AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0088510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0088510 MtrunA17_Chr1g0205691 98.853 523 6 0 1 523 1 523 0.0 1052
Msa0088510 MtrunA17_Chr5g0394341 83.203 512 82 2 13 523 13 521 0.0 874
Msa0088510 MtrunA17_Chr1g0205681 69.400 500 152 1 1 499 1 500 0.0 723
Msa0088510 MtrunA17_Chr1g0205671 68.600 500 155 2 1 499 1 499 0.0 717
Msa0088510 MtrunA17_Chr3g0078971 56.600 500 210 6 10 507 11 505 0.0 595
Msa0088510 MtrunA17_Chr5g0445601 58.200 500 199 6 1 495 1 495 0.0 588
Msa0088510 MtrunA17_Chr4g0065311 56.379 486 207 4 13 498 12 492 0.0 587
Msa0088510 MtrunA17_Chr7g0257631 57.600 500 202 6 1 495 35 529 0.0 578
Msa0088510 MtrunA17_Chr5g0437021 56.112 499 215 3 7 504 8 503 0.0 578
Msa0088510 MtrunA17_Chr4g0065324 52.883 503 231 5 2 503 8 505 0.0 565
Msa0088510 MtrunA17_Chr4g0048411 58.248 491 201 3 11 499 12 500 0.0 557
Msa0088510 MtrunA17_Chr1g0164871 54.076 503 222 4 12 513 13 507 0.0 554
Msa0088510 MtrunA17_Chr1g0164851 54.918 488 216 3 12 498 13 497 0.0 550
Msa0088510 MtrunA17_Chr3g0078991 52.778 504 229 7 10 510 11 508 0.0 550
Msa0088510 MtrunA17_Chr8g0390261 55.144 486 213 5 14 498 18 499 0.0 542
Msa0088510 MtrunA17_Chr8g0390141 53.846 494 223 5 14 506 18 507 0.0 540
Msa0088510 MtrunA17_Chr6g0486681 53.557 506 226 6 1 501 1 502 0.0 538
Msa0088510 MtrunA17_Chr6g0486671 53.557 506 226 6 1 501 1 502 0.0 538
Msa0088510 MtrunA17_Chr5g0417611 52.242 513 241 3 1 510 1 512 0.0 535
Msa0088510 MtrunA17_Chr3g0128081 52.039 515 242 3 1 513 1 512 0.0 531
Msa0088510 MtrunA17_Chr5g0420841 52.305 499 232 3 13 509 12 506 0.0 531
Msa0088510 MtrunA17_Chr4g0048051 54.418 498 221 4 7 501 8 502 0.0 519
Msa0088510 MtrunA17_Chr3g0085971 50.916 491 238 2 13 501 12 501 1.37e-177 509
Msa0088510 MtrunA17_Chr3g0115711 47.826 506 256 6 1 503 1 501 7.03e-176 504
Msa0088510 MtrunA17_Chr3g0115741 48.980 490 240 7 16 501 20 503 4.99e-175 503
Msa0088510 MtrunA17_Chr3g0115781 47.992 523 249 11 1 514 1 509 1.56e-174 501
Msa0088510 MtrunA17_Chr3g0115751 48.178 494 248 6 16 506 22 510 5.62e-174 500
Msa0088510 MtrunA17_Chr3g0115721 47.358 511 258 8 1 506 1 505 7.41e-174 499
Msa0088510 MtrunA17_Chr3g0128171 53.982 452 204 3 49 497 1 451 2.56e-163 471
Msa0088510 MtrunA17_Chr3g0078791 50.000 444 194 4 70 511 15 432 1.58e-150 437
Msa0088510 MtrunA17_Chr3g0115731 43.580 514 244 12 1 502 1 480 5.67e-149 436
Msa0088510 MtrunA17_Chr4g0065351 53.666 341 155 3 161 501 1 338 8.53e-135 395
Msa0088510 MtrunA17_Chr6g0485661 30.886 463 281 10 27 476 63 499 5.31e-58 201
Msa0088510 MtrunA17_Chr7g0214451 29.980 507 311 13 11 505 22 496 1.00e-57 199
Msa0088510 MtrunA17_Chr4g0034681 29.183 514 313 12 25 513 32 519 6.82e-56 195
Msa0088510 MtrunA17_Chr1g0213611 28.937 508 328 9 5 499 57 544 7.60e-56 196
Msa0088510 MtrunA17_Chr3g0144361 28.953 487 286 9 26 483 32 487 9.34e-56 195
Msa0088510 MtrunA17_Chr3g0115771 34.810 316 158 7 151 463 5 275 2.03e-55 187
Msa0088510 MtrunA17_Chr4g0036021 28.106 491 305 9 26 496 31 493 3.10e-54 191
Msa0088510 MtrunA17_Chr8g0390521 28.310 491 312 10 7 483 3 467 1.94e-53 188
Msa0088510 MtrunA17_Chr4g0021771 27.071 495 320 10 23 505 55 520 6.72e-53 187
Msa0088510 MtrunA17_Chr4g0032021 30.178 507 306 12 6 489 75 556 8.81e-52 185
Msa0088510 MtrunA17_Chr2g0282031 27.966 472 301 10 23 483 53 496 2.06e-50 181
Msa0088510 MtrunA17_Chr1g0213631 31.202 391 254 9 108 491 53 435 4.41e-50 178
Msa0088510 MtrunA17_Chr8g0373531 29.530 447 286 7 83 505 59 500 5.45e-50 179
Msa0088510 MtrunA17_Chr5g0432581 29.452 438 280 7 89 502 65 497 6.83e-50 179
Msa0088510 MtrunA17_Chr4g0039651 28.600 493 305 11 10 486 38 499 9.17e-50 178
Msa0088510 MtrunA17_Chr7g0273281 27.572 486 306 8 10 483 40 491 5.18e-48 173
Msa0088510 MtrunA17_Chr2g0303731 32.345 371 221 8 20 382 24 372 3.07e-45 167
Msa0088510 MtrunA17_Chr6g0457781 28.903 474 293 11 18 485 105 540 4.13e-45 166
Msa0088510 MtrunA17_Chr4g0065341 51.316 152 70 2 3 152 6 155 4.60e-45 156
Msa0088510 MtrunA17_Chr8g0376631 32.749 342 199 6 20 352 24 343 2.59e-44 164
Msa0088510 MtrunA17_Chr7g0250881 29.449 472 289 12 20 485 67 500 7.44e-44 162
Msa0088510 MtrunA17_Chr8g0373181 28.326 466 299 9 22 483 47 481 1.44e-43 161
Msa0088510 MtrunA17_Chr8g0376601 31.214 346 207 7 16 352 20 343 1.44e-42 159
Msa0088510 MtrunA17_Chr8g0376611 37.008 254 147 5 108 352 27 276 1.57e-42 158
Msa0088510 MtrunA17_Chr2g0303701 31.563 339 204 7 20 352 24 340 3.76e-42 158
Msa0088510 MtrunA17_Chr1g0155221 30.829 386 248 7 107 485 113 486 7.70e-42 156
Msa0088510 MtrunA17_Chr8g0373191 30.878 353 230 5 135 483 111 453 1.04e-40 152
Msa0088510 MtrunA17_Chr2g0290181 28.715 397 247 9 1 382 1 376 3.11e-40 153
Msa0088510 MtrunA17_Chr5g0446681 44.565 184 65 2 1 184 1 147 2.40e-39 144
Msa0088510 MtrunA17_Chr5g0446681 49.315 146 68 2 367 512 149 288 1.50e-34 131
Msa0088510 MtrunA17_Chr4g0066581 30.130 385 249 7 104 483 113 482 1.04e-38 147
Msa0088510 MtrunA17_Chr2g0286721 26.778 478 313 9 9 483 36 479 2.13e-38 146
Msa0088510 MtrunA17_Chr5g0403831 27.166 427 289 7 78 483 66 491 9.46e-38 145
Msa0088510 MtrunA17_Chr7g0259471 26.044 407 286 5 83 487 80 473 2.83e-37 143
Msa0088510 MtrunA17_Chr3g0119401 27.494 411 270 12 88 487 139 532 4.12e-37 144
Msa0088510 MtrunA17_Chr7g0259221 26.781 407 283 5 83 487 82 475 4.77e-37 142
Msa0088510 MtrunA17_Chr4g0004821 24.722 449 321 8 46 491 42 476 2.20e-35 138
Msa0088510 MtrunA17_Chr6g0486021 25.897 390 273 7 46 433 56 431 2.85e-32 129
Msa0088510 MtrunA17_Chr3g0121674 27.213 305 213 6 205 504 2 302 3.18e-31 122
Msa0088510 MtrunA17_Chr2g0290161 29.010 293 169 8 99 381 19 282 2.40e-29 120
Msa0088510 MtrunA17_Chr7g0228781 38.418 177 74 3 11 152 27 203 3.54e-28 111
Msa0088510 MtrunA17_Chr3g0115761 46.218 119 60 2 49 166 1 116 3.31e-26 103
Msa0088510 MtrunA17_Chr7g0273261 29.956 227 149 4 257 483 17 233 9.06e-21 92.0
Msa0088510 MtrunA17_Chr5g0434231 28.652 178 101 2 81 258 3 154 8.34e-19 83.6
Msa0088510 MtrunA17_Chr3g0144261 33.523 176 114 3 88 261 48 222 1.57e-18 89.4
Msa0088510 MtrunA17_Chr3g0144261 27.888 251 151 10 257 485 473 715 2.52e-14 75.9
Msa0088510 MtrunA17_Chr3g0146061 30.978 184 124 3 88 269 50 232 9.22e-17 83.6
Msa0088510 MtrunA17_Chr3g0146061 23.887 247 158 7 257 481 483 721 1.59e-11 67.0
Msa0088510 MtrunA17_Chr5g0407441 24.896 241 158 5 22 260 4 223 1.04e-16 83.6
Msa0088510 MtrunA17_Chr5g0407441 27.273 264 161 7 235 481 454 703 6.03e-12 68.6
Msa0088510 MtrunA17_Chr8g0370141 26.908 249 157 7 22 267 4 230 3.94e-16 80.5
Msa0088510 MtrunA17_Chr5g0419321 25.281 178 131 2 84 260 75 251 2.40e-15 79.3
Msa0088510 MtrunA17_Chr5g0419321 27.897 233 149 5 264 485 509 733 9.91e-12 67.8
Msa0088510 MtrunA17_Chr8g0370151 27.953 254 154 6 241 481 105 342 5.73e-15 76.6
Msa0088510 MtrunA17_Chr6g0450271 37.398 123 66 4 239 352 32 152 1.32e-14 73.9
Msa0088510 MtrunA17_Chr5g0404191 30.994 171 109 3 107 275 114 277 2.06e-14 73.9
Msa0088510 MtrunA17_Chr7g0273271 27.232 224 134 5 12 234 16 211 9.93e-13 67.4
Msa0088510 MtrunA17_Chr5g0434241 38.384 99 56 3 256 352 1 96 2.21e-12 63.9
Msa0088510 MtrunA17_Chr6g0450291 38.384 99 56 3 256 352 1 96 6.68e-12 64.3
Msa0088510 MtrunA17_Chr6g0450241 38.384 99 56 3 256 352 1 96 1.23e-11 63.5
Msa0088510 MtrunA17_Chr6g0450281 38.384 99 56 3 256 352 1 96 1.28e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0088510 AT5G26340.1 77.264 519 116 2 1 518 1 518 0.0 835
Msa0088510 AT4G02050.2 56.140 513 214 6 1 507 1 508 0.0 607
Msa0088510 AT4G02050.1 56.140 513 214 6 1 507 1 508 0.0 607
Msa0088510 AT1G11260.1 55.426 516 225 4 1 513 1 514 0.0 584
Msa0088510 AT1G77210.2 56.436 505 211 7 1 500 1 501 0.0 570
Msa0088510 AT1G77210.1 56.436 505 211 7 1 500 1 501 0.0 570
Msa0088510 AT5G23270.1 55.600 500 218 3 1 497 1 499 0.0 567
Msa0088510 AT5G26250.1 57.968 502 206 4 7 507 7 504 0.0 565
Msa0088510 AT3G19940.1 54.209 487 219 4 18 503 21 504 0.0 565
Msa0088510 AT1G50310.1 54.134 508 220 7 18 523 21 517 0.0 563
Msa0088510 AT3G05960.1 57.256 503 209 4 7 507 6 504 0.0 556
Msa0088510 AT4G21480.1 55.020 498 218 4 8 503 9 502 0.0 541
Msa0088510 AT3G19930.1 51.098 501 236 4 12 511 13 505 0.0 527
Msa0088510 AT3G19930.2 51.098 501 236 4 12 511 13 505 0.0 527
Msa0088510 AT1G34580.1 47.843 510 247 8 1 499 1 502 6.86e-171 493
Msa0088510 AT1G07340.1 51.429 490 233 3 12 500 13 498 3.10e-169 488
Msa0088510 AT5G61520.1 48.297 499 247 7 16 508 18 511 8.60e-163 472
Msa0088510 AT1G34580.2 47.484 457 229 6 49 499 1 452 2.62e-152 443
Msa0088510 AT5G61520.2 47.109 467 236 6 48 508 2 463 3.50e-146 428
Msa0088510 AT1G77210.3 58.286 350 142 4 152 500 6 352 3.58e-144 419
Msa0088510 AT1G50310.2 52.941 374 164 6 152 523 11 374 2.74e-141 412
Msa0088510 AT2G18480.1 30.297 472 281 10 36 485 36 481 3.59e-59 204
Msa0088510 AT2G16130.1 29.730 481 290 8 26 483 30 485 4.74e-58 201
Msa0088510 AT2G16120.1 30.544 478 290 10 26 483 30 485 9.20e-58 200
Msa0088510 AT4G36670.1 30.162 494 296 10 13 483 8 475 1.83e-56 196
Msa0088510 AT3G18830.1 28.750 480 299 7 26 485 40 496 2.55e-55 194
Msa0088510 AT5G59250.1 31.837 490 283 13 22 489 98 558 3.27e-51 184
Msa0088510 AT2G43330.1 28.400 500 321 11 26 513 35 509 2.52e-50 180
Msa0088510 AT2G20780.1 27.984 486 309 10 10 483 40 496 3.07e-50 180
Msa0088510 AT1G30220.1 31.233 365 218 7 1 352 1 345 1.42e-48 177
Msa0088510 AT1G08930.1 30.833 480 287 13 10 483 47 487 1.59e-48 175
Msa0088510 AT1G08930.2 30.833 480 287 13 10 483 47 487 1.59e-48 175
Msa0088510 AT2G20780.2 28.780 410 275 6 83 483 37 438 6.49e-48 173
Msa0088510 AT5G27350.1 27.536 483 313 10 10 490 20 467 1.97e-46 169
Msa0088510 AT3G05165.3 26.250 480 309 9 10 483 19 459 2.27e-46 169
Msa0088510 AT3G05165.2 26.250 480 309 9 10 483 19 459 2.27e-46 169
Msa0088510 AT3G05165.1 26.250 480 309 9 10 483 19 459 2.27e-46 169
Msa0088510 AT5G17010.1 29.209 493 281 13 23 486 48 501 1.48e-45 167
Msa0088510 AT5G17010.3 29.209 493 281 13 23 486 48 501 1.48e-45 167
Msa0088510 AT5G17010.4 29.209 493 281 13 23 486 48 501 1.48e-45 167
Msa0088510 AT1G08890.1 30.807 409 264 8 83 487 67 460 2.04e-45 166
Msa0088510 AT1G08900.5 31.514 403 257 6 85 483 25 412 1.02e-44 163
Msa0088510 AT3G05160.1 26.458 480 308 10 10 483 10 450 1.66e-44 163
Msa0088510 AT1G08900.1 31.514 403 257 6 85 483 67 454 2.21e-44 163
Msa0088510 AT1G08900.2 31.514 403 257 6 85 483 67 454 2.21e-44 163
Msa0088510 AT1G08900.3 31.514 403 257 6 85 483 59 446 2.50e-44 162
Msa0088510 AT3G05160.3 27.901 405 269 6 85 483 14 401 2.16e-43 159
Msa0088510 AT3G05160.2 27.901 405 269 6 85 483 14 401 2.16e-43 159
Msa0088510 AT5G27360.1 26.337 486 315 9 10 490 24 471 2.54e-43 160
Msa0088510 AT3G05400.1 28.542 480 297 13 11 483 15 455 2.81e-43 160
Msa0088510 AT3G03090.1 29.873 472 291 14 30 486 55 501 3.07e-43 160
Msa0088510 AT1G75220.1 29.747 474 289 11 19 483 44 482 6.96e-43 159
Msa0088510 AT5G27360.3 26.337 486 315 9 10 490 72 519 1.04e-42 160
Msa0088510 AT5G16150.2 28.125 480 301 11 10 483 97 538 5.75e-42 158
Msa0088510 AT5G16150.1 28.125 480 301 11 10 483 97 538 5.75e-42 158
Msa0088510 AT5G16150.3 28.125 480 301 11 10 483 97 538 5.75e-42 158
Msa0088510 AT2G48020.2 27.047 403 279 5 83 483 68 457 3.94e-41 154
Msa0088510 AT2G48020.1 27.047 403 279 5 83 483 68 457 3.94e-41 154
Msa0088510 AT3G05165.6 25.486 463 300 9 1 457 10 433 5.01e-41 155
Msa0088510 AT3G05155.1 25.941 478 314 9 12 486 17 457 2.86e-40 152
Msa0088510 AT5G18840.1 28.224 411 279 6 83 490 84 481 3.00e-40 152
Msa0088510 AT1G05030.1 27.991 443 300 10 46 483 85 513 3.37e-40 152
Msa0088510 AT3G05165.4 27.356 435 270 11 1 428 10 405 6.57e-40 151
Msa0088510 AT3G05165.5 27.356 435 270 11 1 428 10 405 6.57e-40 151
Msa0088510 AT1G05030.2 28.049 410 278 9 79 483 64 461 1.46e-39 150
Msa0088510 AT4G16480.2 30.728 371 214 9 1 352 1 347 3.17e-39 150
Msa0088510 AT4G16480.3 30.728 371 214 9 1 352 1 347 3.17e-39 150
Msa0088510 AT4G16480.1 30.728 371 214 9 1 352 1 347 3.17e-39 150
Msa0088510 AT1G54730.2 26.998 463 300 9 28 487 38 465 4.57e-39 149
Msa0088510 AT3G05150.2 27.143 490 316 10 10 492 23 478 5.21e-39 149
Msa0088510 AT1G08920.1 26.483 472 309 9 15 483 25 461 6.93e-39 148
Msa0088510 AT3G05150.1 27.044 477 311 9 10 483 23 465 8.12e-39 148
Msa0088510 AT3G05150.3 27.044 477 311 9 10 483 23 465 8.12e-39 148
Msa0088510 AT5G27360.2 27.368 380 261 6 113 490 1 367 2.32e-38 144
Msa0088510 AT5G27360.5 27.368 380 261 6 113 490 1 367 2.32e-38 144
Msa0088510 AT1G19450.1 28.238 471 300 10 19 483 45 483 3.17e-38 146
Msa0088510 AT2G35740.1 30.504 377 223 12 20 382 24 375 9.64e-38 146
Msa0088510 AT1G08920.2 26.050 476 313 9 15 483 25 468 1.46e-36 142
Msa0088510 AT3G05400.2 27.292 480 283 14 11 483 15 435 1.97e-36 140
Msa0088510 AT1G08900.4 30.663 362 232 6 85 442 67 413 2.32e-36 140
Msa0088510 AT1G08920.3 26.471 442 287 9 15 453 25 431 5.44e-35 137
Msa0088510 AT1G54730.3 25.581 430 284 7 28 455 38 433 2.64e-34 134
Msa0088510 AT4G04760.3 29.610 385 253 7 104 483 33 404 3.21e-34 134
Msa0088510 AT4G04760.1 29.610 385 253 7 104 483 92 463 6.28e-34 134
Msa0088510 AT4G04750.1 26.702 382 263 6 106 483 99 467 2.33e-33 132
Msa0088510 AT4G04750.2 26.702 382 263 6 106 483 99 467 2.33e-33 132
Msa0088510 AT4G04750.3 26.702 382 263 6 106 483 143 511 2.61e-33 133
Msa0088510 AT1G54730.5 26.781 407 262 8 83 487 72 444 3.34e-32 129
Msa0088510 AT1G67300.2 24.717 441 318 7 46 483 57 486 7.82e-32 128
Msa0088510 AT1G79820.2 26.351 444 304 9 46 483 60 486 2.29e-31 127
Msa0088510 AT1G79820.1 26.351 444 304 9 46 483 60 486 2.29e-31 127
Msa0088510 AT5G27360.4 25.962 416 265 9 10 420 24 401 2.60e-31 126
Msa0088510 AT1G67300.6 24.752 404 286 8 46 446 57 445 3.41e-31 126
Msa0088510 AT1G67300.7 24.752 404 286 8 46 446 57 445 3.41e-31 126
Msa0088510 AT1G67300.1 24.605 443 315 9 46 483 57 485 7.91e-31 125
Msa0088510 AT1G67300.3 24.605 443 315 9 46 483 57 485 7.91e-31 125
Msa0088510 AT1G67300.4 25.330 379 267 7 46 421 57 422 1.50e-30 124
Msa0088510 AT1G67300.5 25.330 379 267 7 46 421 57 422 1.50e-30 124
Msa0088510 AT1G79820.4 26.154 390 272 7 46 433 60 435 3.66e-30 123
Msa0088510 AT1G54730.9 26.700 397 253 9 28 421 38 399 1.98e-29 120
Msa0088510 AT1G54730.7 26.700 397 253 9 28 421 38 399 1.98e-29 120
Msa0088510 AT2G48020.4 28.707 317 209 5 83 397 68 369 4.81e-28 115
Msa0088510 AT4G04760.2 27.877 391 249 8 104 483 92 460 7.66e-28 117
Msa0088510 AT1G54730.4 26.400 375 240 8 83 455 72 412 8.24e-28 115
Msa0088510 AT1G54730.11 27.523 327 204 6 28 352 38 333 1.57e-26 110
Msa0088510 AT3G05155.2 25.656 343 219 8 12 352 17 325 4.48e-26 109
Msa0088510 AT2G48020.3 29.412 272 180 4 83 352 68 329 3.94e-25 107
Msa0088510 AT5G17010.2 25.153 489 246 12 23 486 45 438 6.83e-25 107
Msa0088510 AT3G20460.1 23.762 404 291 6 83 483 93 482 3.24e-24 106
Msa0088510 AT1G54730.10 26.910 301 190 5 28 326 38 310 1.95e-23 101
Msa0088510 AT1G54730.6 26.910 301 190 5 28 326 38 310 1.95e-23 101
Msa0088510 AT1G54730.8 25.513 341 218 7 83 421 72 378 5.45e-23 101
Msa0088510 AT1G79820.3 24.099 444 266 10 46 483 60 438 1.05e-18 89.4
Msa0088510 AT3G51490.3 30.601 183 124 3 88 269 2 182 4.75e-18 88.2
Msa0088510 AT3G51490.3 27.126 247 145 9 260 485 436 668 1.57e-14 77.0
Msa0088510 AT3G51490.1 30.601 183 124 3 88 269 52 232 5.56e-18 87.8
Msa0088510 AT3G51490.1 25.911 247 140 10 260 485 486 710 9.25e-11 65.1
Msa0088510 AT3G51490.2 30.601 183 124 3 88 269 52 232 5.76e-18 87.8
Msa0088510 AT3G51490.2 27.126 247 145 9 260 485 486 718 1.69e-14 77.0
Msa0088510 AT1G20840.2 33.000 200 123 6 77 267 31 228 1.00e-16 84.0
Msa0088510 AT1G20840.1 33.000 200 123 6 77 267 31 228 1.00e-16 84.0
Msa0088510 AT1G79820.5 24.224 322 183 6 126 446 77 338 1.76e-15 79.0
Msa0088510 AT4G35300.4 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.4 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.8 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.8 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.6 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.6 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.11 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.11 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.1 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.1 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.10 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.10 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.7 29.012 162 113 2 107 267 70 230 4.92e-14 75.5
Msa0088510 AT4G35300.7 26.000 250 156 7 257 485 483 724 1.99e-11 67.0
Msa0088510 AT4G35300.9 29.012 162 113 2 107 267 70 230 5.52e-14 75.5
Msa0088510 AT4G35300.9 26.000 250 156 7 257 485 473 714 2.06e-11 67.0
Msa0088510 AT4G35300.2 29.012 162 113 2 107 267 70 230 5.52e-14 75.5
Msa0088510 AT4G35300.2 26.000 250 156 7 257 485 473 714 2.06e-11 67.0
Msa0088510 AT4G35300.3 29.012 162 113 2 107 267 70 230 5.52e-14 75.5
Msa0088510 AT4G35300.3 26.000 250 156 7 257 485 473 714 2.06e-11 67.0
Msa0088510 AT4G35300.5 26.000 250 156 7 257 485 286 527 2.62e-11 66.6

Find 131 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAGTTTC+AGG 0.113291 1_2:+69594909 Msa0088510:CDS
ATTCACTTCATCATTGTATT+TGG 0.179815 1_2:+69595323 Msa0088510:CDS
CTTTACTCTGCTGTGATTAC+TGG 0.220334 1_2:+69599060 Msa0088510:CDS
CCAGCATTACTCCTCACTTT+AGG 0.220398 1_2:+69598426 Msa0088510:CDS
CCACGTTCAATGAGACTATT+TGG 0.243632 1_2:-69598471 None:intergenic
CAGCATTACTCCTCACTTTA+GGG 0.249351 1_2:+69598427 Msa0088510:CDS
AATATATTCGGTTGATAAAC+TGG 0.252057 1_2:+69599113 Msa0088510:CDS
GTCTTACTTGGCTGTGGAAT+TGG 0.261288 1_2:+69595492 Msa0088510:CDS
TGTCATTTCCATTGCCCTAA+TGG 0.296156 1_2:+69598647 Msa0088510:CDS
ATGCTTTGTTATTTCAAGTT+TGG 0.300180 1_2:+69599432 Msa0088510:CDS
TGTGGAAGCAGCATTGGTTT+TGG 0.334417 1_2:+69599559 Msa0088510:CDS
CTCTGTGTCATCTCTTCAAT+AGG 0.338403 1_2:-69599534 None:intergenic
CATTATCATTTCATGCATAA+TGG 0.342417 1_2:+69594863 Msa0088510:CDS
TTGGGGTTGGAGGATATCTC+TGG 0.356303 1_2:+69598389 Msa0088510:CDS
CCAGTTCTGTTCAACACATT+GGG 0.363609 1_2:+69599018 Msa0088510:CDS
GGTCATGGGGTCCACTTGCT+TGG 0.367069 1_2:+69599301 Msa0088510:CDS
ATAGGGACATTCTTTGTCTC+AGG 0.372635 1_2:-69599516 None:intergenic
AACGATAGTCTCAATATATT+CGG 0.386732 1_2:+69599101 Msa0088510:CDS
CTTATGTTTGGTTATGATGT+TGG 0.388237 1_2:+69594900 Msa0088510:CDS
CACGTTCAATGAGACTATTT+GGG 0.388376 1_2:-69598470 None:intergenic
GCCACCGGAGGTCTTATGTT+TGG 0.389666 1_2:+69594888 Msa0088510:CDS
ATTGTATTTGGCGGGTTTAA+CGG 0.394528 1_2:+69595335 Msa0088510:CDS
TTTCAGCTTGATATCACTCT+TGG 0.399756 1_2:+69597513 Msa0088510:CDS
TGGAGGATATCTCTGGGATT+GGG 0.399827 1_2:+69598396 Msa0088510:CDS
CACTTCATCATTGTATTTGG+CGG 0.400462 1_2:+69595326 Msa0088510:CDS
TAACAGAATCAAAGGTCATT+GGG 0.402246 1_2:+69598371 Msa0088510:intron
CCCAATGTGTTGAACAGAAC+TGG 0.402584 1_2:-69599018 None:intergenic
GCAATCTCTGAAAGGAAAAC+TGG 0.403056 1_2:-69597456 None:intergenic
TTGGAGGATATCTCTGGGAT+TGG 0.417371 1_2:+69598395 Msa0088510:CDS
AACTGGAGCATAGAACATTA+TGG 0.417549 1_2:-69599001 None:intergenic
AATGCTCCACGTATTCTTGA+AGG 0.430135 1_2:-69597480 None:intergenic
GCTGGCTTCTTCTTCATAGC+TGG 0.430415 1_2:+69595417 Msa0088510:CDS
ATGCATGAAATGATAATGAT+AGG 0.430983 1_2:-69594858 None:intergenic
AAGATTAGTACAAACCATTA+GGG 0.436585 1_2:-69598661 None:intergenic
TGTCAGCATTTGCATGGTCA+TGG 0.444330 1_2:+69599286 Msa0088510:CDS
TCTTATACAACTCGAGTACT+AGG 0.451742 1_2:+69595372 Msa0088510:CDS
ATCGTTGGTAGGGTCTTACT+TGG 0.458508 1_2:+69595480 Msa0088510:CDS
CCACTAGAGACTCGTTCTGC+AGG 0.462076 1_2:+69599345 Msa0088510:CDS
GTCAGCATTTGCATGGTCAT+GGG 0.464567 1_2:+69599287 Msa0088510:CDS
TCAAATGTTCTTGTCACAAA+TGG 0.472443 1_2:+69599167 Msa0088510:CDS
ATAACAGAATCAAAGGTCAT+TGG 0.475393 1_2:+69598370 Msa0088510:intron
AGAGAGTGTGGAAGCAGCAT+TGG 0.481898 1_2:+69599553 Msa0088510:CDS
CAGATATTTCAGCAATTCAC+TGG 0.497047 1_2:+69598970 Msa0088510:intron
ATAAGGAACTTACTTGTTGG+TGG 0.500032 1_2:-69597565 None:intergenic
GAACGTGGTCACTTGGACAA+AGG 0.500261 1_2:+69598486 Msa0088510:CDS
TCCAGTTCTGTTCAACACAT+TGG 0.500531 1_2:+69599017 Msa0088510:CDS
GGCAAGTCGTGTTGCTAAAG+AGG 0.500547 1_2:+69598575 Msa0088510:CDS
GAATCAAAGGTCATTGGGGT+TGG 0.506170 1_2:+69598376 Msa0088510:intron
CGGCAACGACAGAGAATTTG+AGG 0.506930 1_2:+69594824 Msa0088510:CDS
ACTTCATCATTGTATTTGGC+GGG 0.508139 1_2:+69595327 Msa0088510:CDS
GGTAGGGTCTTACTTGGCTG+TGG 0.508697 1_2:+69595486 Msa0088510:CDS
TCTGTGTCATCTCTTCAATA+GGG 0.513178 1_2:-69599533 None:intergenic
TGGAAAGAACTTCTTCAAGA+AGG 0.515645 1_2:-69595223 None:intergenic
CCTAAAGTGAGGAGTAATGC+TGG 0.516671 1_2:-69598426 None:intergenic
TCAAAGGTCATTGGGGTTGG+AGG 0.518817 1_2:+69598379 Msa0088510:CDS
CTTTCGAGAGTTCCTCAGAA+TGG 0.520137 1_2:-69599224 None:intergenic
AGTTGTATAAGACGCGAAGA+AGG 0.523063 1_2:-69595361 None:intergenic
TTTAGGGGCTTACTTAGTAG+TGG 0.523678 1_2:+69598443 Msa0088510:CDS
CTTGAAGAAGTTCTTTCCAA+CGG 0.529312 1_2:+69595227 Msa0088510:CDS
TCTCATTGAACGTGGTCACT+TGG 0.531256 1_2:+69598479 Msa0088510:CDS
TTCTCATGCTCATCGTTGGT+AGG 0.531973 1_2:+69595469 Msa0088510:CDS
AGACAGACGACGGAATCAGA+TGG 0.534245 1_2:+69595255 Msa0088510:CDS
CATTCTTTGTCTCAGGGACA+AGG 0.534348 1_2:-69599509 None:intergenic
AAGAGATGACACAGAGAGTG+TGG 0.538985 1_2:+69599541 Msa0088510:CDS
GAGACAAGATCATTTCTGCC+AGG 0.539287 1_2:-69599639 None:intergenic
TCTAGTGGAAATATCTCACT+TGG 0.540947 1_2:-69599330 None:intergenic
TGGAATTGGATTTGCAAACC+AGG 0.541646 1_2:+69595506 Msa0088510:CDS
TAATTAACCATGACGGGAGG+AGG 0.541762 1_2:+69594792 None:intergenic
TGCAGCTCTTGTAGTTGTGA+TGG 0.545486 1_2:+69599251 Msa0088510:CDS
TGGGGTTGGAGGATATCTCT+GGG 0.548277 1_2:+69598390 Msa0088510:CDS
TGAAATAACAAAGCATTGAA+AGG 0.549846 1_2:-69599425 None:intergenic
GGAAAGAACTTCTTCAAGAA+GGG 0.551194 1_2:-69595222 None:intergenic
AGGCTCACAATGTTGATCGC+TGG 0.555620 1_2:+69595399 Msa0088510:CDS
CACTAGAGACTCGTTCTGCA+GGG 0.555738 1_2:+69599346 Msa0088510:CDS
AGCATTACTCCTCACTTTAG+GGG 0.556506 1_2:+69598428 Msa0088510:CDS
TCTCATGCTCATCGTTGGTA+GGG 0.559362 1_2:+69595470 Msa0088510:CDS
AACCTTCTCATGCTCATCGT+TGG 0.561672 1_2:+69595465 Msa0088510:CDS
GTCGTCTGTCTCAAGACCGT+TGG 0.563013 1_2:-69595243 None:intergenic
GCTGAAGCCTCCTCCCGTCA+TGG 0.565815 1_2:-69594799 None:intergenic
TTGAAGGTGCAATCTCTGAA+AGG 0.568570 1_2:-69597464 None:intergenic
AGACAAGATCATTTCTGCCA+GGG 0.570266 1_2:-69599638 None:intergenic
TGCATAATGGCTGCCACCGG+AGG 0.573918 1_2:+69594876 Msa0088510:CDS
GAGGTCGGTTATTGCGCTTG+AGG 0.575455 1_2:-69598620 None:intergenic
CGAAAGCTATTACTCGAAGC+TGG 0.575954 1_2:+69599141 Msa0088510:CDS
CAACTCGAGTACTAGGAAGA+AGG 0.577102 1_2:+69595379 Msa0088510:CDS
AGTACAAACCATTAGGGCAA+TGG 0.580130 1_2:-69598655 None:intergenic
ATGACGGGAGGAGGCTTCAG+CGG 0.582980 1_2:+69594801 Msa0088510:CDS
GCTGTTCTGAGAAAGATTCG+TGG 0.584754 1_2:+69598513 Msa0088510:CDS
ACGGGAGGAGGCTTCAGCGG+CGG 0.586483 1_2:+69594804 Msa0088510:CDS
GTGCAATGACAGCAGTGAAG+AGG 0.587387 1_2:-69599395 None:intergenic
CGCTTGAGGAGATTTCTGAA+CGG 0.588562 1_2:-69598606 None:intergenic
TAGGGACATTCTTTGTCTCA+GGG 0.588827 1_2:-69599515 None:intergenic
TCATGCATAATGGCTGCCAC+CGG 0.589627 1_2:+69594873 Msa0088510:CDS
CTAAAGTGAGGAGTAATGCT+GGG 0.591713 1_2:-69598425 None:intergenic
ATGGTGATAGCAATTGTACT+AGG 0.593741 1_2:+69599186 Msa0088510:CDS
ATTCTGAGGAACTCTCGAAA+GGG 0.594512 1_2:+69599226 Msa0088510:CDS
CATTCTGAGGAACTCTCGAA+AGG 0.596408 1_2:+69599225 Msa0088510:CDS
GACAGACGACGGAATCAGAT+GGG 0.599473 1_2:+69595256 Msa0088510:CDS
CTCTGAAAGGAAAACTGGCA+CGG 0.599482 1_2:-69597451 None:intergenic
CCTGCAGAACGAGTCTCTAG+TGG 0.601195 1_2:-69599345 None:intergenic
TCTTTGCATAACAGAATCAA+AGG 0.602087 1_2:+69598363 Msa0088510:intron
AAGTGAATAGCTGCAACCCT+TGG 0.602447 1_2:-69595308 None:intergenic
ATATATTCGGTTGATAAACT+GGG 0.603944 1_2:+69599114 Msa0088510:CDS
GTACATGGTGGAAATTCCCC+TGG 0.608228 1_2:+69599621 Msa0088510:CDS
ATAACCAAACATAAGACCTC+CGG 0.610933 1_2:-69594892 None:intergenic
TGTTGGTGGCATAGTTGACA+AGG 0.611158 1_2:-69597551 None:intergenic
AGGATATCTCTGGGATTGGG+AGG 0.614479 1_2:+69598399 Msa0088510:CDS
TGAGTTCTTAGAGTTAGTAG+AGG 0.615275 1_2:+69598554 Msa0088510:CDS
TCAGCATTTGCATGGTCATG+GGG 0.621192 1_2:+69599288 Msa0088510:CDS
ATTGAAGATGAGAAAGTACA+TGG 0.621432 1_2:+69599606 Msa0088510:CDS
GACAAGATCATTTCTGCCAG+GGG 0.621853 1_2:-69599637 None:intergenic
CTAAGTAAGCCCCTAAAGTG+AGG 0.625282 1_2:-69598437 None:intergenic
CAAAGTGAAGGACCATTCTG+AGG 0.625954 1_2:+69599212 Msa0088510:CDS
TCTACTAACTCTAAGAACTC+AGG 0.628704 1_2:-69598552 None:intergenic
GCAATGGAAATGACAAGTTG+AGG 0.629289 1_2:-69598639 None:intergenic
TACTGCAAATACGATAACCA+AGG 0.630998 1_2:+69595291 Msa0088510:CDS
AAGAACTTCTTCAAGAAGGG+TGG 0.634008 1_2:-69595219 None:intergenic
TCTGAGAAAGATTCGTGGCA+CGG 0.641034 1_2:+69598518 Msa0088510:CDS
TGTACTAGGAATCAAAGTGA+AGG 0.642063 1_2:+69599200 Msa0088510:CDS
TGGAAATGACAAGTTGAGGT+CGG 0.646516 1_2:-69598635 None:intergenic
ACGTTCAATGAGACTATTTG+GGG 0.648447 1_2:-69598469 None:intergenic
ACTGCAAATACGATAACCAA+GGG 0.652200 1_2:+69595292 Msa0088510:CDS
TACCAACGATGAGCATGAGA+AGG 0.652678 1_2:-69595467 None:intergenic
CTTGGAATAAGCCAAGCAAG+TGG 0.653091 1_2:-69599312 None:intergenic
AACAGAATCAAAGGTCATTG+GGG 0.657099 1_2:+69598372 Msa0088510:intron
CCAAATAGTCTCATTGAACG+TGG 0.670098 1_2:+69598471 Msa0088510:CDS
ACCAAACATAAGACCTCCGG+TGG 0.683703 1_2:-69594889 None:intergenic
AAATAATTAACCATGACGGG+AGG 0.694207 1_2:+69594789 None:intergenic
GAAGATGAGAAAGTACATGG+TGG 0.696620 1_2:+69599609 Msa0088510:CDS
ATTGCACCTTCAAGAATACG+TGG 0.700035 1_2:+69597474 Msa0088510:CDS
AACGGTCTTGAGACAGACGA+CGG 0.737114 1_2:+69595245 Msa0088510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATATTTTAATT+CGG - chr1_2:69597926-69597945 None:intergenic 0.0%
!!! ATTTTATTTTATATTTTTAT+AGG + chr1_2:69598154-69598173 Msa0088510:intron 0.0%
!!! AATTAGAATTATATTTTTGA+AGG - chr1_2:69595016-69595035 None:intergenic 10.0%
!!! TATAAGTTAAATTTTGTTTT+GGG - chr1_2:69596530-69596549 None:intergenic 10.0%
!!! TTATAAGTTAAATTTTGTTT+TGG - chr1_2:69596531-69596550 None:intergenic 10.0%
!!! AACTTTTTTTTTTTTTTTGA+GGG - chr1_2:69597227-69597246 None:intergenic 10.0%
!! CCAAAAAAAAAAAAATAAAA+GGG - chr1_2:69597791-69597810 None:intergenic 10.0%
!! ACCAAAAAAAAAAAAATAAA+AGG - chr1_2:69597792-69597811 None:intergenic 10.0%
!! AACTATTGAAATAATTAAAA+GGG - chr1_2:69597823-69597842 None:intergenic 10.0%
!! TAACTATTGAAATAATTAAA+AGG - chr1_2:69597824-69597843 None:intergenic 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG + chr1_2:69597956-69597975 Msa0088510:intron 10.0%
!!! TTTATAGTACTATTTTCTTA+TGG + chr1_2:69595071-69595090 Msa0088510:intron 15.0%
!!! ATTCATAAATTTTATGTAGT+GGG - chr1_2:69595626-69595645 None:intergenic 15.0%
!!! GATATTTATTTTGAAATTGA+AGG - chr1_2:69595663-69595682 None:intergenic 15.0%
!!! ATTTCACATTTTAAATACAA+TGG + chr1_2:69595754-69595773 Msa0088510:intron 15.0%
!!! ATAATTTCACATATTTTACA+TGG + chr1_2:69595790-69595809 Msa0088510:intron 15.0%
!! ATAGCAAAATTTGTATTTAT+TGG + chr1_2:69596615-69596634 Msa0088510:intron 15.0%
!! AAATAATATAAAGATTTCCT+TGG + chr1_2:69596960-69596979 Msa0088510:intron 15.0%
!! AATAATATAAAGATTTCCTT+GGG + chr1_2:69596961-69596980 Msa0088510:intron 15.0%
!! ATAAATAAATAAAGGTTTCT+TGG + chr1_2:69596995-69597014 Msa0088510:intron 15.0%
!!! GAACTTTTTTTTTTTTTTTG+AGG - chr1_2:69597228-69597247 None:intergenic 15.0%
!!! AATTGATTTCACATTTATTT+TGG + chr1_2:69597696-69597715 Msa0088510:intron 15.0%
!!! CCCTTTTATTTTTTTTTTTT+TGG + chr1_2:69597788-69597807 Msa0088510:intron 15.0%
!! TTCTATATTAAGAATTTCTT+TGG - chr1_2:69598232-69598251 None:intergenic 15.0%
!! TCAATAAAAGGTTATAAAAA+GGG - chr1_2:69598871-69598890 None:intergenic 15.0%
!! ATCAATAAAAGGTTATAAAA+AGG - chr1_2:69598872-69598891 None:intergenic 15.0%
!! TAACAAAACATATCTTATGA+TGG + chr1_2:69595151-69595170 Msa0088510:intron 20.0%
!!! TGGTTGATTTAATTGTTTTA+AGG + chr1_2:69595180-69595199 Msa0088510:intron 20.0%
!!! TTGATTTAATTGTTTTAAGG+CGG + chr1_2:69595183-69595202 Msa0088510:intron 20.0%
!!! GATTCATAAATTTTATGTAG+TGG - chr1_2:69595627-69595646 None:intergenic 20.0%
!!! TTTACATGGATTTTTAAAGT+TGG + chr1_2:69595804-69595823 Msa0088510:intron 20.0%
!!! TAGGTTTTGTAATTTTTATC+AGG + chr1_2:69595980-69595999 Msa0088510:intron 20.0%
!!! ACAAAAATTATAGTCACTTT+AGG + chr1_2:69596657-69596676 Msa0088510:intron 20.0%
!!! AATTACTTTTATCTTACGAT+TGG - chr1_2:69596764-69596783 None:intergenic 20.0%
!! GGTATAGATATAATAATCTA+AGG + chr1_2:69596858-69596877 Msa0088510:intron 20.0%
!!! TCTTATTTTAGTCATAACTT+TGG + chr1_2:69597269-69597288 Msa0088510:intron 20.0%
!! TGACATATTAGTTCATTAAT+TGG + chr1_2:69597610-69597629 Msa0088510:intron 20.0%
!! TTATATAAAAGTCTAACACA+GGG + chr1_2:69597719-69597738 Msa0088510:intron 20.0%
!!! ACAATTTTATTGTTTTATCC+AGG - chr1_2:69597767-69597786 None:intergenic 20.0%
!!! AAGCATATGTGTTATAATTT+TGG - chr1_2:69598188-69598207 None:intergenic 20.0%
!! ATAATTCAGCTATCAATAAA+AGG - chr1_2:69598883-69598902 None:intergenic 20.0%
!! ATGCATGAAATGATAATGAT+AGG - chr1_2:69594861-69594880 None:intergenic 25.0%
! CATTATCATTTCATGCATAA+TGG + chr1_2:69594863-69594882 Msa0088510:CDS 25.0%
! TTCAAACCTTAATATGTGTT+TGG + chr1_2:69594985-69595004 Msa0088510:intron 25.0%
!! TACTATTTTCTTATGGAAAG+TGG + chr1_2:69595078-69595097 Msa0088510:intron 25.0%
!!! ATATCTTATGATGGATGATA+TGG + chr1_2:69595160-69595179 Msa0088510:intron 25.0%
! ATTCACTTCATCATTGTATT+TGG + chr1_2:69595323-69595342 Msa0088510:CDS 25.0%
! AAAATCAAATTACACTAACC+TGG - chr1_2:69595527-69595546 None:intergenic 25.0%
!!! TATTTATTTTTTGTGCGACA+TGG - chr1_2:69595571-69595590 None:intergenic 25.0%
!! CTAAGTGTAACAATTTTACA+TGG + chr1_2:69595715-69595734 Msa0088510:intron 25.0%
! TGGATCGAAAAAAAAATACA+TGG + chr1_2:69595824-69595843 Msa0088510:intron 25.0%
!!! TGCTAACTTTTTCATCTAAT+TGG + chr1_2:69596502-69596521 Msa0088510:intron 25.0%
! TGAAAACATTCATAAATCAC+AGG + chr1_2:69596571-69596590 Msa0088510:intron 25.0%
!! TCACTTTAGGAAAAACAAAA+AGG + chr1_2:69596670-69596689 Msa0088510:intron 25.0%
! TATCCTAAACTTTCAATCAA+TGG + chr1_2:69596837-69596856 Msa0088510:intron 25.0%
!! ATACCATTGATTGAAAGTTT+AGG - chr1_2:69596843-69596862 None:intergenic 25.0%
!!! ACCAAAAGGTTTTAAAAGTT+CGG - chr1_2:69596930-69596949 None:intergenic 25.0%
!!! TTTATTTTTACAAAGTCCCA+AGG - chr1_2:69596980-69596999 None:intergenic 25.0%
! AGTATTACTTAAGGAATCAA+AGG - chr1_2:69597301-69597320 None:intergenic 25.0%
!!! AGTCACTAATATTGTTTTGA+TGG + chr1_2:69597421-69597440 Msa0088510:intron 25.0%
! ATTATAAGGAACTTACTTGT+TGG - chr1_2:69597571-69597590 None:intergenic 25.0%
! AAGGATGCAATACAATTATA+AGG - chr1_2:69597585-69597604 None:intergenic 25.0%
! GAACTAATATGTCAAACAAA+AGG - chr1_2:69597604-69597623 None:intergenic 25.0%
! GTTATATAAAAGTCTAACAC+AGG + chr1_2:69597718-69597737 Msa0088510:intron 25.0%
!! ACTATTTGTCTAGAGTAAAT+TGG - chr1_2:69598298-69598317 None:intergenic 25.0%
! AAGATTAGTACAAACCATTA+GGG - chr1_2:69598664-69598683 None:intergenic 25.0%
! TAAGATTAGTACAAACCATT+AGG - chr1_2:69598665-69598684 None:intergenic 25.0%
!! TATTTTCGCTATTGCAATTA+GGG - chr1_2:69598810-69598829 None:intergenic 25.0%
!! TTATTTTCGCTATTGCAATT+AGG - chr1_2:69598811-69598830 None:intergenic 25.0%
! AATAAAAAACTAAGATGTCG+CGG + chr1_2:69598826-69598845 Msa0088510:intron 25.0%
! TTTGAGCAACATTAATGAAA+AGG - chr1_2:69598937-69598956 None:intergenic 25.0%
! TCATTAATGTTGCTCAAATA+TGG + chr1_2:69598939-69598958 Msa0088510:intron 25.0%
! AACGATAGTCTCAATATATT+CGG + chr1_2:69599101-69599120 Msa0088510:CDS 25.0%
!!! AATATATTCGGTTGATAAAC+TGG + chr1_2:69599113-69599132 Msa0088510:CDS 25.0%
!!! ATATATTCGGTTGATAAACT+GGG + chr1_2:69599114-69599133 Msa0088510:CDS 25.0%
!!! TGAAATAACAAAGCATTGAA+AGG - chr1_2:69599428-69599447 None:intergenic 25.0%
!!! ATGCTTTGTTATTTCAAGTT+TGG + chr1_2:69599432-69599451 Msa0088510:CDS 25.0%
CTTATGTTTGGTTATGATGT+TGG + chr1_2:69594900-69594919 Msa0088510:CDS 30.0%
GAAAGAAGTTAGCATTCATT+AGG - chr1_2:69594937-69594956 None:intergenic 30.0%
AACCTTAATATGTGTTTGGT+CGG + chr1_2:69594989-69595008 Msa0088510:intron 30.0%
TACTCTTACACTAGTGAAAT+TGG - chr1_2:69595110-69595129 None:intergenic 30.0%
!! TGAAATTGAAGGAGTATTAG+TGG - chr1_2:69595652-69595671 None:intergenic 30.0%
CATCATTAGGAGACAAAAAT+AGG + chr1_2:69595961-69595980 Msa0088510:intron 30.0%
TACTGTTGTGTGTATATACT+AGG + chr1_2:69596029-69596048 Msa0088510:intron 30.0%
!! ACTAGGAGAAATGTTTTTGA+TGG + chr1_2:69596046-69596065 Msa0088510:intron 30.0%
TTGGACTTATGCTAATAGTA+AGG + chr1_2:69596634-69596653 Msa0088510:intron 30.0%
AGAAAAAGAATGATGCATAG+TGG + chr1_2:69596901-69596920 Msa0088510:intron 30.0%
!!! GAACTTTTAAAACCTTTTGG+TGG + chr1_2:69596929-69596948 Msa0088510:intron 30.0%
AGAATACTTTCATGCCAAAA+AGG - chr1_2:69597065-69597084 None:intergenic 30.0%
!!! TTTTTTGAGGGAACAATGAA+TGG - chr1_2:69597215-69597234 None:intergenic 30.0%
ATAGAGATAGCTACAATGAA+TGG - chr1_2:69597250-69597269 None:intergenic 30.0%
GTAGCATACAGTATTACTTA+AGG - chr1_2:69597310-69597329 None:intergenic 30.0%
TCACACTTTGTGATAACAAT+TGG + chr1_2:69597390-69597409 Msa0088510:intron 30.0%
!!! TTGTGATAACAATTGGCTTT+TGG + chr1_2:69597397-69597416 Msa0088510:intron 30.0%
!!! AATATTGTTTTGATGGAGAC+AGG + chr1_2:69597428-69597447 Msa0088510:intron 30.0%
GCTAAAAATTCGAGAATTGT+GGG + chr1_2:69598072-69598091 Msa0088510:intron 30.0%
! ACGCATACATTTTATATGCT+CGG - chr1_2:69598111-69598130 None:intergenic 30.0%
TCTTTGCATAACAGAATCAA+AGG + chr1_2:69598363-69598382 Msa0088510:intron 30.0%
ATAACAGAATCAAAGGTCAT+TGG + chr1_2:69598370-69598389 Msa0088510:intron 30.0%
TAACAGAATCAAAGGTCATT+GGG + chr1_2:69598371-69598390 Msa0088510:intron 30.0%
CATAGATAATATGATAGCCA+AGG + chr1_2:69598703-69598722 Msa0088510:intron 30.0%
!!! ATAGCCAAGGTTTTAATTCA+TGG + chr1_2:69598716-69598735 Msa0088510:intron 30.0%
TCAAATGTTCTTGTCACAAA+TGG + chr1_2:69599167-69599186 Msa0088510:CDS 30.0%
! ATTGAAGATGAGAAAGTACA+TGG + chr1_2:69599606-69599625 Msa0088510:CDS 30.0%
ATAACCAAACATAAGACCTC+CGG - chr1_2:69594895-69594914 None:intergenic 35.0%
!!! TTAATTGTTTTAAGGCGGTG+TGG + chr1_2:69595188-69595207 Msa0088510:intron 35.0%
GGAAAGAACTTCTTCAAGAA+GGG - chr1_2:69595225-69595244 None:intergenic 35.0%
TGGAAAGAACTTCTTCAAGA+AGG - chr1_2:69595226-69595245 None:intergenic 35.0%
CTTGAAGAAGTTCTTTCCAA+CGG + chr1_2:69595227-69595246 Msa0088510:CDS 35.0%
TACTGCAAATACGATAACCA+AGG + chr1_2:69595291-69595310 Msa0088510:CDS 35.0%
ACTGCAAATACGATAACCAA+GGG + chr1_2:69595292-69595311 Msa0088510:CDS 35.0%
CACTTCATCATTGTATTTGG+CGG + chr1_2:69595326-69595345 Msa0088510:CDS 35.0%
ACTTCATCATTGTATTTGGC+GGG + chr1_2:69595327-69595346 Msa0088510:CDS 35.0%
!! ATTGTATTTGGCGGGTTTAA+CGG + chr1_2:69595335-69595354 Msa0088510:CDS 35.0%
TCTTATACAACTCGAGTACT+AGG + chr1_2:69595372-69595391 Msa0088510:CDS 35.0%
!! ATTTGATTTTGCTCTCCCTT+AGG + chr1_2:69595537-69595556 Msa0088510:intron 35.0%
GACATGGTTAGATAACCTAA+GGG - chr1_2:69595555-69595574 None:intergenic 35.0%
! GATGTCTCCATGGATTTTAA+CGG + chr1_2:69595871-69595890 Msa0088510:intron 35.0%
ATTGCATCCGTTAAAATCCA+TGG - chr1_2:69595881-69595900 None:intergenic 35.0%
AGATCCTTGTGTACATCATT+AGG + chr1_2:69595948-69595967 Msa0088510:intron 35.0%
!!! GCCGAACTTTTAAAACCTTT+TGG + chr1_2:69596926-69596945 Msa0088510:intron 35.0%
! ATTTGTTAGTTGCCACCAAA+AGG - chr1_2:69596944-69596963 None:intergenic 35.0%
GACTGATTAAGACTTTGTGT+GGG - chr1_2:69597023-69597042 None:intergenic 35.0%
AGACTGATTAAGACTTTGTG+TGG - chr1_2:69597024-69597043 None:intergenic 35.0%
! CAACACTATATCCACCTTTT+TGG + chr1_2:69597048-69597067 Msa0088510:intron 35.0%
ATACTTTCATGCCAAAAAGG+TGG - chr1_2:69597062-69597081 None:intergenic 35.0%
AAATGAAATCATGCCCAAAG+TGG - chr1_2:69597127-69597146 None:intergenic 35.0%
! CTACAAACGATACACGATTT+TGG + chr1_2:69597326-69597345 Msa0088510:intron 35.0%
TTTCAGCTTGATATCACTCT+TGG + chr1_2:69597513-69597532 Msa0088510:CDS 35.0%
! ATAAGGAACTTACTTGTTGG+TGG - chr1_2:69597568-69597587 None:intergenic 35.0%
ATAAAAGTCTAACACAGGGT+CGG + chr1_2:69597723-69597742 Msa0088510:intron 35.0%
!!! TTTTGGTGCCCCTAAAATAA+AGG + chr1_2:69597973-69597992 Msa0088510:intron 35.0%
GGCTAAAAATTCGAGAATTG+TGG + chr1_2:69598071-69598090 Msa0088510:intron 35.0%
AACAGAATCAAAGGTCATTG+GGG + chr1_2:69598372-69598391 Msa0088510:intron 35.0%
ACGTTCAATGAGACTATTTG+GGG - chr1_2:69598472-69598491 None:intergenic 35.0%
CACGTTCAATGAGACTATTT+GGG - chr1_2:69598473-69598492 None:intergenic 35.0%
! TCTACTAACTCTAAGAACTC+AGG - chr1_2:69598555-69598574 None:intergenic 35.0%
TGAGTTCTTAGAGTTAGTAG+AGG + chr1_2:69598554-69598573 Msa0088510:CDS 35.0%
GCAACCATGAATTAAAACCT+TGG - chr1_2:69598723-69598742 None:intergenic 35.0%
CAGATATTTCAGCAATTCAC+TGG + chr1_2:69598970-69598989 Msa0088510:intron 35.0%
AACTGGAGCATAGAACATTA+TGG - chr1_2:69599004-69599023 None:intergenic 35.0%
ATGGTGATAGCAATTGTACT+AGG + chr1_2:69599186-69599205 Msa0088510:CDS 35.0%
TGTACTAGGAATCAAAGTGA+AGG + chr1_2:69599200-69599219 Msa0088510:CDS 35.0%
! TTTTTGTGTCAGCATTTGCA+TGG + chr1_2:69599280-69599299 Msa0088510:CDS 35.0%
TCTAGTGGAAATATCTCACT+TGG - chr1_2:69599333-69599352 None:intergenic 35.0%
! GGTATCTTCTTTTTCTTCTC+TGG + chr1_2:69599453-69599472 Msa0088510:CDS 35.0%
! TCTTCTTTTTCTTCTCTGGT+TGG + chr1_2:69599457-69599476 Msa0088510:CDS 35.0%
TCTGTGTCATCTCTTCAATA+GGG - chr1_2:69599536-69599555 None:intergenic 35.0%
GGTTATGATGTTGGAGTTTC+AGG + chr1_2:69594909-69594928 Msa0088510:CDS 40.0%
GACCGACCAAACACATATTA+AGG - chr1_2:69594994-69595013 None:intergenic 40.0%
AAGAACTTCTTCAAGAAGGG+TGG - chr1_2:69595222-69595241 None:intergenic 40.0%
AGTTGTATAAGACGCGAAGA+AGG - chr1_2:69595364-69595383 None:intergenic 40.0%
TGGAATTGGATTTGCAAACC+AGG + chr1_2:69595506-69595525 Msa0088510:CDS 40.0%
CGACATGGTTAGATAACCTA+AGG - chr1_2:69595556-69595575 None:intergenic 40.0%
GTCTCCTAATGATGTACACA+AGG - chr1_2:69595955-69595974 None:intergenic 40.0%
TTATGAGTCATGACACTTGC+TGG + chr1_2:69597098-69597117 Msa0088510:intron 40.0%
! GCAATCTCTGAAAGGAAAAC+TGG - chr1_2:69597459-69597478 None:intergenic 40.0%
! TTGAAGGTGCAATCTCTGAA+AGG - chr1_2:69597467-69597486 None:intergenic 40.0%
ATTGCACCTTCAAGAATACG+TGG + chr1_2:69597474-69597493 Msa0088510:CDS 40.0%
AATGCTCCACGTATTCTTGA+AGG - chr1_2:69597483-69597502 None:intergenic 40.0%
!!! TCCTAAGATTTTTGGTGTCC+TGG + chr1_2:69597746-69597765 Msa0088510:intron 40.0%
TCCAGGACACCAAAAATCTT+AGG - chr1_2:69597750-69597769 None:intergenic 40.0%
AGAGTTTCGTTGTTAGACCA+GGG - chr1_2:69598040-69598059 None:intergenic 40.0%
AAGAGTTTCGTTGTTAGACC+AGG - chr1_2:69598041-69598060 None:intergenic 40.0%
ACGAAACTCTTGCACACTAA+AGG + chr1_2:69598050-69598069 Msa0088510:intron 40.0%
CTAAAGTGAGGAGTAATGCT+GGG - chr1_2:69598428-69598447 None:intergenic 40.0%
CAGCATTACTCCTCACTTTA+GGG + chr1_2:69598427-69598446 Msa0088510:CDS 40.0%
AGCATTACTCCTCACTTTAG+GGG + chr1_2:69598428-69598447 Msa0088510:CDS 40.0%
TTTAGGGGCTTACTTAGTAG+TGG + chr1_2:69598443-69598462 Msa0088510:CDS 40.0%
CCACGTTCAATGAGACTATT+TGG - chr1_2:69598474-69598493 None:intergenic 40.0%
CCAAATAGTCTCATTGAACG+TGG + chr1_2:69598471-69598490 Msa0088510:CDS 40.0%
! TGGAAATGACAAGTTGAGGT+CGG - chr1_2:69598638-69598657 None:intergenic 40.0%
GCAATGGAAATGACAAGTTG+AGG - chr1_2:69598642-69598661 None:intergenic 40.0%
! TGTCATTTCCATTGCCCTAA+TGG + chr1_2:69598647-69598666 Msa0088510:CDS 40.0%
AGTACAAACCATTAGGGCAA+TGG - chr1_2:69598658-69598677 None:intergenic 40.0%
TTTCGCTATTGCAATTAGGG+CGG - chr1_2:69598807-69598826 None:intergenic 40.0%
TCCAGTTCTGTTCAACACAT+TGG + chr1_2:69599017-69599036 Msa0088510:CDS 40.0%
CCAGTTCTGTTCAACACATT+GGG + chr1_2:69599018-69599037 Msa0088510:CDS 40.0%
CTTTACTCTGCTGTGATTAC+TGG + chr1_2:69599060-69599079 Msa0088510:CDS 40.0%
! ATTCTGAGGAACTCTCGAAA+GGG + chr1_2:69599226-69599245 Msa0088510:CDS 40.0%
TAGGGACATTCTTTGTCTCA+GGG - chr1_2:69599518-69599537 None:intergenic 40.0%
ATAGGGACATTCTTTGTCTC+AGG - chr1_2:69599519-69599538 None:intergenic 40.0%
CTCTGTGTCATCTCTTCAAT+AGG - chr1_2:69599537-69599556 None:intergenic 40.0%
! GAAGATGAGAAAGTACATGG+TGG + chr1_2:69599609-69599628 Msa0088510:CDS 40.0%
AGACAAGATCATTTCTGCCA+GGG - chr1_2:69599641-69599660 None:intergenic 40.0%
AAGTGAATAGCTGCAACCCT+TGG - chr1_2:69595311-69595330 None:intergenic 45.0%
CAACTCGAGTACTAGGAAGA+AGG + chr1_2:69595379-69595398 Msa0088510:CDS 45.0%
AACCTTCTCATGCTCATCGT+TGG + chr1_2:69595465-69595484 Msa0088510:CDS 45.0%
TACCAACGATGAGCATGAGA+AGG - chr1_2:69595470-69595489 None:intergenic 45.0%
TTCTCATGCTCATCGTTGGT+AGG + chr1_2:69595469-69595488 Msa0088510:CDS 45.0%
TCTCATGCTCATCGTTGGTA+GGG + chr1_2:69595470-69595489 Msa0088510:CDS 45.0%
! ATCGTTGGTAGGGTCTTACT+TGG + chr1_2:69595480-69595499 Msa0088510:CDS 45.0%
GTCTTACTTGGCTGTGGAAT+TGG + chr1_2:69595492-69595511 Msa0088510:CDS 45.0%
GTACTATTGCGATGTCTCCA+TGG + chr1_2:69595861-69595880 Msa0088510:intron 45.0%
AGAACCACGCGTTCACTAAA+AGG - chr1_2:69596714-69596733 None:intergenic 45.0%
! CTCTGAAAGGAAAACTGGCA+CGG - chr1_2:69597454-69597473 None:intergenic 45.0%
!! TGTTGGTGGCATAGTTGACA+AGG - chr1_2:69597554-69597573 None:intergenic 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG + chr1_2:69597738-69597757 Msa0088510:intron 45.0%
!!! CCAGGGCACCTTTATTTTAG+GGG - chr1_2:69597984-69598003 None:intergenic 45.0%
!!! CCCAGGGCACCTTTATTTTA+GGG - chr1_2:69597985-69598004 None:intergenic 45.0%
!! CCCTAAAATAAAGGTGCCCT+GGG + chr1_2:69597982-69598001 Msa0088510:intron 45.0%
GAGTTTCGTTGTTAGACCAG+GGG - chr1_2:69598039-69598058 None:intergenic 45.0%
GAATCAAAGGTCATTGGGGT+TGG + chr1_2:69598376-69598395 Msa0088510:intron 45.0%
!! TTGGAGGATATCTCTGGGAT+TGG + chr1_2:69598395-69598414 Msa0088510:CDS 45.0%
!! TGGAGGATATCTCTGGGATT+GGG + chr1_2:69598396-69598415 Msa0088510:CDS 45.0%
CCTAAAGTGAGGAGTAATGC+TGG - chr1_2:69598429-69598448 None:intergenic 45.0%
CCAGCATTACTCCTCACTTT+AGG + chr1_2:69598426-69598445 Msa0088510:CDS 45.0%
CTAAGTAAGCCCCTAAAGTG+AGG - chr1_2:69598440-69598459 None:intergenic 45.0%
TCTCATTGAACGTGGTCACT+TGG + chr1_2:69598479-69598498 Msa0088510:CDS 45.0%
!! GCTGTTCTGAGAAAGATTCG+TGG + chr1_2:69598513-69598532 Msa0088510:CDS 45.0%
TCTGAGAAAGATTCGTGGCA+CGG + chr1_2:69598518-69598537 Msa0088510:CDS 45.0%
CGCTTGAGGAGATTTCTGAA+CGG - chr1_2:69598609-69598628 None:intergenic 45.0%
AGGGTCTGCAATTGCAATTG+TGG - chr1_2:69598852-69598871 None:intergenic 45.0%
CCCAATGTGTTGAACAGAAC+TGG - chr1_2:69599021-69599040 None:intergenic 45.0%
CGAAAGCTATTACTCGAAGC+TGG + chr1_2:69599141-69599160 Msa0088510:CDS 45.0%
CAAAGTGAAGGACCATTCTG+AGG + chr1_2:69599212-69599231 Msa0088510:CDS 45.0%
CTTTCGAGAGTTCCTCAGAA+TGG - chr1_2:69599227-69599246 None:intergenic 45.0%
! CATTCTGAGGAACTCTCGAA+AGG + chr1_2:69599225-69599244 Msa0088510:CDS 45.0%
TGCAGCTCTTGTAGTTGTGA+TGG + chr1_2:69599251-69599270 Msa0088510:CDS 45.0%
TGTCAGCATTTGCATGGTCA+TGG + chr1_2:69599286-69599305 Msa0088510:CDS 45.0%
GTCAGCATTTGCATGGTCAT+GGG + chr1_2:69599287-69599306 Msa0088510:CDS 45.0%
TCAGCATTTGCATGGTCATG+GGG + chr1_2:69599288-69599307 Msa0088510:CDS 45.0%
CTTGGAATAAGCCAAGCAAG+TGG - chr1_2:69599315-69599334 None:intergenic 45.0%
CATTCTTTGTCTCAGGGACA+AGG - chr1_2:69599512-69599531 None:intergenic 45.0%
AAGAGATGACACAGAGAGTG+TGG + chr1_2:69599541-69599560 Msa0088510:CDS 45.0%
!!! TGTGGAAGCAGCATTGGTTT+TGG + chr1_2:69599559-69599578 Msa0088510:CDS 45.0%
!!! AGCAGCATTGGTTTTGGAAG+AGG + chr1_2:69599565-69599584 Msa0088510:CDS 45.0%
GACAAGATCATTTCTGCCAG+GGG - chr1_2:69599640-69599659 None:intergenic 45.0%
GAGACAAGATCATTTCTGCC+AGG - chr1_2:69599642-69599661 None:intergenic 45.0%
!! TTGTAAAAATAAATAAATAA+AGG + chr1_2:69596987-69597006 Msa0088510:intron 5.0%
CGGCAACGACAGAGAATTTG+AGG + chr1_2:69594824-69594843 Msa0088510:CDS 50.0%
TCATGCATAATGGCTGCCAC+CGG + chr1_2:69594873-69594892 Msa0088510:CDS 50.0%
ACCAAACATAAGACCTCCGG+TGG - chr1_2:69594892-69594911 None:intergenic 50.0%
AACGGTCTTGAGACAGACGA+CGG + chr1_2:69595245-69595264 Msa0088510:CDS 50.0%
AGACAGACGACGGAATCAGA+TGG + chr1_2:69595255-69595274 Msa0088510:CDS 50.0%
GACAGACGACGGAATCAGAT+GGG + chr1_2:69595256-69595275 Msa0088510:CDS 50.0%
AGGCTCACAATGTTGATCGC+TGG + chr1_2:69595399-69595418 Msa0088510:CDS 50.0%
! GCTGGCTTCTTCTTCATAGC+TGG + chr1_2:69595417-69595436 Msa0088510:CDS 50.0%
! CTCACCTTTTAGTGAACGCG+TGG + chr1_2:69596707-69596726 Msa0088510:intron 50.0%
! ACACTTGCTGGTGACCACTT+TGG + chr1_2:69597110-69597129 Msa0088510:intron 50.0%
! CACTTGCTGGTGACCACTTT+GGG + chr1_2:69597111-69597130 Msa0088510:intron 50.0%
!! CCCCTAAAATAAAGGTGCCC+TGG + chr1_2:69597981-69598000 Msa0088510:intron 50.0%
!!! GCCCAGGGCACCTTTATTTT+AGG - chr1_2:69597986-69598005 None:intergenic 50.0%
TTTCGTTGTTAGACCAGGGG+TGG - chr1_2:69598036-69598055 None:intergenic 50.0%
TCAAAGGTCATTGGGGTTGG+AGG + chr1_2:69598379-69598398 Msa0088510:CDS 50.0%
TTGGGGTTGGAGGATATCTC+TGG + chr1_2:69598389-69598408 Msa0088510:CDS 50.0%
TGGGGTTGGAGGATATCTCT+GGG + chr1_2:69598390-69598409 Msa0088510:CDS 50.0%
!! AGGATATCTCTGGGATTGGG+AGG + chr1_2:69598399-69598418 Msa0088510:CDS 50.0%
GAACGTGGTCACTTGGACAA+AGG + chr1_2:69598486-69598505 Msa0088510:CDS 50.0%
! GGCAAGTCGTGTTGCTAAAG+AGG + chr1_2:69598575-69598594 Msa0088510:CDS 50.0%
CACTAGAGACTCGTTCTGCA+GGG + chr1_2:69599346-69599365 Msa0088510:CDS 50.0%
GTGCAATGACAGCAGTGAAG+AGG - chr1_2:69599398-69599417 None:intergenic 50.0%
! AGAGAGTGTGGAAGCAGCAT+TGG + chr1_2:69599553-69599572 Msa0088510:CDS 50.0%
! GTACATGGTGGAAATTCCCC+TGG + chr1_2:69599621-69599640 Msa0088510:CDS 50.0%
! GCCACCGGAGGTCTTATGTT+TGG + chr1_2:69594888-69594907 Msa0088510:CDS 55.0%
GTCGTCTGTCTCAAGACCGT+TGG - chr1_2:69595246-69595265 None:intergenic 55.0%
GGTAGGGTCTTACTTGGCTG+TGG + chr1_2:69595486-69595505 Msa0088510:CDS 55.0%
GAGGTCGGTTATTGCGCTTG+AGG - chr1_2:69598623-69598642 None:intergenic 55.0%
CCTGCAGAACGAGTCTCTAG+TGG - chr1_2:69599348-69599367 None:intergenic 55.0%
CCACTAGAGACTCGTTCTGC+AGG + chr1_2:69599345-69599364 Msa0088510:CDS 55.0%
! ATGACGGGAGGAGGCTTCAG+CGG + chr1_2:69594801-69594820 Msa0088510:CDS 60.0%
TGCATAATGGCTGCCACCGG+AGG + chr1_2:69594876-69594895 Msa0088510:CDS 60.0%
GGTCATGGGGTCCACTTGCT+TGG + chr1_2:69599301-69599320 Msa0088510:CDS 60.0%
TAGACCAGGGGTGGCCCTGA+GGG - chr1_2:69598027-69598046 None:intergenic 65.0%
TTAGACCAGGGGTGGCCCTG+AGG - chr1_2:69598028-69598047 None:intergenic 65.0%
ACGGGAGGAGGCTTCAGCGG+CGG + chr1_2:69594804-69594823 Msa0088510:CDS 70.0%
CTGAGGGTGGACGGAAGGGG+CGG - chr1_2:69598011-69598030 None:intergenic 70.0%
GCCCCTTCCGTCCACCCTCA+GGG + chr1_2:69598010-69598029 Msa0088510:intron 70.0%
GCCCTGAGGGTGGACGGAAG+GGG - chr1_2:69598014-69598033 None:intergenic 70.0%
GGCCCTGAGGGTGGACGGAA+GGG - chr1_2:69598015-69598034 None:intergenic 70.0%
TGGCCCTGAGGGTGGACGGA+AGG - chr1_2:69598016-69598035 None:intergenic 70.0%
ACGGAAGGGGCGGCAGCCCA+GGG - chr1_2:69598001-69598020 None:intergenic 75.0%
CGCCCCTTCCGTCCACCCTC+AGG + chr1_2:69598009-69598028 Msa0088510:intron 75.0%
GGGGTGGCCCTGAGGGTGGA+CGG - chr1_2:69598020-69598039 None:intergenic 75.0%
TCCACCCTCAGGGCCACCCC+TGG + chr1_2:69598020-69598039 Msa0088510:intron 75.0%
ACCAGGGGTGGCCCTGAGGG+TGG - chr1_2:69598024-69598043 None:intergenic 75.0%
! GACGGAAGGGGCGGCAGCCC+AGG - chr1_2:69598002-69598021 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 69594801 69599671 69594801 ID=Msa0088510;Name=Msa0088510
chr1_2 mRNA 69594801 69599671 69594801 ID=Msa0088510-mRNA-1;Parent=Msa0088510;Name=Msa0088510-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|1|1|5|0|523
chr1_2 exon 69594801 69594930 69594801 ID=Msa0088510-mRNA-1:exon:23942;Parent=Msa0088510-mRNA-1
chr1_2 exon 69595202 69595527 69595202 ID=Msa0088510-mRNA-1:exon:23943;Parent=Msa0088510-mRNA-1
chr1_2 exon 69597450 69597574 69597450 ID=Msa0088510-mRNA-1:exon:23944;Parent=Msa0088510-mRNA-1
chr1_2 exon 69598377 69598668 69598377 ID=Msa0088510-mRNA-1:exon:23945;Parent=Msa0088510-mRNA-1
chr1_2 exon 69598973 69599671 69598973 ID=Msa0088510-mRNA-1:exon:23946;Parent=Msa0088510-mRNA-1
chr1_2 CDS 69594801 69594930 69594801 ID=Msa0088510-mRNA-1:cds;Parent=Msa0088510-mRNA-1
chr1_2 CDS 69595202 69595527 69595202 ID=Msa0088510-mRNA-1:cds;Parent=Msa0088510-mRNA-1
chr1_2 CDS 69597450 69597574 69597450 ID=Msa0088510-mRNA-1:cds;Parent=Msa0088510-mRNA-1
chr1_2 CDS 69598377 69598668 69598377 ID=Msa0088510-mRNA-1:cds;Parent=Msa0088510-mRNA-1
chr1_2 CDS 69598973 69599671 69598973 ID=Msa0088510-mRNA-1:cds;Parent=Msa0088510-mRNA-1
Gene Sequence

>Msa0088510

ATGACGGGAGGAGGCTTCAGCGGCGGCAACGACAGAGAATTTGAGGCAAAGATAACTCCTATCATTATCATTTCATGCATAATGGCTGCCACCGGAGGTCTTATGTTTGGTTATGATGTTGGAGTTTCAGGCGGTGTGGCATCGATGCCACCCTTCTTGAAGAAGTTCTTTCCAACGGTCTTGAGACAGACGACGGAATCAGATGGGTCAGAAAGCAACTACTGCAAATACGATAACCAAGGGTTGCAGCTATTCACTTCATCATTGTATTTGGCGGGTTTAACGGTAACCTTCTTCGCGTCTTATACAACTCGAGTACTAGGAAGAAGGCTCACAATGTTGATCGCTGGCTTCTTCTTCATAGCTGGAGTTACTCTTAATGCATCTGCTCAAAACCTTCTCATGCTCATCGTTGGTAGGGTCTTACTTGGCTGTGGAATTGGATTTGCAAACCAGGCCGTGCCAGTTTTCCTTTCAGAGATTGCACCTTCAAGAATACGTGGAGCATTGAATATTTTGTTTCAGCTTGATATCACTCTTGGCATTCTATTTGCTAACCTTGTCAACTATGCCACCAACAAAATCAAAGGTCATTGGGGTTGGAGGATATCTCTGGGATTGGGAGGTATCCCAGCATTACTCCTCACTTTAGGGGCTTACTTAGTAGTGGACACCCCAAATAGTCTCATTGAACGTGGTCACTTGGACAAAGGAAAAGCTGTTCTGAGAAAGATTCGTGGCACGGACAACATTGAACCTGAGTTCTTAGAGTTAGTAGAGGCAAGTCGTGTTGCTAAAGAGGTGAAACATCCGTTCAGAAATCTCCTCAAGCGCAATAACCGACCTCAACTTGTCATTTCCATTGCCCTAATGATATTTCAGCAATTCACTGGCATCAATGCCATAATGTTCTATGCTCCAGTTCTGTTCAACACATTGGGATTCAAGAATGATGCTGCACTTTACTCTGCTGTGATTACTGGTGCTATCAATGTCGTCTCAACGATAGTCTCAATATATTCGGTTGATAAACTGGGACGTCGAAAGCTATTACTCGAAGCTGGTGTTCAAATGTTCTTGTCACAAATGGTGATAGCAATTGTACTAGGAATCAAAGTGAAGGACCATTCTGAGGAACTCTCGAAAGGGTATGCAGCTCTTGTAGTTGTGATGGTGTGTATTTTTGTGTCAGCATTTGCATGGTCATGGGGTCCACTTGCTTGGCTTATTCCAAGTGAGATATTTCCACTAGAGACTCGTTCTGCAGGGCAAAGTGTAACAGTTTGTGTCAACTTCCTCTTCACTGCTGTCATTGCACAAGCTTTCCTTTCAATGCTTTGTTATTTCAAGTTTGGTATCTTCTTTTTCTTCTCTGGTTGGATCTTGTTCATGTCAACTTTTGTCTTTTTCCTTGTCCCTGAGACAAAGAATGTCCCTATTGAAGAGATGACACAGAGAGTGTGGAAGCAGCATTGGTTTTGGAAGAGGTTTGTTGAAAGTGATTATATTGAAGATGAGAAAGTACATGGTGGAAATTCCCCTGGCAGAAATGATCTTGTCTCTCAGTTGTAA
Protein sequence

>Msa0088510

MTGGGFSGGNDREFEAKITPIIIISCIMAATGGLMFGYDVGVSGGVASMPPFLKKFFPTVLRQTTESDGSESNYCKYDNQGLQLFTSSLYLAGLTVTFFASYTTRVLGRRLTMLIAGFFFIAGVTLNASAQNLLMLIVGRVLLGCGIGFANQAVPVFLSEIAPSRIRGALNILFQLDITLGILFANLVNYATNKIKGHWGWRISLGLGGIPALLLTLGAYLVVDTPNSLIERGHLDKGKAVLRKIRGTDNIEPEFLELVEASRVAKEVKHPFRNLLKRNNRPQLVISIALMIFQQFTGINAIMFYAPVLFNTLGFKNDAALYSAVITGAINVVSTIVSIYSVDKLGRRKLLLEAGVQMFLSQMVIAIVLGIKVKDHSEELSKGYAALVVVMVCIFVSAFAWSWGPLAWLIPSEIFPLETRSAGQSVTVCVNFLFTAVIAQAFLSMLCYFKFGIFFFFSGWILFMSTFVFFLVPETKNVPIEEMTQRVWKQHWFWKRFVESDYIEDEKVHGGNSPGRNDLVSQL*