Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418770 | sp|P46293|RS16_GOSHI | 94.286 | 140 | 8 | 0 | 1 | 140 | 6 | 145 | 2.76e-93 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418770 | G7LBJ0 | 100.000 | 140 | 0 | 0 | 1 | 140 | 1 | 140 | 4.80e-97 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1418770 | 0.829868 | 4.046751e-55 | -8.615850e-47 |
| Msa0032780 | Msa1418770 | 0.868136 | 8.168985e-66 | -8.615850e-47 |
| Msa0042480 | Msa1418770 | 0.803998 | 2.667022e-49 | -8.615850e-47 |
| Msa0065110 | Msa1418770 | 0.813575 | 2.387817e-51 | -8.615850e-47 |
| Msa0069080 | Msa1418770 | 0.801761 | 7.728570e-49 | -8.615850e-47 |
| Msa0075350 | Msa1418770 | 0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0077320 | Msa1418770 | 0.802138 | 6.467274e-49 | -8.615850e-47 |
| Msa0085780 | Msa1418770 | 0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0090580 | Msa1418770 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0100420 | Msa1418770 | 0.800445 | 1.436250e-48 | -8.615850e-47 |
| Msa0114570 | Msa1418770 | 0.844705 | 6.406236e-59 | -8.615850e-47 |
| Msa0116670 | Msa1418770 | 0.827743 | 1.321865e-54 | -8.615850e-47 |
| Msa1356790 | Msa1418770 | 0.816918 | 4.316892e-52 | -8.615850e-47 |
| Msa1362210 | Msa1418770 | 0.822413 | 2.400957e-53 | -8.615850e-47 |
| Msa1362790 | Msa1418770 | 0.850113 | 2.094145e-60 | -8.615850e-47 |
| Msa1364480 | Msa1418770 | 0.823355 | 1.448474e-53 | -8.615850e-47 |
| Msa1368920 | Msa1418770 | 0.863670 | 2.109075e-64 | -8.615850e-47 |
| Msa1369190 | Msa1418770 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
| Msa1374240 | Msa1418770 | 0.861952 | 7.143667e-64 | -8.615850e-47 |
| Msa1392590 | Msa1418770 | 0.819040 | 1.430949e-52 | -8.615850e-47 |
| Msa1397100 | Msa1418770 | 0.866401 | 2.930256e-65 | -8.615850e-47 |
| Msa1403910 | Msa1418770 | 0.858836 | 6.264982e-63 | -8.615850e-47 |
| Msa1410440 | Msa1418770 | 0.810432 | 1.156338e-50 | -8.615850e-47 |
| Msa1418770 | Msa1426120 | 0.869448 | 3.072091e-66 | -8.615850e-47 |
| Msa1418770 | Msa1426490 | 0.811762 | 5.954049e-51 | -8.615850e-47 |
| Msa1418770 | Msa1446410 | 0.829288 | 5.597399e-55 | -8.615850e-47 |
| Msa0622230 | Msa1418770 | 0.837752 | 4.318780e-57 | -8.615850e-47 |
| Msa0653060 | Msa1418770 | 0.814411 | 1.561577e-51 | -8.615850e-47 |
| Msa0656410 | Msa1418770 | 0.810366 | 1.194445e-50 | -8.615850e-47 |
| Msa0705800 | Msa1418770 | 0.888629 | 4.984482e-73 | -8.615850e-47 |
| Msa0712610 | Msa1418770 | 0.829463 | 5.075421e-55 | -8.615850e-47 |
| Msa0717380 | Msa1418770 | 0.841506 | 4.559320e-58 | -8.615850e-47 |
| Msa0729200 | Msa1418770 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0752910 | Msa1418770 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
| Msa0766080 | Msa1418770 | 0.833594 | 4.875039e-56 | -8.615850e-47 |
| Msa0769590 | Msa1418770 | 0.800250 | 1.573902e-48 | -8.615850e-47 |
| Msa0781080 | Msa1418770 | 0.845584 | 3.706891e-59 | -8.615850e-47 |
| Msa0788380 | Msa1418770 | 0.840341 | 9.217146e-58 | -8.615850e-47 |
| Msa0792420 | Msa1418770 | 0.822810 | 1.941411e-53 | -8.615850e-47 |
| Msa0799830 | Msa1418770 | 0.832147 | 1.115743e-55 | -8.615850e-47 |
| Msa0802480 | Msa1418770 | 0.818503 | 1.894327e-52 | -8.615850e-47 |
| Msa0822580 | Msa1418770 | 0.857560 | 1.501534e-62 | -8.615850e-47 |
| Msa0827380 | Msa1418770 | 0.805530 | 1.277018e-49 | -8.615850e-47 |
| Msa0838070 | Msa1418770 | 0.815025 | 1.142080e-51 | -8.615850e-47 |
| Msa0138890 | Msa1418770 | 0.831905 | 1.280316e-55 | -8.615850e-47 |
| Msa0140850 | Msa1418770 | 0.807256 | 5.523560e-50 | -8.615850e-47 |
| Msa0172900 | Msa1418770 | 0.829041 | 6.424691e-55 | -8.615850e-47 |
| Msa0172930 | Msa1418770 | 0.841101 | 5.829015e-58 | -8.615850e-47 |
| Msa0173530 | Msa1418770 | 0.827699 | 1.354497e-54 | -8.615850e-47 |
| Msa0186740 | Msa1418770 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0191450 | Msa1418770 | 0.851950 | 6.356299e-61 | -8.615850e-47 |
| Msa0191550 | Msa1418770 | 0.840782 | 7.066707e-58 | -8.615850e-47 |
| Msa0194940 | Msa1418770 | 0.843346 | 1.482505e-58 | -8.615850e-47 |
| Msa0210330 | Msa1418770 | 0.811291 | 7.533176e-51 | -8.615850e-47 |
| Msa0210360 | Msa1418770 | 0.852408 | 4.708006e-61 | -8.615850e-47 |
| Msa0218720 | Msa1418770 | 0.806525 | 7.886480e-50 | -8.615850e-47 |
| Msa0218830 | Msa1418770 | 0.820331 | 7.258119e-53 | -8.615850e-47 |
| Msa0222730 | Msa1418770 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0229150 | Msa1418770 | 0.824331 | 8.553313e-54 | -8.615850e-47 |
| Msa0230490 | Msa1418770 | 0.839094 | 1.945655e-57 | -8.615850e-47 |
| Msa1240270 | Msa1418770 | 0.800060 | 1.720509e-48 | -8.615850e-47 |
| Msa1256840 | Msa1418770 | 0.853594 | 2.154746e-61 | -8.615850e-47 |
| Msa1266060 | Msa1418770 | 0.819244 | 1.285844e-52 | -8.615850e-47 |
| Msa1273340 | Msa1418770 | 0.821210 | 4.557371e-53 | -8.615850e-47 |
| Msa1299590 | Msa1418770 | 0.822084 | 2.861936e-53 | -8.615850e-47 |
| Msa1301640 | Msa1418770 | 0.802995 | 4.305954e-49 | -8.615850e-47 |
| Msa1311400 | Msa1418770 | 0.906954 | 8.537767e-81 | -8.615850e-47 |
| Msa1321790 | Msa1418770 | 0.811445 | 6.974913e-51 | -8.615850e-47 |
| Msa1332250 | Msa1418770 | 0.911427 | 6.154117e-83 | -8.615850e-47 |
| Msa1338190 | Msa1418770 | 0.862858 | 3.762967e-64 | -8.615850e-47 |
| Msa1343260 | Msa1418770 | 0.820938 | 5.264738e-53 | -8.615850e-47 |
| Msa0376830 | Msa1418770 | 0.839133 | 1.900850e-57 | -8.615850e-47 |
| Msa0425640 | Msa1418770 | 0.811580 | 6.520141e-51 | -8.615850e-47 |
| Msa0426090 | Msa1418770 | 0.800862 | 1.180870e-48 | -8.615850e-47 |
| Msa0471880 | Msa1418770 | 0.865834 | 4.429717e-65 | -8.615850e-47 |
| Msa0481520 | Msa1418770 | 0.838224 | 3.265141e-57 | -8.615850e-47 |
| Msa0481850 | Msa1418770 | 0.816966 | 4.211388e-52 | -8.615850e-47 |
| Msa1021120 | Msa1418770 | 0.842938 | 1.904312e-58 | -8.615850e-47 |
| Msa1037290 | Msa1418770 | 0.864003 | 1.662300e-64 | -8.615850e-47 |
| Msa1039520 | Msa1418770 | 0.836588 | 8.569983e-57 | -8.615850e-47 |
| Msa1040160 | Msa1418770 | 0.826589 | 2.496770e-54 | -8.615850e-47 |
| Msa1041680 | Msa1418770 | 0.812614 | 3.879659e-51 | -8.615850e-47 |
| Msa1078870 | Msa1418770 | 0.863966 | 1.706393e-64 | -8.615850e-47 |
| Msa1078980 | Msa1418770 | 0.845305 | 4.413033e-59 | -8.615850e-47 |
| Msa1080350 | Msa1418770 | 0.832044 | 1.183302e-55 | -8.615850e-47 |
| Msa1082170 | Msa1418770 | 0.833065 | 6.604188e-56 | -8.615850e-47 |
| Msa1083370 | Msa1418770 | 0.808958 | 2.397894e-50 | -8.615850e-47 |
| Msa1089220 | Msa1418770 | 0.840421 | 8.787273e-58 | -8.615850e-47 |
| Msa1094380 | Msa1418770 | 0.838325 | 3.075672e-57 | -8.615850e-47 |
| Msa1096900 | Msa1418770 | 0.820337 | 7.234029e-53 | -8.615850e-47 |
| Msa0257450 | Msa1418770 | 0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa0265250 | Msa1418770 | 0.830376 | 3.040449e-55 | -8.615850e-47 |
| Msa0281370 | Msa1418770 | 0.807940 | 3.953398e-50 | -8.615850e-47 |
| Msa0297830 | Msa1418770 | 0.867258 | 1.562199e-65 | -8.615850e-47 |
| Msa0301220 | Msa1418770 | 0.811086 | 8.344836e-51 | -8.615850e-47 |
| Msa0333910 | Msa1418770 | 0.811456 | 6.939854e-51 | -8.615850e-47 |
| Msa0335840 | Msa1418770 | 0.874121 | 8.648448e-68 | -8.615850e-47 |
| Msa0337670 | Msa1418770 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
| Msa0348830 | Msa1418770 | 0.818890 | 1.547738e-52 | -8.615850e-47 |
| Msa1125860 | Msa1418770 | 0.822034 | 2.939922e-53 | -8.615850e-47 |
| Msa1126060 | Msa1418770 | 0.823113 | 1.649569e-53 | -8.615850e-47 |
| Msa1126520 | Msa1418770 | 0.842753 | 2.132910e-58 | -8.615850e-47 |
| Msa1164150 | Msa1418770 | 0.856193 | 3.796839e-62 | -8.615850e-47 |
| Msa1165640 | Msa1418770 | 0.838893 | 2.194044e-57 | -8.615850e-47 |
| Msa1166570 | Msa1418770 | 0.808893 | 2.476530e-50 | -8.615850e-47 |
| Msa1167540 | Msa1418770 | 0.811069 | 8.418586e-51 | -8.615850e-47 |
| Msa1169180 | Msa1418770 | 0.835434 | 1.681597e-56 | -8.615850e-47 |
| Msa1186030 | Msa1418770 | 0.809963 | 1.459128e-50 | -8.615850e-47 |
| Msa1203560 | Msa1418770 | 0.804995 | 1.652536e-49 | -8.615850e-47 |
| Msa1218170 | Msa1418770 | 0.856340 | 3.437305e-62 | -8.615850e-47 |
| Msa0517480 | Msa1418770 | 0.821995 | 3.001802e-53 | -8.615850e-47 |
| Msa0529900 | Msa1418770 | 0.846490 | 2.102386e-59 | -8.615850e-47 |
| Msa0540480 | Msa1418770 | 0.827002 | 1.989370e-54 | -8.615850e-47 |
| Msa0573550 | Msa1418770 | 0.803974 | 2.697749e-49 | -8.615850e-47 |
| Msa0584030 | Msa1418770 | 0.912922 | 1.116522e-83 | -8.615850e-47 |
| Msa0591030 | Msa1418770 | 0.830558 | 2.745235e-55 | -8.615850e-47 |
| Msa0591050 | Msa1418770 | 0.863786 | 1.941314e-64 | -8.615850e-47 |
| Msa0861320 | Msa1418770 | 0.850533 | 1.597189e-60 | -8.615850e-47 |
| Msa0867060 | Msa1418770 | 0.817598 | 3.035072e-52 | -8.615850e-47 |
| Msa0876170 | Msa1418770 | 0.864943 | 8.446851e-65 | -8.615850e-47 |
| Msa0888810 | Msa1418770 | 0.855218 | 7.311825e-62 | -8.615850e-47 |
| Msa0915540 | Msa1418770 | 0.890301 | 1.114695e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418770 | MtrunA17_Chr8g0392251 | 100.000 | 140 | 0 | 0 | 1 | 140 | 1 | 140 | 9.25e-101 | 285 |
| Msa1418770 | MtrunA17_Chr8g0392191 | 100.000 | 140 | 0 | 0 | 1 | 140 | 1 | 140 | 9.25e-101 | 285 |
| Msa1418770 | MtrunA17_Chr5g0432551 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 2.08e-100 | 283 |
| Msa1418770 | MtrunA17_Chr4g0044571 | 95.000 | 140 | 7 | 0 | 1 | 140 | 4 | 143 | 2.30e-96 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418770 | AT2G09990.1 | 89.928 | 139 | 14 | 0 | 2 | 140 | 8 | 146 | 5.38e-92 | 263 |
| Msa1418770 | AT5G18380.1 | 89.209 | 139 | 15 | 0 | 2 | 140 | 8 | 146 | 9.21e-92 | 262 |
| Msa1418770 | AT3G04230.1 | 84.173 | 139 | 22 | 0 | 2 | 140 | 8 | 146 | 1.92e-85 | 246 |
| Msa1418770 | AT5G18380.2 | 87.200 | 125 | 16 | 0 | 2 | 126 | 8 | 132 | 3.84e-79 | 230 |
| Msa1418770 | AT5G18380.3 | 87.037 | 108 | 14 | 0 | 2 | 109 | 8 | 115 | 1.18e-67 | 201 |
Find 41 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCTAACGATAAGATTTC+TGG | 0.210396 | tig0024639:+74645 | None:intergenic |
| ACAGAGTAAGAAGGAGATTA+AGG | 0.258952 | tig0024639:-74762 | Msa1418770:CDS |
| CGCTGTGAGCCTAAGAAGTT+TGG | 0.359075 | tig0024639:-74692 | Msa1418770:CDS |
| CTGCAACAGCGTTCTTCTTC+CGG | 0.375769 | tig0024639:+75026 | None:intergenic |
| TCAGAGTATTGCCAAGGCTT+TGG | 0.384487 | tig0024639:-74813 | Msa1418770:CDS |
| GCCTGAGATTCTTCGTTTCA+AGG | 0.392228 | tig0024639:-74939 | Msa1418770:CDS |
| CCACGACCACCAAACTTCTT+AGG | 0.436009 | tig0024639:+74683 | None:intergenic |
| TACGAGCCAATCCTCCTTCT+CGG | 0.440837 | tig0024639:-74914 | Msa1418770:CDS |
| TCTGACGAATGGCATAGATC+TGG | 0.445614 | tig0024639:+74831 | None:intergenic |
| ATGGAACAGGTGCAATGCTT+TGG | 0.453443 | tig0024639:-75049 | Msa1418770:CDS |
| GCCTTGAAACGAAGAATCTC+AGG | 0.478888 | tig0024639:+74938 | None:intergenic |
| GAAGCTCAGCAAGATGGAAC+AGG | 0.488449 | tig0024639:-75062 | None:intergenic |
| CGCGGTCTCATCAAGATCAA+TGG | 0.494184 | tig0024639:-74983 | Msa1418770:CDS |
| TCATATCAACTCCGGCGAAA+CGG | 0.494924 | tig0024639:+74885 | None:intergenic |
| TCAGGCTCCACGAGTTCGAT+TGG | 0.496656 | tig0024639:+74956 | None:intergenic |
| GTGGTCGTGGTGCTCGTGCT+AGG | 0.502073 | tig0024639:-74670 | Msa1418770:CDS |
| CTCGGAAGACACCGTTTCGC+CGG | 0.504037 | tig0024639:-74896 | Msa1418770:CDS |
| GTTTCGCCGGAGTTGATATG+AGG | 0.511168 | tig0024639:-74883 | Msa1418770:CDS |
| CCTAAGAAGTTTGGTGGTCG+TGG | 0.511400 | tig0024639:-74683 | Msa1418770:CDS |
| AGGATCCGTGTGAAGGGTGG+AGG | 0.521481 | tig0024639:-74863 | Msa1418770:CDS |
| CTGACGAATGGCATAGATCT+GGG | 0.534090 | tig0024639:+74832 | None:intergenic |
| TGTTGATGAACAGAGTAAGA+AGG | 0.534508 | tig0024639:-74771 | Msa1418770:CDS |
| ATAATAAGCAACCAAAGCCT+TGG | 0.545151 | tig0024639:+74802 | None:intergenic |
| AACAGGTGCAATGCTTTGGC+CGG | 0.546867 | tig0024639:-75045 | Msa1418770:CDS |
| AACGGTGTCTTCCGAGAAGG+AGG | 0.549270 | tig0024639:+74903 | None:intergenic |
| TGTGAGCCTAAGAAGTTTGG+TGG | 0.558448 | tig0024639:-74689 | Msa1418770:CDS |
| ACCCACTGCAAGAGAGGTCG+CGG | 0.562945 | tig0024639:-75001 | Msa1418770:CDS |
| GCAGTTACCCACTGCAAGAG+AGG | 0.580125 | tig0024639:-75007 | Msa1418770:CDS |
| TGTCTTCCGAGAAGGAGGAT+TGG | 0.582501 | tig0024639:+74908 | None:intergenic |
| TGGCTGTCCAATCGAACTCG+TGG | 0.587642 | tig0024639:-74963 | Msa1418770:CDS |
| TTCTTAGGCTCACAGCGTCT+AGG | 0.590494 | tig0024639:+74698 | None:intergenic |
| CTTGGCAATACTCTGACGAA+TGG | 0.607688 | tig0024639:+74820 | None:intergenic |
| ACCGCGACCTCTCTTGCAGT+GGG | 0.618077 | tig0024639:+75000 | None:intergenic |
| CATTCGTCAGAGTATTGCCA+AGG | 0.620290 | tig0024639:-74819 | Msa1418770:CDS |
| CGAAACGGTGTCTTCCGAGA+AGG | 0.622095 | tig0024639:+74900 | None:intergenic |
| GACCGCGACCTCTCTTGCAG+TGG | 0.624398 | tig0024639:+74999 | None:intergenic |
| TGATATGAGGATCCGTGTGA+AGG | 0.626071 | tig0024639:-74870 | Msa1418770:CDS |
| ATGAGGATCCGTGTGAAGGG+TGG | 0.634725 | tig0024639:-74866 | Msa1418770:CDS |
| TGTGACCTCCACCCTTCACA+CGG | 0.645312 | tig0024639:+74858 | None:intergenic |
| ACGGATCCTCATATCAACTC+CGG | 0.648153 | tig0024639:+74877 | None:intergenic |
| GATATGAGGATCCGTGTGAA+GGG | 0.662094 | tig0024639:-74869 | Msa1418770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATAATAAGCAACCAAAGCCT+TGG | + | tig0024639:74899-74918 | None:intergenic | 35.0% | |
| ! | TGTTGATGAACAGAGTAAGA+AGG | - | tig0024639:74927-74946 | Msa1418770:CDS | 35.0% |
| ACAGAGTAAGAAGGAGATTA+AGG | - | tig0024639:74936-74955 | Msa1418770:CDS | 35.0% | |
| ATGGAACAGGTGCAATGCTT+TGG | - | tig0024639:74649-74668 | Msa1418770:CDS | 45.0% | |
| GCCTGAGATTCTTCGTTTCA+AGG | - | tig0024639:74759-74778 | Msa1418770:CDS | 45.0% | |
| GCCTTGAAACGAAGAATCTC+AGG | + | tig0024639:74763-74782 | None:intergenic | 45.0% | |
| TCATATCAACTCCGGCGAAA+CGG | + | tig0024639:74816-74835 | None:intergenic | 45.0% | |
| ACGGATCCTCATATCAACTC+CGG | + | tig0024639:74824-74843 | None:intergenic | 45.0% | |
| TGATATGAGGATCCGTGTGA+AGG | - | tig0024639:74828-74847 | Msa1418770:CDS | 45.0% | |
| GATATGAGGATCCGTGTGAA+GGG | - | tig0024639:74829-74848 | Msa1418770:CDS | 45.0% | |
| CTGACGAATGGCATAGATCT+GGG | + | tig0024639:74869-74888 | None:intergenic | 45.0% | |
| TCTGACGAATGGCATAGATC+TGG | + | tig0024639:74870-74889 | None:intergenic | 45.0% | |
| CTTGGCAATACTCTGACGAA+TGG | + | tig0024639:74881-74900 | None:intergenic | 45.0% | |
| !! | CATTCGTCAGAGTATTGCCA+AGG | - | tig0024639:74879-74898 | Msa1418770:CDS | 45.0% |
| !! | TCAGAGTATTGCCAAGGCTT+TGG | - | tig0024639:74885-74904 | Msa1418770:CDS | 45.0% |
| TGTGAGCCTAAGAAGTTTGG+TGG | - | tig0024639:75009-75028 | Msa1418770:CDS | 45.0% | |
| AACAGGTGCAATGCTTTGGC+CGG | - | tig0024639:74653-74672 | Msa1418770:CDS | 50.0% | |
| CTGCAACAGCGTTCTTCTTC+CGG | + | tig0024639:74675-74694 | None:intergenic | 50.0% | |
| CGCGGTCTCATCAAGATCAA+TGG | - | tig0024639:74715-74734 | Msa1418770:CDS | 50.0% | |
| TACGAGCCAATCCTCCTTCT+CGG | - | tig0024639:74784-74803 | Msa1418770:CDS | 50.0% | |
| TGTCTTCCGAGAAGGAGGAT+TGG | + | tig0024639:74793-74812 | None:intergenic | 50.0% | |
| !! | GTTTCGCCGGAGTTGATATG+AGG | - | tig0024639:74815-74834 | Msa1418770:CDS | 50.0% |
| TTCTTAGGCTCACAGCGTCT+AGG | + | tig0024639:75003-75022 | None:intergenic | 50.0% | |
| CGCTGTGAGCCTAAGAAGTT+TGG | - | tig0024639:75006-75025 | Msa1418770:CDS | 50.0% | |
| CCACGACCACCAAACTTCTT+AGG | + | tig0024639:75018-75037 | None:intergenic | 50.0% | |
| ! | CCTAAGAAGTTTGGTGGTCG+TGG | - | tig0024639:75015-75034 | Msa1418770:CDS | 50.0% |
| GCAGTTACCCACTGCAAGAG+AGG | - | tig0024639:74691-74710 | Msa1418770:CDS | 55.0% | |
| TGGCTGTCCAATCGAACTCG+TGG | - | tig0024639:74735-74754 | Msa1418770:CDS | 55.0% | |
| TCAGGCTCCACGAGTTCGAT+TGG | + | tig0024639:74745-74764 | None:intergenic | 55.0% | |
| AACGGTGTCTTCCGAGAAGG+AGG | + | tig0024639:74798-74817 | None:intergenic | 55.0% | |
| CGAAACGGTGTCTTCCGAGA+AGG | + | tig0024639:74801-74820 | None:intergenic | 55.0% | |
| ATGAGGATCCGTGTGAAGGG+TGG | - | tig0024639:74832-74851 | Msa1418770:CDS | 55.0% | |
| TGTGACCTCCACCCTTCACA+CGG | + | tig0024639:74843-74862 | None:intergenic | 55.0% | |
| ACCCACTGCAAGAGAGGTCG+CGG | - | tig0024639:74697-74716 | Msa1418770:CDS | 60.0% | |
| ACCGCGACCTCTCTTGCAGT+GGG | + | tig0024639:74701-74720 | None:intergenic | 60.0% | |
| CTCGGAAGACACCGTTTCGC+CGG | - | tig0024639:74802-74821 | Msa1418770:CDS | 60.0% | |
| AGGATCCGTGTGAAGGGTGG+AGG | - | tig0024639:74835-74854 | Msa1418770:CDS | 60.0% | |
| GACCGCGACCTCTCTTGCAG+TGG | + | tig0024639:74702-74721 | None:intergenic | 65.0% | |
| GTGGTCGTGGTGCTCGTGCT+AGG | - | tig0024639:75028-75047 | Msa1418770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024639 | gene | 74649 | 75071 | 74649 | ID=Msa1418770;Name=Msa1418770 |
| tig0024639 | mRNA | 74649 | 75071 | 74649 | ID=Msa1418770-mRNA-1;Parent=Msa1418770;Name=Msa1418770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|140 |
| tig0024639 | exon | 74649 | 75071 | 74649 | ID=Msa1418770-mRNA-1:exon:492;Parent=Msa1418770-mRNA-1 |
| tig0024639 | CDS | 74649 | 75071 | 74649 | ID=Msa1418770-mRNA-1:cds;Parent=Msa1418770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
