AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1328430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1328430 MtrunA17_Chr8g0372491 96.562 320 11 0 2 321 1 320 0.0 642
Msa1328430 MtrunA17_Chr7g0272441 47.368 323 158 4 4 318 1 319 1.09e-108 319
Msa1328430 MtrunA17_Chr7g0272501 47.988 323 156 4 4 318 1 319 2.33e-108 318
Msa1328430 MtrunA17_Chr4g0067581 47.468 316 162 3 7 318 40 355 7.86e-108 318
Msa1328430 MtrunA17_Chr7g0272431 46.440 323 161 5 4 318 1 319 1.53e-107 316
Msa1328430 MtrunA17_Chr7g0272531 48.276 319 161 3 4 318 31 349 1.98e-107 317
Msa1328430 MtrunA17_Chr7g0272171 47.649 319 163 3 4 318 1 319 1.30e-106 313
Msa1328430 MtrunA17_Chr7g0272451 47.188 320 160 5 4 318 1 316 2.24e-106 313
Msa1328430 MtrunA17_Chr7g0272481 46.708 319 166 3 4 318 1 319 4.75e-106 312
Msa1328430 MtrunA17_Chr7g0269471 46.688 317 167 2 4 318 1 317 1.48e-105 311
Msa1328430 MtrunA17_Chr7g0272181 47.335 319 164 3 4 318 1 319 4.49e-105 310
Msa1328430 MtrunA17_Chr4g0000111 44.410 322 172 5 4 318 1 322 1.72e-95 285
Msa1328430 MtrunA17_Chr4g0047701 38.050 318 184 6 4 317 1 309 1.98e-73 229
Msa1328430 MtrunA17_Chr4g0047681 37.736 318 185 6 4 317 1 309 3.75e-71 223
Msa1328430 MtrunA17_Chr2g0324141 35.202 321 196 6 4 320 1 313 9.36e-67 212
Msa1328430 MtrunA17_Chr2g0324161 34.268 321 199 6 4 320 1 313 4.03e-65 207
Msa1328430 MtrunA17_Chr1g0192291 53.797 158 70 1 4 158 1 158 1.44e-59 188
Msa1328430 MtrunA17_Chr7g0272471 52.564 156 73 1 4 158 1 156 1.59e-59 188
Msa1328430 MtrunA17_Chr7g0272461 44.156 77 43 0 206 282 29 105 1.17e-20 86.7
Msa1328430 MtrunA17_Chr3g0086531 46.575 73 39 0 82 154 1 73 1.12e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1328430 AT3G51000.1 63.009 319 113 4 5 319 3 320 4.55e-152 429
Msa1328430 AT4G02340.1 47.812 320 158 5 4 318 1 316 4.76e-107 315
Msa1328430 AT3G05600.1 46.341 328 159 6 4 318 1 324 1.99e-100 299
Msa1328430 AT2G26740.1 47.664 321 159 5 7 318 1 321 3.92e-91 275
Msa1328430 AT4G15960.1 41.745 321 178 4 7 318 54 374 4.10e-88 269
Msa1328430 AT2G26750.1 46.372 317 162 5 7 315 1 317 2.16e-87 265
Msa1328430 AT4G15955.3 41.325 317 148 8 8 311 6 297 8.85e-81 248
Msa1328430 AT3G05600.2 46.559 247 117 5 4 239 1 243 4.08e-74 228
Msa1328430 AT4G15955.2 50.289 173 75 3 8 169 6 178 1.82e-56 181
Msa1328430 AT4G15955.1 50.303 165 71 3 8 161 6 170 2.51e-53 173

Find 88 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAGCATGATAACCATTT+TGG 0.142448 8_4:-46287375 None:intergenic
ATTGGTCTTCTTGATCATTT+TGG 0.150021 8_4:+46287481 Msa1328430:CDS
CGCCAAGAATACCATATTTC+TGG 0.182663 8_4:-46287331 None:intergenic
AGCTCATGTTTGCCAATTTC+AGG 0.222501 8_4:+46288609 Msa1328430:CDS
CATATTGTTGGTGACCTTAT+TGG 0.232766 8_4:+46287463 Msa1328430:CDS
ACGATACACAACAACTTATT+AGG 0.240318 8_4:+46287196 None:intergenic
CTCAACTACTTGGCCCAAAA+TGG 0.297865 8_4:+46287361 Msa1328430:CDS
TTCATGGTTTCCCAGAAATA+TGG 0.300646 8_4:+46287320 Msa1328430:CDS
CCTAATCTAGAGATAGTTTA+CGG 0.303872 8_4:-46289264 None:intergenic
AAGGGTAATCTACCTGAAAT+TGG 0.307281 8_4:-46288621 None:intergenic
TCCCAGAAATATGGTATTCT+TGG 0.309032 8_4:+46287329 Msa1328430:CDS
CCACTAGTTCTACTGCTTCA+TGG 0.344231 8_4:+46287304 Msa1328430:CDS
GATGGCACCTAAGTCTATTT+AGG 0.355832 8_4:+46288485 Msa1328430:CDS
CCGTAAACTATCTCTAGATT+AGG 0.356075 8_4:+46289264 Msa1328430:CDS
GTGTATGAATTGGGGTTGAT+AGG 0.358412 8_4:-46287433 None:intergenic
ACAAACCCCTTCACTCTATC+AGG 0.370013 8_4:-46288508 None:intergenic
TACACTCTTCAACATATTGT+TGG 0.372583 8_4:+46287451 Msa1328430:CDS
CGTAAACTATCTCTAGATTA+GGG 0.379541 8_4:+46289265 Msa1328430:CDS
TCTCCGGCAATAAACTTAGT+TGG 0.388206 8_4:-46289082 None:intergenic
TGATTTCTTGCCAACTCCTT+CGG 0.394280 8_4:+46288834 Msa1328430:CDS
GTTCCAACTAAGTTTATTGC+CGG 0.395155 8_4:+46289079 Msa1328430:CDS
GCAGACAAATTCCAAGAGTC+TGG 0.396715 8_4:+46288898 Msa1328430:CDS
TGTTGAAGAGTGTATGAATT+GGG 0.407460 8_4:-46287442 None:intergenic
AGAGAAAGCTCAACAAGTTT+CGG 0.408255 8_4:+46289222 Msa1328430:CDS
GCACCTGATCTAAGAGGATA+TGG 0.428528 8_4:+46287397 Msa1328430:CDS
TACATGTATATTTATTCCGT+TGG 0.437349 8_4:-46287263 None:intergenic
AAAACCAACATCTTTGTCTC+CGG 0.451884 8_4:-46289098 None:intergenic
GAAACTATAAGAAAAGTATA+CGG 0.452414 8_4:+46288580 Msa1328430:CDS
GTTGGAGATCTTGGAAAGTA+AGG 0.455828 8_4:-46288544 None:intergenic
TAGAGATAGTTTACGGATGA+AGG 0.460572 8_4:-46289257 None:intergenic
CTTGAAGTGGTTATACTAGA+TGG 0.462250 8_4:+46289181 Msa1328430:CDS
CACCGGTGAAACCAGACTCT+TGG 0.472500 8_4:-46288909 None:intergenic
AGTATAACCACTTCAAGGTT+AGG 0.474123 8_4:-46289175 None:intergenic
TTCCAAGAGTCTGGTTTCAC+CGG 0.475025 8_4:+46288907 Msa1328430:CDS
AATGATCAAGAAGACCAATA+AGG 0.475165 8_4:-46287477 None:intergenic
GCCAAGAATACCATATTTCT+GGG 0.482112 8_4:-46287330 None:intergenic
GGGCCAAGTAGTTGAGTTGG+TGG 0.492922 8_4:-46287354 None:intergenic
TCACCATATCCTCTTAGATC+AGG 0.494603 8_4:-46287400 None:intergenic
CTTTCTCTTGATGTATATAG+TGG 0.499966 8_4:-46289207 None:intergenic
CATCTAGTATAACCACTTCA+AGG 0.501344 8_4:-46289180 None:intergenic
TGCGCCACAAGCTAGACAAA+GGG 0.501762 8_4:-46289327 None:intergenic
TTTGGGCCAAGTAGTTGAGT+TGG 0.505675 8_4:-46287357 None:intergenic
CATGTAGCAGAACAAGGAAC+AGG 0.506519 8_4:+46287280 Msa1328430:CDS
ATTGGGGTTGATAGGAGAAT+CGG 0.507484 8_4:-46287425 None:intergenic
TGAATGAAGGCATATGTAGT+AGG 0.512881 8_4:+46288439 Msa1328430:intron
TATCAGGCCTAAATAGACTT+AGG 0.515370 8_4:-46288492 None:intergenic
CCACCCCTTTGTCTAGCTTG+TGG 0.515398 8_4:+46289323 Msa1328430:three_prime_UTR
ATAGTTTACGGATGAAGGAA+AGG 0.519190 8_4:-46289252 None:intergenic
ATGTTGAAGAGTGTATGAAT+TGG 0.524008 8_4:-46287443 None:intergenic
CATATGTAGTAGGATCTGAC+TGG 0.526683 8_4:+46288449 Msa1328430:CDS
GTTATCTTTGATCCTTGCCA+TGG 0.532855 8_4:-46289055 None:intergenic
CAAGGTTAGGAACAAGACTC+TGG 0.533494 8_4:-46289162 None:intergenic
GCGCCACCAACTCAACTACT+TGG 0.535864 8_4:+46287351 Msa1328430:CDS
TATAACAGCTCCTCCTGGCA+TGG 0.539454 8_4:+46288804 Msa1328430:CDS
TCTTGTTCCTAACCTTGAAG+TGG 0.541399 8_4:+46289168 Msa1328430:CDS
TTGCGTGGTTGGCAGGAACC+AGG 0.547693 8_4:+46288703 Msa1328430:intron
AAATCAACAATCTCCATGCC+AGG 0.548033 8_4:-46288817 None:intergenic
TCTGACTGGGGAGCAAACAT+TGG 0.557088 8_4:+46288463 Msa1328430:CDS
TTTAGGCCTGATAGAGTGAA+GGG 0.566974 8_4:+46288502 Msa1328430:CDS
ATAAGAAAAGTATACGGAGA+TGG 0.570679 8_4:+46288586 Msa1328430:CDS
ATTGCCGGAGACAAAGATGT+TGG 0.571908 8_4:+46289094 Msa1328430:CDS
ACTGGGGAGCAAACATTGGA+TGG 0.572887 8_4:+46288467 Msa1328430:CDS
GCTGTTGCACCTGATCTAAG+AGG 0.588705 8_4:+46287391 Msa1328430:CDS
ATATGTAGTAGGATCTGACT+GGG 0.595018 8_4:+46288450 Msa1328430:CDS
AAAGCTCTCTCTGCACGACC+TGG 0.595328 8_4:-46288721 None:intergenic
ATCCACGACGGCAAAACCGA+AGG 0.595962 8_4:-46288850 None:intergenic
GACGGCAAAACCGAAGGAGT+TGG 0.599928 8_4:-46288844 None:intergenic
ACTCAATGGTTACAGAAGCT+GGG 0.603841 8_4:+46289021 Msa1328430:intron
CACCAAAGAATCAAAACCAA+CGG 0.604850 8_4:+46287247 Msa1328430:CDS
ATTTAGGCCTGATAGAGTGA+AGG 0.608580 8_4:+46288501 Msa1328430:CDS
GTGCGCCACAAGCTAGACAA+AGG 0.608866 8_4:-46289328 None:intergenic
GATAACCGAGGAAGAACTCA+TGG 0.608940 8_4:+46288870 Msa1328430:CDS
CCATGAAGCAGTAGAACTAG+TGG 0.617178 8_4:-46287304 None:intergenic
CACTTCAGTCATGAAGAACA+TGG 0.621193 8_4:-46287221 None:intergenic
GTTGAAGAGTGTATGAATTG+GGG 0.627329 8_4:-46287441 None:intergenic
AATATACATGTAGCAGAACA+AGG 0.633512 8_4:+46287274 Msa1328430:CDS
GAAAGCTCAACAAGTTTCGG+AGG 0.645089 8_4:+46289225 Msa1328430:CDS
TTAGGCCTGATAGAGTGAAG+GGG 0.646633 8_4:+46288503 Msa1328430:CDS
GAACTTCTAGCACCATGGCA+AGG 0.648382 8_4:+46289043 Msa1328430:CDS
GCGATAGTAATTGAATGCAC+CGG 0.666695 8_4:-46288926 None:intergenic
CCACAAGCTAGACAAAGGGG+TGG 0.688618 8_4:-46289323 None:intergenic
TTTGCCGTCGTGGATAACCG+AGG 0.689324 8_4:+46288858 Msa1328430:CDS
GCTGGGAACTTCTAGCACCA+TGG 0.691193 8_4:+46289038 Msa1328430:CDS
TCTTCCTCGGTTATCCACGA+CGG 0.703931 8_4:-46288862 None:intergenic
ATTCAATTACTATCGCGCAA+TGG 0.705978 8_4:+46288933 Msa1328430:CDS
TCAACAATCTCCATGCCAGG+AGG 0.721559 8_4:-46288814 None:intergenic
GCGCCACAAGCTAGACAAAG+GGG 0.722760 8_4:-46289326 None:intergenic
TATGTAGTAGGATCTGACTG+GGG 0.804727 8_4:+46288451 Msa1328430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAACTAAAAAAACG+TGG - chr8_4:46287549-46287568 None:intergenic 15.0%
!! TATTTCAATAAATATCTACA+CGG - chr8_4:46288350-46288369 None:intergenic 15.0%
!! AAAACTAAACAAAAAAACAT+AGG - chr8_4:46288978-46288997 None:intergenic 15.0%
!! ATTATTAAACTAAAAAAACG+TGG - chr8_4:46287549-46287568 None:intergenic 15.0%
!! TATTTCAATAAATATCTACA+CGG - chr8_4:46288350-46288369 None:intergenic 15.0%
!! AAAACTAAACAAAAAAACAT+AGG - chr8_4:46288978-46288997 None:intergenic 15.0%
!!! TTATATCAAGTTGAATATTG+TGG - chr8_4:46287730-46287749 None:intergenic 20.0%
!!! TACTTATCTATTTTCTTTAG+AGG - chr8_4:46287928-46287947 None:intergenic 20.0%
!! TACAATGGTAAATTGTAATT+TGG - chr8_4:46288044-46288063 None:intergenic 20.0%
!!! AACTTTAGGTTTTTACAAAT+GGG + chr8_4:46288152-46288171 Msa1328430:intron 20.0%
!!! AAGTTTACATATATCGTTTT+AGG + chr8_4:46288291-46288310 Msa1328430:intron 20.0%
!! AAATTAGGAAATTAGGAAAA+AGG - chr8_4:46288402-46288421 None:intergenic 20.0%
!! AGAGAATAAATTAGGAAATT+AGG - chr8_4:46288409-46288428 None:intergenic 20.0%
!!! GAAACTATAAGAAAAGTATA+CGG + chr8_4:46288580-46288599 Msa1328430:CDS 20.0%
!! ACAAAAAAACATAGGAAAAA+TGG - chr8_4:46288970-46288989 None:intergenic 20.0%
!!! TTATATCAAGTTGAATATTG+TGG - chr8_4:46287730-46287749 None:intergenic 20.0%
!!! TACTTATCTATTTTCTTTAG+AGG - chr8_4:46287928-46287947 None:intergenic 20.0%
!! TACAATGGTAAATTGTAATT+TGG - chr8_4:46288044-46288063 None:intergenic 20.0%
!!! AACTTTAGGTTTTTACAAAT+GGG + chr8_4:46288152-46288171 Msa1328430:intron 20.0%
!!! AAGTTTACATATATCGTTTT+AGG + chr8_4:46288291-46288310 Msa1328430:intron 20.0%
!! AAATTAGGAAATTAGGAAAA+AGG - chr8_4:46288402-46288421 None:intergenic 20.0%
!! AGAGAATAAATTAGGAAATT+AGG - chr8_4:46288409-46288428 None:intergenic 20.0%
!!! GAAACTATAAGAAAAGTATA+CGG + chr8_4:46288580-46288599 Msa1328430:CDS 20.0%
!! ACAAAAAAACATAGGAAAAA+TGG - chr8_4:46288970-46288989 None:intergenic 20.0%
! TACATGTATATTTATTCCGT+TGG - chr8_4:46287266-46287285 None:intergenic 25.0%
! ATTAAACTAAAAAAACGTGG+AGG - chr8_4:46287546-46287565 None:intergenic 25.0%
! ATCTTTGAACGTGATTAATT+AGG - chr8_4:46287633-46287652 None:intergenic 25.0%
!!! TTATCTATTTTCTTTAGAGG+TGG - chr8_4:46287925-46287944 None:intergenic 25.0%
! ATTACAATTTACCATTGTAC+CGG + chr8_4:46288045-46288064 Msa1328430:intron 25.0%
!!! CAACTTTAGGTTTTTACAAA+TGG + chr8_4:46288151-46288170 Msa1328430:intron 25.0%
!!! ACTTTAGGTTTTTACAAATG+GGG + chr8_4:46288153-46288172 Msa1328430:intron 25.0%
! AAACGATATATGTAAACTTG+AGG - chr8_4:46288290-46288309 None:intergenic 25.0%
!!! ATCGTTTTAGGTCTTAATTT+AGG + chr8_4:46288303-46288322 Msa1328430:intron 25.0%
! GAAATATAATTGTACGCAAT+TGG + chr8_4:46288364-46288383 Msa1328430:intron 25.0%
! AACTTTATCAAGCCATAAAA+GGG - chr8_4:46288642-46288661 None:intergenic 25.0%
! TAACTTTATCAAGCCATAAA+AGG - chr8_4:46288643-46288662 None:intergenic 25.0%
!! TAATTTTCATTGAAATTGCG+TGG + chr8_4:46288688-46288707 Msa1328430:intron 25.0%
!!! AAAGATGTTGGTTTTCAAAA+TGG + chr8_4:46289106-46289125 Msa1328430:CDS 25.0%
!!! AAGATGTTGGTTTTCAAAAT+GGG + chr8_4:46289107-46289126 Msa1328430:CDS 25.0%
! TACATGTATATTTATTCCGT+TGG - chr8_4:46287266-46287285 None:intergenic 25.0%
! ATTAAACTAAAAAAACGTGG+AGG - chr8_4:46287546-46287565 None:intergenic 25.0%
! ATCTTTGAACGTGATTAATT+AGG - chr8_4:46287633-46287652 None:intergenic 25.0%
!!! TTATCTATTTTCTTTAGAGG+TGG - chr8_4:46287925-46287944 None:intergenic 25.0%
! ATTACAATTTACCATTGTAC+CGG + chr8_4:46288045-46288064 Msa1328430:intron 25.0%
!!! CAACTTTAGGTTTTTACAAA+TGG + chr8_4:46288151-46288170 Msa1328430:intron 25.0%
!!! ACTTTAGGTTTTTACAAATG+GGG + chr8_4:46288153-46288172 Msa1328430:intron 25.0%
! AAACGATATATGTAAACTTG+AGG - chr8_4:46288290-46288309 None:intergenic 25.0%
!!! ATCGTTTTAGGTCTTAATTT+AGG + chr8_4:46288303-46288322 Msa1328430:intron 25.0%
! GAAATATAATTGTACGCAAT+TGG + chr8_4:46288364-46288383 Msa1328430:intron 25.0%
! AACTTTATCAAGCCATAAAA+GGG - chr8_4:46288642-46288661 None:intergenic 25.0%
! TAACTTTATCAAGCCATAAA+AGG - chr8_4:46288643-46288662 None:intergenic 25.0%
!! TAATTTTCATTGAAATTGCG+TGG + chr8_4:46288688-46288707 Msa1328430:intron 25.0%
!!! AAAGATGTTGGTTTTCAAAA+TGG + chr8_4:46289106-46289125 Msa1328430:CDS 25.0%
!!! AAGATGTTGGTTTTCAAAAT+GGG + chr8_4:46289107-46289126 Msa1328430:CDS 25.0%
AATATACATGTAGCAGAACA+AGG + chr8_4:46287274-46287293 Msa1328430:CDS 30.0%
! AACAGCATGATAACCATTTT+GGG - chr8_4:46287377-46287396 None:intergenic 30.0%
! TGTTGAAGAGTGTATGAATT+GGG - chr8_4:46287445-46287464 None:intergenic 30.0%
! ATGTTGAAGAGTGTATGAAT+TGG - chr8_4:46287446-46287465 None:intergenic 30.0%
TACACTCTTCAACATATTGT+TGG + chr8_4:46287451-46287470 Msa1328430:CDS 30.0%
AATGATCAAGAAGACCAATA+AGG - chr8_4:46287480-46287499 None:intergenic 30.0%
!!! ATTGGTCTTCTTGATCATTT+TGG + chr8_4:46287481-46287500 Msa1328430:CDS 30.0%
!! TGATCATTTTGGTGAACAAA+AGG + chr8_4:46287492-46287511 Msa1328430:CDS 30.0%
! GTTTAATTTAGCTGAGTAGA+TGG + chr8_4:46287655-46287674 Msa1328430:intron 30.0%
TTGTGGTCAATTCAACTATA+AGG + chr8_4:46287700-46287719 Msa1328430:intron 30.0%
! GGTAAATCGTTTGTGTTTTT+GGG - chr8_4:46287957-46287976 None:intergenic 30.0%
! TGGTAAATCGTTTGTGTTTT+TGG - chr8_4:46287958-46287977 None:intergenic 30.0%
AAACGATTTACCATAGAGTT+CGG + chr8_4:46287965-46287984 Msa1328430:intron 30.0%
GAGTCATATTCAACAACTTT+AGG + chr8_4:46288138-46288157 Msa1328430:intron 30.0%
! ATTTTGCCTACAACATGAAA+AGG - chr8_4:46288181-46288200 None:intergenic 30.0%
!! GTGTTATTGACTCAAACATA+TGG - chr8_4:46288262-46288281 None:intergenic 30.0%
TATATGTAAACTTGAGGTCT+TGG - chr8_4:46288284-46288303 None:intergenic 30.0%
TTAGGAAAAAGGATAGTTTG+AGG - chr8_4:46288391-46288410 None:intergenic 30.0%
TGGGATAGAGAGAATAAATT+AGG - chr8_4:46288417-46288436 None:intergenic 30.0%
ACATATGCCTTCATTCAAAT+GGG - chr8_4:46288436-46288455 None:intergenic 30.0%
TACATATGCCTTCATTCAAA+TGG - chr8_4:46288437-46288456 None:intergenic 30.0%
!! GTTTCAACAGTTTTATCTGT+TGG - chr8_4:46288565-46288584 None:intergenic 30.0%
! ATAAGAAAAGTATACGGAGA+TGG + chr8_4:46288586-46288605 Msa1328430:CDS 30.0%
!! AGAAGTTTTTGCTGATTACA+TGG + chr8_4:46288773-46288792 Msa1328430:CDS 30.0%
ATAGGAAAAATGGTACTTAC+AGG - chr8_4:46288960-46288979 None:intergenic 30.0%
ATCCATTTATTCACACTCAA+TGG + chr8_4:46289007-46289026 Msa1328430:intron 30.0%
AACCATTGAGTGTGAATAAA+TGG - chr8_4:46289012-46289031 None:intergenic 30.0%
!!! AGATGTTGGTTTTCAAAATG+GGG + chr8_4:46289108-46289127 Msa1328430:CDS 30.0%
CTTTCTCTTGATGTATATAG+TGG - chr8_4:46289210-46289229 None:intergenic 30.0%
CCTAATCTAGAGATAGTTTA+CGG - chr8_4:46289267-46289286 None:intergenic 30.0%
CGTAAACTATCTCTAGATTA+GGG + chr8_4:46289265-46289284 Msa1328430:CDS 30.0%
AATATACATGTAGCAGAACA+AGG + chr8_4:46287274-46287293 Msa1328430:CDS 30.0%
! AACAGCATGATAACCATTTT+GGG - chr8_4:46287377-46287396 None:intergenic 30.0%
! TGTTGAAGAGTGTATGAATT+GGG - chr8_4:46287445-46287464 None:intergenic 30.0%
! ATGTTGAAGAGTGTATGAAT+TGG - chr8_4:46287446-46287465 None:intergenic 30.0%
TACACTCTTCAACATATTGT+TGG + chr8_4:46287451-46287470 Msa1328430:CDS 30.0%
AATGATCAAGAAGACCAATA+AGG - chr8_4:46287480-46287499 None:intergenic 30.0%
!!! ATTGGTCTTCTTGATCATTT+TGG + chr8_4:46287481-46287500 Msa1328430:CDS 30.0%
!! TGATCATTTTGGTGAACAAA+AGG + chr8_4:46287492-46287511 Msa1328430:CDS 30.0%
! GTTTAATTTAGCTGAGTAGA+TGG + chr8_4:46287655-46287674 Msa1328430:intron 30.0%
TTGTGGTCAATTCAACTATA+AGG + chr8_4:46287700-46287719 Msa1328430:intron 30.0%
! GGTAAATCGTTTGTGTTTTT+GGG - chr8_4:46287957-46287976 None:intergenic 30.0%
! TGGTAAATCGTTTGTGTTTT+TGG - chr8_4:46287958-46287977 None:intergenic 30.0%
AAACGATTTACCATAGAGTT+CGG + chr8_4:46287965-46287984 Msa1328430:intron 30.0%
GAGTCATATTCAACAACTTT+AGG + chr8_4:46288138-46288157 Msa1328430:intron 30.0%
! ATTTTGCCTACAACATGAAA+AGG - chr8_4:46288181-46288200 None:intergenic 30.0%
!! GTGTTATTGACTCAAACATA+TGG - chr8_4:46288262-46288281 None:intergenic 30.0%
TATATGTAAACTTGAGGTCT+TGG - chr8_4:46288284-46288303 None:intergenic 30.0%
TTAGGAAAAAGGATAGTTTG+AGG - chr8_4:46288391-46288410 None:intergenic 30.0%
TGGGATAGAGAGAATAAATT+AGG - chr8_4:46288417-46288436 None:intergenic 30.0%
ACATATGCCTTCATTCAAAT+GGG - chr8_4:46288436-46288455 None:intergenic 30.0%
TACATATGCCTTCATTCAAA+TGG - chr8_4:46288437-46288456 None:intergenic 30.0%
!! GTTTCAACAGTTTTATCTGT+TGG - chr8_4:46288565-46288584 None:intergenic 30.0%
! ATAAGAAAAGTATACGGAGA+TGG + chr8_4:46288586-46288605 Msa1328430:CDS 30.0%
!! AGAAGTTTTTGCTGATTACA+TGG + chr8_4:46288773-46288792 Msa1328430:CDS 30.0%
ATAGGAAAAATGGTACTTAC+AGG - chr8_4:46288960-46288979 None:intergenic 30.0%
ATCCATTTATTCACACTCAA+TGG + chr8_4:46289007-46289026 Msa1328430:intron 30.0%
AACCATTGAGTGTGAATAAA+TGG - chr8_4:46289012-46289031 None:intergenic 30.0%
!!! AGATGTTGGTTTTCAAAATG+GGG + chr8_4:46289108-46289127 Msa1328430:CDS 30.0%
CTTTCTCTTGATGTATATAG+TGG - chr8_4:46289210-46289229 None:intergenic 30.0%
CCTAATCTAGAGATAGTTTA+CGG - chr8_4:46289267-46289286 None:intergenic 30.0%
CGTAAACTATCTCTAGATTA+GGG + chr8_4:46289265-46289284 Msa1328430:CDS 30.0%
CACCAAAGAATCAAAACCAA+CGG + chr8_4:46287247-46287266 Msa1328430:CDS 35.0%
!!! TTCCGTTGGTTTTGATTCTT+TGG - chr8_4:46287252-46287271 None:intergenic 35.0%
TTCATGGTTTCCCAGAAATA+TGG + chr8_4:46287320-46287339 Msa1328430:CDS 35.0%
TCCCAGAAATATGGTATTCT+TGG + chr8_4:46287329-46287348 Msa1328430:CDS 35.0%
GCCAAGAATACCATATTTCT+GGG - chr8_4:46287333-46287352 None:intergenic 35.0%
! CAACAGCATGATAACCATTT+TGG - chr8_4:46287378-46287397 None:intergenic 35.0%
! GTTGAAGAGTGTATGAATTG+GGG - chr8_4:46287444-46287463 None:intergenic 35.0%
!! CATATTGTTGGTGACCTTAT+TGG + chr8_4:46287463-46287482 Msa1328430:CDS 35.0%
TCAAGTCACAGTCAAAATTG+TGG + chr8_4:46287683-46287702 Msa1328430:intron 35.0%
CCTTAATCTCATGCAAATTG+TGG - chr8_4:46287779-46287798 None:intergenic 35.0%
CCACAATTTGCATGAGATTA+AGG + chr8_4:46287776-46287795 Msa1328430:intron 35.0%
!!! AATCGTTTGTGTTTTTGGGA+TGG - chr8_4:46287953-46287972 None:intergenic 35.0%
TTCACTCATAACTCACAAGT+GGG - chr8_4:46288117-46288136 None:intergenic 35.0%
ATTCACTCATAACTCACAAG+TGG - chr8_4:46288118-46288137 None:intergenic 35.0%
GCATCATGAAAATGTCATGT+TGG - chr8_4:46288210-46288229 None:intergenic 35.0%
TCTCTATCCCATTTGAATGA+AGG + chr8_4:46288426-46288445 Msa1328430:intron 35.0%
! TGAATGAAGGCATATGTAGT+AGG + chr8_4:46288439-46288458 Msa1328430:intron 35.0%
ATATGTAGTAGGATCTGACT+GGG + chr8_4:46288450-46288469 Msa1328430:CDS 35.0%
TATCAGGCCTAAATAGACTT+AGG - chr8_4:46288495-46288514 None:intergenic 35.0%
! GTTTTATCTGTTGGAGATCT+TGG - chr8_4:46288556-46288575 None:intergenic 35.0%
AAGGGTAATCTACCTGAAAT+TGG - chr8_4:46288624-46288643 None:intergenic 35.0%
! TCAGGTAGATTACCCTTTTA+TGG + chr8_4:46288627-46288646 Msa1328430:intron 35.0%
TTTCATTGAAATTGCGTGGT+TGG + chr8_4:46288692-46288711 Msa1328430:intron 35.0%
AAAAACCATGAGTTCTTCCT+CGG - chr8_4:46288878-46288897 None:intergenic 35.0%
ATTCAATTACTATCGCGCAA+TGG + chr8_4:46288933-46288952 Msa1328430:CDS 35.0%
GTTCCAACTAAGTTTATTGC+CGG + chr8_4:46289079-46289098 Msa1328430:CDS 35.0%
AAAACCAACATCTTTGTCTC+CGG - chr8_4:46289101-46289120 None:intergenic 35.0%
!!! GATGTTGGTTTTCAAAATGG+GGG + chr8_4:46289109-46289128 Msa1328430:CDS 35.0%
! GGTACAAAAGATTTTGTGGA+AGG + chr8_4:46289130-46289149 Msa1328430:CDS 35.0%
AGTATAACCACTTCAAGGTT+AGG - chr8_4:46289178-46289197 None:intergenic 35.0%
CATCTAGTATAACCACTTCA+AGG - chr8_4:46289183-46289202 None:intergenic 35.0%
CTTGAAGTGGTTATACTAGA+TGG + chr8_4:46289181-46289200 Msa1328430:CDS 35.0%
AGAGAAAGCTCAACAAGTTT+CGG + chr8_4:46289222-46289241 Msa1328430:CDS 35.0%
ATAGTTTACGGATGAAGGAA+AGG - chr8_4:46289255-46289274 None:intergenic 35.0%
TAGAGATAGTTTACGGATGA+AGG - chr8_4:46289260-46289279 None:intergenic 35.0%
CCGTAAACTATCTCTAGATT+AGG + chr8_4:46289264-46289283 Msa1328430:CDS 35.0%
CACCAAAGAATCAAAACCAA+CGG + chr8_4:46287247-46287266 Msa1328430:CDS 35.0%
!!! TTCCGTTGGTTTTGATTCTT+TGG - chr8_4:46287252-46287271 None:intergenic 35.0%
TTCATGGTTTCCCAGAAATA+TGG + chr8_4:46287320-46287339 Msa1328430:CDS 35.0%
TCCCAGAAATATGGTATTCT+TGG + chr8_4:46287329-46287348 Msa1328430:CDS 35.0%
GCCAAGAATACCATATTTCT+GGG - chr8_4:46287333-46287352 None:intergenic 35.0%
! CAACAGCATGATAACCATTT+TGG - chr8_4:46287378-46287397 None:intergenic 35.0%
! GTTGAAGAGTGTATGAATTG+GGG - chr8_4:46287444-46287463 None:intergenic 35.0%
!! CATATTGTTGGTGACCTTAT+TGG + chr8_4:46287463-46287482 Msa1328430:CDS 35.0%
TCAAGTCACAGTCAAAATTG+TGG + chr8_4:46287683-46287702 Msa1328430:intron 35.0%
CCTTAATCTCATGCAAATTG+TGG - chr8_4:46287779-46287798 None:intergenic 35.0%
CCACAATTTGCATGAGATTA+AGG + chr8_4:46287776-46287795 Msa1328430:intron 35.0%
!!! AATCGTTTGTGTTTTTGGGA+TGG - chr8_4:46287953-46287972 None:intergenic 35.0%
TTCACTCATAACTCACAAGT+GGG - chr8_4:46288117-46288136 None:intergenic 35.0%
ATTCACTCATAACTCACAAG+TGG - chr8_4:46288118-46288137 None:intergenic 35.0%
GCATCATGAAAATGTCATGT+TGG - chr8_4:46288210-46288229 None:intergenic 35.0%
TCTCTATCCCATTTGAATGA+AGG + chr8_4:46288426-46288445 Msa1328430:intron 35.0%
! TGAATGAAGGCATATGTAGT+AGG + chr8_4:46288439-46288458 Msa1328430:intron 35.0%
ATATGTAGTAGGATCTGACT+GGG + chr8_4:46288450-46288469 Msa1328430:CDS 35.0%
TATCAGGCCTAAATAGACTT+AGG - chr8_4:46288495-46288514 None:intergenic 35.0%
! GTTTTATCTGTTGGAGATCT+TGG - chr8_4:46288556-46288575 None:intergenic 35.0%
AAGGGTAATCTACCTGAAAT+TGG - chr8_4:46288624-46288643 None:intergenic 35.0%
! TCAGGTAGATTACCCTTTTA+TGG + chr8_4:46288627-46288646 Msa1328430:intron 35.0%
TTTCATTGAAATTGCGTGGT+TGG + chr8_4:46288692-46288711 Msa1328430:intron 35.0%
AAAAACCATGAGTTCTTCCT+CGG - chr8_4:46288878-46288897 None:intergenic 35.0%
ATTCAATTACTATCGCGCAA+TGG + chr8_4:46288933-46288952 Msa1328430:CDS 35.0%
GTTCCAACTAAGTTTATTGC+CGG + chr8_4:46289079-46289098 Msa1328430:CDS 35.0%
AAAACCAACATCTTTGTCTC+CGG - chr8_4:46289101-46289120 None:intergenic 35.0%
!!! GATGTTGGTTTTCAAAATGG+GGG + chr8_4:46289109-46289128 Msa1328430:CDS 35.0%
! GGTACAAAAGATTTTGTGGA+AGG + chr8_4:46289130-46289149 Msa1328430:CDS 35.0%
AGTATAACCACTTCAAGGTT+AGG - chr8_4:46289178-46289197 None:intergenic 35.0%
CATCTAGTATAACCACTTCA+AGG - chr8_4:46289183-46289202 None:intergenic 35.0%
CTTGAAGTGGTTATACTAGA+TGG + chr8_4:46289181-46289200 Msa1328430:CDS 35.0%
AGAGAAAGCTCAACAAGTTT+CGG + chr8_4:46289222-46289241 Msa1328430:CDS 35.0%
ATAGTTTACGGATGAAGGAA+AGG - chr8_4:46289255-46289274 None:intergenic 35.0%
TAGAGATAGTTTACGGATGA+AGG - chr8_4:46289260-46289279 None:intergenic 35.0%
CCGTAAACTATCTCTAGATT+AGG + chr8_4:46289264-46289283 Msa1328430:CDS 35.0%
CACTTCAGTCATGAAGAACA+TGG - chr8_4:46287224-46287243 None:intergenic 40.0%
CGCCAAGAATACCATATTTC+TGG - chr8_4:46287334-46287353 None:intergenic 40.0%
TCACCATATCCTCTTAGATC+AGG - chr8_4:46287403-46287422 None:intergenic 40.0%
!! ATTGGGGTTGATAGGAGAAT+CGG - chr8_4:46287428-46287447 None:intergenic 40.0%
! GTGTATGAATTGGGGTTGAT+AGG - chr8_4:46287436-46287455 None:intergenic 40.0%
TTAAGGATATGCCGTAGATG+TGG + chr8_4:46287793-46287812 Msa1328430:intron 40.0%
CCGAATTTACTCCACATCTA+CGG - chr8_4:46287807-46287826 None:intergenic 40.0%
CCGTAGATGTGGAGTAAATT+CGG + chr8_4:46287804-46287823 Msa1328430:intron 40.0%
TTATATCTGAGCGAGTCTCA+AGG + chr8_4:46287871-46287890 Msa1328430:intron 40.0%
TATATCTGAGCGAGTCTCAA+GGG + chr8_4:46287872-46287891 Msa1328430:intron 40.0%
CAACAAACTTACCGGTACAA+TGG - chr8_4:46288059-46288078 None:intergenic 40.0%
! TGAAAGCGCAACAAACTTAC+CGG - chr8_4:46288067-46288086 None:intergenic 40.0%
CATATGTAGTAGGATCTGAC+TGG + chr8_4:46288449-46288468 Msa1328430:CDS 40.0%
TATGTAGTAGGATCTGACTG+GGG + chr8_4:46288451-46288470 Msa1328430:CDS 40.0%
GATGGCACCTAAGTCTATTT+AGG + chr8_4:46288485-46288504 Msa1328430:CDS 40.0%
ATTTAGGCCTGATAGAGTGA+AGG + chr8_4:46288501-46288520 Msa1328430:CDS 40.0%
TTTAGGCCTGATAGAGTGAA+GGG + chr8_4:46288502-46288521 Msa1328430:CDS 40.0%
GTTGGAGATCTTGGAAAGTA+AGG - chr8_4:46288547-46288566 None:intergenic 40.0%
AGCTCATGTTTGCCAATTTC+AGG + chr8_4:46288609-46288628 Msa1328430:CDS 40.0%
! CATTTTATAACAGCTCCTCC+TGG + chr8_4:46288799-46288818 Msa1328430:CDS 40.0%
AAATCAACAATCTCCATGCC+AGG - chr8_4:46288820-46288839 None:intergenic 40.0%
TGATTTCTTGCCAACTCCTT+CGG + chr8_4:46288834-46288853 Msa1328430:CDS 40.0%
GCGATAGTAATTGAATGCAC+CGG - chr8_4:46288929-46288948 None:intergenic 40.0%
ACTCAATGGTTACAGAAGCT+GGG + chr8_4:46289021-46289040 Msa1328430:intron 40.0%
GTTATCTTTGATCCTTGCCA+TGG - chr8_4:46289058-46289077 None:intergenic 40.0%
TCTCCGGCAATAAACTTAGT+TGG - chr8_4:46289085-46289104 None:intergenic 40.0%
!! TGGGGGTACAAAAGATTTTG+TGG + chr8_4:46289126-46289145 Msa1328430:CDS 40.0%
TCTTGTTCCTAACCTTGAAG+TGG + chr8_4:46289168-46289187 Msa1328430:CDS 40.0%
CACTTCAGTCATGAAGAACA+TGG - chr8_4:46287224-46287243 None:intergenic 40.0%
CGCCAAGAATACCATATTTC+TGG - chr8_4:46287334-46287353 None:intergenic 40.0%
TCACCATATCCTCTTAGATC+AGG - chr8_4:46287403-46287422 None:intergenic 40.0%
!! ATTGGGGTTGATAGGAGAAT+CGG - chr8_4:46287428-46287447 None:intergenic 40.0%
! GTGTATGAATTGGGGTTGAT+AGG - chr8_4:46287436-46287455 None:intergenic 40.0%
TTAAGGATATGCCGTAGATG+TGG + chr8_4:46287793-46287812 Msa1328430:intron 40.0%
CCGAATTTACTCCACATCTA+CGG - chr8_4:46287807-46287826 None:intergenic 40.0%
CCGTAGATGTGGAGTAAATT+CGG + chr8_4:46287804-46287823 Msa1328430:intron 40.0%
TTATATCTGAGCGAGTCTCA+AGG + chr8_4:46287871-46287890 Msa1328430:intron 40.0%
TATATCTGAGCGAGTCTCAA+GGG + chr8_4:46287872-46287891 Msa1328430:intron 40.0%
CAACAAACTTACCGGTACAA+TGG - chr8_4:46288059-46288078 None:intergenic 40.0%
! TGAAAGCGCAACAAACTTAC+CGG - chr8_4:46288067-46288086 None:intergenic 40.0%
CATATGTAGTAGGATCTGAC+TGG + chr8_4:46288449-46288468 Msa1328430:CDS 40.0%
TATGTAGTAGGATCTGACTG+GGG + chr8_4:46288451-46288470 Msa1328430:CDS 40.0%
GATGGCACCTAAGTCTATTT+AGG + chr8_4:46288485-46288504 Msa1328430:CDS 40.0%
ATTTAGGCCTGATAGAGTGA+AGG + chr8_4:46288501-46288520 Msa1328430:CDS 40.0%
TTTAGGCCTGATAGAGTGAA+GGG + chr8_4:46288502-46288521 Msa1328430:CDS 40.0%
GTTGGAGATCTTGGAAAGTA+AGG - chr8_4:46288547-46288566 None:intergenic 40.0%
AGCTCATGTTTGCCAATTTC+AGG + chr8_4:46288609-46288628 Msa1328430:CDS 40.0%
! CATTTTATAACAGCTCCTCC+TGG + chr8_4:46288799-46288818 Msa1328430:CDS 40.0%
AAATCAACAATCTCCATGCC+AGG - chr8_4:46288820-46288839 None:intergenic 40.0%
TGATTTCTTGCCAACTCCTT+CGG + chr8_4:46288834-46288853 Msa1328430:CDS 40.0%
GCGATAGTAATTGAATGCAC+CGG - chr8_4:46288929-46288948 None:intergenic 40.0%
ACTCAATGGTTACAGAAGCT+GGG + chr8_4:46289021-46289040 Msa1328430:intron 40.0%
GTTATCTTTGATCCTTGCCA+TGG - chr8_4:46289058-46289077 None:intergenic 40.0%
TCTCCGGCAATAAACTTAGT+TGG - chr8_4:46289085-46289104 None:intergenic 40.0%
!! TGGGGGTACAAAAGATTTTG+TGG + chr8_4:46289126-46289145 Msa1328430:CDS 40.0%
TCTTGTTCCTAACCTTGAAG+TGG + chr8_4:46289168-46289187 Msa1328430:CDS 40.0%
CATGTAGCAGAACAAGGAAC+AGG + chr8_4:46287280-46287299 Msa1328430:CDS 45.0%
CCATGAAGCAGTAGAACTAG+TGG - chr8_4:46287307-46287326 None:intergenic 45.0%
!! CCACTAGTTCTACTGCTTCA+TGG + chr8_4:46287304-46287323 Msa1328430:CDS 45.0%
TTTGGGCCAAGTAGTTGAGT+TGG - chr8_4:46287360-46287379 None:intergenic 45.0%
CTCAACTACTTGGCCCAAAA+TGG + chr8_4:46287361-46287380 Msa1328430:CDS 45.0%
GCACCTGATCTAAGAGGATA+TGG + chr8_4:46287397-46287416 Msa1328430:CDS 45.0%
CCATGATTGACCGAACTCTA+TGG - chr8_4:46287978-46287997 None:intergenic 45.0%
CCATAGAGTTCGGTCAATCA+TGG + chr8_4:46287975-46287994 Msa1328430:intron 45.0%
CTCATAACTCACAAGTGGGT+AGG - chr8_4:46288113-46288132 None:intergenic 45.0%
! GGGGAACCTTTTCATGTTGT+AGG + chr8_4:46288172-46288191 Msa1328430:intron 45.0%
TTAGGCCTGATAGAGTGAAG+GGG + chr8_4:46288503-46288522 Msa1328430:CDS 45.0%
ACAAACCCCTTCACTCTATC+AGG - chr8_4:46288511-46288530 None:intergenic 45.0%
ATTGAAATTGCGTGGTTGGC+AGG + chr8_4:46288696-46288715 Msa1328430:intron 45.0%
GATAACCGAGGAAGAACTCA+TGG + chr8_4:46288870-46288889 Msa1328430:CDS 45.0%
GCAGACAAATTCCAAGAGTC+TGG + chr8_4:46288898-46288917 Msa1328430:CDS 45.0%
! TTCCAAGAGTCTGGTTTCAC+CGG + chr8_4:46288907-46288926 Msa1328430:CDS 45.0%
CACTCAATGGTTACAGAAGC+TGG + chr8_4:46289020-46289039 Msa1328430:intron 45.0%
ATTGCCGGAGACAAAGATGT+TGG + chr8_4:46289094-46289113 Msa1328430:CDS 45.0%
CAAGGTTAGGAACAAGACTC+TGG - chr8_4:46289165-46289184 None:intergenic 45.0%
GAAAGCTCAACAAGTTTCGG+AGG + chr8_4:46289225-46289244 Msa1328430:CDS 45.0%
CATGTAGCAGAACAAGGAAC+AGG + chr8_4:46287280-46287299 Msa1328430:CDS 45.0%
CCATGAAGCAGTAGAACTAG+TGG - chr8_4:46287307-46287326 None:intergenic 45.0%
!! CCACTAGTTCTACTGCTTCA+TGG + chr8_4:46287304-46287323 Msa1328430:CDS 45.0%
TTTGGGCCAAGTAGTTGAGT+TGG - chr8_4:46287360-46287379 None:intergenic 45.0%
CTCAACTACTTGGCCCAAAA+TGG + chr8_4:46287361-46287380 Msa1328430:CDS 45.0%
GCACCTGATCTAAGAGGATA+TGG + chr8_4:46287397-46287416 Msa1328430:CDS 45.0%
CCATGATTGACCGAACTCTA+TGG - chr8_4:46287978-46287997 None:intergenic 45.0%
CCATAGAGTTCGGTCAATCA+TGG + chr8_4:46287975-46287994 Msa1328430:intron 45.0%
CTCATAACTCACAAGTGGGT+AGG - chr8_4:46288113-46288132 None:intergenic 45.0%
! GGGGAACCTTTTCATGTTGT+AGG + chr8_4:46288172-46288191 Msa1328430:intron 45.0%
TTAGGCCTGATAGAGTGAAG+GGG + chr8_4:46288503-46288522 Msa1328430:CDS 45.0%
ACAAACCCCTTCACTCTATC+AGG - chr8_4:46288511-46288530 None:intergenic 45.0%
ATTGAAATTGCGTGGTTGGC+AGG + chr8_4:46288696-46288715 Msa1328430:intron 45.0%
GATAACCGAGGAAGAACTCA+TGG + chr8_4:46288870-46288889 Msa1328430:CDS 45.0%
GCAGACAAATTCCAAGAGTC+TGG + chr8_4:46288898-46288917 Msa1328430:CDS 45.0%
! TTCCAAGAGTCTGGTTTCAC+CGG + chr8_4:46288907-46288926 Msa1328430:CDS 45.0%
CACTCAATGGTTACAGAAGC+TGG + chr8_4:46289020-46289039 Msa1328430:intron 45.0%
ATTGCCGGAGACAAAGATGT+TGG + chr8_4:46289094-46289113 Msa1328430:CDS 45.0%
CAAGGTTAGGAACAAGACTC+TGG - chr8_4:46289165-46289184 None:intergenic 45.0%
GAAAGCTCAACAAGTTTCGG+AGG + chr8_4:46289225-46289244 Msa1328430:CDS 45.0%
GCTGTTGCACCTGATCTAAG+AGG + chr8_4:46287391-46287410 Msa1328430:CDS 50.0%
ACGTGGAGGCTCAAGAGAAT+TGG - chr8_4:46287532-46287551 None:intergenic 50.0%
TCTGACTGGGGAGCAAACAT+TGG + chr8_4:46288463-46288482 Msa1328430:CDS 50.0%
ACTGGGGAGCAAACATTGGA+TGG + chr8_4:46288467-46288486 Msa1328430:CDS 50.0%
TATAACAGCTCCTCCTGGCA+TGG + chr8_4:46288804-46288823 Msa1328430:CDS 50.0%
TCAACAATCTCCATGCCAGG+AGG - chr8_4:46288817-46288836 None:intergenic 50.0%
TCTTCCTCGGTTATCCACGA+CGG - chr8_4:46288865-46288884 None:intergenic 50.0%
GAACTTCTAGCACCATGGCA+AGG + chr8_4:46289043-46289062 Msa1328430:CDS 50.0%
TGCGCCACAAGCTAGACAAA+GGG - chr8_4:46289330-46289349 None:intergenic 50.0%
GCTGTTGCACCTGATCTAAG+AGG + chr8_4:46287391-46287410 Msa1328430:CDS 50.0%
ACGTGGAGGCTCAAGAGAAT+TGG - chr8_4:46287532-46287551 None:intergenic 50.0%
TCTGACTGGGGAGCAAACAT+TGG + chr8_4:46288463-46288482 Msa1328430:CDS 50.0%
ACTGGGGAGCAAACATTGGA+TGG + chr8_4:46288467-46288486 Msa1328430:CDS 50.0%
TATAACAGCTCCTCCTGGCA+TGG + chr8_4:46288804-46288823 Msa1328430:CDS 50.0%
TCAACAATCTCCATGCCAGG+AGG - chr8_4:46288817-46288836 None:intergenic 50.0%
TCTTCCTCGGTTATCCACGA+CGG - chr8_4:46288865-46288884 None:intergenic 50.0%
GAACTTCTAGCACCATGGCA+AGG + chr8_4:46289043-46289062 Msa1328430:CDS 50.0%
TGCGCCACAAGCTAGACAAA+GGG - chr8_4:46289330-46289349 None:intergenic 50.0%
GCGCCACCAACTCAACTACT+TGG + chr8_4:46287351-46287370 Msa1328430:CDS 55.0%
!! GGGCCAAGTAGTTGAGTTGG+TGG - chr8_4:46287357-46287376 None:intergenic 55.0%
AAAGCTCTCTCTGCACGACC+TGG - chr8_4:46288724-46288743 None:intergenic 55.0%
GACGGCAAAACCGAAGGAGT+TGG - chr8_4:46288847-46288866 None:intergenic 55.0%
ATCCACGACGGCAAAACCGA+AGG - chr8_4:46288853-46288872 None:intergenic 55.0%
TTTGCCGTCGTGGATAACCG+AGG + chr8_4:46288858-46288877 Msa1328430:CDS 55.0%
CACCGGTGAAACCAGACTCT+TGG - chr8_4:46288912-46288931 None:intergenic 55.0%
GCTGGGAACTTCTAGCACCA+TGG + chr8_4:46289038-46289057 Msa1328430:CDS 55.0%
CCACAAGCTAGACAAAGGGG+TGG - chr8_4:46289326-46289345 None:intergenic 55.0%
! CCACCCCTTTGTCTAGCTTG+TGG + chr8_4:46289323-46289342 Msa1328430:three_prime_UTR 55.0%
GCGCCACAAGCTAGACAAAG+GGG - chr8_4:46289329-46289348 None:intergenic 55.0%
GTGCGCCACAAGCTAGACAA+AGG - chr8_4:46289331-46289350 None:intergenic 55.0%
GCGCCACCAACTCAACTACT+TGG + chr8_4:46287351-46287370 Msa1328430:CDS 55.0%
!! GGGCCAAGTAGTTGAGTTGG+TGG - chr8_4:46287357-46287376 None:intergenic 55.0%
AAAGCTCTCTCTGCACGACC+TGG - chr8_4:46288724-46288743 None:intergenic 55.0%
GACGGCAAAACCGAAGGAGT+TGG - chr8_4:46288847-46288866 None:intergenic 55.0%
ATCCACGACGGCAAAACCGA+AGG - chr8_4:46288853-46288872 None:intergenic 55.0%
TTTGCCGTCGTGGATAACCG+AGG + chr8_4:46288858-46288877 Msa1328430:CDS 55.0%
CACCGGTGAAACCAGACTCT+TGG - chr8_4:46288912-46288931 None:intergenic 55.0%
GCTGGGAACTTCTAGCACCA+TGG + chr8_4:46289038-46289057 Msa1328430:CDS 55.0%
CCACAAGCTAGACAAAGGGG+TGG - chr8_4:46289326-46289345 None:intergenic 55.0%
! CCACCCCTTTGTCTAGCTTG+TGG + chr8_4:46289323-46289342 Msa1328430:three_prime_UTR 55.0%
GCGCCACAAGCTAGACAAAG+GGG - chr8_4:46289329-46289348 None:intergenic 55.0%
GTGCGCCACAAGCTAGACAA+AGG - chr8_4:46289331-46289350 None:intergenic 55.0%
AGGCGCTCGAGCATATCGAG+TGG - chr8_4:46288093-46288112 None:intergenic 60.0%
TTGCGTGGTTGGCAGGAACC+AGG + chr8_4:46288703-46288722 Msa1328430:intron 60.0%
! CTCCTTCGGTTTTGCCGTCG+TGG + chr8_4:46288848-46288867 Msa1328430:CDS 60.0%
AGGCGCTCGAGCATATCGAG+TGG - chr8_4:46288093-46288112 None:intergenic 60.0%
TTGCGTGGTTGGCAGGAACC+AGG + chr8_4:46288703-46288722 Msa1328430:intron 60.0%
! CTCCTTCGGTTTTGCCGTCG+TGG + chr8_4:46288848-46288867 Msa1328430:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 46287207 46289444 46287207 ID=Msa1328430;Name=Msa1328430
chr8_4 mRNA 46287207 46289444 46287207 ID=Msa1328430-mRNA-1;Parent=Msa1328430;Name=Msa1328430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=16|1|1|1|1|1|4|159|321
chr8_4 exon 46287207 46287513 46287207 ID=Msa1328430-mRNA-1:exon:13112;Parent=Msa1328430-mRNA-1
chr8_4 exon 46288448 46288630 46288448 ID=Msa1328430-mRNA-1:exon:13113;Parent=Msa1328430-mRNA-1
chr8_4 exon 46288718 46288959 46288718 ID=Msa1328430-mRNA-1:exon:13114;Parent=Msa1328430-mRNA-1
chr8_4 exon 46289036 46289444 46289036 ID=Msa1328430-mRNA-1:exon:13115;Parent=Msa1328430-mRNA-1
chr8_4 five_prime_UTR 46287207 46287222 46287207 ID=Msa1328430-mRNA-1:five_prime_utr;Parent=Msa1328430-mRNA-1
chr8_4 CDS 46287223 46287513 46287223 ID=Msa1328430-mRNA-1:cds;Parent=Msa1328430-mRNA-1
chr8_4 CDS 46288448 46288630 46288448 ID=Msa1328430-mRNA-1:cds;Parent=Msa1328430-mRNA-1
chr8_4 CDS 46288718 46288959 46288718 ID=Msa1328430-mRNA-1:cds;Parent=Msa1328430-mRNA-1
chr8_4 CDS 46289036 46289285 46289036 ID=Msa1328430-mRNA-1:cds;Parent=Msa1328430-mRNA-1
chr8_4 three_prime_UTR 46289286 46289444 46289286 ID=Msa1328430-mRNA-1:three_prime_utr;Parent=Msa1328430-mRNA-1
Gene Sequence

>Msa1328430

ATGTTCTTCATGACTGAAGTGAATCACCAAAGAATCAAAACCAACGGAATAAATATACATGTAGCAGAACAAGGAACAGGACCACTAGTTCTACTGCTTCATGGTTTCCCAGAAATATGGTATTCTTGGCGCCACCAACTCAACTACTTGGCCCAAAATGGTTATCATGCTGTTGCACCTGATCTAAGAGGATATGGTGACTCCGATTCTCCTATCAACCCCAATTCATACACTCTTCAACATATTGTTGGTGACCTTATTGGTCTTCTTGATCATTTTGGTGAACAAAAGGCATATGTAGTAGGATCTGACTGGGGAGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCTGATAGAGTGAAGGGGTTTGTTGCTCTATGTGTTCCTTACTTTCCAAGATCTCCAACAGATAAAACTGTTGAAACTATAAGAAAAGTATACGGAGATGGAGCTCATGTTTGCCAATTTCAGGAACCAGGTCGTGCAGAGAGAGCTTTTGCTAGATATGATTGTTTGACAGTGATGAAGAAGTTTTTGCTGATTACATGGACACATTTTATAACAGCTCCTCCTGGCATGGAGATTGTTGATTTCTTGCCAACTCCTTCGGTTTTGCCGTCGTGGATAACCGAGGAAGAACTCATGGTTTTTGCAGACAAATTCCAAGAGTCTGGTTTCACCGGTGCATTCAATTACTATCGCGCAATGGACCTAAGCTGGGAACTTCTAGCACCATGGCAAGGATCAAAGATAACAGTTCCAACTAAGTTTATTGCCGGAGACAAAGATGTTGGTTTTCAAAATGGGGGTACAAAAGATTTTGTGGAAGGTGATATTTTCCAGAGTCTTGTTCCTAACCTTGAAGTGGTTATACTAGATGGTCACCACTATATACATCAAGAGAAAGCTCAACAAGTTTCGGAGGAAATCCTTTCCTTCATCCGTAAACTATCTCTAGATTAG

Protein sequence

>Msa1328430

MFFMTEVNHQRIKTNGINIHVAEQGTGPLVLLLHGFPEIWYSWRHQLNYLAQNGYHAVAPDLRGYGDSDSPINPNSYTLQHIVGDLIGLLDHFGEQKAYVVGSDWGANIGWHLSLFRPDRVKGFVALCVPYFPRSPTDKTVETIRKVYGDGAHVCQFQEPGRAERAFARYDCLTVMKKFLLITWTHFITAPPGMEIVDFLPTPSVLPSWITEEELMVFADKFQESGFTGAFNYYRAMDLSWELLAPWQGSKITVPTKFIAGDKDVGFQNGGTKDFVEGDIFQSLVPNLEVVILDGHHYIHQEKAQQVSEEILSFIRKLSLD*