Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084500 | ABN06078.1 | 77.564 | 156 | 23 | 1 | 10 | 165 | 16 | 159 | 7.83e-78 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084500 | sp|Q6NLG7|RFA3B_ARATH | 58.491 | 106 | 44 | 0 | 60 | 165 | 1 | 106 | 5.12e-44 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084500 | A2Q2E2 | 77.564 | 156 | 23 | 1 | 10 | 165 | 16 | 159 | 3.74e-78 | 238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa1084500 | -0.816319 | 5.881056e-52 | -8.615850e-47 |
| Msa0010490 | Msa1084500 | -0.800351 | 1.501569e-48 | -8.615850e-47 |
| Msa0020390 | Msa1084500 | -0.822081 | 2.866354e-53 | -8.615850e-47 |
| Msa0033880 | Msa1084500 | -0.807568 | 4.744523e-50 | -8.615850e-47 |
| Msa0036540 | Msa1084500 | -0.823424 | 1.395473e-53 | -8.615850e-47 |
| Msa0050520 | Msa1084500 | 0.811032 | 8.573409e-51 | -8.615850e-47 |
| Msa0052350 | Msa1084500 | 0.832235 | 1.061099e-55 | -8.615850e-47 |
| Msa0057750 | Msa1084500 | -0.801818 | 7.523370e-49 | -8.615850e-47 |
| Msa0082830 | Msa1084500 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
| Msa0095360 | Msa1084500 | -0.800244 | 1.578552e-48 | -8.615850e-47 |
| Msa0097360 | Msa1084500 | 0.800578 | 1.349831e-48 | -8.615850e-47 |
| Msa0100590 | Msa1084500 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0100800 | Msa1084500 | -0.806610 | 7.564858e-50 | -8.615850e-47 |
| Msa0100880 | Msa1084500 | 0.814273 | 1.675646e-51 | -8.615850e-47 |
| Msa0101180 | Msa1084500 | -0.819459 | 1.148441e-52 | -8.615850e-47 |
| Msa0103790 | Msa1084500 | -0.802264 | 6.092634e-49 | -8.615850e-47 |
| Msa0112300 | Msa1084500 | 0.842107 | 3.164409e-58 | -8.615850e-47 |
| Msa0118540 | Msa1084500 | -0.818209 | 2.209046e-52 | -8.615850e-47 |
| Msa0603570 | Msa1084500 | -0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa0609000 | Msa1084500 | -0.805487 | 1.303701e-49 | -8.615850e-47 |
| Msa0615580 | Msa1084500 | -0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0615680 | Msa1084500 | -0.822943 | 1.807727e-53 | -8.615850e-47 |
| Msa0618930 | Msa1084500 | -0.805747 | 1.149939e-49 | -8.615850e-47 |
| Msa0631350 | Msa1084500 | -0.812329 | 4.477635e-51 | -8.615850e-47 |
| Msa0640940 | Msa1084500 | -0.814517 | 1.479668e-51 | -8.615850e-47 |
| Msa0643320 | Msa1084500 | -0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0644030 | Msa1084500 | -0.810444 | 1.149120e-50 | -8.615850e-47 |
| Msa0659790 | Msa1084500 | -0.805250 | 1.461460e-49 | -8.615850e-47 |
| Msa0662630 | Msa1084500 | -0.809470 | 1.862602e-50 | -8.615850e-47 |
| Msa0666230 | Msa1084500 | -0.821370 | 4.186215e-53 | -8.615850e-47 |
| Msa0669720 | Msa1084500 | -0.852502 | 4.427443e-61 | -8.615850e-47 |
| Msa0669760 | Msa1084500 | -0.812904 | 3.352493e-51 | -8.615850e-47 |
| Msa0679360 | Msa1084500 | -0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0683140 | Msa1084500 | -0.823507 | 1.334397e-53 | -8.615850e-47 |
| Msa0683600 | Msa1084500 | -0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0716420 | Msa1084500 | 0.819291 | 1.254799e-52 | -8.615850e-47 |
| Msa0743530 | Msa1084500 | -0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0746210 | Msa1084500 | -0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0751010 | Msa1084500 | -0.834297 | 3.251611e-56 | -8.615850e-47 |
| Msa0758230 | Msa1084500 | -0.804593 | 2.005239e-49 | -8.615850e-47 |
| Msa0790170 | Msa1084500 | 0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0790820 | Msa1084500 | 0.896712 | 2.835123e-76 | -8.615850e-47 |
| Msa0794050 | Msa1084500 | -0.842860 | 1.997613e-58 | -8.615850e-47 |
| Msa0799010 | Msa1084500 | 0.815627 | 8.391668e-52 | -8.615850e-47 |
| Msa0818770 | Msa1084500 | -0.855650 | 5.472190e-62 | -8.615850e-47 |
| Msa0822170 | Msa1084500 | -0.827458 | 1.547110e-54 | -8.615850e-47 |
| Msa0833190 | Msa1084500 | 0.823908 | 1.075210e-53 | -8.615850e-47 |
| Msa0126880 | Msa1084500 | -0.816944 | 4.258268e-52 | -8.615850e-47 |
| Msa0127040 | Msa1084500 | -0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa0166750 | Msa1084500 | -0.815435 | 9.256867e-52 | -8.615850e-47 |
| Msa0167480 | Msa1084500 | -0.815845 | 7.503855e-52 | -8.615850e-47 |
| Msa0174000 | Msa1084500 | -0.810588 | 1.069923e-50 | -8.615850e-47 |
| Msa0175200 | Msa1084500 | -0.807100 | 5.959961e-50 | -8.615850e-47 |
| Msa0175290 | Msa1084500 | 0.846259 | 2.429690e-59 | -8.615850e-47 |
| Msa0183870 | Msa1084500 | -0.813951 | 1.973974e-51 | -8.615850e-47 |
| Msa0188350 | Msa1084500 | -0.810118 | 1.351472e-50 | -8.615850e-47 |
| Msa0190120 | Msa1084500 | -0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0191080 | Msa1084500 | -0.802700 | 4.954154e-49 | -8.615850e-47 |
| Msa0197530 | Msa1084500 | -0.838960 | 2.107665e-57 | -8.615850e-47 |
| Msa0207700 | Msa1084500 | -0.811160 | 8.046041e-51 | -8.615850e-47 |
| Msa0219250 | Msa1084500 | 0.812013 | 5.247559e-51 | -8.615850e-47 |
| Msa0229360 | Msa1084500 | -0.819253 | 1.279913e-52 | -8.615850e-47 |
| Msa0231100 | Msa1084500 | -0.836558 | 8.723266e-57 | -8.615850e-47 |
| Msa0231790 | Msa1084500 | -0.801175 | 1.019403e-48 | -8.615850e-47 |
| Msa0233380 | Msa1084500 | -0.831768 | 1.384212e-55 | -8.615850e-47 |
| Msa0365860 | Msa1084500 | -0.804528 | 2.068660e-49 | -8.615850e-47 |
| Msa0370160 | Msa1084500 | 0.833973 | 3.919280e-56 | -8.615850e-47 |
| Msa0384670 | Msa1084500 | -0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0384880 | Msa1084500 | -0.822000 | 2.993746e-53 | -8.615850e-47 |
| Msa0386040 | Msa1084500 | -0.801376 | 9.270779e-49 | -8.615850e-47 |
| Msa0427860 | Msa1084500 | 0.831515 | 1.598057e-55 | -8.615850e-47 |
| Msa0434770 | Msa1084500 | -0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0436200 | Msa1084500 | -0.835830 | 1.335449e-56 | -8.615850e-47 |
| Msa0436920 | Msa1084500 | 0.853800 | 1.880859e-61 | -8.615850e-47 |
| Msa0437690 | Msa1084500 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0443390 | Msa1084500 | -0.814308 | 1.645852e-51 | -8.615850e-47 |
| Msa0458060 | Msa1084500 | -0.802798 | 4.728381e-49 | -8.615850e-47 |
| Msa0463340 | Msa1084500 | -0.832194 | 1.086523e-55 | -8.615850e-47 |
| Msa0469620 | Msa1084500 | 0.819258 | 1.276536e-52 | -8.615850e-47 |
| Msa0474090 | Msa1084500 | 0.828578 | 8.317538e-55 | -8.615850e-47 |
| Msa0478580 | Msa1084500 | -0.802190 | 6.310240e-49 | -8.615850e-47 |
| Msa0479330 | Msa1084500 | -0.819818 | 9.509636e-53 | -8.615850e-47 |
| Msa1001350 | Msa1084500 | -0.807283 | 5.452671e-50 | -8.615850e-47 |
| Msa1002600 | Msa1084500 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
| Msa1019240 | Msa1084500 | -0.803809 | 2.919331e-49 | -8.615850e-47 |
| Msa1025940 | Msa1084500 | -0.803649 | 3.152268e-49 | -8.615850e-47 |
| Msa1027360 | Msa1084500 | -0.805599 | 1.234991e-49 | -8.615850e-47 |
| Msa1070390 | Msa1084500 | -0.821500 | 3.907271e-53 | -8.615850e-47 |
| Msa1071660 | Msa1084500 | -0.811737 | 6.026580e-51 | -8.615850e-47 |
| Msa1084500 | Msa1120810 | -0.810961 | 8.885960e-51 | -8.615850e-47 |
| Msa1084500 | Msa1122820 | -0.800074 | 1.709388e-48 | -8.615850e-47 |
| Msa1084500 | Msa1125790 | 0.978334 | 1.314841e-145 | -8.615850e-47 |
| Msa1084500 | Msa1128990 | -0.802686 | 4.988010e-49 | -8.615850e-47 |
| Msa1084500 | Msa1131560 | -0.815464 | 9.120502e-52 | -8.615850e-47 |
| Msa1084500 | Msa1132310 | -0.827539 | 1.479730e-54 | -8.615850e-47 |
| Msa1084500 | Msa1133250 | -0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa1084500 | Msa1158770 | -0.809896 | 1.508162e-50 | -8.615850e-47 |
| Msa1084500 | Msa1165780 | -0.839004 | 2.053788e-57 | -8.615850e-47 |
| Msa1084500 | Msa1166870 | -0.839502 | 1.524875e-57 | -8.615850e-47 |
| Msa1084500 | Msa1172130 | 0.807756 | 4.325815e-50 | -8.615850e-47 |
| Msa1084500 | Msa1173900 | -0.815500 | 8.954515e-52 | -8.615850e-47 |
| Msa1084500 | Msa1176980 | -0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa1084500 | Msa1178370 | -0.825910 | 3.621964e-54 | -8.615850e-47 |
| Msa1084500 | Msa1188560 | -0.835219 | 1.905988e-56 | -8.615850e-47 |
| Msa1084500 | Msa1200320 | -0.829171 | 5.975910e-55 | -8.615850e-47 |
| Msa1084500 | Msa1201810 | -0.815009 | 1.151586e-51 | -8.615850e-47 |
| Msa1084500 | Msa1202580 | -0.815456 | 9.158019e-52 | -8.615850e-47 |
| Msa1084500 | Msa1205480 | -0.810303 | 1.232561e-50 | -8.615850e-47 |
| Msa1084500 | Msa1205850 | -0.828066 | 1.104911e-54 | -8.615850e-47 |
| Msa1084500 | Msa1206290 | -0.801826 | 7.497394e-49 | -8.615850e-47 |
| Msa1084500 | Msa1206650 | -0.808881 | 2.490396e-50 | -8.615850e-47 |
| Msa1084500 | Msa1211830 | -0.800374 | 1.485430e-48 | -8.615850e-47 |
| Msa1084500 | Msa1213770 | -0.813358 | 2.665829e-51 | -8.615850e-47 |
| Msa1084500 | Msa1226610 | -0.837055 | 6.511778e-57 | -8.615850e-47 |
| Msa1084500 | Msa1233850 | -0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa1084500 | Msa1253810 | -0.825840 | 3.764623e-54 | -8.615850e-47 |
| Msa1084500 | Msa1256270 | 0.818129 | 2.302265e-52 | -8.615850e-47 |
| Msa1084500 | Msa1262890 | -0.828601 | 8.213295e-55 | -8.615850e-47 |
| Msa1084500 | Msa1270620 | -0.801211 | 1.002053e-48 | -8.615850e-47 |
| Msa1084500 | Msa1276970 | -0.815745 | 7.897124e-52 | -8.615850e-47 |
| Msa1084500 | Msa1296830 | -0.808599 | 2.861337e-50 | -8.615850e-47 |
| Msa1084500 | Msa1297800 | -0.823017 | 1.736582e-53 | -8.615850e-47 |
| Msa1084500 | Msa1299700 | -0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa1084500 | Msa1303580 | -0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa1084500 | Msa1329540 | -0.809345 | 1.981460e-50 | -8.615850e-47 |
| Msa1084500 | Msa1331250 | -0.802209 | 6.254299e-49 | -8.615850e-47 |
| Msa1084500 | Msa1351540 | -0.837449 | 5.163978e-57 | -8.615850e-47 |
| Msa1084500 | Msa1359270 | -0.854404 | 1.258854e-61 | -8.615850e-47 |
| Msa1084500 | Msa1370590 | -0.806158 | 9.421630e-50 | -8.615850e-47 |
| Msa1084500 | Msa1384100 | -0.803895 | 2.802156e-49 | -8.615850e-47 |
| Msa1084500 | Msa1395730 | -0.812687 | 3.739493e-51 | -8.615850e-47 |
| Msa1084500 | Msa1418960 | 0.837826 | 4.133114e-57 | -8.615850e-47 |
| Msa1084500 | Msa1422810 | -0.848327 | 6.579528e-60 | -8.615850e-47 |
| Msa1084500 | Msa1433600 | -0.808369 | 3.204483e-50 | -8.615850e-47 |
| Msa1084500 | Msa1444120 | -0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa1084500 | Msa1447890 | -0.802306 | 5.973772e-49 | -8.615850e-47 |
| Msa1084500 | Msa1454450 | -0.827657 | 1.386301e-54 | -8.615850e-47 |
| Msa1084500 | Msa1454680 | -0.813735 | 2.201894e-51 | -8.615850e-47 |
| Msa1084500 | Msa1454950 | -0.807296 | 5.418252e-50 | -8.615850e-47 |
| Msa1084500 | Msa1458090 | -0.825384 | 4.827899e-54 | -8.615850e-47 |
| Msa1084500 | Msa1459960 | -0.828635 | 8.056076e-55 | -8.615850e-47 |
| Msa1084500 | Msa1460320 | 0.824699 | 7.007608e-54 | -8.615850e-47 |
| Msa1084500 | Msa1462470 | -0.803492 | 3.396572e-49 | -8.615850e-47 |
| Msa0239060 | Msa1084500 | -0.832185 | 1.091860e-55 | -8.615850e-47 |
| Msa0241830 | Msa1084500 | -0.812574 | 3.959202e-51 | -8.615850e-47 |
| Msa0244970 | Msa1084500 | -0.803526 | 3.342630e-49 | -8.615850e-47 |
| Msa0244980 | Msa1084500 | -0.818516 | 1.881914e-52 | -8.615850e-47 |
| Msa0258880 | Msa1084500 | 0.808296 | 3.321498e-50 | -8.615850e-47 |
| Msa0262480 | Msa1084500 | -0.832943 | 7.082765e-56 | -8.615850e-47 |
| Msa0265160 | Msa1084500 | -0.820943 | 5.250701e-53 | -8.615850e-47 |
| Msa0269470 | Msa1084500 | -0.807183 | 5.723245e-50 | -8.615850e-47 |
| Msa0271360 | Msa1084500 | -0.816861 | 4.445743e-52 | -8.615850e-47 |
| Msa0275360 | Msa1084500 | -0.808473 | 3.043943e-50 | -8.615850e-47 |
| Msa0283420 | Msa1084500 | -0.807022 | 6.191131e-50 | -8.615850e-47 |
| Msa0296790 | Msa1084500 | -0.816758 | 4.688810e-52 | -8.615850e-47 |
| Msa0296980 | Msa1084500 | 0.800758 | 1.240345e-48 | -8.615850e-47 |
| Msa0300350 | Msa1084500 | -0.831403 | 1.702891e-55 | -8.615850e-47 |
| Msa0304660 | Msa1084500 | -0.802371 | 5.791108e-49 | -8.615850e-47 |
| Msa0311060 | Msa1084500 | -0.819495 | 1.127293e-52 | -8.615850e-47 |
| Msa0321690 | Msa1084500 | -0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0322900 | Msa1084500 | -0.805376 | 1.375350e-49 | -8.615850e-47 |
| Msa0331700 | Msa1084500 | -0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0335320 | Msa1084500 | 0.820686 | 6.015929e-53 | -8.615850e-47 |
| Msa0482940 | Msa1084500 | -0.804685 | 1.918813e-49 | -8.615850e-47 |
| Msa0505380 | Msa1084500 | -0.800543 | 1.371987e-48 | -8.615850e-47 |
| Msa0509950 | Msa1084500 | 0.812942 | 3.289278e-51 | -8.615850e-47 |
| Msa0511770 | Msa1084500 | -0.818423 | 1.975947e-52 | -8.615850e-47 |
| Msa0524590 | Msa1084500 | -0.838051 | 3.616765e-57 | -8.615850e-47 |
| Msa0534900 | Msa1084500 | -0.808675 | 2.756554e-50 | -8.615850e-47 |
| Msa0540550 | Msa1084500 | -0.819945 | 8.897925e-53 | -8.615850e-47 |
| Msa0547990 | Msa1084500 | -0.810396 | 1.176785e-50 | -8.615850e-47 |
| Msa0550540 | Msa1084500 | -0.818395 | 2.004477e-52 | -8.615850e-47 |
| Msa0550570 | Msa1084500 | -0.822999 | 1.754040e-53 | -8.615850e-47 |
| Msa0593700 | Msa1084500 | -0.806658 | 7.391041e-50 | -8.615850e-47 |
| Msa0600450 | Msa1084500 | -0.802858 | 4.594390e-49 | -8.615850e-47 |
| Msa0602370 | Msa1084500 | -0.831857 | 1.315624e-55 | -8.615850e-47 |
| Msa0879850 | Msa1084500 | -0.824715 | 6.945623e-54 | -8.615850e-47 |
| Msa0892640 | Msa1084500 | -0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0897200 | Msa1084500 | -0.806317 | 8.722409e-50 | -8.615850e-47 |
| Msa0901110 | Msa1084500 | -0.803946 | 2.734611e-49 | -8.615850e-47 |
| Msa0901450 | Msa1084500 | -0.802008 | 6.877370e-49 | -8.615850e-47 |
| Msa0905990 | Msa1084500 | -0.808820 | 2.567091e-50 | -8.615850e-47 |
| Msa0921870 | Msa1084500 | -0.801369 | 9.301123e-49 | -8.615850e-47 |
| Msa0942710 | Msa1084500 | -0.807323 | 5.346839e-50 | -8.615850e-47 |
| Msa0944200 | Msa1084500 | -0.833700 | 4.587269e-56 | -8.615850e-47 |
| Msa0944610 | Msa1084500 | -0.833575 | 4.929566e-56 | -8.615850e-47 |
| Msa0944870 | Msa1084500 | -0.815757 | 7.851313e-52 | -8.615850e-47 |
| Msa0960830 | Msa1084500 | -0.820424 | 6.909544e-53 | -8.615850e-47 |
| Msa0963020 | Msa1084500 | -0.808385 | 3.178422e-50 | -8.615850e-47 |
| Msa0973320 | Msa1084500 | -0.836266 | 1.035198e-56 | -8.615850e-47 |
| Msa0974950 | Msa1084500 | -0.800500 | 1.400218e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084500 | MtrunA17_Chr7g0266481 | 98.113 | 106 | 2 | 0 | 60 | 165 | 1 | 106 | 1.79e-73 | 215 |
| Msa1084500 | MtrunA17_Chr1g0210621 | 54.206 | 107 | 48 | 1 | 60 | 165 | 1 | 107 | 3.08e-37 | 124 |
| Msa1084500 | MtrunA17_Chr1g0210651 | 55.140 | 107 | 47 | 1 | 60 | 165 | 1 | 107 | 1.74e-36 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084500 | AT4G18590.1 | 58.491 | 106 | 44 | 0 | 60 | 165 | 1 | 106 | 5.21e-45 | 144 |
| Msa1084500 | AT3G52630.2 | 55.140 | 107 | 47 | 1 | 60 | 165 | 1 | 107 | 1.65e-40 | 132 |
| Msa1084500 | AT3G52630.1 | 55.140 | 107 | 47 | 1 | 60 | 165 | 1 | 107 | 1.65e-40 | 132 |
Find 44 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCCTTCTTCCGACATAAA+AGG | 0.241109 | 7_2:-84867386 | None:intergenic |
| TCTGTGAACTATCATCTAAA+AGG | 0.263776 | 7_2:-84868191 | None:intergenic |
| ACAAGGACTGCAGGGCTTAA+TGG | 0.275580 | 7_2:-84867346 | None:intergenic |
| GAGAAGCAGTTGATTGTAAA+AGG | 0.288767 | 7_2:+84867469 | Msa1084500:CDS |
| ATGCTGATCACTGCATTAAA+AGG | 0.296057 | 7_2:-84868140 | None:intergenic |
| ACCAACTTTGGTGATGAAAT+TGG | 0.344480 | 7_2:+84867574 | Msa1084500:CDS |
| TTGCAAGCTGACATAGCTTA+TGG | 0.355631 | 7_2:-84867780 | None:intergenic |
| GGTCCATAACTCAGCTTTGA+TGG | 0.369681 | 7_2:-84867554 | None:intergenic |
| AGGAGTACAGTAGAAGGTTC+TGG | 0.374761 | 7_2:+84866376 | Msa1084500:CDS |
| ACAATCAACTGCTTCTCATC+TGG | 0.376539 | 7_2:-84867463 | None:intergenic |
| CTGTGAACTATCATCTAAAA+GGG | 0.380041 | 7_2:-84868190 | None:intergenic |
| GAAGGTTCTGGAAAGGAAAA+AGG | 0.382096 | 7_2:+84866388 | Msa1084500:CDS |
| ATCTGCAAATTGAATCAATC+TGG | 0.421426 | 7_2:+84866480 | Msa1084500:CDS |
| ATTTCAAATGTCTCCTGATT+CGG | 0.429593 | 7_2:-84867153 | None:intergenic |
| ACCAATTTCATCACCAAAGT+TGG | 0.430140 | 7_2:-84867575 | None:intergenic |
| ACAAAGACATCTCTATCATA+TGG | 0.434457 | 7_2:+84867861 | Msa1084500:three_prime_UTR |
| ATGTTGAGAAATAGATTTGT+TGG | 0.434718 | 7_2:+84868085 | Msa1084500:three_prime_UTR |
| ACAAAACTTGTAAGAGGAGC+AGG | 0.439485 | 7_2:-84867499 | None:intergenic |
| ACTTCTACAAAACTTGTAAG+AGG | 0.459678 | 7_2:-84867505 | None:intergenic |
| GCTGAGTTATGGACCAACTT+TGG | 0.463853 | 7_2:+84867562 | Msa1084500:CDS |
| TCTGCATTGACAAGGACTGC+AGG | 0.468536 | 7_2:-84867355 | None:intergenic |
| ACCCTTCTTCCGACATAAAA+GGG | 0.468915 | 7_2:-84867385 | None:intergenic |
| AAGCTATGTCAGCTTGCAAA+TGG | 0.472567 | 7_2:+84867784 | Msa1084500:CDS |
| TCTGACGCTCTAGCTGTCAT+TGG | 0.479697 | 7_2:+84867433 | Msa1084500:CDS |
| GACCAGAGGAGTACAGTAGA+AGG | 0.493178 | 7_2:+84866370 | Msa1084500:CDS |
| AGTCCATCAAAGCTGAGTTA+TGG | 0.498331 | 7_2:+84867551 | Msa1084500:CDS |
| AACCTTCTACTGTACTCCTC+TGG | 0.508205 | 7_2:-84866372 | None:intergenic |
| GAGACATTTGAAATCTGTAC+AGG | 0.519293 | 7_2:+84867162 | Msa1084500:CDS |
| AAGGGTTCGTACAGTGATGC+AGG | 0.527340 | 7_2:+84867402 | Msa1084500:CDS |
| AGGAGACATTACTGTTGTGT+TGG | 0.530242 | 7_2:+84867893 | Msa1084500:three_prime_UTR |
| CAAGCAGATATTATTTACCA+TGG | 0.547450 | 7_2:-84867945 | None:intergenic |
| CTGCATTGACAAGGACTGCA+GGG | 0.550141 | 7_2:-84867354 | None:intergenic |
| AAGCAGATATTATTTACCAT+GGG | 0.598106 | 7_2:-84867944 | None:intergenic |
| ATAAATAGAGGGAGGACCAG+AGG | 0.608531 | 7_2:+84866356 | None:intergenic |
| CAAAACTTGTAAGAGGAGCA+GGG | 0.615820 | 7_2:-84867498 | None:intergenic |
| TACAGTAGAAGGTTCTGGAA+AGG | 0.618140 | 7_2:+84866381 | Msa1084500:CDS |
| CTATCATATGGAATATCTAG+AGG | 0.627927 | 7_2:+84867873 | Msa1084500:three_prime_UTR |
| GAGACGAGAGAGTAGAGCGA+GGG | 0.635654 | 7_2:-84866417 | None:intergenic |
| AAAACTTGTAAGAGGAGCAG+GGG | 0.643901 | 7_2:-84867497 | None:intergenic |
| CTTGCTGTAACTCAACTCAC+AGG | 0.644780 | 7_2:-84867825 | None:intergenic |
| TGTGAACTATCATCTAAAAG+GGG | 0.646431 | 7_2:-84868189 | None:intergenic |
| GCAACAGTTCTGCATTGACA+AGG | 0.657999 | 7_2:-84867363 | None:intergenic |
| CGAGACGAGAGAGTAGAGCG+AGG | 0.669211 | 7_2:-84866418 | None:intergenic |
| AAACTTGTAAGAGGAGCAGG+GGG | 0.714728 | 7_2:-84867496 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAAACAATTTAAACA+AGG | - | chr7_2:84866790-84866809 | None:intergenic | 10.0% |
| !! | ATTAAAATTTAAATGAAATG+TGG | + | chr7_2:84866806-84866825 | Msa1084500:intron | 10.0% |
| !!! | TGAAATCTATAAATTTTTTT+CGG | + | chr7_2:84867977-84867996 | Msa1084500:three_prime_UTR | 10.0% |
| !! | TAATTTAAACAATTTAAACA+AGG | - | chr7_2:84866790-84866809 | None:intergenic | 10.0% |
| !! | ATTAAAATTTAAATGAAATG+TGG | + | chr7_2:84866806-84866825 | Msa1084500:intron | 10.0% |
| !!! | TGAAATCTATAAATTTTTTT+CGG | + | chr7_2:84867977-84867996 | Msa1084500:three_prime_UTR | 10.0% |
| !!! | GAAATCTATAAATTTTTTTC+GGG | + | chr7_2:84867978-84867997 | Msa1084500:three_prime_UTR | 15.0% |
| !!! | AAATCTATAAATTTTTTTCG+GGG | + | chr7_2:84867979-84867998 | Msa1084500:three_prime_UTR | 15.0% |
| !!! | GAAATCTATAAATTTTTTTC+GGG | + | chr7_2:84867978-84867997 | Msa1084500:three_prime_UTR | 15.0% |
| !!! | AAATCTATAAATTTTTTTCG+GGG | + | chr7_2:84867979-84867998 | Msa1084500:three_prime_UTR | 15.0% |
| !!! | CAATTTTCTCAAAATACTAT+CGG | - | chr7_2:84866898-84866917 | None:intergenic | 20.0% |
| !!! | GTTAGTTCTTTTGTATATTT+TGG | + | chr7_2:84867045-84867064 | Msa1084500:intron | 20.0% |
| !!! | AGTGTTTTCCTATAATTTTT+AGG | - | chr7_2:84867095-84867114 | None:intergenic | 20.0% |
| !! | GTAATGATATTTATTCTCTA+TGG | + | chr7_2:84867667-84867686 | Msa1084500:intron | 20.0% |
| !! | TTGAAATTTCACTTATAACA+AGG | - | chr7_2:84867694-84867713 | None:intergenic | 20.0% |
| !!! | CAATTTTCTCAAAATACTAT+CGG | - | chr7_2:84866898-84866917 | None:intergenic | 20.0% |
| !!! | GTTAGTTCTTTTGTATATTT+TGG | + | chr7_2:84867045-84867064 | Msa1084500:intron | 20.0% |
| !!! | AGTGTTTTCCTATAATTTTT+AGG | - | chr7_2:84867095-84867114 | None:intergenic | 20.0% |
| !! | GTAATGATATTTATTCTCTA+TGG | + | chr7_2:84867667-84867686 | Msa1084500:intron | 20.0% |
| !! | TTGAAATTTCACTTATAACA+AGG | - | chr7_2:84867694-84867713 | None:intergenic | 20.0% |
| ! | CAATCATGAACACAAAATTA+GGG | - | chr7_2:84866642-84866661 | None:intergenic | 25.0% |
| ! | TCAATCATGAACACAAAATT+AGG | - | chr7_2:84866643-84866662 | None:intergenic | 25.0% |
| ! | TATTTGTAGATTTGACTGAA+GGG | + | chr7_2:84866728-84866747 | Msa1084500:intron | 25.0% |
| ! | ACTAACTAGATAGGTATAAA+TGG | - | chr7_2:84867031-84867050 | None:intergenic | 25.0% |
| ! | TACAAAAGAACTAACTAGAT+AGG | - | chr7_2:84867040-84867059 | None:intergenic | 25.0% |
| !!! | TTTCCTATAATTTTTAGGAG+CGG | - | chr7_2:84867090-84867109 | None:intergenic | 25.0% |
| !! | CTTAATTTGGAGTCAAAATA+AGG | - | chr7_2:84867292-84867311 | None:intergenic | 25.0% |
| !!! | ACAAGTTTTGTAGAAGTTAT+TGG | + | chr7_2:84867511-84867530 | Msa1084500:CDS | 25.0% |
| !!! | ATATTTTGTTTTTGTTCCCA+TGG | + | chr7_2:84867928-84867947 | Msa1084500:three_prime_UTR | 25.0% |
| ! | AAGCAGATATTATTTACCAT+GGG | - | chr7_2:84867947-84867966 | None:intergenic | 25.0% |
| ! | ATGTTGAGAAATAGATTTGT+TGG | + | chr7_2:84868085-84868104 | Msa1084500:three_prime_UTR | 25.0% |
| !! | ATAGTTCACAGATTGATTTA+TGG | + | chr7_2:84868202-84868221 | Msa1084500:three_prime_UTR | 25.0% |
| !! | TAGTTCACAGATTGATTTAT+GGG | + | chr7_2:84868203-84868222 | Msa1084500:three_prime_UTR | 25.0% |
| ! | CAATCATGAACACAAAATTA+GGG | - | chr7_2:84866642-84866661 | None:intergenic | 25.0% |
| ! | TCAATCATGAACACAAAATT+AGG | - | chr7_2:84866643-84866662 | None:intergenic | 25.0% |
| ! | TATTTGTAGATTTGACTGAA+GGG | + | chr7_2:84866728-84866747 | Msa1084500:intron | 25.0% |
| ! | ACTAACTAGATAGGTATAAA+TGG | - | chr7_2:84867031-84867050 | None:intergenic | 25.0% |
| ! | TACAAAAGAACTAACTAGAT+AGG | - | chr7_2:84867040-84867059 | None:intergenic | 25.0% |
| !!! | TTTCCTATAATTTTTAGGAG+CGG | - | chr7_2:84867090-84867109 | None:intergenic | 25.0% |
| !! | CTTAATTTGGAGTCAAAATA+AGG | - | chr7_2:84867292-84867311 | None:intergenic | 25.0% |
| !!! | ACAAGTTTTGTAGAAGTTAT+TGG | + | chr7_2:84867511-84867530 | Msa1084500:CDS | 25.0% |
| !!! | ATATTTTGTTTTTGTTCCCA+TGG | + | chr7_2:84867928-84867947 | Msa1084500:three_prime_UTR | 25.0% |
| ! | AAGCAGATATTATTTACCAT+GGG | - | chr7_2:84867947-84867966 | None:intergenic | 25.0% |
| ! | ATGTTGAGAAATAGATTTGT+TGG | + | chr7_2:84868085-84868104 | Msa1084500:three_prime_UTR | 25.0% |
| ATCTGCAAATTGAATCAATC+TGG | + | chr7_2:84866480-84866499 | Msa1084500:CDS | 30.0% | |
| AATGAAACGATGAATTGGAA+AGG | - | chr7_2:84866513-84866532 | None:intergenic | 30.0% | |
| TAGAGAATGAAACGATGAAT+TGG | - | chr7_2:84866518-84866537 | None:intergenic | 30.0% | |
| ! | GTGTAAAGAAGCATGAAAAA+TGG | - | chr7_2:84866546-84866565 | None:intergenic | 30.0% |
| ACAGAAAACACAAAAGAACA+CGG | - | chr7_2:84866607-84866626 | None:intergenic | 30.0% | |
| GTATTTGTAGATTTGACTGA+AGG | + | chr7_2:84866727-84866746 | Msa1084500:intron | 30.0% | |
| ! | AATTACAGTTTTACCGAATC+AGG | + | chr7_2:84867140-84867159 | Msa1084500:intron | 30.0% |
| ATTTCAAATGTCTCCTGATT+CGG | - | chr7_2:84867156-84867175 | None:intergenic | 30.0% | |
| GATGCATTATTACATTAAGC+TGG | + | chr7_2:84867200-84867219 | Msa1084500:intron | 30.0% | |
| !! | TAAGGTGAAAAAGGTATTGA+TGG | - | chr7_2:84867274-84867293 | None:intergenic | 30.0% |
| GAGTCAAAATAAGGTGAAAA+AGG | - | chr7_2:84867283-84867302 | None:intergenic | 30.0% | |
| CACAACAAGATGACTTAATT+TGG | - | chr7_2:84867305-84867324 | None:intergenic | 30.0% | |
| ! | TGTGCATATTTTGCAGAATA+TGG | + | chr7_2:84867321-84867340 | Msa1084500:intron | 30.0% |
| ACTTCTACAAAACTTGTAAG+AGG | - | chr7_2:84867508-84867527 | None:intergenic | 30.0% | |
| ! | TTTATTCCCTTTTCTCAAAC+TGG | + | chr7_2:84867605-84867624 | Msa1084500:intron | 30.0% |
| TTTCTAAGCATATTAAGCTG+TGG | + | chr7_2:84867715-84867734 | Msa1084500:intron | 30.0% | |
| TTCTAAGCATATTAAGCTGT+GGG | + | chr7_2:84867716-84867735 | Msa1084500:intron | 30.0% | |
| ACAAAGACATCTCTATCATA+TGG | + | chr7_2:84867861-84867880 | Msa1084500:three_prime_UTR | 30.0% | |
| CTATCATATGGAATATCTAG+AGG | + | chr7_2:84867873-84867892 | Msa1084500:three_prime_UTR | 30.0% | |
| CAAGCAGATATTATTTACCA+TGG | - | chr7_2:84867948-84867967 | None:intergenic | 30.0% | |
| TGTGAACTATCATCTAAAAG+GGG | - | chr7_2:84868192-84868211 | None:intergenic | 30.0% | |
| CTGTGAACTATCATCTAAAA+GGG | - | chr7_2:84868193-84868212 | None:intergenic | 30.0% | |
| TCTGTGAACTATCATCTAAA+AGG | - | chr7_2:84868194-84868213 | None:intergenic | 30.0% | |
| ATCTGCAAATTGAATCAATC+TGG | + | chr7_2:84866480-84866499 | Msa1084500:CDS | 30.0% | |
| AATGAAACGATGAATTGGAA+AGG | - | chr7_2:84866513-84866532 | None:intergenic | 30.0% | |
| TAGAGAATGAAACGATGAAT+TGG | - | chr7_2:84866518-84866537 | None:intergenic | 30.0% | |
| ! | GTGTAAAGAAGCATGAAAAA+TGG | - | chr7_2:84866546-84866565 | None:intergenic | 30.0% |
| ACAGAAAACACAAAAGAACA+CGG | - | chr7_2:84866607-84866626 | None:intergenic | 30.0% | |
| GTATTTGTAGATTTGACTGA+AGG | + | chr7_2:84866727-84866746 | Msa1084500:intron | 30.0% | |
| ! | AATTACAGTTTTACCGAATC+AGG | + | chr7_2:84867140-84867159 | Msa1084500:intron | 30.0% |
| ATTTCAAATGTCTCCTGATT+CGG | - | chr7_2:84867156-84867175 | None:intergenic | 30.0% | |
| GATGCATTATTACATTAAGC+TGG | + | chr7_2:84867200-84867219 | Msa1084500:intron | 30.0% | |
| !! | TAAGGTGAAAAAGGTATTGA+TGG | - | chr7_2:84867274-84867293 | None:intergenic | 30.0% |
| GAGTCAAAATAAGGTGAAAA+AGG | - | chr7_2:84867283-84867302 | None:intergenic | 30.0% | |
| CACAACAAGATGACTTAATT+TGG | - | chr7_2:84867305-84867324 | None:intergenic | 30.0% | |
| ! | TGTGCATATTTTGCAGAATA+TGG | + | chr7_2:84867321-84867340 | Msa1084500:intron | 30.0% |
| ACTTCTACAAAACTTGTAAG+AGG | - | chr7_2:84867508-84867527 | None:intergenic | 30.0% | |
| ! | TTTATTCCCTTTTCTCAAAC+TGG | + | chr7_2:84867605-84867624 | Msa1084500:intron | 30.0% |
| TTTCTAAGCATATTAAGCTG+TGG | + | chr7_2:84867715-84867734 | Msa1084500:intron | 30.0% | |
| TTCTAAGCATATTAAGCTGT+GGG | + | chr7_2:84867716-84867735 | Msa1084500:intron | 30.0% | |
| ACAAAGACATCTCTATCATA+TGG | + | chr7_2:84867861-84867880 | Msa1084500:three_prime_UTR | 30.0% | |
| CTATCATATGGAATATCTAG+AGG | + | chr7_2:84867873-84867892 | Msa1084500:three_prime_UTR | 30.0% | |
| CAAGCAGATATTATTTACCA+TGG | - | chr7_2:84867948-84867967 | None:intergenic | 30.0% | |
| TGTGAACTATCATCTAAAAG+GGG | - | chr7_2:84868192-84868211 | None:intergenic | 30.0% | |
| CTGTGAACTATCATCTAAAA+GGG | - | chr7_2:84868193-84868212 | None:intergenic | 30.0% | |
| TCTGTGAACTATCATCTAAA+AGG | - | chr7_2:84868194-84868213 | None:intergenic | 30.0% | |
| AAATTGCTGAAAAACGAAGC+GGG | - | chr7_2:84866458-84866477 | None:intergenic | 35.0% | |
| CAAATTGCTGAAAAACGAAG+CGG | - | chr7_2:84866459-84866478 | None:intergenic | 35.0% | |
| TTCAAGATACTATCAGACAC+CGG | + | chr7_2:84866958-84866977 | Msa1084500:intron | 35.0% | |
| !! | CTATAATTTTTAGGAGCGGA+AGG | - | chr7_2:84867086-84867105 | None:intergenic | 35.0% |
| CTTCCGCTCCTAAAAATTAT+AGG | + | chr7_2:84867084-84867103 | Msa1084500:intron | 35.0% | |
| ! | GAGACATTTGAAATCTGTAC+AGG | + | chr7_2:84867162-84867181 | Msa1084500:CDS | 35.0% |
| GAGAAGCAGTTGATTGTAAA+AGG | + | chr7_2:84867469-84867488 | Msa1084500:CDS | 35.0% | |
| !! | ACCAACTTTGGTGATGAAAT+TGG | + | chr7_2:84867574-84867593 | Msa1084500:CDS | 35.0% |
| ACCAATTTCATCACCAAAGT+TGG | - | chr7_2:84867578-84867597 | None:intergenic | 35.0% | |
| TGACAACCAGTTTGAGAAAA+GGG | - | chr7_2:84867614-84867633 | None:intergenic | 35.0% | |
| ATGACAACCAGTTTGAGAAA+AGG | - | chr7_2:84867615-84867634 | None:intergenic | 35.0% | |
| ATGCTGATCACTGCATTAAA+AGG | - | chr7_2:84868143-84868162 | None:intergenic | 35.0% | |
| AAATTGCTGAAAAACGAAGC+GGG | - | chr7_2:84866458-84866477 | None:intergenic | 35.0% | |
| CAAATTGCTGAAAAACGAAG+CGG | - | chr7_2:84866459-84866478 | None:intergenic | 35.0% | |
| TTCAAGATACTATCAGACAC+CGG | + | chr7_2:84866958-84866977 | Msa1084500:intron | 35.0% | |
| !! | CTATAATTTTTAGGAGCGGA+AGG | - | chr7_2:84867086-84867105 | None:intergenic | 35.0% |
| CTTCCGCTCCTAAAAATTAT+AGG | + | chr7_2:84867084-84867103 | Msa1084500:intron | 35.0% | |
| ! | GAGACATTTGAAATCTGTAC+AGG | + | chr7_2:84867162-84867181 | Msa1084500:CDS | 35.0% |
| GAGAAGCAGTTGATTGTAAA+AGG | + | chr7_2:84867469-84867488 | Msa1084500:CDS | 35.0% | |
| !! | ACCAACTTTGGTGATGAAAT+TGG | + | chr7_2:84867574-84867593 | Msa1084500:CDS | 35.0% |
| ACCAATTTCATCACCAAAGT+TGG | - | chr7_2:84867578-84867597 | None:intergenic | 35.0% | |
| TGACAACCAGTTTGAGAAAA+GGG | - | chr7_2:84867614-84867633 | None:intergenic | 35.0% | |
| ATGACAACCAGTTTGAGAAA+AGG | - | chr7_2:84867615-84867634 | None:intergenic | 35.0% | |
| ATGCTGATCACTGCATTAAA+AGG | - | chr7_2:84868143-84868162 | None:intergenic | 35.0% | |
| !! | TACAGTAGAAGGTTCTGGAA+AGG | + | chr7_2:84866381-84866400 | Msa1084500:CDS | 40.0% |
| !! | GAAGGTTCTGGAAAGGAAAA+AGG | + | chr7_2:84866388-84866407 | Msa1084500:CDS | 40.0% |
| GGATAGAATACTACGTAGCA+CGG | - | chr7_2:84867010-84867029 | None:intergenic | 40.0% | |
| ! | GAACTGTTGCCCTTTTATGT+CGG | + | chr7_2:84867376-84867395 | Msa1084500:CDS | 40.0% |
| ACCCTTCTTCCGACATAAAA+GGG | - | chr7_2:84867388-84867407 | None:intergenic | 40.0% | |
| AACCCTTCTTCCGACATAAA+AGG | - | chr7_2:84867389-84867408 | None:intergenic | 40.0% | |
| ACAATCAACTGCTTCTCATC+TGG | - | chr7_2:84867466-84867485 | None:intergenic | 40.0% | |
| AAAACTTGTAAGAGGAGCAG+GGG | - | chr7_2:84867500-84867519 | None:intergenic | 40.0% | |
| CAAAACTTGTAAGAGGAGCA+GGG | - | chr7_2:84867501-84867520 | None:intergenic | 40.0% | |
| ACAAAACTTGTAAGAGGAGC+AGG | - | chr7_2:84867502-84867521 | None:intergenic | 40.0% | |
| AGTCCATCAAAGCTGAGTTA+TGG | + | chr7_2:84867551-84867570 | Msa1084500:CDS | 40.0% | |
| TTGCAAGCTGACATAGCTTA+TGG | - | chr7_2:84867783-84867802 | None:intergenic | 40.0% | |
| AAGCTATGTCAGCTTGCAAA+TGG | + | chr7_2:84867784-84867803 | Msa1084500:CDS | 40.0% | |
| AGGAGACATTACTGTTGTGT+TGG | + | chr7_2:84867893-84867912 | Msa1084500:three_prime_UTR | 40.0% | |
| !! | TACAGTAGAAGGTTCTGGAA+AGG | + | chr7_2:84866381-84866400 | Msa1084500:CDS | 40.0% |
| !! | GAAGGTTCTGGAAAGGAAAA+AGG | + | chr7_2:84866388-84866407 | Msa1084500:CDS | 40.0% |
| GGATAGAATACTACGTAGCA+CGG | - | chr7_2:84867010-84867029 | None:intergenic | 40.0% | |
| ! | GAACTGTTGCCCTTTTATGT+CGG | + | chr7_2:84867376-84867395 | Msa1084500:CDS | 40.0% |
| ACCCTTCTTCCGACATAAAA+GGG | - | chr7_2:84867388-84867407 | None:intergenic | 40.0% | |
| AACCCTTCTTCCGACATAAA+AGG | - | chr7_2:84867389-84867408 | None:intergenic | 40.0% | |
| ACAATCAACTGCTTCTCATC+TGG | - | chr7_2:84867466-84867485 | None:intergenic | 40.0% | |
| AAAACTTGTAAGAGGAGCAG+GGG | - | chr7_2:84867500-84867519 | None:intergenic | 40.0% | |
| CAAAACTTGTAAGAGGAGCA+GGG | - | chr7_2:84867501-84867520 | None:intergenic | 40.0% | |
| ACAAAACTTGTAAGAGGAGC+AGG | - | chr7_2:84867502-84867521 | None:intergenic | 40.0% | |
| AGTCCATCAAAGCTGAGTTA+TGG | + | chr7_2:84867551-84867570 | Msa1084500:CDS | 40.0% | |
| TTGCAAGCTGACATAGCTTA+TGG | - | chr7_2:84867783-84867802 | None:intergenic | 40.0% | |
| AAGCTATGTCAGCTTGCAAA+TGG | + | chr7_2:84867784-84867803 | Msa1084500:CDS | 40.0% | |
| AGGAGACATTACTGTTGTGT+TGG | + | chr7_2:84867893-84867912 | Msa1084500:three_prime_UTR | 40.0% | |
| AACCTTCTACTGTACTCCTC+TGG | - | chr7_2:84866375-84866394 | None:intergenic | 45.0% | |
| ! | AGGAGTACAGTAGAAGGTTC+TGG | + | chr7_2:84866376-84866395 | Msa1084500:CDS | 45.0% |
| TGAAAAACGAAGCGGGAGAT+TGG | - | chr7_2:84866451-84866470 | None:intergenic | 45.0% | |
| ACACAAAAGAACACGGAGCA+AGG | - | chr7_2:84866600-84866619 | None:intergenic | 45.0% | |
| ATGTGACATTGTCAGTGCTG+CGG | - | chr7_2:84866870-84866889 | None:intergenic | 45.0% | |
| TAACATGACACTGATGCACG+TGG | - | chr7_2:84866937-84866956 | None:intergenic | 45.0% | |
| CTTCAAATCGAAGGCTTGTC+CGG | - | chr7_2:84866984-84867003 | None:intergenic | 45.0% | |
| GCACGGATACTTCAAATCGA+AGG | - | chr7_2:84866993-84867012 | None:intergenic | 45.0% | |
| ! | GCAACAGTTCTGCATTGACA+AGG | - | chr7_2:84867366-84867385 | None:intergenic | 45.0% |
| ! | TGCCCTTTTATGTCGGAAGA+AGG | + | chr7_2:84867383-84867402 | Msa1084500:CDS | 45.0% |
| ! | GCCCTTTTATGTCGGAAGAA+GGG | + | chr7_2:84867384-84867403 | Msa1084500:CDS | 45.0% |
| AAACTTGTAAGAGGAGCAGG+GGG | - | chr7_2:84867499-84867518 | None:intergenic | 45.0% | |
| ! | GGTCCATAACTCAGCTTTGA+TGG | - | chr7_2:84867557-84867576 | None:intergenic | 45.0% |
| GCTGAGTTATGGACCAACTT+TGG | + | chr7_2:84867562-84867581 | Msa1084500:CDS | 45.0% | |
| ! | CTTGCTGTAACTCAACTCAC+AGG | - | chr7_2:84867828-84867847 | None:intergenic | 45.0% |
| AACCTTCTACTGTACTCCTC+TGG | - | chr7_2:84866375-84866394 | None:intergenic | 45.0% | |
| ! | AGGAGTACAGTAGAAGGTTC+TGG | + | chr7_2:84866376-84866395 | Msa1084500:CDS | 45.0% |
| TGAAAAACGAAGCGGGAGAT+TGG | - | chr7_2:84866451-84866470 | None:intergenic | 45.0% | |
| ACACAAAAGAACACGGAGCA+AGG | - | chr7_2:84866600-84866619 | None:intergenic | 45.0% | |
| ATGTGACATTGTCAGTGCTG+CGG | - | chr7_2:84866870-84866889 | None:intergenic | 45.0% | |
| TAACATGACACTGATGCACG+TGG | - | chr7_2:84866937-84866956 | None:intergenic | 45.0% | |
| CTTCAAATCGAAGGCTTGTC+CGG | - | chr7_2:84866984-84867003 | None:intergenic | 45.0% | |
| GCACGGATACTTCAAATCGA+AGG | - | chr7_2:84866993-84867012 | None:intergenic | 45.0% | |
| ! | GCAACAGTTCTGCATTGACA+AGG | - | chr7_2:84867366-84867385 | None:intergenic | 45.0% |
| ! | TGCCCTTTTATGTCGGAAGA+AGG | + | chr7_2:84867383-84867402 | Msa1084500:CDS | 45.0% |
| ! | GCCCTTTTATGTCGGAAGAA+GGG | + | chr7_2:84867384-84867403 | Msa1084500:CDS | 45.0% |
| AAACTTGTAAGAGGAGCAGG+GGG | - | chr7_2:84867499-84867518 | None:intergenic | 45.0% | |
| ! | GGTCCATAACTCAGCTTTGA+TGG | - | chr7_2:84867557-84867576 | None:intergenic | 45.0% |
| GCTGAGTTATGGACCAACTT+TGG | + | chr7_2:84867562-84867581 | Msa1084500:CDS | 45.0% | |
| ! | CTTGCTGTAACTCAACTCAC+AGG | - | chr7_2:84867828-84867847 | None:intergenic | 45.0% |
| ! | GACCAGAGGAGTACAGTAGA+AGG | + | chr7_2:84866370-84866389 | Msa1084500:CDS | 50.0% |
| AACACGGAGCAAGGAGAAAC+TGG | - | chr7_2:84866591-84866610 | None:intergenic | 50.0% | |
| TGTGACATTGTCAGTGCTGC+GGG | - | chr7_2:84866869-84866888 | None:intergenic | 50.0% | |
| AGATACTATCAGACACCGGC+CGG | + | chr7_2:84866962-84866981 | Msa1084500:intron | 50.0% | |
| ACAAGGACTGCAGGGCTTAA+TGG | - | chr7_2:84867349-84867368 | None:intergenic | 50.0% | |
| ! | CTGCATTGACAAGGACTGCA+GGG | - | chr7_2:84867357-84867376 | None:intergenic | 50.0% |
| ! | TCTGCATTGACAAGGACTGC+AGG | - | chr7_2:84867358-84867377 | None:intergenic | 50.0% |
| AAGGGTTCGTACAGTGATGC+AGG | + | chr7_2:84867402-84867421 | Msa1084500:CDS | 50.0% | |
| TCTGACGCTCTAGCTGTCAT+TGG | + | chr7_2:84867433-84867452 | Msa1084500:CDS | 50.0% | |
| ! | GACCAGAGGAGTACAGTAGA+AGG | + | chr7_2:84866370-84866389 | Msa1084500:CDS | 50.0% |
| AACACGGAGCAAGGAGAAAC+TGG | - | chr7_2:84866591-84866610 | None:intergenic | 50.0% | |
| TGTGACATTGTCAGTGCTGC+GGG | - | chr7_2:84866869-84866888 | None:intergenic | 50.0% | |
| AGATACTATCAGACACCGGC+CGG | + | chr7_2:84866962-84866981 | Msa1084500:intron | 50.0% | |
| ACAAGGACTGCAGGGCTTAA+TGG | - | chr7_2:84867349-84867368 | None:intergenic | 50.0% | |
| ! | CTGCATTGACAAGGACTGCA+GGG | - | chr7_2:84867357-84867376 | None:intergenic | 50.0% |
| ! | TCTGCATTGACAAGGACTGC+AGG | - | chr7_2:84867358-84867377 | None:intergenic | 50.0% |
| AAGGGTTCGTACAGTGATGC+AGG | + | chr7_2:84867402-84867421 | Msa1084500:CDS | 50.0% | |
| TCTGACGCTCTAGCTGTCAT+TGG | + | chr7_2:84867433-84867452 | Msa1084500:CDS | 50.0% | |
| GAGACGAGAGAGTAGAGCGA+GGG | - | chr7_2:84866420-84866439 | None:intergenic | 55.0% | |
| AAATCGAAGGCTTGTCCGGC+CGG | - | chr7_2:84866980-84866999 | None:intergenic | 55.0% | |
| GAGACGAGAGAGTAGAGCGA+GGG | - | chr7_2:84866420-84866439 | None:intergenic | 55.0% | |
| AAATCGAAGGCTTGTCCGGC+CGG | - | chr7_2:84866980-84866999 | None:intergenic | 55.0% | |
| CGAGACGAGAGAGTAGAGCG+AGG | - | chr7_2:84866421-84866440 | None:intergenic | 60.0% | |
| CGAGACGAGAGAGTAGAGCG+AGG | - | chr7_2:84866421-84866440 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84866366 | 84868223 | 84866366 | ID=Msa1084500;Name=Msa1084500 |
| chr7_2 | mRNA | 84866366 | 84868223 | 84866366 | ID=Msa1084500-mRNA-1;Parent=Msa1084500;Name=Msa1084500-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.33|0.5|0.75|0.33|0.25|4|392|165 |
| chr7_2 | exon | 84866366 | 84866501 | 84866366 | ID=Msa1084500-mRNA-1:exon:22772;Parent=Msa1084500-mRNA-1 |
| chr7_2 | exon | 84867148 | 84867185 | 84867148 | ID=Msa1084500-mRNA-1:exon:22773;Parent=Msa1084500-mRNA-1 |
| chr7_2 | exon | 84867337 | 84867595 | 84867337 | ID=Msa1084500-mRNA-1:exon:22774;Parent=Msa1084500-mRNA-1 |
| chr7_2 | exon | 84867767 | 84868223 | 84867767 | ID=Msa1084500-mRNA-1:exon:22775;Parent=Msa1084500-mRNA-1 |
| chr7_2 | CDS | 84866366 | 84866501 | 84866366 | ID=Msa1084500-mRNA-1:cds;Parent=Msa1084500-mRNA-1 |
| chr7_2 | CDS | 84867148 | 84867185 | 84867148 | ID=Msa1084500-mRNA-1:cds;Parent=Msa1084500-mRNA-1 |
| chr7_2 | CDS | 84867337 | 84867595 | 84867337 | ID=Msa1084500-mRNA-1:cds;Parent=Msa1084500-mRNA-1 |
| chr7_2 | CDS | 84867767 | 84867831 | 84867767 | ID=Msa1084500-mRNA-1:cds;Parent=Msa1084500-mRNA-1 |
| chr7_2 | three_prime_UTR | 84867832 | 84868223 | 84867832 | ID=Msa1084500-mRNA-1:three_prime_utr;Parent=Msa1084500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
