AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0790170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790170 MtrunA17_Chr1g0196141 93.720 207 11 1 1 205 1 207 8.22e-108 308
Msa0790170 MtrunA17_Chr7g0268561 68.317 202 56 3 1 196 1 200 1.86e-68 208
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790170 AT4G03120.1 63.043 138 30 4 1 137 1 118 2.13e-44 147

Find 108 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTAGCTGACCTGGTATC+TGG 0.201831 5_3:-803173 None:intergenic
CTTATTGTTGCTGTTGAATA+AGG 0.206410 5_3:-800514 None:intergenic
CCTCGACCTTTACCTGTTCC+TGG 0.225295 5_3:+802620 Msa0790170:CDS
TTGTTGTGTAAATTATTAAA+TGG 0.248761 5_3:+803752 Msa0790170:three_prime_UTR
TTAGTTGCGTGTAAATTATT+TGG 0.249582 5_3:+803793 Msa0790170:three_prime_UTR
GTTAGAAAGCAGCATAATTC+TGG 0.274012 5_3:+802267 Msa0790170:CDS
TCTGAATATGGCCAAATATA+TGG 0.293240 5_3:-803664 None:intergenic
CCGTTGATCAATTAAACTTT+GGG 0.329708 5_3:-802438 None:intergenic
TTCTAATGGTGCTCCCTCTA+TGG 0.335322 5_3:+803260 Msa0790170:CDS
ACTCGCACAAGCCATATATT+TGG 0.335520 5_3:+803653 Msa0790170:three_prime_UTR
GTACATGGTCTCTCTGAATA+TGG 0.340917 5_3:-803676 None:intergenic
TCCGTTGATCAATTAAACTT+TGG 0.357282 5_3:-802439 None:intergenic
GGTGGTGCTGTGGTGCTTCC+AGG 0.370818 5_3:-803237 None:intergenic
GGCATTGGTGGTTGACCTCC+AGG 0.381491 5_3:-802578 None:intergenic
AATCCACCGGCACCATCGTC+TGG 0.381846 5_3:+803306 Msa0790170:CDS
ATTTAGCTGACCTGGTATCT+GGG 0.382496 5_3:-803172 None:intergenic
GAAGAAAACAGGCTATTTGC+AGG 0.396518 5_3:+803480 Msa0790170:three_prime_UTR
CTCGACCTTTACCTGTTCCT+GGG 0.409983 5_3:+802621 Msa0790170:CDS
GGCAATACAGGAGGAAGGTT+TGG 0.410837 5_3:-802536 None:intergenic
TTGAGCATTGGAATTGGAAT+TGG 0.414958 5_3:-803343 None:intergenic
TCACCTGGTGCCCCAGGAAC+AGG 0.415915 5_3:-802632 None:intergenic
TCTCATTTGTTTACTGAATG+AGG 0.420396 5_3:+803630 Msa0790170:three_prime_UTR
ATCATTTGTGGCATGGTGTT+AGG 0.420752 5_3:-803132 None:intergenic
AGGTGCTTGAGCATTGGAAT+TGG 0.425185 5_3:-803349 None:intergenic
TTCTAATAATTTAAAGTACA+TGG 0.431090 5_3:-803691 None:intergenic
GGAGCGAATGAAGGTGGCCT+TGG 0.436210 5_3:-803201 None:intergenic
TGCTTCCAGGAACTGTTGGT+GGG 0.436884 5_3:-803224 None:intergenic
AGACGATGGTGCCGGTGGAT+TGG 0.438952 5_3:-803304 None:intergenic
TGTGGGTTATAATAATCTAA+TGG 0.444341 5_3:+802505 Msa0790170:CDS
GTGCTTCCAGGAACTGTTGG+TGG 0.445166 5_3:-803225 None:intergenic
TGTGCTTTCAGGCTAATGTA+AGG 0.448575 5_3:+802384 Msa0790170:intron
CAACGGATCAAAGAACATCT+TGG 0.452716 5_3:+802455 Msa0790170:CDS
CCAGGTCATTGATTGCTCTC+AGG 0.456760 5_3:-803369 None:intergenic
CTTCCAGGAACTGTTGGTGG+GGG 0.460489 5_3:-803222 None:intergenic
GTGGTGCTTCCAGGAACTGT+TGG 0.469297 5_3:-803228 None:intergenic
CGGTGGATTGGCTTGATACA+TGG 0.471791 5_3:-803292 None:intergenic
CGAATGAAGGTGGCCTTGGT+AGG 0.473183 5_3:-803197 None:intergenic
AACGGATCAAAGAACATCTT+GGG 0.474763 5_3:+802456 Msa0790170:CDS
ATAGAGGGAGCACCATTAGA+AGG 0.475238 5_3:-803258 None:intergenic
ACCACAGCACCACCTTCTAA+TGG 0.475930 5_3:+803246 Msa0790170:CDS
CCGTAGCTCAGGAAGAAAAC+AGG 0.479414 5_3:+803469 Msa0790170:three_prime_UTR
CCAGGTGGAGGCATCATTTG+TGG 0.479641 5_3:-803144 None:intergenic
GGTGGTTGACCTCCAGGAAT+GGG 0.482419 5_3:-802572 None:intergenic
CTCCAGGAATGGGAAATCTC+GGG 0.485227 5_3:-802562 None:intergenic
TTACCTGTTCCTGGGGCACC+AGG 0.487603 5_3:+802629 Msa0790170:CDS
GCACCATCGTCTGGAGGGTA+TGG 0.492060 5_3:+803315 Msa0790170:CDS
TTCTTCAAATTGCTGATAGT+AGG 0.492796 5_3:-802408 None:intergenic
GCTCTCAGGTGCTTGAGCAT+TGG 0.493534 5_3:-803355 None:intergenic
GGCATGAGAGGTCTGAATCC+TGG 0.508100 5_3:-802599 None:intergenic
TGGTGGTTGACCTCCAGGAA+TGG 0.511144 5_3:-802573 None:intergenic
ACAGGCTATTTGCAGGGACT+CGG 0.513648 5_3:+803487 Msa0790170:three_prime_UTR
CATGGCTGATGATGCCATAG+AGG 0.518907 5_3:-803274 None:intergenic
CCTCCAGGAATGGGAAATCT+CGG 0.519818 5_3:-802563 None:intergenic
TTTAGCTGACCTGGTATCTG+GGG 0.521283 5_3:-803171 None:intergenic
TGATGAAAGGAGGTTGATGC+AGG 0.524369 5_3:-800481 None:intergenic
TTATGCTGCTTTCTAACAGA+TGG 0.527012 5_3:-802261 None:intergenic
GCTTCCAGGAACTGTTGGTG+GGG 0.536029 5_3:-803223 None:intergenic
GGAGGTCAACCACCAATGCC+AGG 0.536193 5_3:+802581 Msa0790170:CDS
AAACATTCACCTGGTGCCCC+AGG 0.539144 5_3:-802638 None:intergenic
CCCAAAGTTTAATTGATCAA+CGG 0.547338 5_3:+802438 Msa0790170:CDS
GGTGCCCCAGGAACAGGTAA+AGG 0.553270 5_3:-802626 None:intergenic
GGTAGGGTATTTAGCTGACC+TGG 0.559827 5_3:-803180 None:intergenic
GGTCTGAATCCTGGCATTGG+TGG 0.562709 5_3:-802590 None:intergenic
TACCCTCCAGACGATGGTGC+CGG 0.564878 5_3:-803312 None:intergenic
TTAGCTGACCTGGTATCTGG+GGG 0.565149 5_3:-803170 None:intergenic
GCGTGTAAATTATTTGGCAT+AGG 0.568882 5_3:+803799 Msa0790170:three_prime_UTR
CCAGGAACAGGTAAAGGTCG+AGG 0.570796 5_3:-802620 None:intergenic
CACAAGTTAGAAGAAGATGA+AGG 0.589879 5_3:-800563 None:intergenic
GAATGAAGGTGGCCTTGGTA+GGG 0.590337 5_3:-803196 None:intergenic
CCTCCAGACGATGGTGCCGG+TGG 0.591617 5_3:-803309 None:intergenic
AGGAACTGATCACTGATGAA+AGG 0.592541 5_3:-800494 None:intergenic
GCACTCAAACAGCCATGCCT+CGG 0.592680 5_3:+800623 Msa0790170:exon
CCTGAGAGCAATCAATGACC+TGG 0.596965 5_3:+803369 Msa0790170:exon
TCGCGAAAGTTCCACAGTGT+GGG 0.600021 5_3:+800441 Msa0790170:five_prime_UTR
TGGAGGCATCATTTGTGGCA+TGG 0.600454 5_3:-803139 None:intergenic
CCACAAATGATGCCTCCACC+TGG 0.601830 5_3:+803144 Msa0790170:CDS
GGAAGCAACTTACAGAATCG+TGG 0.602897 5_3:-800769 None:intergenic
CAACAGCAACAATAAGCTGA+AGG 0.605193 5_3:+800521 Msa0790170:five_prime_UTR
CCACCGGCACCATCGTCTGG+AGG 0.606597 5_3:+803309 Msa0790170:CDS
AGAGGTCTGAATCCTGGCAT+TGG 0.609422 5_3:-802593 None:intergenic
GAAGCAACTTACAGAATCGT+GGG 0.610854 5_3:-800768 None:intergenic
CACCGGCACCATCGTCTGGA+GGG 0.612475 5_3:+803310 Msa0790170:CDS
TGAGTTGCAGTACCGAGGCA+TGG 0.613245 5_3:-800635 None:intergenic
ATCGCGAAAGTTCCACAGTG+TGG 0.613820 5_3:+800440 Msa0790170:five_prime_UTR
TCCAGGAATGGGAAATCTCG+GGG 0.614934 5_3:-802561 None:intergenic
GAAGAAGATGAAGGATGATG+AGG 0.619278 5_3:-800554 None:intergenic
ATGGCTGATGATGCCATAGA+GGG 0.623817 5_3:-803273 None:intergenic
ACCATTAGAAGGTGGTGCTG+TGG 0.626785 5_3:-803247 None:intergenic
AAGAAAACAGGCTATTTGCA+GGG 0.627036 5_3:+803481 Msa0790170:three_prime_UTR
AATTTCATACAAGTTTGACC+AGG 0.641105 5_3:-803387 None:intergenic
TCGACCTTTACCTGTTCCTG+GGG 0.642630 5_3:+802622 Msa0790170:CDS
CATGTATCAAGCCAATCCAC+CGG 0.647787 5_3:+803293 Msa0790170:CDS
TTGTGGCATGGTGTTAGGTG+CGG 0.648556 5_3:-803127 None:intergenic
GGGGTGGCAATACAGGAGGA+AGG 0.651955 5_3:-802541 None:intergenic
AACTGATCACTGATGAAAGG+AGG 0.654016 5_3:-800491 None:intergenic
GGCATGGTGTTAGGTGCGGA+AGG 0.654135 5_3:-803123 None:intergenic
GGTAAAGGTCGAGGCATGAG+AGG 0.654248 5_3:-802611 None:intergenic
TCATTCAGTAAACAAATGAG+AGG 0.660707 5_3:-803628 None:intergenic
CCGAGATTTCCCATTCCTGG+AGG 0.676581 5_3:+802563 Msa0790170:CDS
GAGGGAGCACCATTAGAAGG+TGG 0.677405 5_3:-803255 None:intergenic
TAGCTGACCTGGTATCTGGG+GGG 0.680021 5_3:-803169 None:intergenic
GTCAGCTAAATACCCTACCA+AGG 0.684554 5_3:+803184 Msa0790170:CDS
TTACCATACCCTCCAGACGA+TGG 0.690735 5_3:-803318 None:intergenic
CCAGGAATGGGAAATCTCGG+GGG 0.691329 5_3:-802560 None:intergenic
AGAACATCTTGGGCAAGCTG+CGG 0.693174 5_3:+802466 Msa0790170:CDS
TAATTCTGGTTATAAACACA+AGG 0.696885 5_3:+802281 Msa0790170:CDS
ATGGAAAATAGTATCGAACA+AGG 0.711480 5_3:-803446 None:intergenic
ATGCGTCTATGCCCACACTG+TGG 0.713765 5_3:-800452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAATCAAAATCAAAAT+TGG + chr5_3:801677-801696 Msa0790170:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:801946-801965 Msa0790170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:801946-801965 Msa0790170:intron 100.0%
!! AATGAACTTAAAAAAATGAA+TGG - chr5_3:800897-800916 None:intergenic 15.0%
!!! ATCTTGAAAGTATAATTTAA+TGG - chr5_3:802756-802775 None:intergenic 15.0%
!! ATATGATAGAATAAATTATC+CGG - chr5_3:803065-803084 None:intergenic 15.0%
!!! TAATATAAGTTGTTTTCAAT+TGG + chr5_3:803086-803105 Msa0790170:intron 15.0%
!!! TTCTAATAATTTAAAGTACA+TGG - chr5_3:803694-803713 None:intergenic 15.0%
!! TTGTTGTGTAAATTATTAAA+TGG + chr5_3:803752-803771 Msa0790170:three_prime_UTR 15.0%
!! AAATGTTATGAAATGAATGA+AGG - chr5_3:800686-800705 None:intergenic 20.0%
!! AAAATATTATCCAACACAAA+AGG + chr5_3:800993-801012 Msa0790170:intron 20.0%
!! GAAAAGATTATTGGAAAAAT+AGG + chr5_3:801127-801146 Msa0790170:intron 20.0%
!!! AAATTTTGAACACAACAAAA+CGG - chr5_3:801585-801604 None:intergenic 20.0%
!! AATGAAAGTTGAAATTAGAA+AGG + chr5_3:801750-801769 Msa0790170:intron 20.0%
!! ATGAAAGTTGAAATTAGAAA+GGG + chr5_3:801751-801770 Msa0790170:intron 20.0%
!! TACGTATAATATCCATTAAA+CGG + chr5_3:801875-801894 Msa0790170:intron 20.0%
!!! ATAAAAGTGTATTTCAATCT+AGG + chr5_3:802334-802353 Msa0790170:intron 20.0%
!! AACATGATATTCAAACTAAA+AGG - chr5_3:802847-802866 None:intergenic 20.0%
! CTATTGAAATCAAAGTGAAA+GGG - chr5_3:800817-800836 None:intergenic 25.0%
!! CCAATAATCTTTTCTACTAT+GGG - chr5_3:801121-801140 None:intergenic 25.0%
!! TCCAATAATCTTTTCTACTA+TGG - chr5_3:801122-801141 None:intergenic 25.0%
! TAATGAGTTAGATTGAAATG+TGG + chr5_3:801293-801312 Msa0790170:intron 25.0%
! ACCCTTTCAAATAATAAAGT+TGG + chr5_3:801613-801632 Msa0790170:intron 25.0%
! GCCAACTTTATTATTTGAAA+GGG - chr5_3:801617-801636 None:intergenic 25.0%
! TTCACATCAATGAATTCATA+CGG - chr5_3:801653-801672 None:intergenic 25.0%
! CTAATTTCAACTTTCATTTC+TGG - chr5_3:801748-801767 None:intergenic 25.0%
! TATAATATCCATTAAACGGT+CGG + chr5_3:801879-801898 Msa0790170:intron 25.0%
!! AGAAATTAATCTTTTGTTGC+TGG - chr5_3:802115-802134 None:intergenic 25.0%
! TCTTCAGAAACAATAAGAAA+GGG - chr5_3:802146-802165 None:intergenic 25.0%
! TTCTTCAGAAACAATAAGAA+AGG - chr5_3:802147-802166 None:intergenic 25.0%
!! TAATTCTGGTTATAAACACA+AGG + chr5_3:802281-802300 Msa0790170:CDS 25.0%
!! TGTGGGTTATAATAATCTAA+TGG + chr5_3:802505-802524 Msa0790170:CDS 25.0%
! CAGTCAAATACTTCAATAAT+AGG - chr5_3:802705-802724 None:intergenic 25.0%
! AATGAAAGCCAAAAATAATG+TGG - chr5_3:802814-802833 None:intergenic 25.0%
! AAAGGTTACATGTAAAGAAT+AGG - chr5_3:802916-802935 None:intergenic 25.0%
!!! TATGTTTTGGTTTGGTTTTT+TGG + chr5_3:802952-802971 Msa0790170:intron 25.0%
!! TATGTTCGATTTTTATGACT+AGG + chr5_3:803590-803609 Msa0790170:three_prime_UTR 25.0%
! TTAGTTGCGTGTAAATTATT+TGG + chr5_3:803793-803812 Msa0790170:three_prime_UTR 25.0%
! CTTATTGTTGCTGTTGAATA+AGG - chr5_3:800517-800536 None:intergenic 30.0%
AATGAAGGTTTGTGTGATTT+AGG - chr5_3:800671-800690 None:intergenic 30.0%
CCTATTGAAATCAAAGTGAA+AGG - chr5_3:800818-800837 None:intergenic 30.0%
! CCTTTCACTTTGATTTCAAT+AGG + chr5_3:800815-800834 Msa0790170:intron 30.0%
TCGTATCACATAAAACACTT+AGG - chr5_3:800951-800970 None:intergenic 30.0%
AAAAACATTAGAGACAGAGT+TGG + chr5_3:801088-801107 Msa0790170:intron 30.0%
CCCATAGTAGAAAAGATTAT+TGG + chr5_3:801118-801137 Msa0790170:intron 30.0%
ATTGGAAAAATAGGTTTACG+TGG + chr5_3:801136-801155 Msa0790170:intron 30.0%
AAAAATAGGTTTACGTGGTT+TGG + chr5_3:801141-801160 Msa0790170:intron 30.0%
AAAATAGGTTTACGTGGTTT+GGG + chr5_3:801142-801161 Msa0790170:intron 30.0%
! GACTTGTAGATTTTGTAGTA+AGG + chr5_3:801178-801197 Msa0790170:intron 30.0%
GGCCAACTTTATTATTTGAA+AGG - chr5_3:801618-801637 None:intergenic 30.0%
CAAATAATAAAGTTGGCCAA+TGG + chr5_3:801620-801639 Msa0790170:intron 30.0%
AAGAACAAACAGAAGTTAGA+CGG + chr5_3:801801-801820 Msa0790170:intron 30.0%
CAATCTAGGTCATATTTATG+AGG + chr5_3:802348-802367 Msa0790170:intron 30.0%
TGATATGTATTTGTGCTTTC+AGG + chr5_3:802373-802392 Msa0790170:intron 30.0%
TTCTTCAAATTGCTGATAGT+AGG - chr5_3:802411-802430 None:intergenic 30.0%
CCGTTGATCAATTAAACTTT+GGG - chr5_3:802441-802460 None:intergenic 30.0%
CCCAAAGTTTAATTGATCAA+CGG + chr5_3:802438-802457 Msa0790170:CDS 30.0%
TCCGTTGATCAATTAAACTT+TGG - chr5_3:802442-802461 None:intergenic 30.0%
CATGATTATGCACATCTTAA+TGG + chr5_3:802784-802803 Msa0790170:intron 30.0%
! ATGGCTAACCACATTATTTT+TGG + chr5_3:802803-802822 Msa0790170:intron 30.0%
! CTATATGTTACTTGTGTCTT+TGG + chr5_3:802867-802886 Msa0790170:intron 30.0%
! TGTTTTCAATTGGAGTTTTC+AGG + chr5_3:803096-803115 Msa0790170:intron 30.0%
! GTTTTCAATTGGAGTTTTCA+GGG + chr5_3:803097-803116 Msa0790170:intron 30.0%
AATTTCATACAAGTTTGACC+AGG - chr5_3:803390-803409 None:intergenic 30.0%
! ATGGAAAATAGTATCGAACA+AGG - chr5_3:803449-803468 None:intergenic 30.0%
TCATTCAGTAAACAAATGAG+AGG - chr5_3:803631-803650 None:intergenic 30.0%
TCTCATTTGTTTACTGAATG+AGG + chr5_3:803630-803649 Msa0790170:three_prime_UTR 30.0%
TCTGAATATGGCCAAATATA+TGG - chr5_3:803667-803686 None:intergenic 30.0%
CACAAGTTAGAAGAAGATGA+AGG - chr5_3:800566-800585 None:intergenic 35.0%
!! TTTGATTTTGCCCCATAACT+AGG + chr5_3:800590-800609 Msa0790170:five_prime_UTR 35.0%
! TTGATTTTGCCCCATAACTA+GGG + chr5_3:800591-800610 Msa0790170:five_prime_UTR 35.0%
AGCAAAAAACCCTAGTTATG+GGG - chr5_3:800603-800622 None:intergenic 35.0%
CAGCAAAAAACCCTAGTTAT+GGG - chr5_3:800604-800623 None:intergenic 35.0%
TTTGTGTGATTTAGGCTTGA+AGG - chr5_3:800663-800682 None:intergenic 35.0%
! TTTCTTCGATTTTGCTTTGC+AGG + chr5_3:800714-800733 Msa0790170:intron 35.0%
ACATAATTAGCGATTGGTGA+GGG - chr5_3:800793-800812 None:intergenic 35.0%
AACATAATTAGCGATTGGTG+AGG - chr5_3:800794-800813 None:intergenic 35.0%
AAGGGAACATAATTAGCGAT+TGG - chr5_3:800799-800818 None:intergenic 35.0%
ATGTGCACAACTACATTATG+TGG + chr5_3:800847-800866 Msa0790170:intron 35.0%
!! AAAGTACTGCTGAAGTTGAA+GGG + chr5_3:800970-800989 Msa0790170:intron 35.0%
! CGCTTAATTTCCTTTTGTGT+TGG - chr5_3:801006-801025 None:intergenic 35.0%
AGTAAGGAGAGTAGATTAGA+TGG + chr5_3:801194-801213 Msa0790170:intron 35.0%
CAAAAGATAACCATGTAGGT+GGG - chr5_3:801417-801436 None:intergenic 35.0%
ACAAAAGATAACCATGTAGG+TGG - chr5_3:801418-801437 None:intergenic 35.0%
! ACCTACATGGTTATCTTTTG+TGG + chr5_3:801417-801436 Msa0790170:intron 35.0%
ACCACAAAAGATAACCATGT+AGG - chr5_3:801421-801440 None:intergenic 35.0%
!! CTTTTGTGGTAGCTAGTTTA+AGG + chr5_3:801431-801450 Msa0790170:intron 35.0%
CAATGAATTCATACGGTAGA+TGG - chr5_3:801646-801665 None:intergenic 35.0%
AAATCAAAATTGGAAGACGC+TGG + chr5_3:801687-801706 Msa0790170:intron 35.0%
GGGATTATGATTCTTGCTTA+TGG + chr5_3:801771-801790 Msa0790170:intron 35.0%
!!! TTTTGTGTTTCTGAAGCTTG+AGG + chr5_3:801838-801857 Msa0790170:intron 35.0%
TCCAAAACCCTTAATTCCAA+TGG + chr5_3:802006-802025 Msa0790170:intron 35.0%
! ACCATTGGAATTAAGGGTTT+TGG - chr5_3:802010-802029 None:intergenic 35.0%
AAACCCTTAATTCCAATGGT+AGG + chr5_3:802010-802029 Msa0790170:intron 35.0%
AACCCTTAATTCCAATGGTA+GGG + chr5_3:802011-802030 Msa0790170:intron 35.0%
TTCCCTACCATTGGAATTAA+GGG - chr5_3:802016-802035 None:intergenic 35.0%
TTTCCCTACCATTGGAATTA+AGG - chr5_3:802017-802036 None:intergenic 35.0%
CTAACATGCACTAGTTGTTT+AGG - chr5_3:802059-802078 None:intergenic 35.0%
AACATATGCAAGTCTAGTTG+TGG - chr5_3:802217-802236 None:intergenic 35.0%
!! TTATGCTGCTTTCTAACAGA+TGG - chr5_3:802264-802283 None:intergenic 35.0%
GTTAGAAAGCAGCATAATTC+TGG + chr5_3:802267-802286 Msa0790170:CDS 35.0%
AACGGATCAAAGAACATCTT+GGG + chr5_3:802456-802475 Msa0790170:CDS 35.0%
TACAAGCGCAACTAAAAGAA+AGG - chr5_3:802934-802953 None:intergenic 35.0%
! TTAGTTGCGCTTGTATGTTT+TGG + chr5_3:802939-802958 Msa0790170:intron 35.0%
CGGTTTATAATGCTTGAACT+GGG - chr5_3:803045-803064 None:intergenic 35.0%
CCAGTTCAAGCATTATAAAC+CGG + chr5_3:803043-803062 Msa0790170:intron 35.0%
!! TTGAGCATTGGAATTGGAAT+TGG - chr5_3:803346-803365 None:intergenic 35.0%
AAGAAAACAGGCTATTTGCA+GGG + chr5_3:803481-803500 Msa0790170:three_prime_UTR 35.0%
GCGTGTAAATTATTTGGCAT+AGG + chr5_3:803799-803818 Msa0790170:three_prime_UTR 35.0%
AACTGATCACTGATGAAAGG+AGG - chr5_3:800494-800513 None:intergenic 40.0%
AGGAACTGATCACTGATGAA+AGG - chr5_3:800497-800516 None:intergenic 40.0%
CAACAGCAACAATAAGCTGA+AGG + chr5_3:800521-800540 Msa0790170:five_prime_UTR 40.0%
GAAGAAGATGAAGGATGATG+AGG - chr5_3:800557-800576 None:intergenic 40.0%
GCAGCAAAAAACCCTAGTTA+TGG - chr5_3:800605-800624 None:intergenic 40.0%
GAAGCAACTTACAGAATCGT+GGG - chr5_3:800771-800790 None:intergenic 40.0%
!! GAAAGTACTGCTGAAGTTGA+AGG + chr5_3:800969-800988 Msa0790170:intron 40.0%
AATTAAGCGTAGCAGAGATG+AGG + chr5_3:801017-801036 Msa0790170:intron 40.0%
AAGGAGAGTAGATTAGATGG+AGG + chr5_3:801197-801216 Msa0790170:intron 40.0%
GAGGATAGTCACATTACTAG+AGG + chr5_3:801216-801235 Msa0790170:intron 40.0%
ACATTACTAGAGGCAGAGAA+AGG + chr5_3:801226-801245 Msa0790170:intron 40.0%
! AAGCCTTATACCACTACATG+GGG - chr5_3:801362-801381 None:intergenic 40.0%
! CAAGCCTTATACCACTACAT+GGG - chr5_3:801363-801382 None:intergenic 40.0%
! TCAAGCCTTATACCACTACA+TGG - chr5_3:801364-801383 None:intergenic 40.0%
!! TTTTTGTTTCCTTCCACACC+CGG + chr5_3:801390-801409 Msa0790170:intron 40.0%
CGGTGAAATGATGTTCTCTT+GGG - chr5_3:801565-801584 None:intergenic 40.0%
ACGGTGAAATGATGTTCTCT+TGG - chr5_3:801566-801585 None:intergenic 40.0%
ACATGCACTAGTTGTTTAGG+TGG - chr5_3:802056-802075 None:intergenic 40.0%
TGTGCTTTCAGGCTAATGTA+AGG + chr5_3:802384-802403 Msa0790170:intron 40.0%
CAACGGATCAAAGAACATCT+TGG + chr5_3:802455-802474 Msa0790170:CDS 40.0%
TATAAAAGCCGCGAAAGATG+TGG - chr5_3:802670-802689 None:intergenic 40.0%
!!! TGCGCTTGTATGTTTTGGTT+TGG + chr5_3:802944-802963 Msa0790170:intron 40.0%
! CTTTCTTGTGTCGAGAGTTT+TGG + chr5_3:803007-803026 Msa0790170:intron 40.0%
!!! TGTCGAGAGTTTTGGAGAAT+CGG + chr5_3:803015-803034 Msa0790170:intron 40.0%
CCGGTTTATAATGCTTGAAC+TGG - chr5_3:803046-803065 None:intergenic 40.0%
ATCATTTGTGGCATGGTGTT+AGG - chr5_3:803135-803154 None:intergenic 40.0%
ATTTAGCTGACCTGGTATCT+GGG - chr5_3:803175-803194 None:intergenic 40.0%
TATTTAGCTGACCTGGTATC+TGG - chr5_3:803176-803195 None:intergenic 40.0%
GAAGAAAACAGGCTATTTGC+AGG + chr5_3:803480-803499 Msa0790170:three_prime_UTR 40.0%
ACTCGCACAAGCCATATATT+TGG + chr5_3:803653-803672 Msa0790170:three_prime_UTR 40.0%
GTACATGGTCTCTCTGAATA+TGG - chr5_3:803679-803698 None:intergenic 40.0%
!! TGATGAAAGGAGGTTGATGC+AGG - chr5_3:800484-800503 None:intergenic 45.0%
GGAAGCAACTTACAGAATCG+TGG - chr5_3:800772-800791 None:intergenic 45.0%
TAGTGATTCCGAACGACAGA+AGG + chr5_3:800925-800944 Msa0790170:intron 45.0%
TACTAGAGGCAGAGAAAGGA+AGG + chr5_3:801230-801249 Msa0790170:intron 45.0%
TTCATACGGTAGATGGCCAT+TGG - chr5_3:801639-801658 None:intergenic 45.0%
CATTAAACGGTCGGAACCAT+GGG + chr5_3:801888-801907 Msa0790170:intron 45.0%
ATTAAACGGTCGGAACCATG+GGG + chr5_3:801889-801908 Msa0790170:intron 45.0%
! GACGGGGATTATGGTGTTTT+GGG + chr5_3:801969-801988 Msa0790170:intron 45.0%
TGGATGGGAAAACATTCACC+TGG - chr5_3:802650-802669 None:intergenic 45.0%
TTTCCCATCCACATCTTTCG+CGG + chr5_3:802659-802678 Msa0790170:intron 45.0%
!!! GTCGAGAGTTTTGGAGAATC+GGG + chr5_3:803016-803035 Msa0790170:intron 45.0%
TTTAGCTGACCTGGTATCTG+GGG - chr5_3:803174-803193 None:intergenic 45.0%
GTCAGCTAAATACCCTACCA+AGG + chr5_3:803184-803203 Msa0790170:CDS 45.0%
!! ATAGAGGGAGCACCATTAGA+AGG - chr5_3:803261-803280 None:intergenic 45.0%
TTCTAATGGTGCTCCCTCTA+TGG + chr5_3:803260-803279 Msa0790170:CDS 45.0%
! ATGGCTGATGATGCCATAGA+GGG - chr5_3:803276-803295 None:intergenic 45.0%
CATGTATCAAGCCAATCCAC+CGG + chr5_3:803293-803312 Msa0790170:CDS 45.0%
!! AGGTGCTTGAGCATTGGAAT+TGG - chr5_3:803352-803371 None:intergenic 45.0%
! CTATTTTCCATCCGTAGCTC+AGG + chr5_3:803458-803477 Msa0790170:three_prime_UTR 45.0%
! TTTTCTTCCTGAGCTACGGA+TGG - chr5_3:803468-803487 None:intergenic 45.0%
! CCTGTTTTCTTCCTGAGCTA+CGG - chr5_3:803472-803491 None:intergenic 45.0%
ATCGCGAAAGTTCCACAGTG+TGG + chr5_3:800440-800459 Msa0790170:five_prime_UTR 50.0%
TCGCGAAAGTTCCACAGTGT+GGG + chr5_3:800441-800460 Msa0790170:five_prime_UTR 50.0%
CACTTAGGCCTTCTGTCGTT+CGG - chr5_3:800936-800955 None:intergenic 50.0%
CAGAGATGAGGTTGTTGCGT+GGG + chr5_3:801029-801048 Msa0790170:intron 50.0%
ACTACATGGGGTCGACTACA+TGG - chr5_3:801350-801369 None:intergenic 50.0%
ATGTAGTCGACCCCATGTAG+TGG + chr5_3:801349-801368 Msa0790170:intron 50.0%
CGACCCCATGTAGTGGTATA+AGG + chr5_3:801356-801375 Msa0790170:intron 50.0%
ATAACCATGTAGGTGGGACC+GGG - chr5_3:801411-801430 None:intergenic 50.0%
GATAACCATGTAGGTGGGAC+CGG - chr5_3:801412-801431 None:intergenic 50.0%
CCATGGTTCCGACCGTTTAA+TGG - chr5_3:801890-801909 None:intergenic 50.0%
CCATTAAACGGTCGGAACCA+TGG + chr5_3:801887-801906 Msa0790170:intron 50.0%
AGAGTGACTAGGAGGGAAGA+AGG + chr5_3:801925-801944 Msa0790170:intron 50.0%
GAGTGACTAGGAGGGAAGAA+GGG + chr5_3:801926-801945 Msa0790170:intron 50.0%
AGTGACTAGGAGGGAAGAAG+GGG + chr5_3:801927-801946 Msa0790170:intron 50.0%
! GGACGGGGATTATGGTGTTT+TGG + chr5_3:801968-801987 Msa0790170:intron 50.0%
GCACAGCATTTCCCTACCAT+TGG - chr5_3:802025-802044 None:intergenic 50.0%
AGAACATCTTGGGCAAGCTG+CGG + chr5_3:802466-802485 Msa0790170:CDS 50.0%
!!! GCTTTTCAGCAGGTTGGTGT+GGG + chr5_3:802488-802507 Msa0790170:CDS 50.0%
GGCAATACAGGAGGAAGGTT+TGG - chr5_3:802539-802558 None:intergenic 50.0%
TCCAGGAATGGGAAATCTCG+GGG - chr5_3:802564-802583 None:intergenic 50.0%
CTCCAGGAATGGGAAATCTC+GGG - chr5_3:802565-802584 None:intergenic 50.0%
CCTCCAGGAATGGGAAATCT+CGG - chr5_3:802566-802585 None:intergenic 50.0%
AGAGGTCTGAATCCTGGCAT+TGG - chr5_3:802596-802615 None:intergenic 50.0%
CTCGACCTTTACCTGTTCCT+GGG + chr5_3:802621-802640 Msa0790170:CDS 50.0%
TCGACCTTTACCTGTTCCTG+GGG + chr5_3:802622-802641 Msa0790170:CDS 50.0%
AAGCCGCGAAAGATGTGGAT+GGG - chr5_3:802665-802684 None:intergenic 50.0%
AAAGCCGCGAAAGATGTGGA+TGG - chr5_3:802666-802685 None:intergenic 50.0%
! TTGTGGCATGGTGTTAGGTG+CGG - chr5_3:803130-803149 None:intergenic 50.0%
!! TGGAGGCATCATTTGTGGCA+TGG - chr5_3:803142-803161 None:intergenic 50.0%
TTAGCTGACCTGGTATCTGG+GGG - chr5_3:803173-803192 None:intergenic 50.0%
! GGTAGGGTATTTAGCTGACC+TGG - chr5_3:803183-803202 None:intergenic 50.0%
! GAATGAAGGTGGCCTTGGTA+GGG - chr5_3:803199-803218 None:intergenic 50.0%
TGCTTCCAGGAACTGTTGGT+GGG - chr5_3:803227-803246 None:intergenic 50.0%
ACCACAGCACCACCTTCTAA+TGG + chr5_3:803246-803265 Msa0790170:CDS 50.0%
! ACCATTAGAAGGTGGTGCTG+TGG - chr5_3:803250-803269 None:intergenic 50.0%
! CATGGCTGATGATGCCATAG+AGG - chr5_3:803277-803296 None:intergenic 50.0%
!! CGGTGGATTGGCTTGATACA+TGG - chr5_3:803295-803314 None:intergenic 50.0%
TTACCATACCCTCCAGACGA+TGG - chr5_3:803321-803340 None:intergenic 50.0%
! CCAGGTCATTGATTGCTCTC+AGG - chr5_3:803372-803391 None:intergenic 50.0%
CCTGAGAGCAATCAATGACC+TGG + chr5_3:803369-803388 Msa0790170:exon 50.0%
CCGTAGCTCAGGAAGAAAAC+AGG + chr5_3:803469-803488 Msa0790170:three_prime_UTR 50.0%
ACAGGCTATTTGCAGGGACT+CGG + chr5_3:803487-803506 Msa0790170:three_prime_UTR 50.0%
ATGCGTCTATGCCCACACTG+TGG - chr5_3:800455-800474 None:intergenic 55.0%
GCACTCAAACAGCCATGCCT+CGG + chr5_3:800623-800642 Msa0790170:exon 55.0%
! TGAGTTGCAGTACCGAGGCA+TGG - chr5_3:800638-800657 None:intergenic 55.0%
AGGAGTGAGTTGCAGTACCG+AGG - chr5_3:800643-800662 None:intergenic 55.0%
GCAGAGATGAGGTTGTTGCG+TGG + chr5_3:801028-801047 Msa0790170:intron 55.0%
AGGTTGTTGCGTGGGATGTG+TGG + chr5_3:801037-801056 Msa0790170:intron 55.0%
TTGCGTGGGATGTGTGGCAA+GGG + chr5_3:801043-801062 Msa0790170:intron 55.0%
TGGGGTCGACTACATGGATC+AGG - chr5_3:801344-801363 None:intergenic 55.0%
TAGTCACTCTCTCCCCACCA+TGG - chr5_3:801915-801934 None:intergenic 55.0%
! ATGGTGGGGAGAGAGTGACT+AGG + chr5_3:801914-801933 Msa0790170:intron 55.0%
TGGGGAGAGAGTGACTAGGA+GGG + chr5_3:801918-801937 Msa0790170:intron 55.0%
GTGACTAGGAGGGAAGAAGG+GGG + chr5_3:801928-801947 Msa0790170:intron 55.0%
TGACTAGGAGGGAAGAAGGG+GGG + chr5_3:801929-801948 Msa0790170:intron 55.0%
TGGTAGGGAAATGCTGTGCG+CGG + chr5_3:802026-802045 Msa0790170:intron 55.0%
!!! GGCTTTTCAGCAGGTTGGTG+TGG + chr5_3:802487-802506 Msa0790170:CDS 55.0%
AATCTCGGGGGTGGCAATAC+AGG - chr5_3:802551-802570 None:intergenic 55.0%
CCAGGAATGGGAAATCTCGG+GGG - chr5_3:802563-802582 None:intergenic 55.0%
CCGAGATTTCCCATTCCTGG+AGG + chr5_3:802563-802582 Msa0790170:CDS 55.0%
GGTGGTTGACCTCCAGGAAT+GGG - chr5_3:802575-802594 None:intergenic 55.0%
TGGTGGTTGACCTCCAGGAA+TGG - chr5_3:802576-802595 None:intergenic 55.0%
! GGTCTGAATCCTGGCATTGG+TGG - chr5_3:802593-802612 None:intergenic 55.0%
GGCATGAGAGGTCTGAATCC+TGG - chr5_3:802602-802621 None:intergenic 55.0%
GGTAAAGGTCGAGGCATGAG+AGG - chr5_3:802614-802633 None:intergenic 55.0%
CCAGGAACAGGTAAAGGTCG+AGG - chr5_3:802623-802642 None:intergenic 55.0%
CCTCGACCTTTACCTGTTCC+TGG + chr5_3:802620-802639 Msa0790170:CDS 55.0%
AAACATTCACCTGGTGCCCC+AGG - chr5_3:802641-802660 None:intergenic 55.0%
!! CCAGGTGGAGGCATCATTTG+TGG - chr5_3:803147-803166 None:intergenic 55.0%
CCACAAATGATGCCTCCACC+TGG + chr5_3:803144-803163 Msa0790170:CDS 55.0%
TAGCTGACCTGGTATCTGGG+GGG - chr5_3:803172-803191 None:intergenic 55.0%
! CGAATGAAGGTGGCCTTGGT+AGG - chr5_3:803200-803219 None:intergenic 55.0%
! CTTCCAGGAACTGTTGGTGG+GGG - chr5_3:803225-803244 None:intergenic 55.0%
GCTTCCAGGAACTGTTGGTG+GGG - chr5_3:803226-803245 None:intergenic 55.0%
GTGCTTCCAGGAACTGTTGG+TGG - chr5_3:803228-803247 None:intergenic 55.0%
GTGGTGCTTCCAGGAACTGT+TGG - chr5_3:803231-803250 None:intergenic 55.0%
!! GAGGGAGCACCATTAGAAGG+TGG - chr5_3:803258-803277 None:intergenic 55.0%
GCTCTCAGGTGCTTGAGCAT+TGG - chr5_3:803358-803377 None:intergenic 55.0%
GTTGCGTGGGATGTGTGGCA+AGG + chr5_3:801042-801061 Msa0790170:intron 60.0%
GTGGGGAGAGAGTGACTAGG+AGG + chr5_3:801917-801936 Msa0790170:intron 60.0%
GACTAGGAGGGAAGAAGGGG+GGG + chr5_3:801930-801949 Msa0790170:intron 60.0%
ACTAGGAGGGAAGAAGGGGG+GGG + chr5_3:801931-801950 Msa0790170:intron 60.0%
! GCAAGCTGCGGCTTTTCAGC+AGG + chr5_3:802478-802497 Msa0790170:CDS 60.0%
! GCTGCGGCTTTTCAGCAGGT+TGG + chr5_3:802482-802501 Msa0790170:CDS 60.0%
GGGGTGGCAATACAGGAGGA+AGG - chr5_3:802544-802563 None:intergenic 60.0%
GGAATGGGAAATCTCGGGGG+TGG - chr5_3:802560-802579 None:intergenic 60.0%
CCCCCGAGATTTCCCATTCC+TGG + chr5_3:802560-802579 Msa0790170:CDS 60.0%
!! GGCATTGGTGGTTGACCTCC+AGG - chr5_3:802581-802600 None:intergenic 60.0%
GGAGGTCAACCACCAATGCC+AGG + chr5_3:802581-802600 Msa0790170:CDS 60.0%
GGTGCCCCAGGAACAGGTAA+AGG - chr5_3:802629-802648 None:intergenic 60.0%
! TTACCTGTTCCTGGGGCACC+AGG + chr5_3:802629-802648 Msa0790170:CDS 60.0%
! GGCATGGTGTTAGGTGCGGA+AGG - chr5_3:803126-803145 None:intergenic 60.0%
GGAGCGAATGAAGGTGGCCT+TGG - chr5_3:803204-803223 None:intergenic 60.0%
! GTTGGTGGGGGAGCGAATGA+AGG - chr5_3:803213-803232 None:intergenic 60.0%
!! AGACGATGGTGCCGGTGGAT+TGG - chr5_3:803307-803326 None:intergenic 60.0%
AATCCACCGGCACCATCGTC+TGG + chr5_3:803306-803325 Msa0790170:CDS 60.0%
TACCCTCCAGACGATGGTGC+CGG - chr5_3:803315-803334 None:intergenic 60.0%
GCACCATCGTCTGGAGGGTA+TGG + chr5_3:803315-803334 Msa0790170:CDS 60.0%
TAGGTGGGACCGGGTGTGGA+AGG - chr5_3:801402-801421 None:intergenic 65.0%
CATGTAGGTGGGACCGGGTG+TGG - chr5_3:801406-801425 None:intergenic 65.0%
CACACCCGGTCCCACCTACA+TGG + chr5_3:801404-801423 Msa0790170:intron 65.0%
TCGGAACCATGGGGCCATGG+TGG + chr5_3:801898-801917 Msa0790170:intron 65.0%
CGGAACCATGGGGCCATGGT+GGG + chr5_3:801899-801918 Msa0790170:intron 65.0%
GGAACCATGGGGCCATGGTG+GGG + chr5_3:801900-801919 Msa0790170:intron 65.0%
CTAGGAGGGAAGAAGGGGGG+GGG + chr5_3:801932-801951 Msa0790170:intron 65.0%
TAGGAGGGAAGAAGGGGGGG+GGG + chr5_3:801933-801952 Msa0790170:intron 65.0%
CTCGGGGGTGGCAATACAGG+AGG - chr5_3:802548-802567 None:intergenic 65.0%
TCACCTGGTGCCCCAGGAAC+AGG - chr5_3:802635-802654 None:intergenic 65.0%
GGTGGGGGAGCGAATGAAGG+TGG - chr5_3:803210-803229 None:intergenic 65.0%
GCTCCCCCACCAACAGTTCC+TGG + chr5_3:803219-803238 Msa0790170:CDS 65.0%
!! GGTGGTGCTGTGGTGCTTCC+AGG - chr5_3:803240-803259 None:intergenic 65.0%
CACCGGCACCATCGTCTGGA+GGG + chr5_3:803310-803329 Msa0790170:CDS 65.0%
CGGTCGGAACCATGGGGCCA+TGG + chr5_3:801895-801914 Msa0790170:intron 70.0%
CTCTCCCCACCATGGCCCCA+TGG - chr5_3:801907-801926 None:intergenic 70.0%
AGGAGGGAAGAAGGGGGGGG+GGG + chr5_3:801934-801953 Msa0790170:intron 70.0%
!! ATCTGGGGGGCACCAGGTGG+AGG - chr5_3:803159-803178 None:intergenic 70.0%
!! GGTATCTGGGGGGCACCAGG+TGG - chr5_3:803162-803181 None:intergenic 70.0%
!! CCTGGTATCTGGGGGGCACC+AGG - chr5_3:803165-803184 None:intergenic 70.0%
CCTGGTGCCCCCCAGATACC+AGG + chr5_3:803162-803181 Msa0790170:CDS 70.0%
! CCTCCAGACGATGGTGCCGG+TGG - chr5_3:803312-803331 None:intergenic 70.0%
CCACCGGCACCATCGTCTGG+AGG + chr5_3:803309-803328 Msa0790170:CDS 70.0%
GGAGGGAAGAAGGGGGGGGG+GGG + chr5_3:801935-801954 Msa0790170:intron 75.0%
GAGGGAAGAAGGGGGGGGGG+GGG + chr5_3:801936-801955 Msa0790170:intron 75.0%
AGGGAAGAAGGGGGGGGGGG+GGG + chr5_3:801937-801956 Msa0790170:intron 75.0%
GGGGGGGGGGACGGGGATTA+TGG + chr5_3:801960-801979 Msa0790170:intron 75.0%
! GGGAAGAAGGGGGGGGGGGG+GGG + chr5_3:801938-801957 Msa0790170:intron 80.0%
! GGAAGAAGGGGGGGGGGGGG+GGG + chr5_3:801939-801958 Msa0790170:intron 80.0%
! GAAGAAGGGGGGGGGGGGGG+GGG + chr5_3:801940-801959 Msa0790170:intron 80.0%
! AAGAAGGGGGGGGGGGGGGG+GGG + chr5_3:801941-801960 Msa0790170:intron 80.0%
! AGAAGGGGGGGGGGGGGGGG+GGG + chr5_3:801942-801961 Msa0790170:intron 85.0%
! GAAGGGGGGGGGGGGGGGGG+GGG + chr5_3:801943-801962 Msa0790170:intron 90.0%
! AAGGGGGGGGGGGGGGGGGG+GGG + chr5_3:801944-801963 Msa0790170:intron 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:801945-801964 Msa0790170:intron 95.0%
! GGGGGGGGGGGGGGGGGGGA+CGG + chr5_3:801951-801970 Msa0790170:intron 95.0%
! GGGGGGGGGGGGGGGGGGAC+GGG + chr5_3:801952-801971 Msa0790170:intron 95.0%
! GGGGGGGGGGGGGGGGGACG+GGG + chr5_3:801953-801972 Msa0790170:intron 95.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 800440 803837 800440 ID=Msa0790170;Name=Msa0790170
chr5_3 mRNA 800440 803837 800440 ID=Msa0790170-mRNA-1;Parent=Msa0790170;Name=Msa0790170-mRNA-1;_AED=0.02;_eAED=0.02;_QI=197|1|1|1|1|1|5|451|205
chr5_3 exon 800440 800644 800440 ID=Msa0790170-mRNA-1:exon:305;Parent=Msa0790170-mRNA-1
chr5_3 exon 800736 800778 800736 ID=Msa0790170-mRNA-1:exon:306;Parent=Msa0790170-mRNA-1
chr5_3 exon 802261 802302 802261 ID=Msa0790170-mRNA-1:exon:307;Parent=Msa0790170-mRNA-1
chr5_3 exon 802395 802650 802395 ID=Msa0790170-mRNA-1:exon:308;Parent=Msa0790170-mRNA-1
chr5_3 exon 803118 803837 803118 ID=Msa0790170-mRNA-1:exon:309;Parent=Msa0790170-mRNA-1
chr5_3 five_prime_UTR 800440 800636 800440 ID=Msa0790170-mRNA-1:five_prime_utr;Parent=Msa0790170-mRNA-1
chr5_3 CDS 800637 800644 800637 ID=Msa0790170-mRNA-1:cds;Parent=Msa0790170-mRNA-1
chr5_3 CDS 800736 800778 800736 ID=Msa0790170-mRNA-1:cds;Parent=Msa0790170-mRNA-1
chr5_3 CDS 802261 802302 802261 ID=Msa0790170-mRNA-1:cds;Parent=Msa0790170-mRNA-1
chr5_3 CDS 802395 802650 802395 ID=Msa0790170-mRNA-1:cds;Parent=Msa0790170-mRNA-1
chr5_3 CDS 803118 803386 803118 ID=Msa0790170-mRNA-1:cds;Parent=Msa0790170-mRNA-1
chr5_3 three_prime_UTR 803387 803837 803387 ID=Msa0790170-mRNA-1:three_prime_utr;Parent=Msa0790170-mRNA-1
Gene Sequence

>Msa0790170

ATGCCTCGGTACTATTGTGACTACTGCGATACTTATTTGACCCACGATTCTCCATCTGTTAGAAAGCAGCATAATTCTGGTTATAAACACAAGGCTAATGTAAGGTCCTACTATCAGCAATTTGAAGAACAACAAACCCAAAGTTTAATTGATCAACGGATCAAAGAACATCTTGGGCAAGCTGCGGCTTTTCAGCAGGTTGGTGTGGGTTATAATAATCTAATGGTTCAAAGACCAAACCTTCCTCCTGTATTGCCACCCCCGAGATTTCCCATTCCTGGAGGTCAACCACCAATGCCAGGATTCAGACCTCTCATGCCTCGACCTTTACCTGTTCCTGGGGCACCAGGGTATCCTTCCGCACCTAACACCATGCCACAAATGATGCCTCCACCTGGTGCCCCCCAGATACCAGGTCAGCTAAATACCCTACCAAGGCCACCTTCATTCGCTCCCCCACCAACAGTTCCTGGAAGCACCACAGCACCACCTTCTAATGGTGCTCCCTCTATGGCATCATCAGCCATGTATCAAGCCAATCCACCGGCACCATCGTCTGGAGGGTATGGTAATTCCAATTCCAATTCCAATGCTCAAGCACCTGAGAGCAATCAATGA
Protein sequence

>Msa0790170

MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVGYNNLMVQRPNLPPVLPPPRFPIPGGQPPMPGFRPLMPRPLPVPGAPGYPSAPNTMPQMMPPPGAPQIPGQLNTLPRPPSFAPPPTVPGSTTAPPSNGAPSMASSAMYQANPPAPSSGGYGNSNSNSNAQAPESNQ*