Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082830 | XP_013469227.1 | 93.237 | 207 | 12 | 1 | 1 | 205 | 1 | 207 | 1.34e-103 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082830 | sp|F6HQ26|RU1C_VITVI | 64.815 | 216 | 62 | 5 | 1 | 205 | 1 | 213 | 1.72e-75 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082830 | A0A072VYW7 | 93.237 | 207 | 12 | 1 | 1 | 205 | 1 | 207 | 6.40e-104 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050520 | Msa0082830 | 0.805244 | 1.465945e-49 | -8.615850e-47 |
| Msa0052350 | Msa0082830 | 0.832776 | 7.795115e-56 | -8.615850e-47 |
| Msa0082830 | Msa0097360 | 0.826802 | 2.221139e-54 | -8.615850e-47 |
| Msa0082830 | Msa0100880 | 0.805069 | 1.594998e-49 | -8.615850e-47 |
| Msa0082830 | Msa0112300 | 0.942439 | 7.173368e-102 | -8.615850e-47 |
| Msa0082830 | Msa0175290 | 0.946117 | 8.503333e-105 | -8.615850e-47 |
| Msa0082830 | Msa0790170 | 0.846385 | 2.245049e-59 | -8.615850e-47 |
| Msa0082830 | Msa0966720 | 0.819856 | 9.322395e-53 | -8.615850e-47 |
| Msa0082830 | Msa1084500 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
| Msa0082830 | Msa1098720 | 0.801505 | 8.725624e-49 | -8.615850e-47 |
| Msa0082830 | Msa1125790 | 0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0082830 | Msa1172130 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0082830 | Msa1418960 | 0.846116 | 2.658545e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082830 | MtrunA17_Chr1g0196141 | 93.237 | 207 | 12 | 1 | 1 | 205 | 1 | 207 | 1.23e-107 | 307 |
| Msa0082830 | MtrunA17_Chr7g0268561 | 67.822 | 202 | 57 | 3 | 1 | 196 | 1 | 200 | 2.98e-68 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082830 | AT4G03120.1 | 62.319 | 138 | 31 | 4 | 1 | 137 | 1 | 118 | 3.15e-44 | 147 |
Find 108 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTGTTGTTGTTGAATA+AGG | 0.184258 | 1_2:+61770967 | None:intergenic |
| TATTTAGCTGACCTGGTATC+TGG | 0.201831 | 1_2:+61768309 | None:intergenic |
| CCTCGACCTTTACCTGTTCC+TGG | 0.225295 | 1_2:-61768862 | Msa0082830:CDS |
| TTGTTGTGTAAATTATTAAA+TGG | 0.248761 | 1_2:-61767730 | Msa0082830:three_prime_UTR |
| TTAGTTGCGTGTAAATTATT+TGG | 0.249582 | 1_2:-61767689 | Msa0082830:three_prime_UTR |
| GTTAGAAAGCAGCATAATTC+TGG | 0.274012 | 1_2:-61769215 | Msa0082830:CDS |
| TCTGAATATGGCCAAATATA+TGG | 0.293240 | 1_2:+61767818 | None:intergenic |
| ATCGCGAAAGTTCCACAGTT+TGG | 0.312398 | 1_2:-61771041 | Msa0082830:five_prime_UTR |
| CCGTTGATCAATTAAACTTT+GGG | 0.329708 | 1_2:+61769044 | None:intergenic |
| GAACATGGTCTCTCTGAATA+TGG | 0.331859 | 1_2:+61767806 | None:intergenic |
| TTCTAATGGTGCTCCCTCTA+TGG | 0.335322 | 1_2:-61768222 | Msa0082830:CDS |
| ACTCGCACAAGCCATATATT+TGG | 0.335520 | 1_2:-61767829 | Msa0082830:three_prime_UTR |
| TCCGTTGATCAATTAAACTT+TGG | 0.357282 | 1_2:+61769043 | None:intergenic |
| TCGCGAAAGTTCCACAGTTT+GGG | 0.362917 | 1_2:-61771040 | Msa0082830:five_prime_UTR |
| GGTGGTGCTGTGGTGCTTCC+AGG | 0.370818 | 1_2:+61768245 | None:intergenic |
| GGCATTGGTGGTTGACCTCC+AGG | 0.381491 | 1_2:+61768904 | None:intergenic |
| AATCCACCGGCACCATCATC+TGG | 0.382484 | 1_2:-61768176 | Msa0082830:CDS |
| ATTTAGCTGACCTGGTATCT+GGG | 0.382496 | 1_2:+61768310 | None:intergenic |
| GAAGAAAACAGGCTATTTGC+AGG | 0.396518 | 1_2:-61768002 | Msa0082830:three_prime_UTR |
| CTCGACCTTTACCTGTTCCT+GGG | 0.409983 | 1_2:-61768861 | Msa0082830:CDS |
| TTGAGCATTGGAATTGGAAT+TGG | 0.414958 | 1_2:+61768139 | None:intergenic |
| TCACCTGGTGCCCCAGGAAC+AGG | 0.415915 | 1_2:+61768850 | None:intergenic |
| TCTCATTTGTTTACTGAATG+AGG | 0.420396 | 1_2:-61767852 | Msa0082830:three_prime_UTR |
| ATCATTTGTGGCATGGTGTT+AGG | 0.420752 | 1_2:+61768350 | None:intergenic |
| AGGTGCTTGAGCATTGGAAT+TGG | 0.425185 | 1_2:+61768133 | None:intergenic |
| GGCAATACAGGATGAAGGTT+TGG | 0.434256 | 1_2:+61768946 | None:intergenic |
| GGAGCGAATGAAGGTGGCCT+TGG | 0.436210 | 1_2:+61768281 | None:intergenic |
| TGCTTCCAGGAACTGTTGGT+GGG | 0.436884 | 1_2:+61768258 | None:intergenic |
| TGTGGGTTATAATAATCTAA+TGG | 0.444341 | 1_2:-61768977 | Msa0082830:CDS |
| GTGCTTCCAGGAACTGTTGG+TGG | 0.445166 | 1_2:+61768257 | None:intergenic |
| TGTGCTTTCAGGCTAATGTA+AGG | 0.448575 | 1_2:-61769098 | Msa0082830:intron |
| CAACGGATCAAAGAACATCT+TGG | 0.452716 | 1_2:-61769027 | Msa0082830:CDS |
| CCAGGTCATTGATTGCTCTC+AGG | 0.456760 | 1_2:+61768113 | None:intergenic |
| CTTCCAGGAACTGTTGGTGG+GGG | 0.460489 | 1_2:+61768260 | None:intergenic |
| GTGGTGCTTCCAGGAACTGT+TGG | 0.469297 | 1_2:+61768254 | None:intergenic |
| CGGTGGATTGGCTTGATACA+TGG | 0.471791 | 1_2:+61768190 | None:intergenic |
| CGAATGAAGGTGGCCTTGGT+AGG | 0.473183 | 1_2:+61768285 | None:intergenic |
| AACGGATCAAAGAACATCTT+GGG | 0.474763 | 1_2:-61769026 | Msa0082830:CDS |
| ATAGAGGGAGCACCATTAGA+AGG | 0.475238 | 1_2:+61768224 | None:intergenic |
| ACCACAGCACCACCTTCTAA+TGG | 0.475930 | 1_2:-61768236 | Msa0082830:CDS |
| CCGTAGCTCAGGAAGAAAAC+AGG | 0.479414 | 1_2:-61768013 | Msa0082830:three_prime_UTR |
| CCAGGTGGAGGCATCATTTG+TGG | 0.479641 | 1_2:+61768338 | None:intergenic |
| GGTGGTTGACCTCCAGGAAT+GGG | 0.482419 | 1_2:+61768910 | None:intergenic |
| CTCCAGGAATGGGAAATCTC+GGG | 0.485227 | 1_2:+61768920 | None:intergenic |
| TTACCTGTTCCTGGGGCACC+AGG | 0.487603 | 1_2:-61768853 | Msa0082830:intron |
| TTCTTCAAATTGCTGATAGT+AGG | 0.492796 | 1_2:+61769074 | None:intergenic |
| GCTCTCAGGTGCTTGAGCAT+TGG | 0.493534 | 1_2:+61768127 | None:intergenic |
| AGATGATGGTGCCGGTGGAT+TGG | 0.502122 | 1_2:+61768178 | None:intergenic |
| TTCTAATAATTTAAAGAACA+TGG | 0.505837 | 1_2:+61767791 | None:intergenic |
| GGCATGAGAGGTCTGAATCC+TGG | 0.508100 | 1_2:+61768883 | None:intergenic |
| TGGTGGTTGACCTCCAGGAA+TGG | 0.511144 | 1_2:+61768909 | None:intergenic |
| ACAGGCTATTTGCAGGGACT+CGG | 0.513648 | 1_2:-61767995 | Msa0082830:three_prime_UTR |
| CATGGCTGATGATGCCATAG+AGG | 0.518907 | 1_2:+61768208 | None:intergenic |
| CCTCCAGGAATGGGAAATCT+CGG | 0.519818 | 1_2:+61768919 | None:intergenic |
| TTTAGCTGACCTGGTATCTG+GGG | 0.521283 | 1_2:+61768311 | None:intergenic |
| GCACCATCATCTGGAGGGTA+TGG | 0.522073 | 1_2:-61768167 | Msa0082830:CDS |
| TGATGAAAGGAGGTTGATGC+AGG | 0.524369 | 1_2:+61771000 | None:intergenic |
| TTATGCTGCTTTCTAACAGA+TGG | 0.527012 | 1_2:+61769221 | None:intergenic |
| GCTTCCAGGAACTGTTGGTG+GGG | 0.536029 | 1_2:+61768259 | None:intergenic |
| GGAGGTCAACCACCAATGCC+AGG | 0.536193 | 1_2:-61768901 | Msa0082830:CDS |
| AAACATTCACCTGGTGCCCC+AGG | 0.539144 | 1_2:+61768844 | None:intergenic |
| CCCAAAGTTTAATTGATCAA+CGG | 0.547338 | 1_2:-61769044 | Msa0082830:CDS |
| GGTGCCCCAGGAACAGGTAA+AGG | 0.553270 | 1_2:+61768856 | None:intergenic |
| TTACCATACCCTCCAGATGA+TGG | 0.555923 | 1_2:+61768164 | None:intergenic |
| GGTAGGGTATTTAGCTGACC+TGG | 0.559827 | 1_2:+61768302 | None:intergenic |
| GGTCTGAATCCTGGCATTGG+TGG | 0.562709 | 1_2:+61768892 | None:intergenic |
| TTAGCTGACCTGGTATCTGG+GGG | 0.565149 | 1_2:+61768312 | None:intergenic |
| GCGTGTAAATTATTTGGCAT+AGG | 0.568882 | 1_2:-61767683 | Msa0082830:three_prime_UTR |
| CCAGGAACAGGTAAAGGTCG+AGG | 0.570796 | 1_2:+61768862 | None:intergenic |
| CCTCCAGATGATGGTGCCGG+TGG | 0.578973 | 1_2:+61768173 | None:intergenic |
| TACCCTCCAGATGATGGTGC+CGG | 0.589060 | 1_2:+61768170 | None:intergenic |
| CACAAGTTAGAAGAAGATGA+AGG | 0.589879 | 1_2:+61770918 | None:intergenic |
| GAATGAAGGTGGCCTTGGTA+GGG | 0.590337 | 1_2:+61768286 | None:intergenic |
| AGGAACTGATCACTGATGAA+AGG | 0.592541 | 1_2:+61770987 | None:intergenic |
| GCACTCAAACAGCCATGCCT+CGG | 0.592680 | 1_2:-61770858 | Msa0082830:intron |
| CCTGAGAGCAATCAATGACC+TGG | 0.596965 | 1_2:-61768113 | Msa0082830:exon |
| TGGAGGCATCATTTGTGGCA+TGG | 0.600454 | 1_2:+61768343 | None:intergenic |
| CCACAAATGATGCCTCCACC+TGG | 0.601830 | 1_2:-61768338 | Msa0082830:CDS |
| GGAAGCAACTTACAGAATCG+TGG | 0.602897 | 1_2:+61770712 | None:intergenic |
| CAACAACAACAATAAGCTGA+AGG | 0.608857 | 1_2:-61770960 | Msa0082830:five_prime_UTR |
| AGAGGTCTGAATCCTGGCAT+TGG | 0.609422 | 1_2:+61768889 | None:intergenic |
| GAAGCAACTTACAGAATCGT+GGG | 0.610854 | 1_2:+61770713 | None:intergenic |
| GGGGTGGCAATACAGGATGA+AGG | 0.612741 | 1_2:+61768941 | None:intergenic |
| TGAGTTGCAGTACCGAGGCA+TGG | 0.613245 | 1_2:+61770846 | None:intergenic |
| TCCAGGAATGGGAAATCTCG+GGG | 0.614934 | 1_2:+61768921 | None:intergenic |
| GAAGAAGATGAAGGATGATG+AGG | 0.619278 | 1_2:+61770927 | None:intergenic |
| ATGGCTGATGATGCCATAGA+GGG | 0.623817 | 1_2:+61768209 | None:intergenic |
| ACCATTAGAAGGTGGTGCTG+TGG | 0.626785 | 1_2:+61768235 | None:intergenic |
| AAGAAAACAGGCTATTTGCA+GGG | 0.627036 | 1_2:-61768001 | Msa0082830:three_prime_UTR |
| CCACCGGCACCATCATCTGG+AGG | 0.638593 | 1_2:-61768173 | Msa0082830:CDS |
| AATTTCATACAAGTTTGACC+AGG | 0.641105 | 1_2:+61768095 | None:intergenic |
| TCGACCTTTACCTGTTCCTG+GGG | 0.642630 | 1_2:-61768860 | Msa0082830:CDS |
| CATGTATCAAGCCAATCCAC+CGG | 0.647787 | 1_2:-61768189 | Msa0082830:CDS |
| TTGTGGCATGGTGTTAGGTG+CGG | 0.648556 | 1_2:+61768355 | None:intergenic |
| CACCGGCACCATCATCTGGA+GGG | 0.651394 | 1_2:-61768172 | Msa0082830:CDS |
| AACTGATCACTGATGAAAGG+AGG | 0.654016 | 1_2:+61770990 | None:intergenic |
| GGCATGGTGTTAGGTGCGGA+AGG | 0.654135 | 1_2:+61768359 | None:intergenic |
| GGTAAAGGTCGAGGCATGAG+AGG | 0.654248 | 1_2:+61768871 | None:intergenic |
| TCATTCAGTAAACAAATGAG+AGG | 0.660707 | 1_2:+61767854 | None:intergenic |
| ATGCGTCTATGCCCAAACTG+TGG | 0.663756 | 1_2:+61771029 | None:intergenic |
| CCGAGATTTCCCATTCCTGG+AGG | 0.676581 | 1_2:-61768919 | Msa0082830:CDS |
| GAGGGAGCACCATTAGAAGG+TGG | 0.677405 | 1_2:+61768227 | None:intergenic |
| TAGCTGACCTGGTATCTGGG+GGG | 0.680021 | 1_2:+61768313 | None:intergenic |
| GTCAGCTAAATACCCTACCA+AGG | 0.684554 | 1_2:-61768298 | Msa0082830:CDS |
| CCAGGAATGGGAAATCTCGG+GGG | 0.691329 | 1_2:+61768922 | None:intergenic |
| AGAACATCTTGGGCAAGCTG+CGG | 0.693174 | 1_2:-61769016 | Msa0082830:CDS |
| TAATTCTGGTTATAAACACA+AGG | 0.696885 | 1_2:-61769201 | Msa0082830:intron |
| ATGGAAAATAGTATCGAACA+AGG | 0.711480 | 1_2:+61768036 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATCAAAATCAAAAT+TGG | - | chr1_2:61768897-61768916 | Msa0082830:CDS | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769163-61769182 | Msa0082830:intron | 100.0% |
| !! | AATGAACTTAAAAAAATGAA+TGG | + | chr1_2:61768129-61768148 | None:intergenic | 15.0% |
| !! | AAAAGATTATTGGAAAAATA+GGG | - | chr1_2:61768360-61768379 | Msa0082830:CDS | 15.0% |
| !!! | ATCTTGAAAGTATAATTTAA+TGG | + | chr1_2:61769982-61770001 | None:intergenic | 15.0% |
| !! | ATATGATAGAATAAATTATC+CGG | + | chr1_2:61770291-61770310 | None:intergenic | 15.0% |
| !! | TTCTAATAATTTAAAGAACA+TGG | + | chr1_2:61770920-61770939 | None:intergenic | 15.0% |
| !! | TTGTTGTGTAAATTATTAAA+TGG | - | chr1_2:61770978-61770997 | Msa0082830:five_prime_UTR | 15.0% |
| !! | AAATGTTATGAAATGAATGA+AGG | + | chr1_2:61767913-61767932 | None:intergenic | 20.0% |
| !! | AAAATATTATCCAACACAAA+AGG | - | chr1_2:61768225-61768244 | Msa0082830:CDS | 20.0% |
| !! | GAAAAGATTATTGGAAAAAT+AGG | - | chr1_2:61768359-61768378 | Msa0082830:CDS | 20.0% |
| !!! | AAATTTTGAACACAACAAAA+CGG | + | chr1_2:61768805-61768824 | None:intergenic | 20.0% |
| !! | AATGAAAGTTGAAATTAGAA+AGG | - | chr1_2:61768970-61768989 | Msa0082830:CDS | 20.0% |
| !! | ATGAAAGTTGAAATTAGAAA+GGG | - | chr1_2:61768971-61768990 | Msa0082830:CDS | 20.0% |
| !! | TACGTATAATATCCATTAAA+CGG | - | chr1_2:61769095-61769114 | Msa0082830:intron | 20.0% |
| !!! | ATAAAAGTGTATTTCAATCT+AGG | - | chr1_2:61769560-61769579 | Msa0082830:intron | 20.0% |
| !! | AACATGATATTCAAACTAAA+AGG | + | chr1_2:61770073-61770092 | None:intergenic | 20.0% |
| !! | TCTATCATATCTAATATAAG+TGG | - | chr1_2:61770301-61770320 | Msa0082830:intron | 20.0% |
| !!! | TAATATAAGTGGTTTTCAAT+TGG | - | chr1_2:61770312-61770331 | Msa0082830:intron | 20.0% |
| !! | CTTATTGTTGTTGTTGAATA+AGG | + | chr1_2:61767744-61767763 | None:intergenic | 25.0% |
| ! | ATGTTGAAATCAAAGTGAAA+GGG | + | chr1_2:61768044-61768063 | None:intergenic | 25.0% |
| ! | TATGTTGAAATCAAAGTGAA+AGG | + | chr1_2:61768045-61768064 | None:intergenic | 25.0% |
| !! | CCAATAATCTTTTCTACTAT+GGG | + | chr1_2:61768353-61768372 | None:intergenic | 25.0% |
| !! | TCCAATAATCTTTTCTACTA+TGG | + | chr1_2:61768354-61768373 | None:intergenic | 25.0% |
| ! | TAATGAGTTAGATTGAAATG+TGG | - | chr1_2:61768516-61768535 | Msa0082830:intron | 25.0% |
| ! | ACCCTTTCAAATAATAAAGT+TGG | - | chr1_2:61768833-61768852 | Msa0082830:intron | 25.0% |
| ! | GCCAACTTTATTATTTGAAA+GGG | + | chr1_2:61768837-61768856 | None:intergenic | 25.0% |
| ! | TTCACATCAATGAATTCATA+CGG | + | chr1_2:61768873-61768892 | None:intergenic | 25.0% |
| ! | CTAATTTCAACTTTCATTTC+TGG | + | chr1_2:61768968-61768987 | None:intergenic | 25.0% |
| ! | TATAATATCCATTAAACGGT+CGG | - | chr1_2:61769099-61769118 | Msa0082830:intron | 25.0% |
| !! | AGAAATTAATCTTTTGTTGC+TGG | + | chr1_2:61769339-61769358 | None:intergenic | 25.0% |
| ! | TGATAAGTGAAAAACTTCTT+CGG | + | chr1_2:61769386-61769405 | None:intergenic | 25.0% |
| !! | TAATTCTGGTTATAAACACA+AGG | - | chr1_2:61769507-61769526 | Msa0082830:intron | 25.0% |
| !! | TGTGGGTTATAATAATCTAA+TGG | - | chr1_2:61769731-61769750 | Msa0082830:intron | 25.0% |
| ! | CAGTCAAATACTTCAATAAT+AGG | + | chr1_2:61769931-61769950 | None:intergenic | 25.0% |
| ! | AATGAAAGCCAAAAATAATG+TGG | + | chr1_2:61770040-61770059 | None:intergenic | 25.0% |
| ! | AAAGGTTACATGTAAAGAAT+AGG | + | chr1_2:61770142-61770161 | None:intergenic | 25.0% |
| !!! | TATGTTTTGGTTTGGTTTTT+TGG | - | chr1_2:61770178-61770197 | Msa0082830:intron | 25.0% |
| !! | TATGTTCGATTTTTATGACT+AGG | - | chr1_2:61770816-61770835 | Msa0082830:intron | 25.0% |
| ! | TTAGTTGCGTGTAAATTATT+TGG | - | chr1_2:61771019-61771038 | Msa0082830:five_prime_UTR | 25.0% |
| AATGAAGGTTTGTGTGATTT+AGG | + | chr1_2:61767898-61767917 | None:intergenic | 30.0% | |
| TCGTATCACATAAAACACTT+AGG | + | chr1_2:61768183-61768202 | None:intergenic | 30.0% | |
| AAAAACATTAGAGACAGAGT+TGG | - | chr1_2:61768320-61768339 | Msa0082830:CDS | 30.0% | |
| AAAACATTAGAGACAGAGTT+GGG | - | chr1_2:61768321-61768340 | Msa0082830:CDS | 30.0% | |
| CCCATAGTAGAAAAGATTAT+TGG | - | chr1_2:61768350-61768369 | Msa0082830:CDS | 30.0% | |
| ATTGGAAAAATAGGGTTACA+TGG | - | chr1_2:61768368-61768387 | Msa0082830:intron | 30.0% | |
| AAAAATAGGGTTACATGGTT+TGG | - | chr1_2:61768373-61768392 | Msa0082830:intron | 30.0% | |
| AAAATAGGGTTACATGGTTT+GGG | - | chr1_2:61768374-61768393 | Msa0082830:intron | 30.0% | |
| GGCCAACTTTATTATTTGAA+AGG | + | chr1_2:61768838-61768857 | None:intergenic | 30.0% | |
| CAAATAATAAAGTTGGCCAA+TGG | - | chr1_2:61768840-61768859 | Msa0082830:intron | 30.0% | |
| AAATCAAAATTGGAAGACTC+TGG | - | chr1_2:61768907-61768926 | Msa0082830:CDS | 30.0% | |
| AAGAACAAACAGAAGTTAGA+CGG | - | chr1_2:61769021-61769040 | Msa0082830:CDS | 30.0% | |
| TTCAAAACCCTTAATTCCAA+TGG | - | chr1_2:61769230-61769249 | Msa0082830:intron | 30.0% | |
| TCTTCGGAAACAATAAGAAA+GGG | + | chr1_2:61769370-61769389 | None:intergenic | 30.0% | |
| TTCTTCGGAAACAATAAGAA+AGG | + | chr1_2:61769371-61769390 | None:intergenic | 30.0% | |
| CAATCTAGGTCATATTTATG+AGG | - | chr1_2:61769574-61769593 | Msa0082830:intron | 30.0% | |
| TGATATGTATTTGTGCTTTC+AGG | - | chr1_2:61769599-61769618 | Msa0082830:intron | 30.0% | |
| TTCTTCAAATTGCTGATAGT+AGG | + | chr1_2:61769637-61769656 | None:intergenic | 30.0% | |
| CCGTTGATCAATTAAACTTT+GGG | + | chr1_2:61769667-61769686 | None:intergenic | 30.0% | |
| CCCAAAGTTTAATTGATCAA+CGG | - | chr1_2:61769664-61769683 | Msa0082830:intron | 30.0% | |
| TCCGTTGATCAATTAAACTT+TGG | + | chr1_2:61769668-61769687 | None:intergenic | 30.0% | |
| CATGATTATGCACATCTTAA+TGG | - | chr1_2:61770010-61770029 | Msa0082830:intron | 30.0% | |
| ! | ATGGCTAACCACATTATTTT+TGG | - | chr1_2:61770029-61770048 | Msa0082830:intron | 30.0% |
| ! | CTATATGTTACTTGTGTCTT+TGG | - | chr1_2:61770093-61770112 | Msa0082830:intron | 30.0% |
| ! | GTTTTCAATTGGAGTTTTCA+GGG | - | chr1_2:61770323-61770342 | Msa0082830:intron | 30.0% |
| AATTTCATACAAGTTTGACC+AGG | + | chr1_2:61770616-61770635 | None:intergenic | 30.0% | |
| ! | ATGGAAAATAGTATCGAACA+AGG | + | chr1_2:61770675-61770694 | None:intergenic | 30.0% |
| TCATTCAGTAAACAAATGAG+AGG | + | chr1_2:61770857-61770876 | None:intergenic | 30.0% | |
| TCTCATTTGTTTACTGAATG+AGG | - | chr1_2:61770856-61770875 | Msa0082830:intron | 30.0% | |
| TCTGAATATGGCCAAATATA+TGG | + | chr1_2:61770893-61770912 | None:intergenic | 30.0% | |
| CAACAACAACAATAAGCTGA+AGG | - | chr1_2:61767748-61767767 | Msa0082830:three_prime_UTR | 35.0% | |
| CACAAGTTAGAAGAAGATGA+AGG | + | chr1_2:61767793-61767812 | None:intergenic | 35.0% | |
| !! | TTTGATTTTGCCCCATAACT+AGG | - | chr1_2:61767817-61767836 | Msa0082830:three_prime_UTR | 35.0% |
| ! | TTGATTTTGCCCCATAACTA+GGG | - | chr1_2:61767818-61767837 | Msa0082830:three_prime_UTR | 35.0% |
| AGCAAAAAACCCTAGTTATG+GGG | + | chr1_2:61767830-61767849 | None:intergenic | 35.0% | |
| CAGCAAAAAACCCTAGTTAT+GGG | + | chr1_2:61767831-61767850 | None:intergenic | 35.0% | |
| TTTGTGTGATTTAGGCTTGA+AGG | + | chr1_2:61767890-61767909 | None:intergenic | 35.0% | |
| ! | TTTCTTCGATTTTGCTTTGC+AGG | - | chr1_2:61767941-61767960 | Msa0082830:three_prime_UTR | 35.0% |
| ACATAATTAGCGATTGGTGA+GGG | + | chr1_2:61768020-61768039 | None:intergenic | 35.0% | |
| AACATAATTAGCGATTGGTG+AGG | + | chr1_2:61768021-61768040 | None:intergenic | 35.0% | |
| AAGGGAACATAATTAGCGAT+TGG | + | chr1_2:61768026-61768045 | None:intergenic | 35.0% | |
| ATGTGCACAACTACATTATG+TGG | - | chr1_2:61768079-61768098 | Msa0082830:three_prime_UTR | 35.0% | |
| !! | AAAGTACTGCTGAAGTTGAA+GGG | - | chr1_2:61768202-61768221 | Msa0082830:CDS | 35.0% |
| ! | CGCTTAATTTCCTTTTGTGT+TGG | + | chr1_2:61768238-61768257 | None:intergenic | 35.0% |
| AAACATTAGAGACAGAGTTG+GGG | - | chr1_2:61768322-61768341 | Msa0082830:CDS | 35.0% | |
| TAGAGAGAAGACTTGTAGTA+AGG | - | chr1_2:61768401-61768420 | Msa0082830:intron | 35.0% | |
| AGTAAGGAGAGTAGATTAGA+TGG | - | chr1_2:61768417-61768436 | Msa0082830:intron | 35.0% | |
| CAAAAGATAACCATGTAGGT+GGG | + | chr1_2:61768640-61768659 | None:intergenic | 35.0% | |
| ACAAAAGATAACCATGTAGG+TGG | + | chr1_2:61768641-61768660 | None:intergenic | 35.0% | |
| ! | ACCTACATGGTTATCTTTTG+TGG | - | chr1_2:61768640-61768659 | Msa0082830:intron | 35.0% |
| ACCACAAAAGATAACCATGT+AGG | + | chr1_2:61768644-61768663 | None:intergenic | 35.0% | |
| !! | CTTTTGTGGTAGCTAGTTTA+AGG | - | chr1_2:61768654-61768673 | Msa0082830:intron | 35.0% |
| CAATGAATTCATACGGTAGA+TGG | + | chr1_2:61768866-61768885 | None:intergenic | 35.0% | |
| GGGATTATGATTCTTGCTTA+TGG | - | chr1_2:61768991-61769010 | Msa0082830:CDS | 35.0% | |
| !!! | TTTTGTGTTTCTGAAGCTTG+AGG | - | chr1_2:61769058-61769077 | Msa0082830:CDS | 35.0% |
| AAACCCTTAATTCCAATGGT+AGG | - | chr1_2:61769234-61769253 | Msa0082830:intron | 35.0% | |
| AACCCTTAATTCCAATGGTA+GGG | - | chr1_2:61769235-61769254 | Msa0082830:intron | 35.0% | |
| TTCCCTACCATTGGAATTAA+GGG | + | chr1_2:61769240-61769259 | None:intergenic | 35.0% | |
| TTTCCCTACCATTGGAATTA+AGG | + | chr1_2:61769241-61769260 | None:intergenic | 35.0% | |
| CTAACATGCACTAGTTGTTT+AGG | + | chr1_2:61769283-61769302 | None:intergenic | 35.0% | |
| !! | TTATGCTGCTTTCTAACAGA+TGG | + | chr1_2:61769490-61769509 | None:intergenic | 35.0% |
| GTTAGAAAGCAGCATAATTC+TGG | - | chr1_2:61769493-61769512 | Msa0082830:intron | 35.0% | |
| AACGGATCAAAGAACATCTT+GGG | - | chr1_2:61769682-61769701 | Msa0082830:intron | 35.0% | |
| TACAAGCGCAACTAAAAGAA+AGG | + | chr1_2:61770160-61770179 | None:intergenic | 35.0% | |
| ! | TTAGTTGCGCTTGTATGTTT+TGG | - | chr1_2:61770165-61770184 | Msa0082830:intron | 35.0% |
| CGGTTTATAATGCTTGAACT+GGG | + | chr1_2:61770271-61770290 | None:intergenic | 35.0% | |
| CCAGTTCAAGCATTATAAAC+CGG | - | chr1_2:61770269-61770288 | Msa0082830:intron | 35.0% | |
| ! | GGTTTTCAATTGGAGTTTTC+AGG | - | chr1_2:61770322-61770341 | Msa0082830:intron | 35.0% |
| !! | TTGAGCATTGGAATTGGAAT+TGG | + | chr1_2:61770572-61770591 | None:intergenic | 35.0% |
| AAGAAAACAGGCTATTTGCA+GGG | - | chr1_2:61770707-61770726 | Msa0082830:intron | 35.0% | |
| GCGTGTAAATTATTTGGCAT+AGG | - | chr1_2:61771025-61771044 | Msa0082830:five_prime_UTR | 35.0% | |
| AACTGATCACTGATGAAAGG+AGG | + | chr1_2:61767721-61767740 | None:intergenic | 40.0% | |
| AGGAACTGATCACTGATGAA+AGG | + | chr1_2:61767724-61767743 | None:intergenic | 40.0% | |
| GAAGAAGATGAAGGATGATG+AGG | + | chr1_2:61767784-61767803 | None:intergenic | 40.0% | |
| GCAGCAAAAAACCCTAGTTA+TGG | + | chr1_2:61767832-61767851 | None:intergenic | 40.0% | |
| GAAGCAACTTACAGAATCGT+GGG | + | chr1_2:61767998-61768017 | None:intergenic | 40.0% | |
| !! | GAAAGTACTGCTGAAGTTGA+AGG | - | chr1_2:61768201-61768220 | Msa0082830:CDS | 40.0% |
| AATTAAGCGTAGCAGAGATG+AGG | - | chr1_2:61768249-61768268 | Msa0082830:CDS | 40.0% | |
| AAGGAGAGTAGATTAGATGG+AGG | - | chr1_2:61768420-61768439 | Msa0082830:intron | 40.0% | |
| GAGGATAGTCACATTACTAG+AGG | - | chr1_2:61768439-61768458 | Msa0082830:intron | 40.0% | |
| ACATTACTAGAGGCAGAGAA+AGG | - | chr1_2:61768449-61768468 | Msa0082830:intron | 40.0% | |
| ! | AAGCCTTATACCACTACATG+GGG | + | chr1_2:61768585-61768604 | None:intergenic | 40.0% |
| ! | CAAGCCTTATACCACTACAT+GGG | + | chr1_2:61768586-61768605 | None:intergenic | 40.0% |
| ! | TCAAGCCTTATACCACTACA+TGG | + | chr1_2:61768587-61768606 | None:intergenic | 40.0% |
| !! | TTTTTGTTTCCTTCCACACC+CGG | - | chr1_2:61768613-61768632 | Msa0082830:intron | 40.0% |
| CGGTGAAATGATGTTCTCTT+GGG | + | chr1_2:61768785-61768804 | None:intergenic | 40.0% | |
| ACGGTGAAATGATGTTCTCT+TGG | + | chr1_2:61768786-61768805 | None:intergenic | 40.0% | |
| ACATGCACTAGTTGTTTAGG+TGG | + | chr1_2:61769280-61769299 | None:intergenic | 40.0% | |
| CATATGCAAGTGTCTAGTTG+TGG | + | chr1_2:61769441-61769460 | None:intergenic | 40.0% | |
| TGTGCTTTCAGGCTAATGTA+AGG | - | chr1_2:61769610-61769629 | Msa0082830:intron | 40.0% | |
| CAACGGATCAAAGAACATCT+TGG | - | chr1_2:61769681-61769700 | Msa0082830:intron | 40.0% | |
| TATAAAAGCCGCGAAAGATG+TGG | + | chr1_2:61769896-61769915 | None:intergenic | 40.0% | |
| !!! | TGCGCTTGTATGTTTTGGTT+TGG | - | chr1_2:61770170-61770189 | Msa0082830:intron | 40.0% |
| ! | CTTTCTTGTGTCGAGAGTTT+TGG | - | chr1_2:61770233-61770252 | Msa0082830:intron | 40.0% |
| !!! | TGTCGAGAGTTTTGGAGAAT+CGG | - | chr1_2:61770241-61770260 | Msa0082830:intron | 40.0% |
| CCGGTTTATAATGCTTGAAC+TGG | + | chr1_2:61770272-61770291 | None:intergenic | 40.0% | |
| ATCATTTGTGGCATGGTGTT+AGG | + | chr1_2:61770361-61770380 | None:intergenic | 40.0% | |
| ATTTAGCTGACCTGGTATCT+GGG | + | chr1_2:61770401-61770420 | None:intergenic | 40.0% | |
| TATTTAGCTGACCTGGTATC+TGG | + | chr1_2:61770402-61770421 | None:intergenic | 40.0% | |
| GAAGAAAACAGGCTATTTGC+AGG | - | chr1_2:61770706-61770725 | Msa0082830:intron | 40.0% | |
| ACTCGCACAAGCCATATATT+TGG | - | chr1_2:61770879-61770898 | Msa0082830:five_prime_UTR | 40.0% | |
| GAACATGGTCTCTCTGAATA+TGG | + | chr1_2:61770905-61770924 | None:intergenic | 40.0% | |
| ATCGCGAAAGTTCCACAGTT+TGG | - | chr1_2:61767667-61767686 | Msa0082830:three_prime_UTR | 45.0% | |
| TCGCGAAAGTTCCACAGTTT+GGG | - | chr1_2:61767668-61767687 | Msa0082830:three_prime_UTR | 45.0% | |
| !! | TGATGAAAGGAGGTTGATGC+AGG | + | chr1_2:61767711-61767730 | None:intergenic | 45.0% |
| GGAAGCAACTTACAGAATCG+TGG | + | chr1_2:61767999-61768018 | None:intergenic | 45.0% | |
| TAGTGATTCCGAACGACAGA+AGG | - | chr1_2:61768157-61768176 | Msa0082830:CDS | 45.0% | |
| TACTAGAGGCAGAGAAAGGA+AGG | - | chr1_2:61768453-61768472 | Msa0082830:intron | 45.0% | |
| TTCATACGGTAGATGGCCAT+TGG | + | chr1_2:61768859-61768878 | None:intergenic | 45.0% | |
| CATTAAACGGTCGGAACCAT+GGG | - | chr1_2:61769108-61769127 | Msa0082830:intron | 45.0% | |
| ATTAAACGGTCGGAACCATG+GGG | - | chr1_2:61769109-61769128 | Msa0082830:intron | 45.0% | |
| ! | GACGGGGATTATGGTGTTTT+GGG | - | chr1_2:61769193-61769212 | Msa0082830:intron | 45.0% |
| GGCAATACAGGATGAAGGTT+TGG | + | chr1_2:61769765-61769784 | None:intergenic | 45.0% | |
| TGGATGGGAAAACATTCACC+TGG | + | chr1_2:61769876-61769895 | None:intergenic | 45.0% | |
| TTTCCCATCCACATCTTTCG+CGG | - | chr1_2:61769885-61769904 | Msa0082830:intron | 45.0% | |
| !!! | GTCGAGAGTTTTGGAGAATC+GGG | - | chr1_2:61770242-61770261 | Msa0082830:intron | 45.0% |
| TTTAGCTGACCTGGTATCTG+GGG | + | chr1_2:61770400-61770419 | None:intergenic | 45.0% | |
| GTCAGCTAAATACCCTACCA+AGG | - | chr1_2:61770410-61770429 | Msa0082830:intron | 45.0% | |
| !! | ATAGAGGGAGCACCATTAGA+AGG | + | chr1_2:61770487-61770506 | None:intergenic | 45.0% |
| TTCTAATGGTGCTCCCTCTA+TGG | - | chr1_2:61770486-61770505 | Msa0082830:intron | 45.0% | |
| ! | ATGGCTGATGATGCCATAGA+GGG | + | chr1_2:61770502-61770521 | None:intergenic | 45.0% |
| CATGTATCAAGCCAATCCAC+CGG | - | chr1_2:61770519-61770538 | Msa0082830:intron | 45.0% | |
| TTACCATACCCTCCAGATGA+TGG | + | chr1_2:61770547-61770566 | None:intergenic | 45.0% | |
| !! | AGGTGCTTGAGCATTGGAAT+TGG | + | chr1_2:61770578-61770597 | None:intergenic | 45.0% |
| ! | CTATTTTCCATCCGTAGCTC+AGG | - | chr1_2:61770684-61770703 | Msa0082830:intron | 45.0% |
| ! | TTTTCTTCCTGAGCTACGGA+TGG | + | chr1_2:61770694-61770713 | None:intergenic | 45.0% |
| ! | CCTGTTTTCTTCCTGAGCTA+CGG | + | chr1_2:61770698-61770717 | None:intergenic | 45.0% |
| ATGCGTCTATGCCCAAACTG+TGG | + | chr1_2:61767682-61767701 | None:intergenic | 50.0% | |
| CACTTAGGCCTTCTGTCGTT+CGG | + | chr1_2:61768168-61768187 | None:intergenic | 50.0% | |
| CAGAGATGAGGTTGTTGCGT+GGG | - | chr1_2:61768261-61768280 | Msa0082830:CDS | 50.0% | |
| ACTACATGGGGTCGACTACA+TGG | + | chr1_2:61768573-61768592 | None:intergenic | 50.0% | |
| ATGTAGTCGACCCCATGTAG+TGG | - | chr1_2:61768572-61768591 | Msa0082830:intron | 50.0% | |
| CGACCCCATGTAGTGGTATA+AGG | - | chr1_2:61768579-61768598 | Msa0082830:intron | 50.0% | |
| ATAACCATGTAGGTGGGACC+GGG | + | chr1_2:61768634-61768653 | None:intergenic | 50.0% | |
| GATAACCATGTAGGTGGGAC+CGG | + | chr1_2:61768635-61768654 | None:intergenic | 50.0% | |
| CCATGGTTCCGACCGTTTAA+TGG | + | chr1_2:61769110-61769129 | None:intergenic | 50.0% | |
| CCATTAAACGGTCGGAACCA+TGG | - | chr1_2:61769107-61769126 | Msa0082830:intron | 50.0% | |
| AGAGAGTGACTAGGAGGGAA+GGG | - | chr1_2:61769143-61769162 | Msa0082830:intron | 50.0% | |
| ! | GGACGGGGATTATGGTGTTT+TGG | - | chr1_2:61769192-61769211 | Msa0082830:intron | 50.0% |
| GCACAGCATTTCCCTACCAT+TGG | + | chr1_2:61769249-61769268 | None:intergenic | 50.0% | |
| AGAACATCTTGGGCAAGCTG+CGG | - | chr1_2:61769692-61769711 | Msa0082830:intron | 50.0% | |
| !!! | GCTTTTCAGCAGGTTGGTGT+GGG | - | chr1_2:61769714-61769733 | Msa0082830:intron | 50.0% |
| TCCAGGAATGGGAAATCTCG+GGG | + | chr1_2:61769790-61769809 | None:intergenic | 50.0% | |
| CTCCAGGAATGGGAAATCTC+GGG | + | chr1_2:61769791-61769810 | None:intergenic | 50.0% | |
| CCTCCAGGAATGGGAAATCT+CGG | + | chr1_2:61769792-61769811 | None:intergenic | 50.0% | |
| AGAGGTCTGAATCCTGGCAT+TGG | + | chr1_2:61769822-61769841 | None:intergenic | 50.0% | |
| CTCGACCTTTACCTGTTCCT+GGG | - | chr1_2:61769847-61769866 | Msa0082830:intron | 50.0% | |
| TCGACCTTTACCTGTTCCTG+GGG | - | chr1_2:61769848-61769867 | Msa0082830:intron | 50.0% | |
| AAGCCGCGAAAGATGTGGAT+GGG | + | chr1_2:61769891-61769910 | None:intergenic | 50.0% | |
| AAAGCCGCGAAAGATGTGGA+TGG | + | chr1_2:61769892-61769911 | None:intergenic | 50.0% | |
| ! | TTGTGGCATGGTGTTAGGTG+CGG | + | chr1_2:61770356-61770375 | None:intergenic | 50.0% |
| !! | TGGAGGCATCATTTGTGGCA+TGG | + | chr1_2:61770368-61770387 | None:intergenic | 50.0% |
| TTAGCTGACCTGGTATCTGG+GGG | + | chr1_2:61770399-61770418 | None:intergenic | 50.0% | |
| ! | GGTAGGGTATTTAGCTGACC+TGG | + | chr1_2:61770409-61770428 | None:intergenic | 50.0% |
| ! | GAATGAAGGTGGCCTTGGTA+GGG | + | chr1_2:61770425-61770444 | None:intergenic | 50.0% |
| TGCTTCCAGGAACTGTTGGT+GGG | + | chr1_2:61770453-61770472 | None:intergenic | 50.0% | |
| ACCACAGCACCACCTTCTAA+TGG | - | chr1_2:61770472-61770491 | Msa0082830:intron | 50.0% | |
| ! | ACCATTAGAAGGTGGTGCTG+TGG | + | chr1_2:61770476-61770495 | None:intergenic | 50.0% |
| ! | CATGGCTGATGATGCCATAG+AGG | + | chr1_2:61770503-61770522 | None:intergenic | 50.0% |
| !! | CGGTGGATTGGCTTGATACA+TGG | + | chr1_2:61770521-61770540 | None:intergenic | 50.0% |
| ! | CCAGGTCATTGATTGCTCTC+AGG | + | chr1_2:61770598-61770617 | None:intergenic | 50.0% |
| CCTGAGAGCAATCAATGACC+TGG | - | chr1_2:61770595-61770614 | Msa0082830:intron | 50.0% | |
| CCGTAGCTCAGGAAGAAAAC+AGG | - | chr1_2:61770695-61770714 | Msa0082830:intron | 50.0% | |
| ACAGGCTATTTGCAGGGACT+CGG | - | chr1_2:61770713-61770732 | Msa0082830:intron | 50.0% | |
| GCACTCAAACAGCCATGCCT+CGG | - | chr1_2:61767850-61767869 | Msa0082830:three_prime_UTR | 55.0% | |
| ! | TGAGTTGCAGTACCGAGGCA+TGG | + | chr1_2:61767865-61767884 | None:intergenic | 55.0% |
| AGGAGTGAGTTGCAGTACCG+AGG | + | chr1_2:61767870-61767889 | None:intergenic | 55.0% | |
| GCAGAGATGAGGTTGTTGCG+TGG | - | chr1_2:61768260-61768279 | Msa0082830:CDS | 55.0% | |
| AGGTTGTTGCGTGGGATGTG+TGG | - | chr1_2:61768269-61768288 | Msa0082830:CDS | 55.0% | |
| TTGCGTGGGATGTGTGGCAA+GGG | - | chr1_2:61768275-61768294 | Msa0082830:CDS | 55.0% | |
| TGGGGTCGACTACATGGATC+AGG | + | chr1_2:61768567-61768586 | None:intergenic | 55.0% | |
| TAGTCACTCTCTCCCCACCA+TGG | + | chr1_2:61769135-61769154 | None:intergenic | 55.0% | |
| ! | ATGGTGGGGAGAGAGTGACT+AGG | - | chr1_2:61769134-61769153 | Msa0082830:intron | 55.0% |
| TGGGGAGAGAGTGACTAGGA+GGG | - | chr1_2:61769138-61769157 | Msa0082830:intron | 55.0% | |
| GAGAGAGTGACTAGGAGGGA+AGG | - | chr1_2:61769142-61769161 | Msa0082830:intron | 55.0% | |
| GAGAGTGACTAGGAGGGAAG+GGG | - | chr1_2:61769144-61769163 | Msa0082830:intron | 55.0% | |
| AGAGTGACTAGGAGGGAAGG+GGG | - | chr1_2:61769145-61769164 | Msa0082830:intron | 55.0% | |
| TGGTAGGGAAATGCTGTGCG+CGG | - | chr1_2:61769250-61769269 | Msa0082830:intron | 55.0% | |
| !!! | GGCTTTTCAGCAGGTTGGTG+TGG | - | chr1_2:61769713-61769732 | Msa0082830:intron | 55.0% |
| GGGGTGGCAATACAGGATGA+AGG | + | chr1_2:61769770-61769789 | None:intergenic | 55.0% | |
| AATCTCGGGGGTGGCAATAC+AGG | + | chr1_2:61769777-61769796 | None:intergenic | 55.0% | |
| CCAGGAATGGGAAATCTCGG+GGG | + | chr1_2:61769789-61769808 | None:intergenic | 55.0% | |
| CCGAGATTTCCCATTCCTGG+AGG | - | chr1_2:61769789-61769808 | Msa0082830:intron | 55.0% | |
| GGTGGTTGACCTCCAGGAAT+GGG | + | chr1_2:61769801-61769820 | None:intergenic | 55.0% | |
| TGGTGGTTGACCTCCAGGAA+TGG | + | chr1_2:61769802-61769821 | None:intergenic | 55.0% | |
| ! | GGTCTGAATCCTGGCATTGG+TGG | + | chr1_2:61769819-61769838 | None:intergenic | 55.0% |
| GGCATGAGAGGTCTGAATCC+TGG | + | chr1_2:61769828-61769847 | None:intergenic | 55.0% | |
| GGTAAAGGTCGAGGCATGAG+AGG | + | chr1_2:61769840-61769859 | None:intergenic | 55.0% | |
| CCAGGAACAGGTAAAGGTCG+AGG | + | chr1_2:61769849-61769868 | None:intergenic | 55.0% | |
| CCTCGACCTTTACCTGTTCC+TGG | - | chr1_2:61769846-61769865 | Msa0082830:intron | 55.0% | |
| AAACATTCACCTGGTGCCCC+AGG | + | chr1_2:61769867-61769886 | None:intergenic | 55.0% | |
| !! | CCAGGTGGAGGCATCATTTG+TGG | + | chr1_2:61770373-61770392 | None:intergenic | 55.0% |
| CCACAAATGATGCCTCCACC+TGG | - | chr1_2:61770370-61770389 | Msa0082830:intron | 55.0% | |
| TAGCTGACCTGGTATCTGGG+GGG | + | chr1_2:61770398-61770417 | None:intergenic | 55.0% | |
| ! | CGAATGAAGGTGGCCTTGGT+AGG | + | chr1_2:61770426-61770445 | None:intergenic | 55.0% |
| ! | CTTCCAGGAACTGTTGGTGG+GGG | + | chr1_2:61770451-61770470 | None:intergenic | 55.0% |
| GCTTCCAGGAACTGTTGGTG+GGG | + | chr1_2:61770452-61770471 | None:intergenic | 55.0% | |
| GTGCTTCCAGGAACTGTTGG+TGG | + | chr1_2:61770454-61770473 | None:intergenic | 55.0% | |
| GTGGTGCTTCCAGGAACTGT+TGG | + | chr1_2:61770457-61770476 | None:intergenic | 55.0% | |
| !! | GAGGGAGCACCATTAGAAGG+TGG | + | chr1_2:61770484-61770503 | None:intergenic | 55.0% |
| !! | AGATGATGGTGCCGGTGGAT+TGG | + | chr1_2:61770533-61770552 | None:intergenic | 55.0% |
| AATCCACCGGCACCATCATC+TGG | - | chr1_2:61770532-61770551 | Msa0082830:intron | 55.0% | |
| ! | TACCCTCCAGATGATGGTGC+CGG | + | chr1_2:61770541-61770560 | None:intergenic | 55.0% |
| GCACCATCATCTGGAGGGTA+TGG | - | chr1_2:61770541-61770560 | Msa0082830:intron | 55.0% | |
| GCTCTCAGGTGCTTGAGCAT+TGG | + | chr1_2:61770584-61770603 | None:intergenic | 55.0% | |
| GTTGCGTGGGATGTGTGGCA+AGG | - | chr1_2:61768274-61768293 | Msa0082830:CDS | 60.0% | |
| GTGGGGAGAGAGTGACTAGG+AGG | - | chr1_2:61769137-61769156 | Msa0082830:intron | 60.0% | |
| GAGTGACTAGGAGGGAAGGG+GGG | - | chr1_2:61769146-61769165 | Msa0082830:intron | 60.0% | |
| AGTGACTAGGAGGGAAGGGG+GGG | - | chr1_2:61769147-61769166 | Msa0082830:intron | 60.0% | |
| ! | GCAAGCTGCGGCTTTTCAGC+AGG | - | chr1_2:61769704-61769723 | Msa0082830:intron | 60.0% |
| ! | GCTGCGGCTTTTCAGCAGGT+TGG | - | chr1_2:61769708-61769727 | Msa0082830:intron | 60.0% |
| GGAATGGGAAATCTCGGGGG+TGG | + | chr1_2:61769786-61769805 | None:intergenic | 60.0% | |
| CCCCCGAGATTTCCCATTCC+TGG | - | chr1_2:61769786-61769805 | Msa0082830:intron | 60.0% | |
| !! | GGCATTGGTGGTTGACCTCC+AGG | + | chr1_2:61769807-61769826 | None:intergenic | 60.0% |
| GGAGGTCAACCACCAATGCC+AGG | - | chr1_2:61769807-61769826 | Msa0082830:intron | 60.0% | |
| GGTGCCCCAGGAACAGGTAA+AGG | + | chr1_2:61769855-61769874 | None:intergenic | 60.0% | |
| ! | TTACCTGTTCCTGGGGCACC+AGG | - | chr1_2:61769855-61769874 | Msa0082830:intron | 60.0% |
| ! | GGCATGGTGTTAGGTGCGGA+AGG | + | chr1_2:61770352-61770371 | None:intergenic | 60.0% |
| GGAGCGAATGAAGGTGGCCT+TGG | + | chr1_2:61770430-61770449 | None:intergenic | 60.0% | |
| ! | GTTGGTGGGGGAGCGAATGA+AGG | + | chr1_2:61770439-61770458 | None:intergenic | 60.0% |
| CACCGGCACCATCATCTGGA+GGG | - | chr1_2:61770536-61770555 | Msa0082830:intron | 60.0% | |
| TAGGTGGGACCGGGTGTGGA+AGG | + | chr1_2:61768625-61768644 | None:intergenic | 65.0% | |
| CATGTAGGTGGGACCGGGTG+TGG | + | chr1_2:61768629-61768648 | None:intergenic | 65.0% | |
| CACACCCGGTCCCACCTACA+TGG | - | chr1_2:61768627-61768646 | Msa0082830:intron | 65.0% | |
| TCGGAACCATGGGGCCATGG+TGG | - | chr1_2:61769118-61769137 | Msa0082830:intron | 65.0% | |
| CGGAACCATGGGGCCATGGT+GGG | - | chr1_2:61769119-61769138 | Msa0082830:intron | 65.0% | |
| GGAACCATGGGGCCATGGTG+GGG | - | chr1_2:61769120-61769139 | Msa0082830:intron | 65.0% | |
| GTGACTAGGAGGGAAGGGGG+GGG | - | chr1_2:61769148-61769167 | Msa0082830:intron | 65.0% | |
| TGACTAGGAGGGAAGGGGGG+GGG | - | chr1_2:61769149-61769168 | Msa0082830:intron | 65.0% | |
| TCACCTGGTGCCCCAGGAAC+AGG | + | chr1_2:61769861-61769880 | None:intergenic | 65.0% | |
| GGTGGGGGAGCGAATGAAGG+TGG | + | chr1_2:61770436-61770455 | None:intergenic | 65.0% | |
| GCTCCCCCACCAACAGTTCC+TGG | - | chr1_2:61770445-61770464 | Msa0082830:intron | 65.0% | |
| !! | GGTGGTGCTGTGGTGCTTCC+AGG | + | chr1_2:61770466-61770485 | None:intergenic | 65.0% |
| ! | CCTCCAGATGATGGTGCCGG+TGG | + | chr1_2:61770538-61770557 | None:intergenic | 65.0% |
| CCACCGGCACCATCATCTGG+AGG | - | chr1_2:61770535-61770554 | Msa0082830:intron | 65.0% | |
| CGGTCGGAACCATGGGGCCA+TGG | - | chr1_2:61769115-61769134 | Msa0082830:intron | 70.0% | |
| CTCTCCCCACCATGGCCCCA+TGG | + | chr1_2:61769127-61769146 | None:intergenic | 70.0% | |
| GACTAGGAGGGAAGGGGGGG+GGG | - | chr1_2:61769150-61769169 | Msa0082830:intron | 70.0% | |
| ACTAGGAGGGAAGGGGGGGG+GGG | - | chr1_2:61769151-61769170 | Msa0082830:intron | 70.0% | |
| !! | ATCTGGGGGGCACCAGGTGG+AGG | + | chr1_2:61770385-61770404 | None:intergenic | 70.0% |
| !! | GGTATCTGGGGGGCACCAGG+TGG | + | chr1_2:61770388-61770407 | None:intergenic | 70.0% |
| !! | CCTGGTATCTGGGGGGCACC+AGG | + | chr1_2:61770391-61770410 | None:intergenic | 70.0% |
| CCTGGTGCCCCCCAGATACC+AGG | - | chr1_2:61770388-61770407 | Msa0082830:intron | 70.0% | |
| CTAGGAGGGAAGGGGGGGGG+GGG | - | chr1_2:61769152-61769171 | Msa0082830:intron | 75.0% | |
| TAGGAGGGAAGGGGGGGGGG+GGG | - | chr1_2:61769153-61769172 | Msa0082830:intron | 75.0% | |
| GGGGGGGGGGACGGGGATTA+TGG | - | chr1_2:61769184-61769203 | Msa0082830:intron | 75.0% | |
| ! | AGGAGGGAAGGGGGGGGGGG+GGG | - | chr1_2:61769154-61769173 | Msa0082830:intron | 80.0% |
| ! | GGAGGGAAGGGGGGGGGGGG+GGG | - | chr1_2:61769155-61769174 | Msa0082830:intron | 85.0% |
| ! | GAGGGAAGGGGGGGGGGGGG+GGG | - | chr1_2:61769156-61769175 | Msa0082830:intron | 85.0% |
| ! | AGGGAAGGGGGGGGGGGGGG+GGG | - | chr1_2:61769157-61769176 | Msa0082830:intron | 85.0% |
| ! | GGGAAGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769158-61769177 | Msa0082830:intron | 90.0% |
| ! | GGAAGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769159-61769178 | Msa0082830:intron | 90.0% |
| ! | GAAGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769160-61769179 | Msa0082830:intron | 90.0% |
| ! | AAGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769161-61769180 | Msa0082830:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_2:61769162-61769181 | Msa0082830:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+CGG | - | chr1_2:61769175-61769194 | Msa0082830:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGAC+GGG | - | chr1_2:61769176-61769195 | Msa0082830:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGACG+GGG | - | chr1_2:61769177-61769196 | Msa0082830:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 61767667 | 61771063 | 61767667 | ID=Msa0082830;Name=Msa0082830 |
| chr1_2 | mRNA | 61767667 | 61771063 | 61767667 | ID=Msa0082830-mRNA-1;Parent=Msa0082830;Name=Msa0082830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=197|1|1|1|1|1|5|451|205 |
| chr1_2 | exon | 61767667 | 61768386 | 61767667 | ID=Msa0082830-mRNA-1:exon:20413;Parent=Msa0082830-mRNA-1 |
| chr1_2 | exon | 61768854 | 61769109 | 61768854 | ID=Msa0082830-mRNA-1:exon:20412;Parent=Msa0082830-mRNA-1 |
| chr1_2 | exon | 61769202 | 61769243 | 61769202 | ID=Msa0082830-mRNA-1:exon:20411;Parent=Msa0082830-mRNA-1 |
| chr1_2 | exon | 61770725 | 61770767 | 61770725 | ID=Msa0082830-mRNA-1:exon:20410;Parent=Msa0082830-mRNA-1 |
| chr1_2 | exon | 61770859 | 61771063 | 61770859 | ID=Msa0082830-mRNA-1:exon:20409;Parent=Msa0082830-mRNA-1 |
| chr1_2 | five_prime_UTR | 61770867 | 61771063 | 61770867 | ID=Msa0082830-mRNA-1:five_prime_utr;Parent=Msa0082830-mRNA-1 |
| chr1_2 | CDS | 61770859 | 61770866 | 61770859 | ID=Msa0082830-mRNA-1:cds;Parent=Msa0082830-mRNA-1 |
| chr1_2 | CDS | 61770725 | 61770767 | 61770725 | ID=Msa0082830-mRNA-1:cds;Parent=Msa0082830-mRNA-1 |
| chr1_2 | CDS | 61769202 | 61769243 | 61769202 | ID=Msa0082830-mRNA-1:cds;Parent=Msa0082830-mRNA-1 |
| chr1_2 | CDS | 61768854 | 61769109 | 61768854 | ID=Msa0082830-mRNA-1:cds;Parent=Msa0082830-mRNA-1 |
| chr1_2 | CDS | 61768118 | 61768386 | 61768118 | ID=Msa0082830-mRNA-1:cds;Parent=Msa0082830-mRNA-1 |
| chr1_2 | three_prime_UTR | 61767667 | 61768117 | 61767667 | ID=Msa0082830-mRNA-1:three_prime_utr;Parent=Msa0082830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
