080:intron 45.0%
! TGGTTGTTTCCGGTTAGATC+CGG - chr1_2:36696219-36696238 None:intergenic 45.0%
!! GACCGGATCTAAGTTTTTGG+TGG - chr1_2:36696239-36696258 None:intergenic 45.0%
! AACGACCGGATCTGAGTTTT+TGG - chr1_2:36696315-36696334 None:intergenic 45.0%
GGATCTGAACACAAAACGAC+CGG - chr1_2:36696329-36696348 None:intergenic 45.0%
!! GGTCGTTTTGTGTTCAGATC+CGG + chr1_2:36696328-36696347 Msa0069080:intron 45.0%
TGTGTTCAGATCCGGAAAAG+CGG + chr1_2:36696336-36696355 Msa0069080:intron 45.0%
TTGGTCTCTGTTGTCAAACG+CGG - chr1_2:36696503-36696522 None:intergenic 45.0%
GCCGCTACTTGATCGAAATT+TGG + chr1_2:36697488-36697507 Msa0069080:three_prime_UTR 45.0%
AATTTGGAAAGCCGTTGGGA+TGG + chr1_2:36697504-36697523 Msa0069080:three_prime_UTR 45.0%
ATGCCAGAGCTGATGAGTAT+TGG + chr1_2:36697575-36697594 Msa0069080:three_prime_UTR 45.0%
!! TGAGTATTGGCCTCTTGTGT+TGG + chr1_2:36697588-36697607 Msa0069080:three_prime_UTR 45.0%
GGTGTAGCCAAATTATGGGA+CGG + chr1_2:36697740-36697759 Msa0069080:intron 45.0%
GTTCACTCCGTCCCATAATT+TGG - chr1_2:36697750-36697769 None:intergenic 45.0%
ATGTCAGCACACTGCATACA+TGG - chr1_2:36697805-36697824 None:intergenic 45.0%
CATTCCCAATTGGCAGATGT+CGG - chr1_2:36698498-36698517 None:intergenic 45.0%
ACATGTCTGAAAATCACCCG+AGG - chr1_2:36698666-36698685 None:intergenic 45.0%
ATATTGCCCGCCAAAGATTG+TGG + chr1_2:36699121-36699140 Msa0069080:three_prime_UTR 45.0%
TTCCTTCCACAATCTTTGGC+GGG - chr1_2:36699130-36699149 None:intergenic 45.0%
GGGTTTCCTTCCACAATCTT+TGG - chr1_2:36699134-36699153 None:intergenic 45.0%
GTGGAGCGTAATGCAGATAA+TGG + chr1_2:36699206-36699225 Msa0069080:three_prime_UTR 45.0%
! GAGCGTAATGCAGATAATGG+TGG + chr1_2:36699209-36699228 Msa0069080:three_prime_UTR 45.0%
GAAGCCAACCAGAATGGTTT+AGG - chr1_2:36699300-36699319 None:intergenic 45.0%
ACATCCAGCTGACCTTAAAC+CGG + chr1_2:36699445-36699464 Msa0069080:three_prime_UTR 45.0%
! ACTTCGACAAAGCCGGTTTA+AGG - chr1_2:36699460-36699479 None:intergenic 45.0%
! GGTTTGTTTGGTTCAAACGG+AGG + chr1_2:36699773-36699792 Msa0069080:intron 45.0%
AGGGTAGAGATTTCCATGGA+AGG + chr1_2:36699793-36699812 Msa0069080:intron 45.0%
GTAGAGATTTCCATGGAAGG+TGG + chr1_2:36699796-36699815 Msa0069080:intron 45.0%
AGAGATTTCCATGGAAGGTG+GGG + chr1_2:36699798-36699817 Msa0069080:intron 45.0%
GGGAATGACATATATGGGCA+TGG + chr1_2:36699953-36699972 Msa0069080:intron 45.0%
ATGACATATATGGGCATGGG+TGG + chr1_2:36699957-36699976 Msa0069080:intron 45.0%
TGACATATATGGGCATGGGT+GGG + chr1_2:36699958-36699977 Msa0069080:intron 45.0%
GTGGGTGCATAATCGGTAAT+AGG - chr1_2:36700026-36700045 None:intergenic 45.0%
GAGGAAAACCAACTCAATCC+TGG - chr1_2:36700055-36700074 None:intergenic 45.0%
GCTTTACTTGGACAAGGTGA+TGG - chr1_2:36700127-36700146 None:intergenic 45.0%
TGGCATGATGGTTGCGTATT+TGG + chr1_2:36700215-36700234 Msa0069080:intron 45.0%
GAAATGACCAAAAACCCCAG+CGG + chr1_2:36700264-36700283 Msa0069080:intron 45.0%
! TTAACTACCGCTGGGGTTTT+TGG - chr1_2:36700274-36700293 None:intergenic 45.0%
!! TTGGGGTTTGTTGAACCCTT+TGG + chr1_2:36700805-36700824 Msa0069080:three_prime_UTR 45.0%
!!! TTTTAATTTTTTATAAGTTT+TGG - chr1_2:36694859-36694878 None:intergenic 5.0%
ATTGAAATTCCGACCGACGC+TGG + chr1_2:36691852-36691871 Msa0069080:CDS 50.0%
CGTGCATAGGTTGTTGAGTG+CGG + chr1_2:36692076-36692095 Msa0069080:intron 50.0%
CCATCGTAACAAACAGGCTG+AGG - chr1_2:36692182-36692201 None:intergenic 50.0%
! CCTCAGCCTGTTTGTTACGA+TGG + chr1_2:36692179-36692198 Msa0069080:CDS 50.0%
GCAATGTGCATTCGTCCAGA+AGG - chr1_2:36692212-36692231 None:intergenic 50.0%
TGGACGAATGCACATTGCTC+AGG + chr1_2:36692214-36692233 Msa0069080:intron 50.0%
TGAGCTCTTGCTCGAACACA+TGG + chr1_2:36693100-36693119 Msa0069080:intron 50.0%
TCTTGCTCGAACACATGGTG+CGG + chr1_2:36693105-36693124 Msa0069080:intron 50.0%
! CGAACACATGGTGCGGTTTT+TGG + chr1_2:36693112-36693131 Msa0069080:intron 50.0%
CTTCTAACAGGGGGATGATG+GGG - chr1_2:36693499-36693518 None:intergenic 50.0%
CCTTCTAACAGGGGGATGAT+GGG - chr1_2:36693500-36693519 None:intergenic 50.0%
TCCTTCTAACAGGGGGATGA+TGG - chr1_2:36693501-36693520 None:intergenic 50.0%
TTGGGTGGAGGACCAAAACT+GGG - chr1_2:36694431-36694450 None:intergenic 50.0%
TTTGGGTGGAGGACCAAAAC+TGG - chr1_2:36694432-36694451 None:intergenic 50.0%
AGGGGTTGCCATGTCATTAG+TGG + chr1_2:36694789-36694808 Msa0069080:intron 50.0%
GCCCCAATGTGGAGTCAATT+TGG - chr1_2:36694830-36694849 None:intergenic 50.0%
! AATTGACTCCACATTGGGGC+GGG + chr1_2:36694830-36694849 Msa0069080:intron 50.0%
!! GGTAATTTTGGCATGGCTGC+AGG - chr1_2:36695380-36695399 None:intergenic 50.0%
!! GCGCAAGGGTAATTTTGGCA+TGG - chr1_2:36695387-36695406 None:intergenic 50.0%
!! GCGTGAGTTAACTTGCGCAA+GGG - chr1_2:36695401-36695420 None:intergenic 50.0%
!! AGCGTGAGTTAACTTGCGCA+AGG - chr1_2:36695402-36695421 None:intergenic 50.0%
GCATACCTACATACACAGCC+TGG + chr1_2:36695503-36695522 Msa0069080:intron 50.0%
GTCTTCTGCAATTTGGCACG+TGG - chr1_2:36695616-36695635 None:intergenic 50.0%
CCACGTGAGTTAACTCACGT+TGG - chr1_2:36695803-36695822 None:intergenic 50.0%
CCAACGTGAGTTAACTCACG+TGG + chr1_2:36695800-36695819 Msa0069080:intron 50.0%
TGCGCTAGTTAACTAGCGCA+GGG + chr1_2:36695877-36695896 Msa0069080:intron 50.0%
!!! ACTAGCGCAGGGGTATTTTC+GGG + chr1_2:36695888-36695907 Msa0069080:intron 50.0%
!! GTATTTTCGGGATGGCTGCA+GGG + chr1_2:36695900-36695919 Msa0069080:intron 50.0%
GAAGAGGAAGGAGAAGGAAG+AGG - chr1_2:36696151-36696170 None:intergenic 50.0%
GAGAAGGAAGAGGAAGGAGA+AGG - chr1_2:36696157-36696176 None:intergenic 50.0%
AGGAAGGAGAAGGAAGAGGA+AGG - chr1_2:36696163-36696182 None:intergenic 50.0%
GAAGAGGAAGGAGAAGGAAG+AGG - chr1_2:36696151-36696170 None:intergenic 50.0%
TCCGGTGAGATCTGTAGAGA+AGG - chr1_2:36696201-36696220 None:intergenic 50.0%
CAGATCTCACCGGATCTAAC+CGG + chr1_2:36696207-36696226 Msa0069080:intron 50.0%
GGATCTGAGCACAAAACGAC+CGG - chr1_2:36696256-36696275 None:intergenic 50.0%
!! GGTCGTTTTGTGCTCAGATC+CGG + chr1_2:36696255-36696274 Msa0069080:intron 50.0%
!! AGATCCGGTCGTTTTGTCAC+CGG + chr1_2:36696270-36696289 Msa0069080:intron 50.0%
AGATCCGGTGACAAAACGAC+CGG - chr1_2:36696277-36696296 None:intergenic 50.0%
GTGTTCAGATCCGGAAAAGC+GGG + chr1_2:36696337-36696356 Msa0069080:intron 50.0%
! TTTGTGGAAAGCGGGTTTCG+CGG - chr1_2:36696407-36696426 None:intergenic 50.0%
! CCTGCAACAGAATTTTGCGC+AGG - chr1_2:36696962-36696981 None:intergenic 50.0%
CCTGCGCAAAATTCTGTTGC+AGG + chr1_2:36696959-36696978 Msa0069080:intron 50.0%
GTGAACAAGCTAACATCCGC+TGG + chr1_2:36697379-36697398 Msa0069080:CDS 50.0%
TCCTTCCAGATCCATCCCAA+CGG - chr1_2:36697518-36697537 None:intergenic 50.0%
AGGCCAATACTCATCAGCTC+TGG - chr1_2:36697581-36697600 None:intergenic 50.0%
ATAGGCCGACATCTGCCAAT+TGG + chr1_2:36698490-36698509 Msa0069080:intron 50.0%
TAGGCCGACATCTGCCAATT+GGG + chr1_2:36698491-36698510 Msa0069080:intron 50.0%
CGACATCTGCCAATTGGGAA+TGG + chr1_2:36698496-36698515 Msa0069080:three_prime_UTR 50.0%
! TCTTGCCCTTGTTGTAGACC+AGG - chr1_2:36698691-36698710 None:intergenic 50.0%
TGTGGAAGGAAACCCATGCT+TGG + chr1_2:36699139-36699158 Msa0069080:three_prime_UTR 50.0%
! AAAGCCGGTTTAAGGTCAGC+TGG - chr1_2:36699452-36699471 None:intergenic 50.0%
TACTATCAGGGGAGAGCTAG+AGG + chr1_2:36699701-36699720 Msa0069080:intron 50.0%
ACGGAGGGTAGAGATTTCCA+TGG + chr1_2:36699789-36699808 Msa0069080:intron 50.0%
ATGGAAGGTGGGGTAAGAGA+GGG + chr1_2:36699808-36699827 Msa0069080:intron 50.0%
! TACCGATTATGCACCCACCT+TGG + chr1_2:36700028-36700047 Msa0069080:intron 50.0%
ACCGATTATGCACCCACCTT+GGG + chr1_2:36700029-36700048 Msa0069080:intron 50.0%
TAGCGGTAGTTAACTACCGC+TGG + chr1_2:36700320-36700339 Msa0069080:intron 50.0%
AGCGGTAGTTAACTACCGCT+GGG + chr1_2:36700321-36700340 Msa0069080:intron 50.0%
CACTATCGCAATGCCAGCGT+CGG - chr1_2:36691868-36691887 None:intergenic 55.0%
! TGATTCCAGTGCTACTGCGG+CGG - chr1_2:36691931-36691950 None:intergenic 55.0%
!! GCTGAGGCTTTTTAGCGAGG+AGG - chr1_2:36692166-36692185 None:intergenic 55.0%
!! CAGGCTGAGGCTTTTTAGCG+AGG - chr1_2:36692169-36692188 None:intergenic 55.0%
CCCATCATCCCCCTGTTAGA+AGG + chr1_2:36693497-36693516 Msa0069080:intron 55.0%
CTGCAGAGGACGCTAGTGTT+TGG - chr1_2:36693693-36693712 None:intergenic 55.0%
! ATTGACTCCACATTGGGGCG+GGG + chr1_2:36694831-36694850 Msa0069080:intron 55.0%
GTCAAAGTGGAAACGCGGTG+CGG + chr1_2:36694959-36694978 Msa0069080:intron 55.0%
TGCGAGCAAAATGTGCTGGG+TGG - chr1_2:36695356-36695375 None:intergenic 55.0%
GGGTGCGAGCAAAATGTGCT+GGG - chr1_2:36695359-36695378 None:intergenic 55.0%
AGGGTGCGAGCAAAATGTGC+TGG - chr1_2:36695360-36695379 None:intergenic 55.0%
CTGCGCTAGTTAACTAGCGC+AGG + chr1_2:36695876-36695895 Msa0069080:intron 55.0%
GCGCTAGTTAACTAGCGCAG+GGG + chr1_2:36695878-36695897 Msa0069080:intron 55.0%
!! GGTATTTTCGGGATGGCTGC+AGG + chr1_2:36695899-36695918 Msa0069080:intron 55.0%
!! AGTGGCTGTACAAGCACTGG+CGG - chr1_2:36696089-36696108 None:intergenic 55.0%
GGGAAGGAGGAAGAAGGAAG+CGG - chr1_2:36696130-36696149 None:intergenic 55.0%
GGAAGAGGGAAGGAGGAAGA+AGG - chr1_2:36696136-36696155 None:intergenic 55.0%
AGGAGAAGGAAGAGGGAAGG+AGG - chr1_2:36696143-36696162 None:intergenic 55.0%
GGAAGGAGAAGGAAGAGGGA+AGG - chr1_2:36696146-36696165 None:intergenic 55.0%
!! AAGCGGAGCGGGTTAATAGC+GGG - chr1_2:36696371-36696390 None:intergenic 55.0%
!! GAAGCGGAGCGGGTTAATAG+CGG - chr1_2:36696372-36696391 None:intergenic 55.0%
GTCACGCGTTTGTGGAAAGC+GGG - chr1_2:36696415-36696434 None:intergenic 55.0%
CGTCACGCGTTTGTGGAAAG+CGG - chr1_2:36696416-36696435 None:intergenic 55.0%
CTTTCCACAAACGCGTGACG+CGG + chr1_2:36696416-36696435 Msa0069080:intron 55.0%
!!! GTGACGCGGCTCCTTGTTTT+TGG + chr1_2:36696446-36696465 Msa0069080:intron 55.0%
GAAAGCCGTTGGGATGGATC+TGG + chr1_2:36697510-36697529 Msa0069080:three_prime_UTR 55.0%
GTTGGGATGGATCTGGAAGG+AGG + chr1_2:36697517-36697536 Msa0069080:three_prime_UTR 55.0%
TGCCCGCCAAAGATTGTGGA+AGG + chr1_2:36699125-36699144 Msa0069080:three_prime_UTR 55.0%
CAGACCGAAGCCAACCAGAA+TGG - chr1_2:36699306-36699325 None:intergenic 55.0%
CTCTCTTACCCCACCTTCCA+TGG - chr1_2:36699809-36699828 None:intergenic 55.0%
CATGGAAGGTGGGGTAAGAG+AGG + chr1_2:36699807-36699826 Msa0069080:intron 55.0%
TGGAAGGTGGGGTAAGAGAG+GGG + chr1_2:36699809-36699828 Msa0069080:intron 55.0%
GCCCAAGGTGGGTGCATAAT+CGG - chr1_2:36700033-36700052 None:intergenic 55.0%
ACTCAATCCTGGCCCAAGGT+GGG - chr1_2:36700044-36700063 None:intergenic 55.0%
AACTCAATCCTGGCCCAAGG+TGG - chr1_2:36700045-36700064 None:intergenic 55.0%
ACCTTGGGCCAGGATTGAGT+TGG + chr1_2:36700044-36700063 Msa0069080:intron 55.0%
ACCAACTCAATCCTGGCCCA+AGG - chr1_2:36700048-36700067 None:intergenic 55.0%
GCGGTAGTTAACTACCGCTG+GGG - chr1_2:36700322-36700341 None:intergenic 55.0%
GGCGGTAGTTAACTACCGCT+GGG - chr1_2:36700282-36700301 None:intergenic 55.0%
TGGCGGTAGTTAACTACCGC+TGG - chr1_2:36700283-36700302 None:intergenic 55.0%
GCGGTAGTTAACTACCGCTG+GGG + chr1_2:36700322-36700341 Msa0069080:intron 55.0%
CGGTAGTTAACTACCGCTGG+GGG + chr1_2:36700323-36700342 Msa0069080:intron 55.0%
!! ATCGCAATGCCAGCGTCGGT+CGG - chr1_2:36691864-36691883 None:intergenic 60.0%
TTGACTCCACATTGGGGCGG+GGG + chr1_2:36694832-36694851 Msa0069080:intron 60.0%
GCGGGGGCTATTACATGACG+CGG + chr1_2:36695001-36695020 Msa0069080:intron 60.0%
!!! GCGCAGGGGTATTTTCGGGA+TGG + chr1_2:36695892-36695911 Msa0069080:intron 60.0%
! AGGGTGCGAGCGAAAAGTGC+AGG + chr1_2:36695919-36695938 Msa0069080:intron 60.0%
! GGGTGCGAGCGAAAAGTGCA+GGG + chr1_2:36695920-36695939 Msa0069080:intron 60.0%
! TGCGAGCGAAAAGTGCAGGG+CGG + chr1_2:36695923-36695942 Msa0069080:intron 60.0%
!! GGTCAAAGCGCCCGCTTTTC+CGG - chr1_2:36696350-36696369 None:intergenic 60.0%
GCCGTTGGGATGGATCTGGA+AGG + chr1_2:36697514-36697533 Msa0069080:three_prime_UTR 60.0%
AAGGTGGGGTAAGAGAGGGG+AGG + chr1_2:36699812-36699831 Msa0069080:intron 60.0%
ATATGGGCATGGGTGGGAGC+TGG + chr1_2:36699964-36699983 Msa0069080:intron 60.0%
TTATGCACCCACCTTGGGCC+AGG + chr1_2:36700034-36700053 Msa0069080:intron 60.0%
AGTAGCCGCCGCAGTAGCAC+TGG + chr1_2:36691923-36691942 Msa0069080:CDS 65.0%
TTTGGTCCCCCGCCCCAATG+TGG - chr1_2:36694841-36694860 None:intergenic 65.0%
GCGAAATCGCGAAGCGGAGC+GGG - chr1_2:36696382-36696401 None:intergenic 65.0%
CGCGAAATCGCGAAGCGGAG+CGG - chr1_2:36696383-36696402 None:intergenic 65.0%
CGCTCCGCTTCGCGATTTCG+CGG + chr1_2:36696381-36696400 Msa0069080:intron 65.0%
TCCACAAACGCGTGACGCGG+TGG + chr1_2:36696419-36696438 Msa0069080:intron 65.0%
GCGCGGAGCGGCCAAAAACA+AGG - chr1_2:36696460-36696479 None:intergenic 65.0%
TTGTCAAACGCGGCCGCTCC+CGG - chr1_2:36696493-36696512 None:intergenic 65.0%
AGTGGAAACGCGGTGCGGCG+CGG + chr1_2:36694964-36694983 Msa0069080:intron 70.0%
GCGGCCGCGAAATCGCGAAG+CGG - chr1_2:36696388-36696407 None:intergenic 70.0%
GCCACCGCGTCACGCGTTTG+TGG - chr1_2:36696423-36696442 None:intergenic 70.0%
GACGCGGTGGCGTTGTGACG+CGG + chr1_2:36696432-36696451 Msa0069080:intron 70.0%
ACGCGGTGCGGCGCGGTATG+CGG + chr1_2:36694971-36694990 Msa0069080:intron 75.0%
GGCACTATCGCGGCGCGGAG+CGG - chr1_2:36696472-36696491 None:intergenic 75.0%
GCTCCGCGCCGCGATAGTGC+CGG + chr1_2:36696471-36696490 Msa0069080:intron 75.0%
CTCCGCGCCGCGATAGTGCC+GGG + chr1_2:36696472-36696491 Msa0069080:intron 75.0%
CTCCCGGCACTATCGCGGCG+CGG - chr1_2:36696477-36696496 None:intergenic 75.0%
! CGCCGCGATAGTGCCGGGAG+CGG + chr1_2:36696477-36696496 Msa0069080:intron 75.0%
GGCCGCTCCCGGCACTATCG+CGG - chr1_2:36696482-36696501 None:intergenic 75.0%
! CGCGGTGCGGCGCGGTATGC+GGG + chr1_2:36694972-36694991 Msa0069080:intron 80.0%
! CGCGGTATGCGGGCGCGACG+CGG + chr1_2:36694982-36695001 Msa0069080:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG + chr1_2:36694983-36695002 Msa0069080:intron 80.0%
! CGGTATGCGGGCGCGACGCG+GGG + chr1_2:36694984-36695003 Msa0069080:intron 80.0%
! GGTATGCGGGCGCGACGCGG+GGG + chr1_2:36694985-36695004 Msa0069080:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 36691849 36700939 36691849 ID=Msa0069080;Name=Msa0069080
chr1_2 mRNA 36691849 36700939 36691849 ID=Msa0069080-mRNA-1;Parent=Msa0069080;Name=Msa0069080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.88|0.8|1|0.88|0.9|10|1130|113
chr1_2 exon 36691849 36692003 36691849 ID=Msa0069080-mRNA-1:exon:11673;Parent=Msa0069080-mRNA-1
chr1_2 exon 36692085 36692200 36692085 ID=Msa0069080-mRNA-1:exon:11674;Parent=Msa0069080-mRNA-1
chr1_2 exon 36697358 36697647 36697358 ID=Msa0069080-mRNA-1:exon:11675;Parent=Msa0069080-mRNA-1
chr1_2 exon 36697741 36697837 36697741 ID=Msa0069080-mRNA-1:exon:11676;Parent=Msa0069080-mRNA-1
chr1_2 exon 36698494 36698599 36698494 ID=Msa0069080-mRNA-1:exon:11677;Parent=Msa0069080-mRNA-1
chr1_2 exon 36698680 36698762 36698680 ID=Msa0069080-mRNA-1:exon:11678;Parent=Msa0069080-mRNA-1
chr1_2 exon 36699092 36699237 36699092 ID=Msa0069080-mRNA-1:exon:11679;Parent=Msa0069080-mRNA-1
chr1_2 exon 36699394 36699499 36699394 ID=Msa0069080-mRNA-1:exon:11680;Parent=Msa0069080-mRNA-1
chr1_2 exon 36700461 36700520 36700461 ID=Msa0069080-mRNA-1:exon:11681;Parent=Msa0069080-mRNA-1
chr1_2 exon 36700627 36700939 36700627 ID=Msa0069080-mRNA-1:exon:11682;Parent=Msa0069080-mRNA-1
chr1_2 CDS 36691849 36692003 36691849 ID=Msa0069080-mRNA-1:cds;Parent=Msa0069080-mRNA-1
chr1_2 CDS 36692085 36692200 36692085 ID=Msa0069080-mRNA-1:cds;Parent=Msa0069080-mRNA-1
chr1_2 CDS 36697358 36697428 36697358 ID=Msa0069080-mRNA-1:cds;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36697429 36697647 36697429 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36697741 36697837 36697741 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36698494 36698599 36698494 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36698680 36698762 36698680 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36699092 36699237 36699092 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36699394 36699499 36699394 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36700461 36700520 36700461 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
chr1_2 three_prime_UTR 36700627 36700939 36700627 ID=Msa0069080-mRNA-1:three_prime_utr;Parent=Msa0069080-mRNA-1
Gene Sequence

>Msa0069080

AAGATTGAAATTCCGACCGACGCTGGCATTGCGATAGTGTTGAAAGTCAAAACCCTAAAAATGGCAGAAGAAGCAGTAGCCGCCGCAGTAGCACTGGAATCATTGTCCGTCGCTGAATCATCATCAACCAATTCAAATCCAAATCCAACACCGCAGTTGTTGAGTGCGGAACAGAGATTTGAGATCGTGAGAAGCATCGGAGAAGAGTGCATTCAAGAAGATGAACTTCTTAACCTCCTCGCTAAAAAGCCTCAGCCTGTTTGTTACGATGGGTGTCATGAAAACAATCAATGTGAACAAGCTAACATCCGCTGGTTGCCTAGTCAAAATATGGATTGCTGA
Protein sequence

>Msa0069080

KIEIPTDAGIAIVLKVKTLKMAEEAVAAAVALESLSVAESSSTNSNPNPTPQLLSAEQRFEIVRSIGEECIQEDELLNLLAKKPQPVCYDGCHENNQCEQANIRWLPSQNMDC*