AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1246830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1246830 MtrunA17_Chr8g0361551 98.817 507 6 0 11 517 100 606 0.0 1041
Msa1246830 MtrunA17_Chr2g0318991 82.515 509 86 2 11 516 99 607 0.0 877
Msa1246830 MtrunA17_Chr4g0023301 71.899 516 130 6 1 513 1 504 0.0 775
Msa1246830 MtrunA17_Chr5g0421331 63.855 498 162 3 11 508 105 584 0.0 675
Msa1246830 MtrunA17_Chr5g0401641 62.302 504 179 3 11 512 106 600 0.0 660
Msa1246830 MtrunA17_Chr1g0195771 55.227 507 214 5 10 509 140 640 0.0 577
Msa1246830 MtrunA17_Chr5g0401631 59.898 394 138 3 115 506 1 376 1.60e-170 486
Msa1246830 MtrunA17_Chr8g0347391 34.959 492 298 7 13 500 105 578 1.59e-101 317
Msa1246830 MtrunA17_Chr8g0347421 35.497 493 296 7 10 498 95 569 4.61e-101 315
Msa1246830 MtrunA17_Chr8g0347381 34.406 497 300 8 10 500 95 571 3.57e-99 310
Msa1246830 MtrunA17_Chr7g0275471 35.700 493 297 10 13 500 98 575 4.62e-99 310
Msa1246830 MtrunA17_Chr8g0347431 39.506 405 222 5 101 500 11 397 3.24e-98 302
Msa1246830 MtrunA17_Chr7g0259291 32.170 401 249 8 99 490 182 568 8.00e-61 209
Msa1246830 MtrunA17_Chr4g0022401 32.698 315 203 3 13 324 113 421 2.38e-55 191
Msa1246830 MtrunA17_Chr8g0352391 31.193 327 160 8 178 500 3 268 1.67e-43 155
Msa1246830 MtrunA17_Chr4g0022391 38.202 178 104 3 324 500 11 183 2.76e-37 135
Msa1246830 MtrunA17_Chr1g0169871 39.560 182 100 2 235 415 141 313 5.97e-36 137
Msa1246830 MtrunA17_Chr7g0259401 31.624 234 124 4 99 331 51 249 3.17e-31 121
Msa1246830 MtrunA17_Chr5g0401621 58.228 79 33 0 3 81 98 176 1.22e-24 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1246830 AT5G54510.1 83.730 504 82 0 10 513 106 609 0.0 902
Msa1246830 AT4G27260.1 83.101 503 85 0 11 513 107 609 0.0 895
Msa1246830 AT2G14960.1 63.762 505 162 3 10 512 104 589 0.0 675
Msa1246830 AT2G23170.1 63.168 505 169 5 11 512 105 595 0.0 665
Msa1246830 AT4G37390.1 62.253 506 179 5 11 512 106 603 0.0 664
Msa1246830 AT1G28130.1 58.743 509 200 6 10 508 96 604 0.0 619
Msa1246830 AT1G59500.1 58.777 507 189 6 11 512 106 597 0.0 617
Msa1246830 AT1G28130.2 59.436 461 177 6 58 508 1 461 0.0 561
Msa1246830 AT2G47750.1 54.257 505 214 7 10 508 92 585 0.0 550
Msa1246830 AT1G23160.1 50.299 501 222 5 9 500 95 577 3.81e-172 498
Msa1246830 AT5G13320.3 48.898 499 231 3 10 500 92 574 1.39e-170 494
Msa1246830 AT5G13320.1 48.898 499 231 3 10 500 92 574 1.39e-170 494
Msa1246830 AT5G13320.2 48.898 499 231 3 10 500 107 589 1.64e-170 494
Msa1246830 AT5G13370.1 48.134 509 242 7 7 506 91 586 1.18e-166 485
Msa1246830 AT5G13360.1 48.330 509 240 6 7 506 91 585 3.49e-165 481
Msa1246830 AT5G13360.2 48.330 509 240 6 7 506 91 585 3.49e-165 481
Msa1246830 AT5G13360.3 48.330 509 240 6 7 506 169 663 2.37e-164 481
Msa1246830 AT5G13380.1 46.365 509 250 7 7 506 121 615 3.72e-159 466
Msa1246830 AT5G13350.1 45.686 510 255 6 7 507 91 587 4.77e-155 455
Msa1246830 AT5G13350.2 45.686 510 255 6 7 507 91 587 4.77e-155 455
Msa1246830 AT1G48660.2 44.177 498 257 4 13 504 90 572 1.55e-150 443
Msa1246830 AT1G48660.1 44.355 496 256 4 13 504 90 569 6.35e-150 441
Msa1246830 AT5G51470.2 45.455 495 250 3 12 502 5 483 1.44e-149 437
Msa1246830 AT5G51470.1 45.363 496 251 3 11 502 94 573 1.99e-147 435
Msa1246830 AT1G48670.2 50.236 424 192 3 85 504 2 410 8.95e-146 425
Msa1246830 AT1G48670.1 42.744 503 217 6 7 504 85 521 2.29e-129 387
Msa1246830 AT2G46370.3 38.677 499 281 9 7 500 15 493 2.16e-111 340
Msa1246830 AT2G46370.4 38.677 499 281 9 7 500 105 583 2.33e-110 340
Msa1246830 AT2G46370.1 38.677 499 281 9 7 500 94 572 2.49e-110 340
Msa1246830 AT2G46370.2 38.677 499 281 9 7 500 94 572 2.49e-110 340
Msa1246830 AT4G03400.2 35.020 494 306 6 13 500 103 587 8.14e-99 310
Msa1246830 AT4G03400.1 35.020 494 306 6 13 500 103 587 8.14e-99 310
Msa1246830 AT1G48690.1 34.579 107 67 1 10 116 87 190 1.23e-14 72.8

Find 103 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCACAGTATATTCCTATTT+TGG 0.111812 8_2:+38816656 Msa1246830:CDS
GGAGCCCACTTTGGACATTT+AGG 0.154824 8_2:-38817839 None:intergenic
CAAGTTTAGGATCAGGTTTA+AGG 0.254241 8_2:-38816530 None:intergenic
TTTGTTCCTGGTTTAGAAAA+AGG 0.255175 8_2:+38816135 Msa1246830:CDS
AAAATTTAATCACTCTTTGT+AGG 0.278277 8_2:+38818026 Msa1246830:three_prime_UTR
ATGGATTATGCCATTAGTTT+AGG 0.291005 8_2:+38817722 Msa1246830:CDS
TGGATAAAATCAGCAAGTTT+AGG 0.292869 8_2:-38816543 None:intergenic
TTGCTATAATGATCCAAAAT+AGG 0.297088 8_2:-38816669 None:intergenic
ACTGTTGAGTCAGTAATTAA+AGG 0.298239 8_2:-38816486 None:intergenic
GAGCCCACTTTGGACATTTA+GGG 0.311971 8_2:-38817838 None:intergenic
GGTACTTTGGTAGCATTTCA+TGG 0.314807 8_2:+38817950 Msa1246830:three_prime_UTR
ATAAGGTCTATCTCTAAAAT+AGG 0.318744 8_2:-38816250 None:intergenic
GTGATGAGCCAGTTTGTTCC+TGG 0.324174 8_2:+38816123 Msa1246830:CDS
GGACACAGTACAGTTTCATT+TGG 0.346171 8_2:-38816297 None:intergenic
CCAACAATTGAAGACGAGTT+AGG 0.350482 8_2:+38816066 Msa1246830:CDS
TGAGATCAAGATTGTTGAAC+AGG 0.353995 8_2:+38817682 Msa1246830:CDS
CCTAACTCGTCTTCAATTGT+TGG 0.355115 8_2:-38816066 None:intergenic
CTTGGCAGGGGATAATTACT+AGG 0.356717 8_2:+38816586 Msa1246830:CDS
TTGTGCAGTTCTGGGACATC+TGG 0.365207 8_2:+38816024 Msa1246830:CDS
TCTTCATCTCCCTAACATAA+TGG 0.366800 8_2:-38817998 None:intergenic
TTGTAATAGCTAGTTAAAAC+TGG 0.369819 8_2:-38816222 None:intergenic
TCTTTCTCATTAAGAGATCT+AGG 0.375377 8_2:-38816864 None:intergenic
GGGCTTGTGTAGTTTGTGTA+AGG 0.378276 8_2:-38816276 None:intergenic
CTGTTGAGTCAGTAATTAAA+GGG 0.382825 8_2:-38816485 None:intergenic
ATGATAATAAGAATCTTAAA+TGG 0.396333 8_2:+38817901 Msa1246830:three_prime_UTR
AGGGGATAATTACTAGGCTT+TGG 0.396785 8_2:+38816592 Msa1246830:CDS
ACATCCACATACTTGGTATT+AGG 0.400630 8_2:-38816615 None:intergenic
TTATTATGTGGTTGGTACTT+TGG 0.404935 8_2:+38817937 Msa1246830:three_prime_UTR
CTTTGCAATGATATTAGAAC+TGG 0.408730 8_2:+38816453 Msa1246830:CDS
GACACAGTACAGTTTCATTT+GGG 0.411007 8_2:-38816296 None:intergenic
GTTGGTGCTGTATTTGCCTC+TGG 0.411899 8_2:+38816387 Msa1246830:CDS
ATGTATTCTCAACTGCTTTG+TGG 0.413819 8_2:+38816336 Msa1246830:CDS
GAACTAAAGAAGAAGACTTT+AGG 0.417309 8_2:-38818064 None:intergenic
AAATCAGCAAGTTTAGGATC+AGG 0.419446 8_2:-38816537 None:intergenic
TTTCTAAACCAGGAACAAAC+TGG 0.423901 8_2:-38816131 None:intergenic
TACATGCTTTGGTATGAATC+AGG 0.429558 8_2:-38816318 None:intergenic
CAGGTCACTATGTCCTCTAC+TGG 0.430139 8_2:+38817531 Msa1246830:CDS
AATTGAAGCACCTAAACTAA+TGG 0.431562 8_2:-38817732 None:intergenic
GCAGTTGAGAATACATGCTT+TGG 0.432411 8_2:-38816329 None:intergenic
GCTTCTAGTGAATGTTACTT+TGG 0.432831 8_2:+38816720 Msa1246830:CDS
GTCTGCATAGCTAGTGTATT+CGG 0.433199 8_2:-38817495 None:intergenic
CACAATAACATCCACATACT+TGG 0.435316 8_2:-38816622 None:intergenic
GCAGACACAACAACAATTCC+AGG 0.444605 8_2:+38817512 Msa1246830:CDS
CTAGCTACATTATTATTATG+TGG 0.445809 8_2:+38817925 Msa1246830:three_prime_UTR
TTCTAATATCATTGCAAAGA+AGG 0.447565 8_2:-38816449 None:intergenic
CCGAGTTGGTGATGTGTTGA+AGG 0.465454 8_2:+38817319 Msa1246830:CDS
GGTGATGTGTTGAAGGTAGC+TGG 0.472026 8_2:+38817326 Msa1246830:CDS
CAACAATTGAAGACGAGTTA+GGG 0.472679 8_2:+38816067 Msa1246830:CDS
AAATGTCCAAAGTGGGCTCC+TGG 0.483198 8_2:+38817842 Msa1246830:CDS
CTACATTATTATTATGTGGT+TGG 0.484280 8_2:+38817929 Msa1246830:three_prime_UTR
TTAGGTTCCTTGAGAAACAT+TGG 0.484372 8_2:+38816424 Msa1246830:CDS
ACTCAACAGCGTGTATCGAC+AGG 0.486087 8_2:+38817628 Msa1246830:CDS
TAGTTTGTGTAAGGGTCATA+AGG 0.487342 8_2:-38816267 None:intergenic
TGAGAAAGAGCAGAAAGAGT+TGG 0.487483 8_2:+38816878 Msa1246830:CDS
CTTGTTGTCACTACTTATGC+TGG 0.517694 8_2:+38816939 Msa1246830:CDS
GTATCGACAGGGCCGCGTCT+CGG 0.517767 8_2:+38817640 Msa1246830:CDS
GAGTTCAAGAGTTCAACAAC+AGG 0.523704 8_2:-38817791 None:intergenic
GGACTATACCGTTACCGAGT+TGG 0.523842 8_2:+38817305 Msa1246830:intron
GGAACAAACTGGCTCATCAC+TGG 0.525232 8_2:-38816120 None:intergenic
TATGTGGATGTTATTGTGAC+TGG 0.529295 8_2:+38816627 Msa1246830:CDS
GAAGGTTCCAATGTTTCTCA+AGG 0.537967 8_2:-38816431 None:intergenic
GGCTTGTGTAGTTTGTGTAA+GGG 0.539250 8_2:-38816275 None:intergenic
TTGTTGAACTCTTGAACTCA+AGG 0.540254 8_2:+38817795 Msa1246830:CDS
TCGGACACGGTTGCATCGAA+TGG 0.543360 8_2:-38817476 None:intergenic
CGCGTCTCGGACAAATCTAT+CGG 0.552359 8_2:+38817653 Msa1246830:CDS
GAACTTGTTGATGTCAAACT+TGG 0.554297 8_2:+38816903 Msa1246830:CDS
TTATGACCAGGAGCCCACTT+TGG 0.554897 8_2:-38817848 None:intergenic
GGGCTCCTGGTCATAAGCAA+TGG 0.566694 8_2:+38817855 Msa1246830:CDS
TTGGCCTAATACCAAGTATG+TGG 0.569778 8_2:+38816611 Msa1246830:CDS
TGCAGTTCTGGGACATCTGG+AGG 0.569833 8_2:+38816027 Msa1246830:CDS
ACACCATTACTTCTATTCAC+AGG 0.573990 8_2:-38816822 None:intergenic
CTTCACAAGGTTGACAAAGA+GGG 0.577215 8_2:-38816755 None:intergenic
TTGCCTGTGAATAGAAGTAA+TGG 0.577251 8_2:+38816819 Msa1246830:CDS
TGGTCTTTGTCAAAACAAAG+AGG 0.579177 8_2:+38816356 Msa1246830:CDS
ACTTCACAAGGTTGACAAAG+AGG 0.579548 8_2:-38816756 None:intergenic
TTGATCCATTGCTTATGACC+AGG 0.582743 8_2:-38817860 None:intergenic
AATTCAAAGTAGCACATGGT+AGG 0.583971 8_2:-38816795 None:intergenic
TCAGAGTGAGTTCCCAGTAG+AGG 0.584102 8_2:-38817544 None:intergenic
GGTGCAAACTTCACACACCT+TGG 0.586326 8_2:-38817770 None:intergenic
CCTAATGTTTATAAAATCTG+AGG 0.588832 8_2:+38816170 Msa1246830:CDS
TGTTGAACTCTTGAACTCAA+GGG 0.593725 8_2:+38817796 Msa1246830:CDS
TCAACAATCTTGATCTCAAG+CGG 0.595363 8_2:-38817677 None:intergenic
AAATCTGAGGCTAAAACACC+TGG 0.603615 8_2:+38816183 Msa1246830:CDS
CAGTAGAGGACATAGTGACC+TGG 0.605308 8_2:-38817530 None:intergenic
CCTTCAACACATCACCAACT+CGG 0.608774 8_2:-38817319 None:intergenic
CACCTGGTGGAATTGTAGCT+AGG 0.610611 8_2:+38816199 Msa1246830:CDS
AGGTCACTATGTCCTCTACT+GGG 0.614973 8_2:+38817532 Msa1246830:CDS
CGGCACACGAAGTTGAATTG+CGG 0.616034 8_2:-38817365 None:intergenic
GGCCTAGCTACAATTCCACC+AGG 0.617990 8_2:-38816201 None:intergenic
GCATACATAGTGCAAACAAG+TGG 0.618340 8_2:-38816699 None:intergenic
TCTGAGGCTAAAACACCTGG+TGG 0.620910 8_2:+38816186 Msa1246830:CDS
ACACATCACCAACTCGGTAA+CGG 0.631028 8_2:-38817313 None:intergenic
CTCAACAGCGTGTATCGACA+GGG 0.631957 8_2:+38817629 Msa1246830:CDS
CGATAGATTTGTCCGAGACG+CGG 0.631989 8_2:-38817652 None:intergenic
TAGCCCTAAATGTCCAAAGT+GGG 0.635686 8_2:+38817835 Msa1246830:CDS
CAATTGAAGACGAGTTAGGG+AGG 0.639368 8_2:+38816070 Msa1246830:CDS
AGTTGAGCTTCAAAATGCAA+TGG 0.645898 8_2:+38817430 Msa1246830:CDS
TTAGCCCTAAATGTCCAAAG+TGG 0.647825 8_2:+38817834 Msa1246830:CDS
AATAGCCCTTATAAAACCAG+AGG 0.675707 8_2:-38816403 None:intergenic
ATAGCTAGTGTATTCGGACA+CGG 0.679053 8_2:-38817489 None:intergenic
GAGATCAAGATTGTTGAACA+GGG 0.686060 8_2:+38817683 Msa1246830:CDS
TTAATCAGTACAAGACACCA+AGG 0.718724 8_2:+38817753 Msa1246830:CDS
AGAGTATAAGACACTTCACA+AGG 0.729079 8_2:-38816768 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATTAAATTAAAAGTT+TGG - chr8_2:38817011-38817030 None:intergenic 10.0%
!! GAAAAATTAAATTAAAAGTT+TGG - chr8_2:38817011-38817030 None:intergenic 10.0%
!! ATGATAATAAGAATCTTAAA+TGG + chr8_2:38817901-38817920 Msa1246830:three_prime_UTR 15.0%
!! ATGATAATAAGAATCTTAAA+TGG + chr8_2:38817901-38817920 Msa1246830:three_prime_UTR 15.0%
!!! TGTTTGTCAATTTTTTTCTT+AGG + chr8_2:38817284-38817303 Msa1246830:intron 20.0%
!! AAAATTTAATCACTCTTTGT+AGG + chr8_2:38818026-38818045 Msa1246830:three_prime_UTR 20.0%
!!! TGTTTGTCAATTTTTTTCTT+AGG + chr8_2:38817284-38817303 Msa1246830:intron 20.0%
!! AAAATTTAATCACTCTTTGT+AGG + chr8_2:38818026-38818045 Msa1246830:three_prime_UTR 20.0%
!!! AAATTTATTTTGTGCAGTTC+TGG + chr8_2:38816015-38816034 Msa1246830:CDS 25.0%
!!! AATTTATTTTGTGCAGTTCT+GGG + chr8_2:38816016-38816035 Msa1246830:CDS 25.0%
!! CCTCAGATTTTATAAACATT+AGG - chr8_2:38816173-38816192 None:intergenic 25.0%
! CCTAATGTTTATAAAATCTG+AGG + chr8_2:38816170-38816189 Msa1246830:CDS 25.0%
! TTGTAATAGCTAGTTAAAAC+TGG - chr8_2:38816225-38816244 None:intergenic 25.0%
!!! ATAAGGTCTATCTCTAAAAT+AGG - chr8_2:38816253-38816272 None:intergenic 25.0%
!!! TCAAAACAAAGAGGTTTTAA+GGG + chr8_2:38816365-38816384 Msa1246830:CDS 25.0%
! TTCTAATATCATTGCAAAGA+AGG - chr8_2:38816452-38816471 None:intergenic 25.0%
!! AATTTTTACTACACTCAGTT+TGG - chr8_2:38816566-38816585 None:intergenic 25.0%
! TTGCTATAATGATCCAAAAT+AGG - chr8_2:38816672-38816691 None:intergenic 25.0%
!! ATTTTGGATCATTATAGCAA+TGG + chr8_2:38816672-38816691 Msa1246830:CDS 25.0%
! CTAGCTACATTATTATTATG+TGG + chr8_2:38817925-38817944 Msa1246830:three_prime_UTR 25.0%
! CTACATTATTATTATGTGGT+TGG + chr8_2:38817929-38817948 Msa1246830:three_prime_UTR 25.0%
!! TTTTTATGGCCATTATGTTA+GGG + chr8_2:38817989-38818008 Msa1246830:three_prime_UTR 25.0%
!!! AAATTTATTTTGTGCAGTTC+TGG + chr8_2:38816015-38816034 Msa1246830:CDS 25.0%
!!! AATTTATTTTGTGCAGTTCT+GGG + chr8_2:38816016-38816035 Msa1246830:CDS 25.0%
!! CCTCAGATTTTATAAACATT+AGG - chr8_2:38816173-38816192 None:intergenic 25.0%
! CCTAATGTTTATAAAATCTG+AGG + chr8_2:38816170-38816189 Msa1246830:CDS 25.0%
! TTGTAATAGCTAGTTAAAAC+TGG - chr8_2:38816225-38816244 None:intergenic 25.0%
!!! ATAAGGTCTATCTCTAAAAT+AGG - chr8_2:38816253-38816272 None:intergenic 25.0%
!!! TCAAAACAAAGAGGTTTTAA+GGG + chr8_2:38816365-38816384 Msa1246830:CDS 25.0%
! TTCTAATATCATTGCAAAGA+AGG - chr8_2:38816452-38816471 None:intergenic 25.0%
!! AATTTTTACTACACTCAGTT+TGG - chr8_2:38816566-38816585 None:intergenic 25.0%
! TTGCTATAATGATCCAAAAT+AGG - chr8_2:38816672-38816691 None:intergenic 25.0%
!! ATTTTGGATCATTATAGCAA+TGG + chr8_2:38816672-38816691 Msa1246830:CDS 25.0%
! CTAGCTACATTATTATTATG+TGG + chr8_2:38817925-38817944 Msa1246830:three_prime_UTR 25.0%
! CTACATTATTATTATGTGGT+TGG + chr8_2:38817929-38817948 Msa1246830:three_prime_UTR 25.0%
!! TTTTTATGGCCATTATGTTA+GGG + chr8_2:38817989-38818008 Msa1246830:three_prime_UTR 25.0%
TTTGTTCCTGGTTTAGAAAA+AGG + chr8_2:38816135-38816154 Msa1246830:CDS 30.0%
TTGTTCCTGGTTTAGAAAAA+GGG + chr8_2:38816136-38816155 Msa1246830:CDS 30.0%
! GTCAAAACAAAGAGGTTTTA+AGG + chr8_2:38816364-38816383 Msa1246830:CDS 30.0%
!!! TATTTGCCTCTGGTTTTATA+AGG + chr8_2:38816397-38816416 Msa1246830:CDS 30.0%
!!! ATTTGCCTCTGGTTTTATAA+GGG + chr8_2:38816398-38816417 Msa1246830:CDS 30.0%
CTTTGCAATGATATTAGAAC+TGG + chr8_2:38816453-38816472 Msa1246830:CDS 30.0%
CTGTTGAGTCAGTAATTAAA+GGG - chr8_2:38816488-38816507 None:intergenic 30.0%
ACTGTTGAGTCAGTAATTAA+AGG - chr8_2:38816489-38816508 None:intergenic 30.0%
TGGATAAAATCAGCAAGTTT+AGG - chr8_2:38816546-38816565 None:intergenic 30.0%
CTGAGTGTAGTAAAAATTCT+TGG + chr8_2:38816568-38816587 Msa1246830:CDS 30.0%
TGTAGTAAAAATTCTTGGCA+GGG + chr8_2:38816573-38816592 Msa1246830:CDS 30.0%
! GTCACAGTATATTCCTATTT+TGG + chr8_2:38816656-38816675 Msa1246830:CDS 30.0%
CAAAAATTCAAAGTAGCACA+TGG - chr8_2:38816802-38816821 None:intergenic 30.0%
TCTTTCTCATTAAGAGATCT+AGG - chr8_2:38816867-38816886 None:intergenic 30.0%
TGTGTAACTGTAAACAGATT+TGG + chr8_2:38817220-38817239 Msa1246830:intron 30.0%
!!! TGCTCAATACCACATTTTTT+CGG - chr8_2:38817388-38817407 None:intergenic 30.0%
! ATGGATTATGCCATTAGTTT+AGG + chr8_2:38817722-38817741 Msa1246830:CDS 30.0%
! AATTGAAGCACCTAAACTAA+TGG - chr8_2:38817735-38817754 None:intergenic 30.0%
! TTATTATGTGGTTGGTACTT+TGG + chr8_2:38817937-38817956 Msa1246830:three_prime_UTR 30.0%
!!! GTTCATGTGAACTGTTTTTA+TGG + chr8_2:38817975-38817994 Msa1246830:three_prime_UTR 30.0%
! GTTTTTATGGCCATTATGTT+AGG + chr8_2:38817988-38818007 Msa1246830:three_prime_UTR 30.0%
GAACTAAAGAAGAAGACTTT+AGG - chr8_2:38818067-38818086 None:intergenic 30.0%
TTTGTTCCTGGTTTAGAAAA+AGG + chr8_2:38816135-38816154 Msa1246830:CDS 30.0%
TTGTTCCTGGTTTAGAAAAA+GGG + chr8_2:38816136-38816155 Msa1246830:CDS 30.0%
! GTCAAAACAAAGAGGTTTTA+AGG + chr8_2:38816364-38816383 Msa1246830:CDS 30.0%
!!! TATTTGCCTCTGGTTTTATA+AGG + chr8_2:38816397-38816416 Msa1246830:CDS 30.0%
!!! ATTTGCCTCTGGTTTTATAA+GGG + chr8_2:38816398-38816417 Msa1246830:CDS 30.0%
CTTTGCAATGATATTAGAAC+TGG + chr8_2:38816453-38816472 Msa1246830:CDS 30.0%
CTGTTGAGTCAGTAATTAAA+GGG - chr8_2:38816488-38816507 None:intergenic 30.0%
ACTGTTGAGTCAGTAATTAA+AGG - chr8_2:38816489-38816508 None:intergenic 30.0%
TGGATAAAATCAGCAAGTTT+AGG - chr8_2:38816546-38816565 None:intergenic 30.0%
CTGAGTGTAGTAAAAATTCT+TGG + chr8_2:38816568-38816587 Msa1246830:CDS 30.0%
TGTAGTAAAAATTCTTGGCA+GGG + chr8_2:38816573-38816592 Msa1246830:CDS 30.0%
! GTCACAGTATATTCCTATTT+TGG + chr8_2:38816656-38816675 Msa1246830:CDS 30.0%
CAAAAATTCAAAGTAGCACA+TGG - chr8_2:38816802-38816821 None:intergenic 30.0%
TCTTTCTCATTAAGAGATCT+AGG - chr8_2:38816867-38816886 None:intergenic 30.0%
TGTGTAACTGTAAACAGATT+TGG + chr8_2:38817220-38817239 Msa1246830:intron 30.0%
!!! TGCTCAATACCACATTTTTT+CGG - chr8_2:38817388-38817407 None:intergenic 30.0%
! ATGGATTATGCCATTAGTTT+AGG + chr8_2:38817722-38817741 Msa1246830:CDS 30.0%
! AATTGAAGCACCTAAACTAA+TGG - chr8_2:38817735-38817754 None:intergenic 30.0%
! TTATTATGTGGTTGGTACTT+TGG + chr8_2:38817937-38817956 Msa1246830:three_prime_UTR 30.0%
!!! GTTCATGTGAACTGTTTTTA+TGG + chr8_2:38817975-38817994 Msa1246830:three_prime_UTR 30.0%
! GTTTTTATGGCCATTATGTT+AGG + chr8_2:38817988-38818007 Msa1246830:three_prime_UTR 30.0%
GAACTAAAGAAGAAGACTTT+AGG - chr8_2:38818067-38818086 None:intergenic 30.0%
CAACAATTGAAGACGAGTTA+GGG + chr8_2:38816067-38816086 Msa1246830:CDS 35.0%
TTTCTAAACCAGGAACAAAC+TGG - chr8_2:38816134-38816153 None:intergenic 35.0%
! TAGTTTGTGTAAGGGTCATA+AGG - chr8_2:38816270-38816289 None:intergenic 35.0%
GACACAGTACAGTTTCATTT+GGG - chr8_2:38816299-38816318 None:intergenic 35.0%
TACATGCTTTGGTATGAATC+AGG - chr8_2:38816321-38816340 None:intergenic 35.0%
ATGTATTCTCAACTGCTTTG+TGG + chr8_2:38816336-38816355 Msa1246830:CDS 35.0%
TGGTCTTTGTCAAAACAAAG+AGG + chr8_2:38816356-38816375 Msa1246830:CDS 35.0%
!!! AACAAAGAGGTTTTAAGGGT+TGG + chr8_2:38816369-38816388 Msa1246830:CDS 35.0%
AATAGCCCTTATAAAACCAG+AGG - chr8_2:38816406-38816425 None:intergenic 35.0%
!!! CTGGTTTTATAAGGGCTATT+AGG + chr8_2:38816406-38816425 Msa1246830:CDS 35.0%
TTAGGTTCCTTGAGAAACAT+TGG + chr8_2:38816424-38816443 Msa1246830:CDS 35.0%
! CAAGTTTAGGATCAGGTTTA+AGG - chr8_2:38816533-38816552 None:intergenic 35.0%
! AAATCAGCAAGTTTAGGATC+AGG - chr8_2:38816540-38816559 None:intergenic 35.0%
GTGTAGTAAAAATTCTTGGC+AGG + chr8_2:38816572-38816591 Msa1246830:CDS 35.0%
GTAGTAAAAATTCTTGGCAG+GGG + chr8_2:38816574-38816593 Msa1246830:CDS 35.0%
ACATCCACATACTTGGTATT+AGG - chr8_2:38816618-38816637 None:intergenic 35.0%
CACAATAACATCCACATACT+TGG - chr8_2:38816625-38816644 None:intergenic 35.0%
TATGTGGATGTTATTGTGAC+TGG + chr8_2:38816627-38816646 Msa1246830:CDS 35.0%
! GCTTCTAGTGAATGTTACTT+TGG + chr8_2:38816720-38816739 Msa1246830:CDS 35.0%
AGAGTATAAGACACTTCACA+AGG - chr8_2:38816771-38816790 None:intergenic 35.0%
AATTCAAAGTAGCACATGGT+AGG - chr8_2:38816798-38816817 None:intergenic 35.0%
TTGCCTGTGAATAGAAGTAA+TGG + chr8_2:38816819-38816838 Msa1246830:CDS 35.0%
ACACCATTACTTCTATTCAC+AGG - chr8_2:38816825-38816844 None:intergenic 35.0%
!! GAACTTGTTGATGTCAAACT+TGG + chr8_2:38816903-38816922 Msa1246830:CDS 35.0%
AGTTGAGCTTCAAAATGCAA+TGG + chr8_2:38817430-38817449 Msa1246830:CDS 35.0%
CAATCTTCAAAAACACAAGG+TGG - chr8_2:38817587-38817606 None:intergenic 35.0%
CAGCAATCTTCAAAAACACA+AGG - chr8_2:38817590-38817609 None:intergenic 35.0%
TCAACAATCTTGATCTCAAG+CGG - chr8_2:38817680-38817699 None:intergenic 35.0%
TGAGATCAAGATTGTTGAAC+AGG + chr8_2:38817682-38817701 Msa1246830:CDS 35.0%
GAGATCAAGATTGTTGAACA+GGG + chr8_2:38817683-38817702 Msa1246830:CDS 35.0%
TTAATCAGTACAAGACACCA+AGG + chr8_2:38817753-38817772 Msa1246830:CDS 35.0%
TTGTTGAACTCTTGAACTCA+AGG + chr8_2:38817795-38817814 Msa1246830:CDS 35.0%
TGTTGAACTCTTGAACTCAA+GGG + chr8_2:38817796-38817815 Msa1246830:CDS 35.0%
TCTTCATCTCCCTAACATAA+TGG - chr8_2:38818001-38818020 None:intergenic 35.0%
!!! AATTGCTTTTTACAGTGGCT+AGG - chr8_2:38818144-38818163 None:intergenic 35.0%
CAACAATTGAAGACGAGTTA+GGG + chr8_2:38816067-38816086 Msa1246830:CDS 35.0%
TTTCTAAACCAGGAACAAAC+TGG - chr8_2:38816134-38816153 None:intergenic 35.0%
! TAGTTTGTGTAAGGGTCATA+AGG - chr8_2:38816270-38816289 None:intergenic 35.0%
GACACAGTACAGTTTCATTT+GGG - chr8_2:38816299-38816318 None:intergenic 35.0%
TACATGCTTTGGTATGAATC+AGG - chr8_2:38816321-38816340 None:intergenic 35.0%
ATGTATTCTCAACTGCTTTG+TGG + chr8_2:38816336-38816355 Msa1246830:CDS 35.0%
TGGTCTTTGTCAAAACAAAG+AGG + chr8_2:38816356-38816375 Msa1246830:CDS 35.0%
!!! AACAAAGAGGTTTTAAGGGT+TGG + chr8_2:38816369-38816388 Msa1246830:CDS 35.0%
AATAGCCCTTATAAAACCAG+AGG - chr8_2:38816406-38816425 None:intergenic 35.0%
!!! CTGGTTTTATAAGGGCTATT+AGG + chr8_2:38816406-38816425 Msa1246830:CDS 35.0%
TTAGGTTCCTTGAGAAACAT+TGG + chr8_2:38816424-38816443 Msa1246830:CDS 35.0%
! CAAGTTTAGGATCAGGTTTA+AGG - chr8_2:38816533-38816552 None:intergenic 35.0%
! AAATCAGCAAGTTTAGGATC+AGG - chr8_2:38816540-38816559 None:intergenic 35.0%
GTGTAGTAAAAATTCTTGGC+AGG + chr8_2:38816572-38816591 Msa1246830:CDS 35.0%
GTAGTAAAAATTCTTGGCAG+GGG + chr8_2:38816574-38816593 Msa1246830:CDS 35.0%
ACATCCACATACTTGGTATT+AGG - chr8_2:38816618-38816637 None:intergenic 35.0%
CACAATAACATCCACATACT+TGG - chr8_2:38816625-38816644 None:intergenic 35.0%
TATGTGGATGTTATTGTGAC+TGG + chr8_2:38816627-38816646 Msa1246830:CDS 35.0%
! GCTTCTAGTGAATGTTACTT+TGG + chr8_2:38816720-38816739 Msa1246830:CDS 35.0%
AGAGTATAAGACACTTCACA+AGG - chr8_2:38816771-38816790 None:intergenic 35.0%
AATTCAAAGTAGCACATGGT+AGG - chr8_2:38816798-38816817 None:intergenic 35.0%
TTGCCTGTGAATAGAAGTAA+TGG + chr8_2:38816819-38816838 Msa1246830:CDS 35.0%
ACACCATTACTTCTATTCAC+AGG - chr8_2:38816825-38816844 None:intergenic 35.0%
!! GAACTTGTTGATGTCAAACT+TGG + chr8_2:38816903-38816922 Msa1246830:CDS 35.0%
AGTTGAGCTTCAAAATGCAA+TGG + chr8_2:38817430-38817449 Msa1246830:CDS 35.0%
CAATCTTCAAAAACACAAGG+TGG - chr8_2:38817587-38817606 None:intergenic 35.0%
CAGCAATCTTCAAAAACACA+AGG - chr8_2:38817590-38817609 None:intergenic 35.0%
TCAACAATCTTGATCTCAAG+CGG - chr8_2:38817680-38817699 None:intergenic 35.0%
TGAGATCAAGATTGTTGAAC+AGG + chr8_2:38817682-38817701 Msa1246830:CDS 35.0%
GAGATCAAGATTGTTGAACA+GGG + chr8_2:38817683-38817702 Msa1246830:CDS 35.0%
TTAATCAGTACAAGACACCA+AGG + chr8_2:38817753-38817772 Msa1246830:CDS 35.0%
TTGTTGAACTCTTGAACTCA+AGG + chr8_2:38817795-38817814 Msa1246830:CDS 35.0%
TGTTGAACTCTTGAACTCAA+GGG + chr8_2:38817796-38817815 Msa1246830:CDS 35.0%
TCTTCATCTCCCTAACATAA+TGG - chr8_2:38818001-38818020 None:intergenic 35.0%
!!! AATTGCTTTTTACAGTGGCT+AGG - chr8_2:38818144-38818163 None:intergenic 35.0%
CCTAACTCGTCTTCAATTGT+TGG - chr8_2:38816069-38816088 None:intergenic 40.0%
CCAACAATTGAAGACGAGTT+AGG + chr8_2:38816066-38816085 Msa1246830:CDS 40.0%
! CCTTTCCCTTTTTCTAAACC+AGG - chr8_2:38816144-38816163 None:intergenic 40.0%
CCTGGTTTAGAAAAAGGGAA+AGG + chr8_2:38816141-38816160 Msa1246830:CDS 40.0%
! AAATCTGAGGCTAAAACACC+TGG + chr8_2:38816183-38816202 Msa1246830:CDS 40.0%
! GGCTTGTGTAGTTTGTGTAA+GGG - chr8_2:38816278-38816297 None:intergenic 40.0%
GGACACAGTACAGTTTCATT+TGG - chr8_2:38816300-38816319 None:intergenic 40.0%
GCAGTTGAGAATACATGCTT+TGG - chr8_2:38816332-38816351 None:intergenic 40.0%
GAAGGTTCCAATGTTTCTCA+AGG - chr8_2:38816434-38816453 None:intergenic 40.0%
AGGGGATAATTACTAGGCTT+TGG + chr8_2:38816592-38816611 Msa1246830:CDS 40.0%
TTGGCCTAATACCAAGTATG+TGG + chr8_2:38816611-38816630 Msa1246830:CDS 40.0%
GCATACATAGTGCAAACAAG+TGG - chr8_2:38816702-38816721 None:intergenic 40.0%
CTTCACAAGGTTGACAAAGA+GGG - chr8_2:38816758-38816777 None:intergenic 40.0%
ACTTCACAAGGTTGACAAAG+AGG - chr8_2:38816759-38816778 None:intergenic 40.0%
TGAGAAAGAGCAGAAAGAGT+TGG + chr8_2:38816878-38816897 Msa1246830:CDS 40.0%
! CTTGTTGTCACTACTTATGC+TGG + chr8_2:38816939-38816958 Msa1246830:CDS 40.0%
CAGTGAGATAGACAGAATCA+CGG - chr8_2:38817181-38817200 None:intergenic 40.0%
ATAGCTAGTGTATTCGGACA+CGG - chr8_2:38817492-38817511 None:intergenic 40.0%
GTCTGCATAGCTAGTGTATT+CGG - chr8_2:38817498-38817517 None:intergenic 40.0%
! GGGCACTTTTGATAAGCTAA+TGG + chr8_2:38817703-38817722 Msa1246830:CDS 40.0%
GAGTTCAAGAGTTCAACAAC+AGG - chr8_2:38817794-38817813 None:intergenic 40.0%
TTAGCCCTAAATGTCCAAAG+TGG + chr8_2:38817834-38817853 Msa1246830:CDS 40.0%
TAGCCCTAAATGTCCAAAGT+GGG + chr8_2:38817835-38817854 Msa1246830:CDS 40.0%
TTGATCCATTGCTTATGACC+AGG - chr8_2:38817863-38817882 None:intergenic 40.0%
! GGTACTTTGGTAGCATTTCA+TGG + chr8_2:38817950-38817969 Msa1246830:three_prime_UTR 40.0%
CCTAACTCGTCTTCAATTGT+TGG - chr8_2:38816069-38816088 None:intergenic 40.0%
CCAACAATTGAAGACGAGTT+AGG + chr8_2:38816066-38816085 Msa1246830:CDS 40.0%
! CCTTTCCCTTTTTCTAAACC+AGG - chr8_2:38816144-38816163 None:intergenic 40.0%
CCTGGTTTAGAAAAAGGGAA+AGG + chr8_2:38816141-38816160 Msa1246830:CDS 40.0%
! AAATCTGAGGCTAAAACACC+TGG + chr8_2:38816183-38816202 Msa1246830:CDS 40.0%
! GGCTTGTGTAGTTTGTGTAA+GGG - chr8_2:38816278-38816297 None:intergenic 40.0%
GGACACAGTACAGTTTCATT+TGG - chr8_2:38816300-38816319 None:intergenic 40.0%
GCAGTTGAGAATACATGCTT+TGG - chr8_2:38816332-38816351 None:intergenic 40.0%
GAAGGTTCCAATGTTTCTCA+AGG - chr8_2:38816434-38816453 None:intergenic 40.0%
AGGGGATAATTACTAGGCTT+TGG + chr8_2:38816592-38816611 Msa1246830:CDS 40.0%
TTGGCCTAATACCAAGTATG+TGG + chr8_2:38816611-38816630 Msa1246830:CDS 40.0%
GCATACATAGTGCAAACAAG+TGG - chr8_2:38816702-38816721 None:intergenic 40.0%
CTTCACAAGGTTGACAAAGA+GGG - chr8_2:38816758-38816777 None:intergenic 40.0%
ACTTCACAAGGTTGACAAAG+AGG - chr8_2:38816759-38816778 None:intergenic 40.0%
TGAGAAAGAGCAGAAAGAGT+TGG + chr8_2:38816878-38816897 Msa1246830:CDS 40.0%
! CTTGTTGTCACTACTTATGC+TGG + chr8_2:38816939-38816958 Msa1246830:CDS 40.0%
CAGTGAGATAGACAGAATCA+CGG - chr8_2:38817181-38817200 None:intergenic 40.0%
ATAGCTAGTGTATTCGGACA+CGG - chr8_2:38817492-38817511 None:intergenic 40.0%
GTCTGCATAGCTAGTGTATT+CGG - chr8_2:38817498-38817517 None:intergenic 40.0%
! GGGCACTTTTGATAAGCTAA+TGG + chr8_2:38817703-38817722 Msa1246830:CDS 40.0%
GAGTTCAAGAGTTCAACAAC+AGG - chr8_2:38817794-38817813 None:intergenic 40.0%
TTAGCCCTAAATGTCCAAAG+TGG + chr8_2:38817834-38817853 Msa1246830:CDS 40.0%
TAGCCCTAAATGTCCAAAGT+GGG + chr8_2:38817835-38817854 Msa1246830:CDS 40.0%
TTGATCCATTGCTTATGACC+AGG - chr8_2:38817863-38817882 None:intergenic 40.0%
! GGTACTTTGGTAGCATTTCA+TGG + chr8_2:38817950-38817969 Msa1246830:three_prime_UTR 40.0%
CAATTGAAGACGAGTTAGGG+AGG + chr8_2:38816070-38816089 Msa1246830:CDS 45.0%
! GGGCTTGTGTAGTTTGTGTA+AGG - chr8_2:38816279-38816298 None:intergenic 45.0%
CTTGGCAGGGGATAATTACT+AGG + chr8_2:38816586-38816605 Msa1246830:CDS 45.0%
CCACGTGATTGTAGCAATTG+AGG - chr8_2:38817075-38817094 None:intergenic 45.0%
CCTCAATTGCTACAATCACG+TGG + chr8_2:38817072-38817091 Msa1246830:intron 45.0%
ACACATCACCAACTCGGTAA+CGG - chr8_2:38817316-38817335 None:intergenic 45.0%
CCTTCAACACATCACCAACT+CGG - chr8_2:38817322-38817341 None:intergenic 45.0%
CTTCGTGTGCCGAAAAAATG+TGG + chr8_2:38817376-38817395 Msa1246830:CDS 45.0%
GCAGACACAACAACAATTCC+AGG + chr8_2:38817512-38817531 Msa1246830:CDS 45.0%
AGGTCACTATGTCCTCTACT+GGG + chr8_2:38817532-38817551 Msa1246830:CDS 45.0%
GAGCCCACTTTGGACATTTA+GGG - chr8_2:38817841-38817860 None:intergenic 45.0%
CAATTGAAGACGAGTTAGGG+AGG + chr8_2:38816070-38816089 Msa1246830:CDS 45.0%
! GGGCTTGTGTAGTTTGTGTA+AGG - chr8_2:38816279-38816298 None:intergenic 45.0%
CTTGGCAGGGGATAATTACT+AGG + chr8_2:38816586-38816605 Msa1246830:CDS 45.0%
CCACGTGATTGTAGCAATTG+AGG - chr8_2:38817075-38817094 None:intergenic 45.0%
CCTCAATTGCTACAATCACG+TGG + chr8_2:38817072-38817091 Msa1246830:intron 45.0%
ACACATCACCAACTCGGTAA+CGG - chr8_2:38817316-38817335 None:intergenic 45.0%
CCTTCAACACATCACCAACT+CGG - chr8_2:38817322-38817341 None:intergenic 45.0%
CTTCGTGTGCCGAAAAAATG+TGG + chr8_2:38817376-38817395 Msa1246830:CDS 45.0%
GCAGACACAACAACAATTCC+AGG + chr8_2:38817512-38817531 Msa1246830:CDS 45.0%
AGGTCACTATGTCCTCTACT+GGG + chr8_2:38817532-38817551 Msa1246830:CDS 45.0%
GAGCCCACTTTGGACATTTA+GGG - chr8_2:38817841-38817860 None:intergenic 45.0%
!! TTGTGCAGTTCTGGGACATC+TGG + chr8_2:38816024-38816043 Msa1246830:CDS 50.0%
! GGAACAAACTGGCTCATCAC+TGG - chr8_2:38816123-38816142 None:intergenic 50.0%
! GTGATGAGCCAGTTTGTTCC+TGG + chr8_2:38816123-38816142 Msa1246830:CDS 50.0%
! TCTGAGGCTAAAACACCTGG+TGG + chr8_2:38816186-38816205 Msa1246830:CDS 50.0%
CACCTGGTGGAATTGTAGCT+AGG + chr8_2:38816199-38816218 Msa1246830:CDS 50.0%
!! GTTGGTGCTGTATTTGCCTC+TGG + chr8_2:38816387-38816406 Msa1246830:CDS 50.0%
GGACTATACCGTTACCGAGT+TGG + chr8_2:38817305-38817324 Msa1246830:intron 50.0%
!! CCGAGTTGGTGATGTGTTGA+AGG + chr8_2:38817319-38817338 Msa1246830:CDS 50.0%
GGTGATGTGTTGAAGGTAGC+TGG + chr8_2:38817326-38817345 Msa1246830:CDS 50.0%
CGGCACACGAAGTTGAATTG+CGG - chr8_2:38817368-38817387 None:intergenic 50.0%
CAGTAGAGGACATAGTGACC+TGG - chr8_2:38817533-38817552 None:intergenic 50.0%
CAGGTCACTATGTCCTCTAC+TGG + chr8_2:38817531-38817550 Msa1246830:CDS 50.0%
TCAGAGTGAGTTCCCAGTAG+AGG - chr8_2:38817547-38817566 None:intergenic 50.0%
! ACTCAACAGCGTGTATCGAC+AGG + chr8_2:38817628-38817647 Msa1246830:CDS 50.0%
! CTCAACAGCGTGTATCGACA+GGG + chr8_2:38817629-38817648 Msa1246830:CDS 50.0%
CGATAGATTTGTCCGAGACG+CGG - chr8_2:38817655-38817674 None:intergenic 50.0%
CGCGTCTCGGACAAATCTAT+CGG + chr8_2:38817653-38817672 Msa1246830:CDS 50.0%
GGTGCAAACTTCACACACCT+TGG - chr8_2:38817773-38817792 None:intergenic 50.0%
GGAGCCCACTTTGGACATTT+AGG - chr8_2:38817842-38817861 None:intergenic 50.0%
! AAATGTCCAAAGTGGGCTCC+TGG + chr8_2:38817842-38817861 Msa1246830:CDS 50.0%
TTATGACCAGGAGCCCACTT+TGG - chr8_2:38817851-38817870 None:intergenic 50.0%
!! TTGTGCAGTTCTGGGACATC+TGG + chr8_2:38816024-38816043 Msa1246830:CDS 50.0%
! GGAACAAACTGGCTCATCAC+TGG - chr8_2:38816123-38816142 None:intergenic 50.0%
! GTGATGAGCCAGTTTGTTCC+TGG + chr8_2:38816123-38816142 Msa1246830:CDS 50.0%
! TCTGAGGCTAAAACACCTGG+TGG + chr8_2:38816186-38816205 Msa1246830:CDS 50.0%
CACCTGGTGGAATTGTAGCT+AGG + chr8_2:38816199-38816218 Msa1246830:CDS 50.0%
!! GTTGGTGCTGTATTTGCCTC+TGG + chr8_2:38816387-38816406 Msa1246830:CDS 50.0%
GGACTATACCGTTACCGAGT+TGG + chr8_2:38817305-38817324 Msa1246830:intron 50.0%
!! CCGAGTTGGTGATGTGTTGA+AGG + chr8_2:38817319-38817338 Msa1246830:CDS 50.0%
GGTGATGTGTTGAAGGTAGC+TGG + chr8_2:38817326-38817345 Msa1246830:CDS 50.0%
CGGCACACGAAGTTGAATTG+CGG - chr8_2:38817368-38817387 None:intergenic 50.0%
CAGTAGAGGACATAGTGACC+TGG - chr8_2:38817533-38817552 None:intergenic 50.0%
CAGGTCACTATGTCCTCTAC+TGG + chr8_2:38817531-38817550 Msa1246830:CDS 50.0%
TCAGAGTGAGTTCCCAGTAG+AGG - chr8_2:38817547-38817566 None:intergenic 50.0%
! ACTCAACAGCGTGTATCGAC+AGG + chr8_2:38817628-38817647 Msa1246830:CDS 50.0%
! CTCAACAGCGTGTATCGACA+GGG + chr8_2:38817629-38817648 Msa1246830:CDS 50.0%
CGATAGATTTGTCCGAGACG+CGG - chr8_2:38817655-38817674 None:intergenic 50.0%
CGCGTCTCGGACAAATCTAT+CGG + chr8_2:38817653-38817672 Msa1246830:CDS 50.0%
GGTGCAAACTTCACACACCT+TGG - chr8_2:38817773-38817792 None:intergenic 50.0%
GGAGCCCACTTTGGACATTT+AGG - chr8_2:38817842-38817861 None:intergenic 50.0%
! AAATGTCCAAAGTGGGCTCC+TGG + chr8_2:38817842-38817861 Msa1246830:CDS 50.0%
TTATGACCAGGAGCCCACTT+TGG - chr8_2:38817851-38817870 None:intergenic 50.0%
!! TGCAGTTCTGGGACATCTGG+AGG + chr8_2:38816027-38816046 Msa1246830:CDS 55.0%
GGCCTAGCTACAATTCCACC+AGG - chr8_2:38816204-38816223 None:intergenic 55.0%
TCGGACACGGTTGCATCGAA+TGG - chr8_2:38817479-38817498 None:intergenic 55.0%
GGGCTCCTGGTCATAAGCAA+TGG + chr8_2:38817855-38817874 Msa1246830:CDS 55.0%
!! TGCAGTTCTGGGACATCTGG+AGG + chr8_2:38816027-38816046 Msa1246830:CDS 55.0%
GGCCTAGCTACAATTCCACC+AGG - chr8_2:38816204-38816223 None:intergenic 55.0%
TCGGACACGGTTGCATCGAA+TGG - chr8_2:38817479-38817498 None:intergenic 55.0%
GGGCTCCTGGTCATAAGCAA+TGG + chr8_2:38817855-38817874 Msa1246830:CDS 55.0%
! GTATCGACAGGGCCGCGTCT+CGG + chr8_2:38817640-38817659 Msa1246830:CDS 65.0%
! GTATCGACAGGGCCGCGTCT+CGG + chr8_2:38817640-38817659 Msa1246830:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 38815994 38818167 38815994 ID=Msa1246830;Name=Msa1246830
chr8_2 mRNA 38815994 38818167 38815994 ID=Msa1246830-mRNA-1;Parent=Msa1246830;Name=Msa1246830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.5|1|1|1|2|275|517
chr8_2 exon 38815994 38816960 38815994 ID=Msa1246830-mRNA-1:exon:12044;Parent=Msa1246830-mRNA-1
chr8_2 exon 38817306 38818167 38817306 ID=Msa1246830-mRNA-1:exon:12045;Parent=Msa1246830-mRNA-1
chr8_2 CDS 38815994 38816960 38815994 ID=Msa1246830-mRNA-1:cds;Parent=Msa1246830-mRNA-1
chr8_2 CDS 38817306 38817892 38817306 ID=Msa1246830-mRNA-1:cds;Parent=Msa1246830-mRNA-1
chr8_2 three_prime_UTR 38817893 38818167 38817893 ID=Msa1246830-mRNA-1:three_prime_utr;Parent=Msa1246830-mRNA-1
Gene Sequence

>Msa1246830

ATGGGCTGTTTTGTTTTTGTTAAATTTATTTTGTGCAGTTCTGGGACATCTGGAGGTGAGAGAAAGTTGATGCCAACAATTGAAGACGAGTTAGGGAGGAGAAGTTTGTTGTATAGTTTATTGATGCCAGTGATGAGCCAGTTTGTTCCTGGTTTAGAAAAAGGGAAAGGAATGTACCTAATGTTTATAAAATCTGAGGCTAAAACACCTGGTGGAATTGTAGCTAGGCCAGTTTTAACTAGCTATTACAAAAGTTCCTATTTTAGAGATAGACCTTATGACCCTTACACAAACTACACAAGCCCAAATGAAACTGTACTGTGTCCTGATTCATACCAAAGCATGTATTCTCAACTGCTTTGTGGTCTTTGTCAAAACAAAGAGGTTTTAAGGGTTGGTGCTGTATTTGCCTCTGGTTTTATAAGGGCTATTAGGTTCCTTGAGAAACATTGGAACCTTCTTTGCAATGATATTAGAACTGGTACTGTTAACCCTTTAATTACTGACTCAACAGTGAGAGATTCTGTTATGAAGATCCTTAAACCTGATCCTAAACTTGCTGATTTTATCCAAACTGAGTGTAGTAAAAATTCTTGGCAGGGGATAATTACTAGGCTTTGGCCTAATACCAAGTATGTGGATGTTATTGTGACTGGAACAATGTCACAGTATATTCCTATTTTGGATCATTATAGCAATGGTTTACCACTTGTTTGCACTATGTATGCTTCTAGTGAATGTTACTTTGGTGTTAACTTGAACCCTCTTTGTCAACCTTGTGAAGTGTCTTATACTCTTATTCCTACCATGTGCTACTTTGAATTTTTGCCTGTGAATAGAAGTAATGGTGTCACTGATTCTCTTCACACACCTAGATCTCTTAATGAGAAAGAGCAGAAAGAGTTGGTTGAACTTGTTGATGTCAAACTTGGTCATGAATATGAGCTTGTTGTCACTACTTATGCTGGACTATACCGTTACCGAGTTGGTGATGTGTTGAAGGTAGCTGGATTCAAGAACAAAGCACCGCAATTCAACTTCGTGTGCCGAAAAAATGTGGTATTGAGCATTGATTCAGACAAAACTGATGAAGTTGAGCTTCAAAATGCAATGGCAAATGCTATAACACATTTAGTACCATTCGATGCAACCGTGTCCGAATACACTAGCTATGCAGACACAACAACAATTCCAGGTCACTATGTCCTCTACTGGGAACTCACTCTGAACAAATCAACACAAATTCCACCTTGTGTTTTTGAAGATTGCTGCTTAACAATTGAAGAATCACTCAACAGCGTGTATCGACAGGGCCGCGTCTCGGACAAATCTATCGGTCCGCTTGAGATCAAGATTGTTGAACAGGGCACTTTTGATAAGCTAATGGATTATGCCATTAGTTTAGGTGCTTCAATTAATCAGTACAAGACACCAAGGTGTGTGAAGTTTGCACCTGTTGTTGAACTCTTGAACTCAAGGGTAATGTCAAGTTACTTTAGCCCTAAATGTCCAAAGTGGGCTCCTGGTCATAAGCAATGGATCAATCAGAATTAA

Protein sequence

>Msa1246830

MGCFVFVKFILCSSGTSGGERKLMPTIEDELGRRSLLYSLLMPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWNLLCNDIRTGTVNPLITDSTVRDSVMKILKPDPKLADFIQTECSKNSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGVNLNPLCQPCEVSYTLIPTMCYFEFLPVNRSNGVTDSLHTPRSLNEKEQKELVELVDVKLGHEYELVVTTYAGLYRYRVGDVLKVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMANAITHLVPFDATVSEYTSYADTTTIPGHYVLYWELTLNKSTQIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVMSSYFSPKCPKWAPGHKQWINQN*