Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0135240 | sp|Q94AZ2|STP13_ARATH | 76.503 | 366 | 85 | 1 | 40 | 405 | 154 | 518 | 0.0 | 593 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0135240 | G7ID81 | 98.652 | 371 | 5 | 0 | 40 | 410 | 153 | 523 | 0.0 | 747 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0044450 | Msa0135240 | 0.967331 | 3.942995e-127 | -8.615850e-47 |
Msa0088510 | Msa0135240 | 0.945876 | 1.341467e-104 | -8.615850e-47 |
Msa0135240 | Msa0179770 | 0.855163 | 7.583713e-62 | -8.615850e-47 |
Msa0135240 | Msa0242720 | 0.829973 | 3.814069e-55 | -8.615850e-47 |
Msa0135240 | Msa0294200 | 0.803802 | 2.929278e-49 | -8.615850e-47 |
Msa0135240 | Msa0303900 | 0.803869 | 2.837685e-49 | -8.615850e-47 |
Msa0135240 | Msa0320170 | 0.808467 | 3.053072e-50 | -8.615850e-47 |
Msa0135240 | Msa0490100 | 0.812085 | 5.061472e-51 | -8.615850e-47 |
Msa0135240 | Msa0491960 | 0.802880 | 4.547572e-49 | -8.615850e-47 |
Msa0135240 | Msa0548420 | 0.802083 | 6.638505e-49 | -8.615850e-47 |
Msa0135240 | Msa0603310 | 0.806105 | 9.667184e-50 | -8.615850e-47 |
Msa0135240 | Msa0686830 | 0.802355 | 5.836411e-49 | -8.615850e-47 |
Msa0135240 | Msa0744710 | 0.804632 | 1.968286e-49 | -8.615850e-47 |
Msa0135240 | Msa0826240 | 0.810147 | 1.332072e-50 | -8.615850e-47 |
Msa0135240 | Msa0921860 | 0.810740 | 9.919229e-51 | -8.615850e-47 |
Msa0135240 | Msa1026970 | 0.801756 | 7.750315e-49 | -8.615850e-47 |
Msa0135240 | Msa1094810 | 0.804859 | 1.764145e-49 | -8.615850e-47 |
Msa0135240 | Msa1107220 | 0.811721 | 6.076092e-51 | -8.615850e-47 |
Msa0135240 | Msa1150760 | 0.814889 | 1.224166e-51 | -8.615850e-47 |
Msa0135240 | Msa1154310 | 0.803429 | 3.500567e-49 | -8.615850e-47 |
Msa0135240 | Msa1202110 | 0.805474 | 1.311840e-49 | -8.615850e-47 |
Msa0135240 | Msa1223710 | 0.812195 | 4.791084e-51 | -8.615850e-47 |
Msa0135240 | Msa1254870 | 0.802680 | 5.002291e-49 | -8.615850e-47 |
Msa0135240 | Msa1328430 | 0.801372 | 9.290495e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0135240 | MtrunA17_Chr1g0205691 | 98.652 | 371 | 5 | 0 | 40 | 410 | 153 | 523 | 0.0 | 747 |
Msa0135240 | MtrunA17_Chr5g0394341 | 82.796 | 372 | 60 | 2 | 40 | 410 | 153 | 521 | 0.0 | 633 |
Msa0135240 | MtrunA17_Chr1g0205671 | 70.605 | 347 | 102 | 0 | 40 | 386 | 153 | 499 | 0.0 | 521 |
Msa0135240 | MtrunA17_Chr1g0205681 | 70.605 | 347 | 102 | 0 | 40 | 386 | 154 | 500 | 0.0 | 520 |
Msa0135240 | MtrunA17_Chr4g0065311 | 58.430 | 344 | 140 | 3 | 40 | 383 | 150 | 490 | 8.14e-152 | 439 |
Msa0135240 | MtrunA17_Chr3g0078971 | 56.303 | 357 | 150 | 5 | 40 | 394 | 153 | 505 | 8.14e-148 | 429 |
Msa0135240 | MtrunA17_Chr5g0445601 | 58.892 | 343 | 138 | 3 | 40 | 382 | 156 | 495 | 2.47e-144 | 420 |
Msa0135240 | MtrunA17_Chr7g0257631 | 58.017 | 343 | 141 | 3 | 40 | 382 | 190 | 529 | 2.23e-142 | 416 |
Msa0135240 | MtrunA17_Chr4g0065324 | 52.991 | 351 | 162 | 3 | 40 | 390 | 158 | 505 | 2.29e-140 | 410 |
Msa0135240 | MtrunA17_Chr4g0048411 | 59.312 | 349 | 139 | 2 | 40 | 386 | 153 | 500 | 4.86e-140 | 409 |
Msa0135240 | MtrunA17_Chr5g0437021 | 56.180 | 356 | 152 | 3 | 40 | 394 | 154 | 506 | 1.50e-137 | 403 |
Msa0135240 | MtrunA17_Chr4g0065351 | 53.666 | 341 | 155 | 3 | 48 | 388 | 1 | 338 | 9.14e-137 | 395 |
Msa0135240 | MtrunA17_Chr3g0078991 | 53.740 | 361 | 159 | 6 | 40 | 397 | 153 | 508 | 1.03e-136 | 400 |
Msa0135240 | MtrunA17_Chr1g0164871 | 55.249 | 362 | 153 | 4 | 40 | 400 | 154 | 507 | 2.70e-135 | 397 |
Msa0135240 | MtrunA17_Chr8g0390261 | 55.331 | 347 | 151 | 4 | 40 | 385 | 156 | 499 | 1.12e-134 | 395 |
Msa0135240 | MtrunA17_Chr1g0164851 | 56.484 | 347 | 147 | 3 | 40 | 385 | 154 | 497 | 4.11e-133 | 392 |
Msa0135240 | MtrunA17_Chr6g0486681 | 54.286 | 350 | 156 | 4 | 40 | 388 | 156 | 502 | 2.03e-132 | 390 |
Msa0135240 | MtrunA17_Chr6g0486671 | 54.286 | 350 | 156 | 4 | 40 | 388 | 156 | 502 | 2.03e-132 | 390 |
Msa0135240 | MtrunA17_Chr8g0390141 | 52.909 | 361 | 166 | 4 | 40 | 399 | 156 | 513 | 2.40e-132 | 390 |
Msa0135240 | MtrunA17_Chr5g0420841 | 50.696 | 359 | 171 | 3 | 40 | 396 | 152 | 506 | 5.17e-128 | 379 |
Msa0135240 | MtrunA17_Chr3g0128081 | 52.066 | 363 | 169 | 3 | 40 | 400 | 153 | 512 | 1.07e-127 | 378 |
Msa0135240 | MtrunA17_Chr4g0048051 | 54.085 | 355 | 160 | 2 | 40 | 392 | 153 | 506 | 3.75e-127 | 376 |
Msa0135240 | MtrunA17_Chr5g0417611 | 51.389 | 360 | 172 | 2 | 40 | 397 | 154 | 512 | 1.25e-124 | 370 |
Msa0135240 | MtrunA17_Chr3g0128171 | 53.602 | 347 | 158 | 2 | 40 | 384 | 106 | 451 | 1.61e-124 | 368 |
Msa0135240 | MtrunA17_Chr3g0115741 | 46.307 | 352 | 183 | 5 | 40 | 388 | 155 | 503 | 1.36e-120 | 360 |
Msa0135240 | MtrunA17_Chr3g0115751 | 46.023 | 352 | 184 | 5 | 40 | 388 | 157 | 505 | 8.60e-119 | 355 |
Msa0135240 | MtrunA17_Chr3g0085971 | 50.142 | 351 | 172 | 2 | 40 | 388 | 152 | 501 | 8.62e-119 | 355 |
Msa0135240 | MtrunA17_Chr3g0115781 | 46.027 | 365 | 185 | 7 | 40 | 401 | 154 | 509 | 1.68e-117 | 352 |
Msa0135240 | MtrunA17_Chr3g0078791 | 48.619 | 362 | 158 | 4 | 40 | 399 | 98 | 433 | 2.60e-117 | 348 |
Msa0135240 | MtrunA17_Chr3g0115721 | 45.658 | 357 | 188 | 5 | 40 | 393 | 152 | 505 | 4.19e-117 | 350 |
Msa0135240 | MtrunA17_Chr3g0115711 | 46.176 | 353 | 185 | 4 | 40 | 390 | 152 | 501 | 4.03e-116 | 348 |
Msa0135240 | MtrunA17_Chr3g0115731 | 44.969 | 318 | 169 | 5 | 75 | 389 | 166 | 480 | 3.80e-103 | 314 |
Msa0135240 | MtrunA17_Chr3g0115771 | 35.256 | 312 | 154 | 7 | 42 | 350 | 9 | 275 | 4.07e-56 | 186 |
Msa0135240 | MtrunA17_Chr6g0485661 | 32.537 | 335 | 210 | 6 | 42 | 364 | 170 | 500 | 4.56e-45 | 163 |
Msa0135240 | MtrunA17_Chr4g0034681 | 29.504 | 383 | 241 | 8 | 42 | 400 | 142 | 519 | 6.04e-44 | 160 |
Msa0135240 | MtrunA17_Chr4g0036021 | 29.508 | 366 | 231 | 7 | 38 | 383 | 135 | 493 | 8.54e-44 | 159 |
Msa0135240 | MtrunA17_Chr3g0144361 | 30.312 | 353 | 217 | 6 | 42 | 370 | 140 | 487 | 2.14e-43 | 158 |
Msa0135240 | MtrunA17_Chr2g0282031 | 29.107 | 347 | 230 | 7 | 33 | 370 | 157 | 496 | 1.33e-42 | 156 |
Msa0135240 | MtrunA17_Chr4g0021771 | 27.348 | 362 | 244 | 7 | 42 | 392 | 167 | 520 | 2.61e-42 | 155 |
Msa0135240 | MtrunA17_Chr1g0213611 | 29.235 | 366 | 245 | 7 | 33 | 386 | 181 | 544 | 3.85e-41 | 153 |
Msa0135240 | MtrunA17_Chr7g0214451 | 30.601 | 366 | 225 | 11 | 33 | 383 | 136 | 487 | 2.21e-40 | 150 |
Msa0135240 | MtrunA17_Chr1g0213631 | 29.775 | 356 | 232 | 10 | 33 | 378 | 88 | 435 | 1.06e-39 | 147 |
Msa0135240 | MtrunA17_Chr8g0390521 | 30.612 | 343 | 219 | 7 | 42 | 370 | 130 | 467 | 2.33e-39 | 147 |
Msa0135240 | MtrunA17_Chr8g0373181 | 30.725 | 345 | 224 | 7 | 31 | 370 | 147 | 481 | 2.62e-38 | 144 |
Msa0135240 | MtrunA17_Chr5g0432581 | 28.457 | 376 | 240 | 7 | 38 | 389 | 127 | 497 | 4.60e-38 | 143 |
Msa0135240 | MtrunA17_Chr8g0373531 | 28.800 | 375 | 238 | 7 | 42 | 392 | 131 | 500 | 3.22e-37 | 141 |
Msa0135240 | MtrunA17_Chr7g0273281 | 29.518 | 332 | 219 | 5 | 41 | 370 | 173 | 491 | 3.54e-37 | 141 |
Msa0135240 | MtrunA17_Chr8g0373191 | 30.435 | 345 | 225 | 6 | 31 | 370 | 119 | 453 | 6.52e-37 | 139 |
Msa0135240 | MtrunA17_Chr4g0032021 | 31.300 | 377 | 226 | 10 | 21 | 376 | 192 | 556 | 6.88e-37 | 141 |
Msa0135240 | MtrunA17_Chr1g0155221 | 30.857 | 350 | 222 | 8 | 31 | 372 | 149 | 486 | 5.71e-36 | 137 |
Msa0135240 | MtrunA17_Chr5g0446681 | 49.315 | 146 | 68 | 2 | 254 | 399 | 149 | 288 | 4.59e-35 | 131 |
Msa0135240 | MtrunA17_Chr4g0066581 | 30.448 | 335 | 213 | 7 | 41 | 370 | 163 | 482 | 2.44e-34 | 133 |
Msa0135240 | MtrunA17_Chr6g0457781 | 28.955 | 335 | 219 | 7 | 41 | 370 | 218 | 538 | 1.79e-33 | 131 |
Msa0135240 | MtrunA17_Chr7g0250881 | 28.947 | 342 | 227 | 7 | 33 | 370 | 169 | 498 | 1.82e-33 | 130 |
Msa0135240 | MtrunA17_Chr4g0039651 | 28.857 | 350 | 221 | 8 | 40 | 373 | 162 | 499 | 2.37e-33 | 130 |
Msa0135240 | MtrunA17_Chr7g0259221 | 26.586 | 331 | 228 | 5 | 46 | 374 | 158 | 475 | 5.96e-33 | 129 |
Msa0135240 | MtrunA17_Chr3g0121674 | 27.213 | 305 | 213 | 6 | 92 | 391 | 2 | 302 | 4.30e-32 | 123 |
Msa0135240 | MtrunA17_Chr2g0286721 | 29.129 | 333 | 220 | 7 | 41 | 370 | 160 | 479 | 5.60e-32 | 126 |
Msa0135240 | MtrunA17_Chr7g0259471 | 26.163 | 344 | 238 | 6 | 34 | 374 | 143 | 473 | 7.81e-32 | 125 |
Msa0135240 | MtrunA17_Chr8g0376611 | 36.190 | 210 | 121 | 5 | 39 | 239 | 71 | 276 | 7.82e-32 | 126 |
Msa0135240 | MtrunA17_Chr8g0376631 | 36.190 | 210 | 121 | 4 | 39 | 239 | 138 | 343 | 2.53e-31 | 125 |
Msa0135240 | MtrunA17_Chr2g0303731 | 33.613 | 238 | 148 | 5 | 39 | 269 | 138 | 372 | 3.46e-31 | 125 |
Msa0135240 | MtrunA17_Chr3g0119401 | 25.664 | 339 | 235 | 9 | 41 | 374 | 206 | 532 | 8.56e-30 | 120 |
Msa0135240 | MtrunA17_Chr2g0303701 | 33.484 | 221 | 141 | 5 | 39 | 255 | 138 | 356 | 2.12e-27 | 114 |
Msa0135240 | MtrunA17_Chr8g0376601 | 32.381 | 210 | 129 | 5 | 39 | 239 | 138 | 343 | 3.10e-27 | 113 |
Msa0135240 | MtrunA17_Chr5g0403831 | 26.781 | 351 | 235 | 6 | 41 | 370 | 142 | 491 | 4.01e-27 | 113 |
Msa0135240 | MtrunA17_Chr4g0004821 | 26.989 | 352 | 232 | 9 | 36 | 378 | 141 | 476 | 4.26e-27 | 112 |
Msa0135240 | MtrunA17_Chr6g0486021 | 27.336 | 289 | 194 | 6 | 36 | 320 | 155 | 431 | 1.25e-24 | 105 |
Msa0135240 | MtrunA17_Chr2g0290181 | 29.876 | 241 | 156 | 6 | 39 | 269 | 139 | 376 | 1.41e-24 | 105 |
Msa0135240 | MtrunA17_Chr7g0273261 | 29.956 | 227 | 149 | 4 | 144 | 370 | 17 | 233 | 1.15e-21 | 93.6 |
Msa0135240 | MtrunA17_Chr2g0290161 | 26.250 | 240 | 138 | 8 | 39 | 268 | 72 | 282 | 2.68e-17 | 83.6 |
Msa0135240 | MtrunA17_Chr8g0370151 | 27.953 | 254 | 154 | 6 | 128 | 368 | 105 | 342 | 2.16e-15 | 77.0 |
Msa0135240 | MtrunA17_Chr6g0450271 | 37.398 | 123 | 66 | 4 | 126 | 239 | 32 | 152 | 4.48e-15 | 74.7 |
Msa0135240 | MtrunA17_Chr3g0144261 | 27.888 | 251 | 151 | 10 | 144 | 372 | 473 | 715 | 5.20e-15 | 77.0 |
Msa0135240 | MtrunA17_Chr3g0144261 | 35.294 | 119 | 72 | 3 | 34 | 148 | 105 | 222 | 1.33e-11 | 66.6 |
Msa0135240 | MtrunA17_Chr5g0434241 | 38.384 | 99 | 56 | 3 | 143 | 239 | 1 | 96 | 9.39e-13 | 64.7 |
Msa0135240 | MtrunA17_Chr5g0407441 | 27.273 | 264 | 161 | 7 | 122 | 368 | 454 | 703 | 1.48e-12 | 69.3 |
Msa0135240 | MtrunA17_Chr3g0146061 | 34.646 | 127 | 78 | 3 | 34 | 156 | 107 | 232 | 1.69e-12 | 69.3 |
Msa0135240 | MtrunA17_Chr3g0146061 | 23.887 | 247 | 158 | 7 | 144 | 368 | 483 | 721 | 6.67e-12 | 67.4 |
Msa0135240 | MtrunA17_Chr6g0450291 | 38.384 | 99 | 56 | 3 | 143 | 239 | 1 | 96 | 2.35e-12 | 65.5 |
Msa0135240 | MtrunA17_Chr5g0419321 | 27.897 | 233 | 149 | 5 | 151 | 372 | 509 | 733 | 2.74e-12 | 68.6 |
Msa0135240 | MtrunA17_Chr6g0450281 | 38.384 | 99 | 56 | 3 | 143 | 239 | 1 | 96 | 4.37e-12 | 64.7 |
Msa0135240 | MtrunA17_Chr6g0450241 | 38.384 | 99 | 56 | 3 | 143 | 239 | 1 | 96 | 4.69e-12 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0135240 | AT5G26340.1 | 76.503 | 366 | 85 | 1 | 40 | 405 | 154 | 518 | 0.0 | 593 |
Msa0135240 | AT4G02050.2 | 58.146 | 356 | 145 | 4 | 40 | 394 | 156 | 508 | 3.21e-158 | 456 |
Msa0135240 | AT4G02050.1 | 58.146 | 356 | 145 | 4 | 40 | 394 | 156 | 508 | 3.21e-158 | 456 |
Msa0135240 | AT1G77210.3 | 58.333 | 348 | 141 | 4 | 40 | 386 | 7 | 351 | 3.26e-145 | 417 |
Msa0135240 | AT1G77210.2 | 58.333 | 348 | 141 | 4 | 40 | 386 | 156 | 500 | 2.75e-143 | 417 |
Msa0135240 | AT1G77210.1 | 58.333 | 348 | 141 | 4 | 40 | 386 | 156 | 500 | 2.75e-143 | 417 |
Msa0135240 | AT1G11260.1 | 55.923 | 363 | 157 | 2 | 40 | 400 | 153 | 514 | 4.65e-143 | 417 |
Msa0135240 | AT1G50310.2 | 53.846 | 364 | 159 | 5 | 38 | 399 | 10 | 366 | 5.88e-143 | 412 |
Msa0135240 | AT3G19940.1 | 53.409 | 352 | 161 | 3 | 40 | 390 | 155 | 504 | 3.10e-142 | 415 |
Msa0135240 | AT1G50310.1 | 53.867 | 362 | 158 | 5 | 40 | 399 | 155 | 509 | 4.07e-141 | 412 |
Msa0135240 | AT3G05960.1 | 57.423 | 357 | 148 | 3 | 40 | 394 | 150 | 504 | 6.02e-137 | 402 |
Msa0135240 | AT5G23270.1 | 56.069 | 346 | 150 | 2 | 40 | 384 | 155 | 499 | 5.80e-136 | 399 |
Msa0135240 | AT5G26250.1 | 57.865 | 356 | 147 | 3 | 40 | 394 | 151 | 504 | 6.29e-136 | 399 |
Msa0135240 | AT4G21480.1 | 56.941 | 353 | 147 | 3 | 40 | 390 | 153 | 502 | 1.49e-133 | 393 |
Msa0135240 | AT3G19930.1 | 51.111 | 360 | 169 | 3 | 40 | 398 | 152 | 505 | 4.26e-127 | 377 |
Msa0135240 | AT3G19930.2 | 51.111 | 360 | 169 | 3 | 40 | 398 | 152 | 505 | 4.26e-127 | 377 |
Msa0135240 | AT1G34580.2 | 46.176 | 353 | 181 | 5 | 40 | 386 | 103 | 452 | 7.34e-114 | 341 |
Msa0135240 | AT1G34580.1 | 46.176 | 353 | 181 | 5 | 40 | 386 | 153 | 502 | 1.32e-113 | 342 |
Msa0135240 | AT1G07340.1 | 50.435 | 345 | 168 | 2 | 41 | 384 | 153 | 495 | 5.09e-111 | 335 |
Msa0135240 | AT5G61520.2 | 46.927 | 358 | 183 | 6 | 40 | 395 | 111 | 463 | 3.38e-109 | 329 |
Msa0135240 | AT5G61520.1 | 46.927 | 358 | 183 | 6 | 40 | 395 | 159 | 511 | 6.50e-109 | 330 |
Msa0135240 | AT2G18480.1 | 31.445 | 353 | 215 | 8 | 42 | 372 | 134 | 481 | 8.14e-46 | 165 |
Msa0135240 | AT2G16120.1 | 30.946 | 349 | 220 | 7 | 42 | 370 | 138 | 485 | 6.18e-44 | 160 |
Msa0135240 | AT2G16130.1 | 30.114 | 352 | 219 | 6 | 42 | 370 | 138 | 485 | 5.13e-43 | 157 |
Msa0135240 | AT4G36670.1 | 32.044 | 362 | 217 | 9 | 33 | 370 | 119 | 475 | 1.23e-42 | 156 |
Msa0135240 | AT3G18830.1 | 29.577 | 355 | 228 | 5 | 38 | 372 | 144 | 496 | 2.44e-42 | 156 |
Msa0135240 | AT2G43330.1 | 28.982 | 383 | 250 | 9 | 33 | 400 | 134 | 509 | 1.30e-41 | 154 |
Msa0135240 | AT2G20780.1 | 28.818 | 347 | 229 | 7 | 33 | 370 | 159 | 496 | 4.26e-39 | 147 |
Msa0135240 | AT2G20780.2 | 28.818 | 347 | 229 | 7 | 33 | 370 | 101 | 438 | 4.87e-39 | 146 |
Msa0135240 | AT1G75220.1 | 31.897 | 348 | 216 | 8 | 31 | 370 | 148 | 482 | 3.18e-37 | 141 |
Msa0135240 | AT5G59250.1 | 32.143 | 364 | 215 | 9 | 34 | 376 | 206 | 558 | 1.36e-36 | 140 |
Msa0135240 | AT2G48020.2 | 28.012 | 332 | 224 | 5 | 41 | 370 | 139 | 457 | 2.01e-36 | 139 |
Msa0135240 | AT2G48020.1 | 28.012 | 332 | 224 | 5 | 41 | 370 | 139 | 457 | 2.01e-36 | 139 |
Msa0135240 | AT5G27350.1 | 28.916 | 332 | 221 | 6 | 41 | 370 | 142 | 460 | 9.27e-36 | 137 |
Msa0135240 | AT3G05150.2 | 29.769 | 346 | 223 | 8 | 41 | 379 | 146 | 478 | 1.12e-35 | 137 |
Msa0135240 | AT5G18840.1 | 28.205 | 351 | 229 | 6 | 34 | 377 | 147 | 481 | 1.15e-35 | 137 |
Msa0135240 | AT3G05150.1 | 29.730 | 333 | 218 | 7 | 41 | 370 | 146 | 465 | 1.77e-35 | 136 |
Msa0135240 | AT3G05150.3 | 29.730 | 333 | 218 | 7 | 41 | 370 | 146 | 465 | 1.77e-35 | 136 |
Msa0135240 | AT5G27360.2 | 28.012 | 332 | 224 | 6 | 41 | 370 | 42 | 360 | 8.66e-35 | 132 |
Msa0135240 | AT5G27360.5 | 28.012 | 332 | 224 | 6 | 41 | 370 | 42 | 360 | 8.66e-35 | 132 |
Msa0135240 | AT5G27360.1 | 27.434 | 339 | 231 | 6 | 41 | 377 | 146 | 471 | 3.12e-34 | 133 |
Msa0135240 | AT3G05165.3 | 27.083 | 336 | 222 | 6 | 41 | 370 | 141 | 459 | 5.78e-34 | 132 |
Msa0135240 | AT3G05165.2 | 27.083 | 336 | 222 | 6 | 41 | 370 | 141 | 459 | 5.78e-34 | 132 |
Msa0135240 | AT3G05165.1 | 27.083 | 336 | 222 | 6 | 41 | 370 | 141 | 459 | 5.78e-34 | 132 |
Msa0135240 | AT5G27360.3 | 27.434 | 339 | 231 | 6 | 41 | 377 | 194 | 519 | 5.91e-34 | 133 |
Msa0135240 | AT5G17010.1 | 30.110 | 362 | 201 | 10 | 40 | 373 | 164 | 501 | 7.52e-34 | 132 |
Msa0135240 | AT5G17010.3 | 30.110 | 362 | 201 | 10 | 40 | 373 | 164 | 501 | 7.52e-34 | 132 |
Msa0135240 | AT5G17010.4 | 30.110 | 362 | 201 | 10 | 40 | 373 | 164 | 501 | 7.52e-34 | 132 |
Msa0135240 | AT1G54730.2 | 27.536 | 345 | 232 | 8 | 34 | 374 | 135 | 465 | 9.03e-34 | 131 |
Msa0135240 | AT1G08930.1 | 30.725 | 345 | 215 | 11 | 33 | 370 | 160 | 487 | 2.06e-33 | 131 |
Msa0135240 | AT1G08930.2 | 30.725 | 345 | 215 | 11 | 33 | 370 | 160 | 487 | 2.06e-33 | 131 |
Msa0135240 | AT1G05030.2 | 27.844 | 334 | 225 | 8 | 41 | 370 | 140 | 461 | 2.73e-33 | 130 |
Msa0135240 | AT1G05030.1 | 27.844 | 334 | 225 | 8 | 41 | 370 | 192 | 513 | 3.93e-33 | 130 |
Msa0135240 | AT1G19450.1 | 29.855 | 345 | 227 | 7 | 31 | 370 | 149 | 483 | 5.48e-33 | 129 |
Msa0135240 | AT1G08890.1 | 29.586 | 338 | 219 | 8 | 41 | 374 | 138 | 460 | 1.57e-32 | 128 |
Msa0135240 | AT1G08900.5 | 30.838 | 334 | 212 | 6 | 41 | 370 | 94 | 412 | 3.04e-32 | 126 |
Msa0135240 | AT1G08900.3 | 30.838 | 334 | 212 | 6 | 41 | 370 | 128 | 446 | 3.51e-32 | 127 |
Msa0135240 | AT3G05400.1 | 31.454 | 337 | 206 | 11 | 41 | 370 | 137 | 455 | 3.62e-32 | 127 |
Msa0135240 | AT1G08900.1 | 30.838 | 334 | 212 | 6 | 41 | 370 | 136 | 454 | 4.28e-32 | 127 |
Msa0135240 | AT1G08900.2 | 30.838 | 334 | 212 | 6 | 41 | 370 | 136 | 454 | 4.28e-32 | 127 |
Msa0135240 | AT1G30220.1 | 31.325 | 249 | 154 | 7 | 33 | 269 | 131 | 374 | 4.40e-32 | 128 |
Msa0135240 | AT3G05400.2 | 31.454 | 337 | 206 | 11 | 41 | 370 | 117 | 435 | 4.61e-32 | 126 |
Msa0135240 | AT3G05160.1 | 26.190 | 336 | 225 | 6 | 41 | 370 | 132 | 450 | 4.83e-32 | 126 |
Msa0135240 | AT3G05160.3 | 26.190 | 336 | 225 | 6 | 41 | 370 | 83 | 401 | 5.69e-32 | 125 |
Msa0135240 | AT3G05160.2 | 26.190 | 336 | 225 | 6 | 41 | 370 | 83 | 401 | 5.69e-32 | 125 |
Msa0135240 | AT3G03090.1 | 30.659 | 349 | 216 | 11 | 40 | 373 | 164 | 501 | 1.71e-31 | 125 |
Msa0135240 | AT5G16150.2 | 29.070 | 344 | 224 | 8 | 33 | 370 | 209 | 538 | 6.04e-31 | 124 |
Msa0135240 | AT5G16150.1 | 29.070 | 344 | 224 | 8 | 33 | 370 | 209 | 538 | 6.04e-31 | 124 |
Msa0135240 | AT5G16150.3 | 29.070 | 344 | 224 | 8 | 33 | 370 | 209 | 538 | 6.04e-31 | 124 |
Msa0135240 | AT3G05155.1 | 27.679 | 336 | 224 | 7 | 41 | 373 | 138 | 457 | 1.21e-30 | 122 |
Msa0135240 | AT1G08920.1 | 28.228 | 333 | 222 | 7 | 41 | 370 | 143 | 461 | 5.29e-30 | 121 |
Msa0135240 | AT1G54730.3 | 27.157 | 313 | 210 | 8 | 34 | 342 | 135 | 433 | 5.77e-29 | 117 |
Msa0135240 | AT3G05165.6 | 26.129 | 310 | 206 | 6 | 41 | 344 | 141 | 433 | 9.30e-29 | 118 |
Msa0135240 | AT4G04750.3 | 26.727 | 333 | 227 | 6 | 42 | 370 | 192 | 511 | 9.76e-29 | 118 |
Msa0135240 | AT4G04750.1 | 26.727 | 333 | 227 | 6 | 42 | 370 | 148 | 467 | 1.01e-28 | 117 |
Msa0135240 | AT4G04750.2 | 26.727 | 333 | 227 | 6 | 42 | 370 | 148 | 467 | 1.01e-28 | 117 |
Msa0135240 | AT4G04760.3 | 29.341 | 334 | 218 | 7 | 42 | 370 | 84 | 404 | 1.22e-28 | 116 |
Msa0135240 | AT4G04760.1 | 29.341 | 334 | 218 | 7 | 42 | 370 | 143 | 463 | 2.55e-28 | 116 |
Msa0135240 | AT3G05165.4 | 28.369 | 282 | 178 | 7 | 41 | 315 | 141 | 405 | 4.00e-28 | 115 |
Msa0135240 | AT3G05165.5 | 28.369 | 282 | 178 | 7 | 41 | 315 | 141 | 405 | 4.00e-28 | 115 |
Msa0135240 | AT1G08920.2 | 27.596 | 337 | 226 | 7 | 41 | 370 | 143 | 468 | 1.05e-27 | 114 |
Msa0135240 | AT1G54730.5 | 26.453 | 344 | 216 | 9 | 34 | 374 | 135 | 444 | 5.87e-27 | 112 |
Msa0135240 | AT1G08920.3 | 28.383 | 303 | 200 | 7 | 41 | 340 | 143 | 431 | 4.64e-26 | 109 |
Msa0135240 | AT4G16480.2 | 32.569 | 218 | 126 | 6 | 42 | 246 | 142 | 351 | 3.48e-25 | 108 |
Msa0135240 | AT4G16480.3 | 32.569 | 218 | 126 | 6 | 42 | 246 | 142 | 351 | 3.48e-25 | 108 |
Msa0135240 | AT4G16480.1 | 32.569 | 218 | 126 | 6 | 42 | 246 | 142 | 351 | 3.48e-25 | 108 |
Msa0135240 | AT1G67300.2 | 25.862 | 290 | 200 | 6 | 36 | 320 | 156 | 435 | 8.44e-25 | 106 |
Msa0135240 | AT2G35740.1 | 31.250 | 240 | 148 | 8 | 42 | 269 | 141 | 375 | 1.58e-24 | 106 |
Msa0135240 | AT1G67300.6 | 25.987 | 304 | 205 | 8 | 36 | 333 | 156 | 445 | 2.61e-24 | 104 |
Msa0135240 | AT1G67300.7 | 25.987 | 304 | 205 | 8 | 36 | 333 | 156 | 445 | 2.61e-24 | 104 |
Msa0135240 | AT1G08900.4 | 29.693 | 293 | 187 | 6 | 41 | 329 | 136 | 413 | 2.88e-24 | 104 |
Msa0135240 | AT1G54730.9 | 27.240 | 279 | 185 | 8 | 34 | 308 | 135 | 399 | 3.67e-24 | 103 |
Msa0135240 | AT1G54730.7 | 27.240 | 279 | 185 | 8 | 34 | 308 | 135 | 399 | 3.67e-24 | 103 |
Msa0135240 | AT1G67300.1 | 26.117 | 291 | 197 | 7 | 36 | 320 | 156 | 434 | 9.14e-24 | 103 |
Msa0135240 | AT1G67300.3 | 26.117 | 291 | 197 | 7 | 36 | 320 | 156 | 434 | 9.14e-24 | 103 |
Msa0135240 | AT1G67300.4 | 26.882 | 279 | 186 | 7 | 36 | 308 | 156 | 422 | 1.63e-23 | 102 |
Msa0135240 | AT1G67300.5 | 26.882 | 279 | 186 | 7 | 36 | 308 | 156 | 422 | 1.63e-23 | 102 |
Msa0135240 | AT2G48020.4 | 30.488 | 246 | 154 | 5 | 41 | 284 | 139 | 369 | 2.45e-23 | 101 |
Msa0135240 | AT1G79820.2 | 27.055 | 292 | 200 | 5 | 43 | 333 | 169 | 448 | 8.31e-23 | 100 |
Msa0135240 | AT1G79820.1 | 27.055 | 292 | 200 | 5 | 43 | 333 | 169 | 448 | 8.31e-23 | 100 |
Msa0135240 | AT5G27360.4 | 27.138 | 269 | 181 | 6 | 41 | 307 | 146 | 401 | 1.77e-22 | 99.4 |
Msa0135240 | AT1G54730.4 | 25.962 | 312 | 194 | 9 | 34 | 342 | 135 | 412 | 3.08e-22 | 98.2 |
Msa0135240 | AT4G04760.2 | 27.353 | 340 | 214 | 8 | 42 | 370 | 143 | 460 | 3.27e-22 | 99.0 |
Msa0135240 | AT1G79820.4 | 26.882 | 279 | 191 | 5 | 43 | 320 | 169 | 435 | 2.03e-21 | 96.3 |
Msa0135240 | AT1G54730.11 | 28.708 | 209 | 136 | 5 | 34 | 239 | 135 | 333 | 8.01e-21 | 93.2 |
Msa0135240 | AT2G48020.3 | 31.841 | 201 | 125 | 4 | 41 | 239 | 139 | 329 | 2.81e-20 | 92.0 |
Msa0135240 | AT1G54730.8 | 25.899 | 278 | 169 | 9 | 34 | 308 | 135 | 378 | 8.18e-18 | 85.1 |
Msa0135240 | AT1G54730.10 | 27.869 | 183 | 122 | 4 | 34 | 213 | 135 | 310 | 1.49e-17 | 83.6 |
Msa0135240 | AT1G54730.6 | 27.869 | 183 | 122 | 4 | 34 | 213 | 135 | 310 | 1.49e-17 | 83.6 |
Msa0135240 | AT3G20460.1 | 22.419 | 339 | 246 | 6 | 41 | 376 | 164 | 488 | 1.43e-16 | 82.0 |
Msa0135240 | AT3G05155.2 | 28.358 | 201 | 129 | 5 | 41 | 239 | 138 | 325 | 2.63e-16 | 79.7 |
Msa0135240 | AT3G51490.3 | 27.126 | 247 | 145 | 9 | 147 | 372 | 436 | 668 | 3.81e-15 | 77.8 |
Msa0135240 | AT3G51490.3 | 32.000 | 125 | 80 | 3 | 36 | 156 | 59 | 182 | 5.44e-12 | 68.2 |
Msa0135240 | AT3G51490.2 | 27.126 | 247 | 145 | 9 | 147 | 372 | 486 | 718 | 3.97e-15 | 77.8 |
Msa0135240 | AT3G51490.2 | 32.000 | 125 | 80 | 3 | 36 | 156 | 109 | 232 | 6.32e-12 | 67.8 |
Msa0135240 | AT4G35300.5 | 26.000 | 250 | 156 | 7 | 144 | 372 | 286 | 527 | 5.32e-12 | 67.8 |
Msa0135240 | AT4G35300.4 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.8 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.6 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.11 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.1 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.10 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.7 | 26.000 | 250 | 156 | 7 | 144 | 372 | 483 | 724 | 5.90e-12 | 68.2 |
Msa0135240 | AT4G35300.9 | 26.000 | 250 | 156 | 7 | 144 | 372 | 473 | 714 | 6.46e-12 | 67.8 |
Msa0135240 | AT4G35300.2 | 26.000 | 250 | 156 | 7 | 144 | 372 | 473 | 714 | 6.46e-12 | 67.8 |
Msa0135240 | AT4G35300.3 | 26.000 | 250 | 156 | 7 | 144 | 372 | 473 | 714 | 6.46e-12 | 67.8 |
Msa0135240 | AT3G51490.1 | 32.000 | 125 | 80 | 3 | 36 | 156 | 109 | 232 | 6.63e-12 | 67.8 |
Msa0135240 | AT3G51490.1 | 25.911 | 247 | 140 | 10 | 147 | 372 | 486 | 710 | 2.50e-11 | 66.2 |
Find 100 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTACTCTGCTGTGATTAC+TGG | 0.220334 | 1_3:-66860036 | Msa0135240:CDS |
CCAGCATTACTCCTCACTTT+AGG | 0.220398 | 1_3:-66860670 | Msa0135240:CDS |
ACGTGATGAGTGTTTGAATT+TGG | 0.236443 | 1_3:-66863428 | Msa0135240:CDS |
CCACGTTCAATGAGACTATT+TGG | 0.243632 | 1_3:+66860625 | None:intergenic |
CAGCATTACTCCTCACTTTA+GGG | 0.249351 | 1_3:-66860669 | Msa0135240:CDS |
AATATATTCGGTTGATAAAC+TGG | 0.252057 | 1_3:-66859983 | Msa0135240:CDS |
TGTCATTTCCATTGCCCTAA+TGG | 0.296156 | 1_3:-66860449 | Msa0135240:intron |
CATCTTCAACTTCACACTTC+TGG | 0.297169 | 1_3:+66863482 | None:intergenic |
ATGCTTTGTTATTTCAAGTT+TGG | 0.300180 | 1_3:-66859664 | Msa0135240:CDS |
CGTGATGAGTGTTTGAATTT+GGG | 0.304238 | 1_3:-66863427 | Msa0135240:CDS |
TGTGGAAGCAGCATTGGTTT+TGG | 0.334417 | 1_3:-66859537 | Msa0135240:CDS |
CTCTGTGTCATCTCTTCAAT+AGG | 0.338403 | 1_3:+66859562 | None:intergenic |
TTGGGGTTGGAGGATATCTC+TGG | 0.356303 | 1_3:-66860707 | Msa0135240:CDS |
CCAGTTCTGTTCAACACATT+GGG | 0.363609 | 1_3:-66860078 | Msa0135240:CDS |
GGTCATGGGGTCCACTTGCT+TGG | 0.367069 | 1_3:-66859795 | Msa0135240:CDS |
TGAAGATGGGACAAGGGAAA+TGG | 0.371000 | 1_3:-66863467 | Msa0135240:CDS |
ATAGGGACATTCTTTGTCTC+AGG | 0.372635 | 1_3:+66859580 | None:intergenic |
AACGATAGTCTCAATATATT+CGG | 0.386732 | 1_3:-66859995 | Msa0135240:CDS |
CACGTTCAATGAGACTATTT+GGG | 0.388376 | 1_3:+66860626 | None:intergenic |
TTTCAGCTTGATATCACTCT+TGG | 0.399756 | 1_3:-66861577 | Msa0135240:CDS |
TGGAGGATATCTCTGGGATT+GGG | 0.399827 | 1_3:-66860700 | Msa0135240:CDS |
TAACAGAATCAAAGGTCATT+GGG | 0.402246 | 1_3:-66860725 | Msa0135240:intron |
CCCAATGTGTTGAACAGAAC+TGG | 0.402584 | 1_3:+66860078 | None:intergenic |
GCAATCTCTGAAAGGAAAAC+TGG | 0.403056 | 1_3:+66861634 | None:intergenic |
TTGGAGGATATCTCTGGGAT+TGG | 0.417371 | 1_3:-66860701 | Msa0135240:CDS |
AACTGGAGCATAGAACATTA+TGG | 0.417549 | 1_3:+66860095 | None:intergenic |
GAAGATGGGACAAGGGAAAT+GGG | 0.420066 | 1_3:-66863466 | Msa0135240:CDS |
AATGCTCCACGTATTCTTGA+AGG | 0.430135 | 1_3:+66861610 | None:intergenic |
AAGATTAGTACAAACCATTA+GGG | 0.436585 | 1_3:+66860435 | None:intergenic |
TGTCAGCATTTGCATGGTCA+TGG | 0.444330 | 1_3:-66859810 | Msa0135240:CDS |
CCACTAGAGACTCGTTCTGC+AGG | 0.462076 | 1_3:-66859751 | Msa0135240:CDS |
GTCAGCATTTGCATGGTCAT+GGG | 0.464567 | 1_3:-66859809 | Msa0135240:CDS |
TCAAATGTTCTTGTCACAAA+TGG | 0.472443 | 1_3:-66859929 | Msa0135240:CDS |
ATAACAGAATCAAAGGTCAT+TGG | 0.475393 | 1_3:-66860726 | Msa0135240:intron |
AGAGAGTGTGGAAGCAGCAT+TGG | 0.481898 | 1_3:-66859543 | Msa0135240:CDS |
CAGAAGTGTGAAGTTGAAGA+TGG | 0.487451 | 1_3:-66863481 | Msa0135240:CDS |
CAGATATTTCAGCAATTCAC+TGG | 0.497047 | 1_3:-66860126 | Msa0135240:CDS |
ATAAGGAACTTACTTGTTGG+TGG | 0.500032 | 1_3:+66861525 | None:intergenic |
GAACGTGGTCACTTGGACAA+AGG | 0.500261 | 1_3:-66860610 | Msa0135240:CDS |
TCCAGTTCTGTTCAACACAT+TGG | 0.500531 | 1_3:-66860079 | Msa0135240:CDS |
GGCAAGTCGTGTTGCTAAAG+AGG | 0.500547 | 1_3:-66860521 | Msa0135240:CDS |
GAATCAAAGGTCATTGGGGT+TGG | 0.506170 | 1_3:-66860720 | Msa0135240:CDS |
TCTGTGTCATCTCTTCAATA+GGG | 0.513178 | 1_3:+66859563 | None:intergenic |
CCTAAAGTGAGGAGTAATGC+TGG | 0.516671 | 1_3:+66860670 | None:intergenic |
TCAAAGGTCATTGGGGTTGG+AGG | 0.518817 | 1_3:-66860717 | Msa0135240:CDS |
CTTTCGAGAGTTCCTCAGAA+TGG | 0.520137 | 1_3:+66859872 | None:intergenic |
TTTAGGGGCTTACTTAGTAG+TGG | 0.523678 | 1_3:-66860653 | Msa0135240:CDS |
TCTCATTGAACGTGGTCACT+TGG | 0.531256 | 1_3:-66860617 | Msa0135240:CDS |
AAGGGAAATGGGTGTGACTC+AGG | 0.532064 | 1_3:-66863455 | Msa0135240:CDS |
CATTCTTTGTCTCAGGGACA+AGG | 0.534348 | 1_3:+66859587 | None:intergenic |
AAGAGATGACACAGAGAGTG+TGG | 0.538985 | 1_3:-66859555 | Msa0135240:CDS |
GAGACAAGATCATTTCTGCC+AGG | 0.539287 | 1_3:+66859457 | None:intergenic |
TCTAGTGGAAATATCTCACT+TGG | 0.540947 | 1_3:+66859766 | None:intergenic |
TGCAGCTCTTGTAGTTGTGA+TGG | 0.545486 | 1_3:-66859845 | Msa0135240:CDS |
TGGGGTTGGAGGATATCTCT+GGG | 0.548277 | 1_3:-66860706 | Msa0135240:CDS |
TGAAATAACAAAGCATTGAA+AGG | 0.549846 | 1_3:+66859671 | None:intergenic |
CACTAGAGACTCGTTCTGCA+GGG | 0.555738 | 1_3:-66859750 | Msa0135240:CDS |
AGCATTACTCCTCACTTTAG+GGG | 0.556506 | 1_3:-66860668 | Msa0135240:CDS |
TTGAAGGTGCAATCTCTGAA+AGG | 0.568570 | 1_3:+66861626 | None:intergenic |
AGACAAGATCATTTCTGCCA+GGG | 0.570266 | 1_3:+66859458 | None:intergenic |
GAGGTCGGTTATTGCGCTTG+AGG | 0.575455 | 1_3:+66860476 | None:intergenic |
CGAAAGCTATTACTCGAAGC+TGG | 0.575954 | 1_3:-66859955 | Msa0135240:CDS |
AGTACAAACCATTAGGGCAA+TGG | 0.580130 | 1_3:+66860441 | None:intergenic |
GCTGTTCTGAGAAAGATTCG+TGG | 0.584754 | 1_3:-66860583 | Msa0135240:CDS |
TTCACACTTCTGGCTGCGTG+TGG | 0.585004 | 1_3:+66863492 | None:intergenic |
GTGCAATGACAGCAGTGAAG+AGG | 0.587387 | 1_3:+66859701 | None:intergenic |
AGAAGTGTGAAGTTGAAGAT+GGG | 0.587997 | 1_3:-66863480 | Msa0135240:CDS |
CGCTTGAGGAGATTTCTGAA+CGG | 0.588562 | 1_3:+66860490 | None:intergenic |
TAGGGACATTCTTTGTCTCA+GGG | 0.588827 | 1_3:+66859581 | None:intergenic |
CTAAAGTGAGGAGTAATGCT+GGG | 0.591713 | 1_3:+66860671 | None:intergenic |
ATGGTGATAGCAATTGTACT+AGG | 0.593741 | 1_3:-66859910 | Msa0135240:CDS |
ATTCTGAGGAACTCTCGAAA+GGG | 0.594512 | 1_3:-66859870 | Msa0135240:CDS |
CATTCTGAGGAACTCTCGAA+AGG | 0.596408 | 1_3:-66859871 | Msa0135240:CDS |
CTCTGAAAGGAAAACTGGCA+CGG | 0.599482 | 1_3:+66861639 | None:intergenic |
CCTGCAGAACGAGTCTCTAG+TGG | 0.601195 | 1_3:+66859751 | None:intergenic |
GTGAAGTTGAAGATGGGACA+AGG | 0.601632 | 1_3:-66863474 | Msa0135240:CDS |
TCTTTGCATAACAGAATCAA+AGG | 0.602087 | 1_3:-66860733 | Msa0135240:intron |
ATATATTCGGTTGATAAACT+GGG | 0.603944 | 1_3:-66859982 | Msa0135240:CDS |
GTGATGAGTGTTTGAATTTG+GGG | 0.604997 | 1_3:-66863426 | Msa0135240:CDS |
GTACATGGTGGAAATTCCCC+TGG | 0.608228 | 1_3:-66859475 | Msa0135240:CDS |
TGTTGGTGGCATAGTTGACA+AGG | 0.611158 | 1_3:+66861539 | None:intergenic |
AGGATATCTCTGGGATTGGG+AGG | 0.614479 | 1_3:-66860697 | Msa0135240:CDS |
TGAGTTCTTAGAGTTAGTAG+AGG | 0.615275 | 1_3:-66860542 | Msa0135240:CDS |
TCAGCATTTGCATGGTCATG+GGG | 0.621192 | 1_3:-66859808 | Msa0135240:CDS |
ATTGAAGATGAGAAAGTACA+TGG | 0.621432 | 1_3:-66859490 | Msa0135240:CDS |
GACAAGATCATTTCTGCCAG+GGG | 0.621853 | 1_3:+66859459 | None:intergenic |
TGAAGTTGAAGATGGGACAA+GGG | 0.623212 | 1_3:-66863473 | Msa0135240:CDS |
CTAAGTAAGCCCCTAAAGTG+AGG | 0.625282 | 1_3:+66860659 | None:intergenic |
CAAAGTGAAGGACCATTCTG+AGG | 0.625954 | 1_3:-66859884 | Msa0135240:CDS |
TCTACTAACTCTAAGAACTC+AGG | 0.628704 | 1_3:+66860544 | None:intergenic |
GCAATGGAAATGACAAGTTG+AGG | 0.629289 | 1_3:+66860457 | None:intergenic |
TCTGAGAAAGATTCGTGGCA+CGG | 0.641034 | 1_3:-66860578 | Msa0135240:CDS |
TGTACTAGGAATCAAAGTGA+AGG | 0.642063 | 1_3:-66859896 | Msa0135240:CDS |
TGGAAATGACAAGTTGAGGT+CGG | 0.646516 | 1_3:+66860461 | None:intergenic |
ACGTTCAATGAGACTATTTG+GGG | 0.648447 | 1_3:+66860627 | None:intergenic |
CTTGGAATAAGCCAAGCAAG+TGG | 0.653091 | 1_3:+66859784 | None:intergenic |
AACAGAATCAAAGGTCATTG+GGG | 0.657099 | 1_3:-66860724 | Msa0135240:intron |
CCAAATAGTCTCATTGAACG+TGG | 0.670098 | 1_3:-66860625 | Msa0135240:CDS |
GAAGATGAGAAAGTACATGG+TGG | 0.696620 | 1_3:-66859487 | Msa0135240:CDS |
ATTGCACCTTCAAGAATACG+TGG | 0.700035 | 1_3:-66861616 | Msa0135240:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTTGTTTTTTTTGA+GGG | + | chr1_3:66859752-66859771 | None:intergenic | 10.0% |
!!! | ATATTTTTTTGTTTTTTTTG+AGG | + | chr1_3:66859753-66859772 | None:intergenic | 10.0% |
!! | TAAATAGAAAAATGATAAAA+AGG | - | chr1_3:66859821-66859840 | Msa0135240:CDS | 10.0% |
!! | AATATCTCAAAATTAATTTA+AGG | + | chr1_3:66860169-66860188 | None:intergenic | 10.0% |
!!! | TATAAGTTAAATTTTGTTTT+GGG | + | chr1_3:66860403-66860422 | None:intergenic | 10.0% |
!!! | TTATAAGTTAAATTTTGTTT+TGG | + | chr1_3:66860404-66860423 | None:intergenic | 10.0% |
!!! | AATTGATTTTACATTTATTT+TGG | - | chr1_3:66861564-66861583 | Msa0135240:CDS | 10.0% |
!! | CCAAAAAAAAATAATTAAAA+GGG | + | chr1_3:66861659-66861678 | None:intergenic | 10.0% |
!! | ACCAAAAAAAAATAATTAAA+AGG | + | chr1_3:66861660-66861679 | None:intergenic | 10.0% |
!! | AACTATTGAAATAATTAAAA+GGG | + | chr1_3:66861691-66861710 | None:intergenic | 10.0% |
!! | TAACTATTGAAATAATTAAA+AGG | + | chr1_3:66861692-66861711 | None:intergenic | 10.0% |
!!! | GTACTATATATATTTTAATT+CGG | + | chr1_3:66861794-66861813 | None:intergenic | 10.0% |
!!! | CTAAGTAAAAATAATAATTT+TGG | - | chr1_3:66861820-66861839 | Msa0135240:intron | 10.0% |
!!! | TATTTTTTTGTTTTTTTTGA+GGG | + | chr1_3:66859752-66859771 | None:intergenic | 10.0% |
!!! | ATATTTTTTTGTTTTTTTTG+AGG | + | chr1_3:66859753-66859772 | None:intergenic | 10.0% |
!! | TAAATAGAAAAATGATAAAA+AGG | - | chr1_3:66859821-66859840 | Msa0135240:CDS | 10.0% |
!! | AATATCTCAAAATTAATTTA+AGG | + | chr1_3:66860169-66860188 | None:intergenic | 10.0% |
!!! | TATAAGTTAAATTTTGTTTT+GGG | + | chr1_3:66860403-66860422 | None:intergenic | 10.0% |
!!! | TTATAAGTTAAATTTTGTTT+TGG | + | chr1_3:66860404-66860423 | None:intergenic | 10.0% |
!!! | AATTGATTTTACATTTATTT+TGG | - | chr1_3:66861564-66861583 | Msa0135240:CDS | 10.0% |
!! | CCAAAAAAAAATAATTAAAA+GGG | + | chr1_3:66861659-66861678 | None:intergenic | 10.0% |
!! | ACCAAAAAAAAATAATTAAA+AGG | + | chr1_3:66861660-66861679 | None:intergenic | 10.0% |
!! | AACTATTGAAATAATTAAAA+GGG | + | chr1_3:66861691-66861710 | None:intergenic | 10.0% |
!! | TAACTATTGAAATAATTAAA+AGG | + | chr1_3:66861692-66861711 | None:intergenic | 10.0% |
!!! | GTACTATATATATTTTAATT+CGG | + | chr1_3:66861794-66861813 | None:intergenic | 10.0% |
!!! | CTAAGTAAAAATAATAATTT+TGG | - | chr1_3:66861820-66861839 | Msa0135240:intron | 10.0% |
!!! | AATTTAGGTTTTATTATGAT+TGG | - | chr1_3:66859572-66859591 | Msa0135240:CDS | 15.0% |
!!! | ATTTAGGTTTTATTATGATT+GGG | - | chr1_3:66859573-66859592 | Msa0135240:CDS | 15.0% |
!!! | GTTTAATTTTGATTTAATCA+AGG | - | chr1_3:66859978-66859997 | Msa0135240:CDS | 15.0% |
!! | TTAATTTAAGGAAAATTCTA+CGG | + | chr1_3:66860157-66860176 | None:intergenic | 15.0% |
!! | ATAGCAAAATTTGTATTTAT+TGG | - | chr1_3:66860488-66860507 | Msa0135240:CDS | 15.0% |
!! | AAATAATATAAAGATTTCCT+TGG | - | chr1_3:66860829-66860848 | Msa0135240:intron | 15.0% |
!! | AATAATATAAAGATTTCCTT+GGG | - | chr1_3:66860830-66860849 | Msa0135240:intron | 15.0% |
!! | ATAAATAAATAAAGGTTTCT+TGG | - | chr1_3:66860864-66860883 | Msa0135240:intron | 15.0% |
!!! | GAACTTTTTTTTTTTTTTGA+GGG | + | chr1_3:66861096-66861115 | None:intergenic | 15.0% |
!!! | CCCTTTTAATTATTTTTTTT+TGG | - | chr1_3:66861656-66861675 | Msa0135240:intron | 15.0% |
!! | TTCTATATTAAGAATTTCTT+TGG | + | chr1_3:66862094-66862113 | None:intergenic | 15.0% |
!! | TCAATAAAAGGTTATAAAAA+GGG | + | chr1_3:66862733-66862752 | None:intergenic | 15.0% |
!! | ATCAATAAAAGGTTATAAAA+AGG | + | chr1_3:66862734-66862753 | None:intergenic | 15.0% |
!!! | AATTTAGGTTTTATTATGAT+TGG | - | chr1_3:66859572-66859591 | Msa0135240:CDS | 15.0% |
!!! | ATTTAGGTTTTATTATGATT+GGG | - | chr1_3:66859573-66859592 | Msa0135240:CDS | 15.0% |
!!! | GTTTAATTTTGATTTAATCA+AGG | - | chr1_3:66859978-66859997 | Msa0135240:CDS | 15.0% |
!! | TTAATTTAAGGAAAATTCTA+CGG | + | chr1_3:66860157-66860176 | None:intergenic | 15.0% |
!! | ATAGCAAAATTTGTATTTAT+TGG | - | chr1_3:66860488-66860507 | Msa0135240:CDS | 15.0% |
!! | AAATAATATAAAGATTTCCT+TGG | - | chr1_3:66860829-66860848 | Msa0135240:intron | 15.0% |
!! | AATAATATAAAGATTTCCTT+GGG | - | chr1_3:66860830-66860849 | Msa0135240:intron | 15.0% |
!! | ATAAATAAATAAAGGTTTCT+TGG | - | chr1_3:66860864-66860883 | Msa0135240:intron | 15.0% |
!!! | GAACTTTTTTTTTTTTTTGA+GGG | + | chr1_3:66861096-66861115 | None:intergenic | 15.0% |
!!! | CCCTTTTAATTATTTTTTTT+TGG | - | chr1_3:66861656-66861675 | Msa0135240:intron | 15.0% |
!! | TTCTATATTAAGAATTTCTT+TGG | + | chr1_3:66862094-66862113 | None:intergenic | 15.0% |
!! | TCAATAAAAGGTTATAAAAA+GGG | + | chr1_3:66862733-66862752 | None:intergenic | 15.0% |
!! | ATCAATAAAAGGTTATAAAA+AGG | + | chr1_3:66862734-66862753 | None:intergenic | 15.0% |
!!! | TTTTCTGGTTTGTTAAATTT+AGG | - | chr1_3:66859557-66859576 | Msa0135240:CDS | 20.0% |
!!! | TTTAGGTTTTATTATGATTG+GGG | - | chr1_3:66859574-66859593 | Msa0135240:CDS | 20.0% |
!! | TGCAATAAGTAAAAATATAG+TGG | - | chr1_3:66860008-66860027 | Msa0135240:CDS | 20.0% |
!!! | AATTACTTTTATCTTACGAT+TGG | + | chr1_3:66860636-66860655 | None:intergenic | 20.0% |
!! | GGTATAGATATAATAATCTA+AGG | - | chr1_3:66860728-66860747 | Msa0135240:intron | 20.0% |
!!! | GGAACTTTTTTTTTTTTTTG+AGG | + | chr1_3:66861097-66861116 | None:intergenic | 20.0% |
!!! | TCTTATTTTAGTCATAACTT+TGG | - | chr1_3:66861137-66861156 | Msa0135240:intron | 20.0% |
!! | TGACATATTAGTTCATTAAT+TGG | - | chr1_3:66861478-66861497 | Msa0135240:intron | 20.0% |
!! | TTATATAAAAGTCTAACACA+GGG | - | chr1_3:66861587-66861606 | Msa0135240:CDS | 20.0% |
!!! | ACAATTTTATTGTTTTATCC+AGG | + | chr1_3:66861635-66861654 | None:intergenic | 20.0% |
!!! | AAGCATATGTGTTATAATTT+TGG | + | chr1_3:66862050-66862069 | None:intergenic | 20.0% |
!! | ATAATTCAGCTATCAATAAA+AGG | + | chr1_3:66862745-66862764 | None:intergenic | 20.0% |
!!! | TTTTCTGGTTTGTTAAATTT+AGG | - | chr1_3:66859557-66859576 | Msa0135240:CDS | 20.0% |
!!! | TTTAGGTTTTATTATGATTG+GGG | - | chr1_3:66859574-66859593 | Msa0135240:CDS | 20.0% |
!! | TGCAATAAGTAAAAATATAG+TGG | - | chr1_3:66860008-66860027 | Msa0135240:CDS | 20.0% |
!!! | AATTACTTTTATCTTACGAT+TGG | + | chr1_3:66860636-66860655 | None:intergenic | 20.0% |
!! | GGTATAGATATAATAATCTA+AGG | - | chr1_3:66860728-66860747 | Msa0135240:intron | 20.0% |
!!! | GGAACTTTTTTTTTTTTTTG+AGG | + | chr1_3:66861097-66861116 | None:intergenic | 20.0% |
!!! | TCTTATTTTAGTCATAACTT+TGG | - | chr1_3:66861137-66861156 | Msa0135240:intron | 20.0% |
!! | TGACATATTAGTTCATTAAT+TGG | - | chr1_3:66861478-66861497 | Msa0135240:intron | 20.0% |
!! | TTATATAAAAGTCTAACACA+GGG | - | chr1_3:66861587-66861606 | Msa0135240:CDS | 20.0% |
!!! | ACAATTTTATTGTTTTATCC+AGG | + | chr1_3:66861635-66861654 | None:intergenic | 20.0% |
!!! | AAGCATATGTGTTATAATTT+TGG | + | chr1_3:66862050-66862069 | None:intergenic | 20.0% |
!! | ATAATTCAGCTATCAATAAA+AGG | + | chr1_3:66862745-66862764 | None:intergenic | 20.0% |
! | TTCTGAGTTAAGAAAAAAGA+TGG | - | chr1_3:66859598-66859617 | Msa0135240:CDS | 25.0% |
! | TAAGAAAAAAGATGGAAGTA+AGG | - | chr1_3:66859606-66859625 | Msa0135240:CDS | 25.0% |
!!! | GTATTAGGTGAATATTTTTG+TGG | - | chr1_3:66859650-66859669 | Msa0135240:CDS | 25.0% |
!!! | TTTTTTGTTTTTTTTGAGGG+AGG | + | chr1_3:66859749-66859768 | None:intergenic | 25.0% |
!! | TATTGTACATTTTGCTCATA+CGG | + | chr1_3:66860038-66860057 | None:intergenic | 25.0% |
! | TTCTAATGACTTTACCAAAA+AGG | - | chr1_3:66860114-66860133 | Msa0135240:CDS | 25.0% |
!!! | TGCTAACTTTTTCATCTAAT+TGG | - | chr1_3:66860375-66860394 | Msa0135240:intron | 25.0% |
! | TGAAAACATTCATAAATCAC+AGG | - | chr1_3:66860444-66860463 | Msa0135240:intron | 25.0% |
!! | ACAAAAGTTATAGTCACTTT+AGG | - | chr1_3:66860530-66860549 | Msa0135240:CDS | 25.0% |
!! | TCACTTTAGGAAAAACAAAA+AGG | - | chr1_3:66860543-66860562 | Msa0135240:CDS | 25.0% |
! | TATCCTAAACTTTCAATCAA+TGG | - | chr1_3:66860707-66860726 | Msa0135240:CDS | 25.0% |
!! | ATACCATTGATTGAAAGTTT+AGG | + | chr1_3:66860713-66860732 | None:intergenic | 25.0% |
!!! | ACCAAAAGGTTTTAAAAGTT+CGG | + | chr1_3:66860799-66860818 | None:intergenic | 25.0% |
!!! | TTTATTTTTACAAAGTCCCA+AGG | + | chr1_3:66860849-66860868 | None:intergenic | 25.0% |
! | AGTATTACTTAAGGAATCAA+AGG | + | chr1_3:66861169-66861188 | None:intergenic | 25.0% |
!!! | AGTCACTAATATTGTTTTGA+TGG | - | chr1_3:66861289-66861308 | Msa0135240:intron | 25.0% |
! | ATTATAAGGAACTTACTTGT+TGG | + | chr1_3:66861439-66861458 | None:intergenic | 25.0% |
! | AAGGATGCAATACAATTATA+AGG | + | chr1_3:66861453-66861472 | None:intergenic | 25.0% |
! | GAACTAATATGTCAAACAAA+AGG | + | chr1_3:66861472-66861491 | None:intergenic | 25.0% |
! | GTTATATAAAAGTCTAACAC+AGG | - | chr1_3:66861586-66861605 | Msa0135240:CDS | 25.0% |
! | AAGATTAGTACAAACCATTA+GGG | + | chr1_3:66862526-66862545 | None:intergenic | 25.0% |
! | TAAGATTAGTACAAACCATT+AGG | + | chr1_3:66862527-66862546 | None:intergenic | 25.0% |
!! | TATTTTCGCTATTGCAATTA+GGG | + | chr1_3:66862672-66862691 | None:intergenic | 25.0% |
!! | TTATTTTCGCTATTGCAATT+AGG | + | chr1_3:66862673-66862692 | None:intergenic | 25.0% |
! | AATAAAAAACTAAGATGTCG+CGG | - | chr1_3:66862688-66862707 | Msa0135240:intron | 25.0% |
! | TTTGAGCAACATTAATGAAA+AGG | + | chr1_3:66862799-66862818 | None:intergenic | 25.0% |
! | TCATTAATGTTGCTCAAATA+TGG | - | chr1_3:66862801-66862820 | Msa0135240:intron | 25.0% |
! | AACGATAGTCTCAATATATT+CGG | - | chr1_3:66862963-66862982 | Msa0135240:intron | 25.0% |
!!! | AATATATTCGGTTGATAAAC+TGG | - | chr1_3:66862975-66862994 | Msa0135240:intron | 25.0% |
!!! | ATATATTCGGTTGATAAACT+GGG | - | chr1_3:66862976-66862995 | Msa0135240:intron | 25.0% |
!!! | TGAAATAACAAAGCATTGAA+AGG | + | chr1_3:66863290-66863309 | None:intergenic | 25.0% |
!!! | ATGCTTTGTTATTTCAAGTT+TGG | - | chr1_3:66863294-66863313 | Msa0135240:intron | 25.0% |
! | TTCTGAGTTAAGAAAAAAGA+TGG | - | chr1_3:66859598-66859617 | Msa0135240:CDS | 25.0% |
! | TAAGAAAAAAGATGGAAGTA+AGG | - | chr1_3:66859606-66859625 | Msa0135240:CDS | 25.0% |
!!! | GTATTAGGTGAATATTTTTG+TGG | - | chr1_3:66859650-66859669 | Msa0135240:CDS | 25.0% |
!!! | TTTTTTGTTTTTTTTGAGGG+AGG | + | chr1_3:66859749-66859768 | None:intergenic | 25.0% |
!! | TATTGTACATTTTGCTCATA+CGG | + | chr1_3:66860038-66860057 | None:intergenic | 25.0% |
! | TTCTAATGACTTTACCAAAA+AGG | - | chr1_3:66860114-66860133 | Msa0135240:CDS | 25.0% |
!!! | TGCTAACTTTTTCATCTAAT+TGG | - | chr1_3:66860375-66860394 | Msa0135240:intron | 25.0% |
! | TGAAAACATTCATAAATCAC+AGG | - | chr1_3:66860444-66860463 | Msa0135240:intron | 25.0% |
!! | ACAAAAGTTATAGTCACTTT+AGG | - | chr1_3:66860530-66860549 | Msa0135240:CDS | 25.0% |
!! | TCACTTTAGGAAAAACAAAA+AGG | - | chr1_3:66860543-66860562 | Msa0135240:CDS | 25.0% |
! | TATCCTAAACTTTCAATCAA+TGG | - | chr1_3:66860707-66860726 | Msa0135240:CDS | 25.0% |
!! | ATACCATTGATTGAAAGTTT+AGG | + | chr1_3:66860713-66860732 | None:intergenic | 25.0% |
!!! | ACCAAAAGGTTTTAAAAGTT+CGG | + | chr1_3:66860799-66860818 | None:intergenic | 25.0% |
!!! | TTTATTTTTACAAAGTCCCA+AGG | + | chr1_3:66860849-66860868 | None:intergenic | 25.0% |
! | AGTATTACTTAAGGAATCAA+AGG | + | chr1_3:66861169-66861188 | None:intergenic | 25.0% |
!!! | AGTCACTAATATTGTTTTGA+TGG | - | chr1_3:66861289-66861308 | Msa0135240:intron | 25.0% |
! | ATTATAAGGAACTTACTTGT+TGG | + | chr1_3:66861439-66861458 | None:intergenic | 25.0% |
! | AAGGATGCAATACAATTATA+AGG | + | chr1_3:66861453-66861472 | None:intergenic | 25.0% |
! | GAACTAATATGTCAAACAAA+AGG | + | chr1_3:66861472-66861491 | None:intergenic | 25.0% |
! | GTTATATAAAAGTCTAACAC+AGG | - | chr1_3:66861586-66861605 | Msa0135240:CDS | 25.0% |
! | AAGATTAGTACAAACCATTA+GGG | + | chr1_3:66862526-66862545 | None:intergenic | 25.0% |
! | TAAGATTAGTACAAACCATT+AGG | + | chr1_3:66862527-66862546 | None:intergenic | 25.0% |
!! | TATTTTCGCTATTGCAATTA+GGG | + | chr1_3:66862672-66862691 | None:intergenic | 25.0% |
!! | TTATTTTCGCTATTGCAATT+AGG | + | chr1_3:66862673-66862692 | None:intergenic | 25.0% |
! | AATAAAAAACTAAGATGTCG+CGG | - | chr1_3:66862688-66862707 | Msa0135240:intron | 25.0% |
! | TTTGAGCAACATTAATGAAA+AGG | + | chr1_3:66862799-66862818 | None:intergenic | 25.0% |
! | TCATTAATGTTGCTCAAATA+TGG | - | chr1_3:66862801-66862820 | Msa0135240:intron | 25.0% |
! | AACGATAGTCTCAATATATT+CGG | - | chr1_3:66862963-66862982 | Msa0135240:intron | 25.0% |
!!! | AATATATTCGGTTGATAAAC+TGG | - | chr1_3:66862975-66862994 | Msa0135240:intron | 25.0% |
!!! | ATATATTCGGTTGATAAACT+GGG | - | chr1_3:66862976-66862995 | Msa0135240:intron | 25.0% |
!!! | TGAAATAACAAAGCATTGAA+AGG | + | chr1_3:66863290-66863309 | None:intergenic | 25.0% |
!!! | ATGCTTTGTTATTTCAAGTT+TGG | - | chr1_3:66863294-66863313 | Msa0135240:intron | 25.0% |
! | TTTGAATTTGGGGATTTTTC+TGG | - | chr1_3:66859542-66859561 | Msa0135240:CDS | 30.0% |
AGGATATTCAAGCAATTTGA+AGG | - | chr1_3:66859626-66859645 | Msa0135240:CDS | 30.0% | |
! | AAGCAATTTGAAGGTGTATT+AGG | - | chr1_3:66859635-66859654 | Msa0135240:CDS | 30.0% |
!! | GTGCATTTTAAGGAAGATAA+AGG | - | chr1_3:66859852-66859871 | Msa0135240:CDS | 30.0% |
AGGAAGATAAAGGACTAATA+CGG | - | chr1_3:66859862-66859881 | Msa0135240:CDS | 30.0% | |
! | AGTTGTTAGAATGACCTTTT+TGG | + | chr1_3:66860131-66860150 | None:intergenic | 30.0% |
TTGGACTTATGCTAATAGTA+AGG | - | chr1_3:66860507-66860526 | Msa0135240:CDS | 30.0% | |
AGAAAAAGAATGATGCATAG+TGG | - | chr1_3:66860770-66860789 | Msa0135240:intron | 30.0% | |
!!! | GAACTTTTAAAACCTTTTGG+TGG | - | chr1_3:66860798-66860817 | Msa0135240:intron | 30.0% |
AGAATACTTTCATGCCAAAA+AGG | + | chr1_3:66860934-66860953 | None:intergenic | 30.0% | |
!!! | TTTTTTGAGGGAACAATGAA+TGG | + | chr1_3:66861084-66861103 | None:intergenic | 30.0% |
ATAGAGATAGCTACAATGAA+TGG | + | chr1_3:66861118-66861137 | None:intergenic | 30.0% | |
GTAGCATACAGTATTACTTA+AGG | + | chr1_3:66861178-66861197 | None:intergenic | 30.0% | |
TCACACTTTGTGATAACAAT+TGG | - | chr1_3:66861258-66861277 | Msa0135240:intron | 30.0% | |
!!! | TTGTGATAACAATTGGCTTT+TGG | - | chr1_3:66861265-66861284 | Msa0135240:intron | 30.0% |
!!! | AATATTGTTTTGATGGAGAC+AGG | - | chr1_3:66861296-66861315 | Msa0135240:intron | 30.0% |
GCTAAAAATTCGAGAATTGT+GGG | - | chr1_3:66861936-66861955 | Msa0135240:intron | 30.0% | |
! | ACGCATACATTTTATATGCT+CGG | + | chr1_3:66861975-66861994 | None:intergenic | 30.0% |
TCTTTGCATAACAGAATCAA+AGG | - | chr1_3:66862225-66862244 | Msa0135240:intron | 30.0% | |
ATAACAGAATCAAAGGTCAT+TGG | - | chr1_3:66862232-66862251 | Msa0135240:intron | 30.0% | |
TAACAGAATCAAAGGTCATT+GGG | - | chr1_3:66862233-66862252 | Msa0135240:intron | 30.0% | |
CATAGATAATATGATAGCCA+AGG | - | chr1_3:66862565-66862584 | Msa0135240:intron | 30.0% | |
!!! | ATAGCCAAGGTTTTAATTCA+TGG | - | chr1_3:66862578-66862597 | Msa0135240:intron | 30.0% |
TCAAATGTTCTTGTCACAAA+TGG | - | chr1_3:66863029-66863048 | Msa0135240:intron | 30.0% | |
! | ATTGAAGATGAGAAAGTACA+TGG | - | chr1_3:66863468-66863487 | Msa0135240:CDS | 30.0% |
! | TTTGAATTTGGGGATTTTTC+TGG | - | chr1_3:66859542-66859561 | Msa0135240:CDS | 30.0% |
AGGATATTCAAGCAATTTGA+AGG | - | chr1_3:66859626-66859645 | Msa0135240:CDS | 30.0% | |
! | AAGCAATTTGAAGGTGTATT+AGG | - | chr1_3:66859635-66859654 | Msa0135240:CDS | 30.0% |
!! | GTGCATTTTAAGGAAGATAA+AGG | - | chr1_3:66859852-66859871 | Msa0135240:CDS | 30.0% |
AGGAAGATAAAGGACTAATA+CGG | - | chr1_3:66859862-66859881 | Msa0135240:CDS | 30.0% | |
! | AGTTGTTAGAATGACCTTTT+TGG | + | chr1_3:66860131-66860150 | None:intergenic | 30.0% |
TTGGACTTATGCTAATAGTA+AGG | - | chr1_3:66860507-66860526 | Msa0135240:CDS | 30.0% | |
AGAAAAAGAATGATGCATAG+TGG | - | chr1_3:66860770-66860789 | Msa0135240:intron | 30.0% | |
!!! | GAACTTTTAAAACCTTTTGG+TGG | - | chr1_3:66860798-66860817 | Msa0135240:intron | 30.0% |
AGAATACTTTCATGCCAAAA+AGG | + | chr1_3:66860934-66860953 | None:intergenic | 30.0% | |
!!! | TTTTTTGAGGGAACAATGAA+TGG | + | chr1_3:66861084-66861103 | None:intergenic | 30.0% |
ATAGAGATAGCTACAATGAA+TGG | + | chr1_3:66861118-66861137 | None:intergenic | 30.0% | |
GTAGCATACAGTATTACTTA+AGG | + | chr1_3:66861178-66861197 | None:intergenic | 30.0% | |
TCACACTTTGTGATAACAAT+TGG | - | chr1_3:66861258-66861277 | Msa0135240:intron | 30.0% | |
!!! | TTGTGATAACAATTGGCTTT+TGG | - | chr1_3:66861265-66861284 | Msa0135240:intron | 30.0% |
!!! | AATATTGTTTTGATGGAGAC+AGG | - | chr1_3:66861296-66861315 | Msa0135240:intron | 30.0% |
GCTAAAAATTCGAGAATTGT+GGG | - | chr1_3:66861936-66861955 | Msa0135240:intron | 30.0% | |
! | ACGCATACATTTTATATGCT+CGG | + | chr1_3:66861975-66861994 | None:intergenic | 30.0% |
TCTTTGCATAACAGAATCAA+AGG | - | chr1_3:66862225-66862244 | Msa0135240:intron | 30.0% | |
ATAACAGAATCAAAGGTCAT+TGG | - | chr1_3:66862232-66862251 | Msa0135240:intron | 30.0% | |
TAACAGAATCAAAGGTCATT+GGG | - | chr1_3:66862233-66862252 | Msa0135240:intron | 30.0% | |
CATAGATAATATGATAGCCA+AGG | - | chr1_3:66862565-66862584 | Msa0135240:intron | 30.0% | |
!!! | ATAGCCAAGGTTTTAATTCA+TGG | - | chr1_3:66862578-66862597 | Msa0135240:intron | 30.0% |
TCAAATGTTCTTGTCACAAA+TGG | - | chr1_3:66863029-66863048 | Msa0135240:intron | 30.0% | |
! | ATTGAAGATGAGAAAGTACA+TGG | - | chr1_3:66863468-66863487 | Msa0135240:CDS | 30.0% |
! | AGAAGTGTGAAGTTGAAGAT+GGG | - | chr1_3:66859478-66859497 | Msa0135240:CDS | 35.0% |
ACGTGATGAGTGTTTGAATT+TGG | - | chr1_3:66859530-66859549 | Msa0135240:CDS | 35.0% | |
CGTGATGAGTGTTTGAATTT+GGG | - | chr1_3:66859531-66859550 | Msa0135240:CDS | 35.0% | |
GTGATGAGTGTTTGAATTTG+GGG | - | chr1_3:66859532-66859551 | Msa0135240:CDS | 35.0% | |
!!! | GGATTGACTTGTGCATTTTA+AGG | - | chr1_3:66859842-66859861 | Msa0135240:CDS | 35.0% |
GGAAGATAAAGGACTAATAC+GGG | - | chr1_3:66859863-66859882 | Msa0135240:CDS | 35.0% | |
CGGGAAGAAGAAAAAGATAA+AGG | - | chr1_3:66859882-66859901 | Msa0135240:CDS | 35.0% | |
!!! | GCCGAACTTTTAAAACCTTT+TGG | - | chr1_3:66860795-66860814 | Msa0135240:intron | 35.0% |
! | ATTTGTTAGTTGCCACCAAA+AGG | + | chr1_3:66860813-66860832 | None:intergenic | 35.0% |
GACTGATTAAGACTTTGTGT+GGG | + | chr1_3:66860892-66860911 | None:intergenic | 35.0% | |
AGACTGATTAAGACTTTGTG+TGG | + | chr1_3:66860893-66860912 | None:intergenic | 35.0% | |
ATGCCAAAAAGGTGGATATA+GGG | + | chr1_3:66860923-66860942 | None:intergenic | 35.0% | |
ATACTTTCATGCCAAAAAGG+TGG | + | chr1_3:66860931-66860950 | None:intergenic | 35.0% | |
AAATGAAATCATGCCCAAAG+TGG | + | chr1_3:66860996-66861015 | None:intergenic | 35.0% | |
! | CTACAAACGATACACGATTT+TGG | - | chr1_3:66861194-66861213 | Msa0135240:intron | 35.0% |
TTTCAGCTTGATATCACTCT+TGG | - | chr1_3:66861381-66861400 | Msa0135240:intron | 35.0% | |
! | ATAAGGAACTTACTTGTTGG+TGG | + | chr1_3:66861436-66861455 | None:intergenic | 35.0% |
ATAAAAGTCTAACACAGGGT+CGG | - | chr1_3:66861591-66861610 | Msa0135240:CDS | 35.0% | |
!!! | TTTTGGTGCCCCTAAAATAA+AGG | - | chr1_3:66861837-66861856 | Msa0135240:intron | 35.0% |
GGCTAAAAATTCGAGAATTG+TGG | - | chr1_3:66861935-66861954 | Msa0135240:intron | 35.0% | |
AACAGAATCAAAGGTCATTG+GGG | - | chr1_3:66862234-66862253 | Msa0135240:intron | 35.0% | |
ACGTTCAATGAGACTATTTG+GGG | + | chr1_3:66862334-66862353 | None:intergenic | 35.0% | |
CACGTTCAATGAGACTATTT+GGG | + | chr1_3:66862335-66862354 | None:intergenic | 35.0% | |
! | TCTACTAACTCTAAGAACTC+AGG | + | chr1_3:66862417-66862436 | None:intergenic | 35.0% |
TGAGTTCTTAGAGTTAGTAG+AGG | - | chr1_3:66862416-66862435 | Msa0135240:intron | 35.0% | |
GCAACCATGAATTAAAACCT+TGG | + | chr1_3:66862585-66862604 | None:intergenic | 35.0% | |
CAGATATTTCAGCAATTCAC+TGG | - | chr1_3:66862832-66862851 | Msa0135240:intron | 35.0% | |
AACTGGAGCATAGAACATTA+TGG | + | chr1_3:66862866-66862885 | None:intergenic | 35.0% | |
ATGGTGATAGCAATTGTACT+AGG | - | chr1_3:66863048-66863067 | Msa0135240:intron | 35.0% | |
TGTACTAGGAATCAAAGTGA+AGG | - | chr1_3:66863062-66863081 | Msa0135240:intron | 35.0% | |
! | TTTTTGTGTCAGCATTTGCA+TGG | - | chr1_3:66863142-66863161 | Msa0135240:intron | 35.0% |
TCTAGTGGAAATATCTCACT+TGG | + | chr1_3:66863195-66863214 | None:intergenic | 35.0% | |
! | GGTATCTTCTTTTTCTTCTC+TGG | - | chr1_3:66863315-66863334 | Msa0135240:intron | 35.0% |
! | TCTTCTTTTTCTTCTCTGGT+TGG | - | chr1_3:66863319-66863338 | Msa0135240:intron | 35.0% |
TCTGTGTCATCTCTTCAATA+GGG | + | chr1_3:66863398-66863417 | None:intergenic | 35.0% | |
! | AGAAGTGTGAAGTTGAAGAT+GGG | - | chr1_3:66859478-66859497 | Msa0135240:CDS | 35.0% |
ACGTGATGAGTGTTTGAATT+TGG | - | chr1_3:66859530-66859549 | Msa0135240:CDS | 35.0% | |
CGTGATGAGTGTTTGAATTT+GGG | - | chr1_3:66859531-66859550 | Msa0135240:CDS | 35.0% | |
GTGATGAGTGTTTGAATTTG+GGG | - | chr1_3:66859532-66859551 | Msa0135240:CDS | 35.0% | |
!!! | GGATTGACTTGTGCATTTTA+AGG | - | chr1_3:66859842-66859861 | Msa0135240:CDS | 35.0% |
GGAAGATAAAGGACTAATAC+GGG | - | chr1_3:66859863-66859882 | Msa0135240:CDS | 35.0% | |
CGGGAAGAAGAAAAAGATAA+AGG | - | chr1_3:66859882-66859901 | Msa0135240:CDS | 35.0% | |
!!! | GCCGAACTTTTAAAACCTTT+TGG | - | chr1_3:66860795-66860814 | Msa0135240:intron | 35.0% |
! | ATTTGTTAGTTGCCACCAAA+AGG | + | chr1_3:66860813-66860832 | None:intergenic | 35.0% |
GACTGATTAAGACTTTGTGT+GGG | + | chr1_3:66860892-66860911 | None:intergenic | 35.0% | |
AGACTGATTAAGACTTTGTG+TGG | + | chr1_3:66860893-66860912 | None:intergenic | 35.0% | |
ATGCCAAAAAGGTGGATATA+GGG | + | chr1_3:66860923-66860942 | None:intergenic | 35.0% | |
ATACTTTCATGCCAAAAAGG+TGG | + | chr1_3:66860931-66860950 | None:intergenic | 35.0% | |
AAATGAAATCATGCCCAAAG+TGG | + | chr1_3:66860996-66861015 | None:intergenic | 35.0% | |
! | CTACAAACGATACACGATTT+TGG | - | chr1_3:66861194-66861213 | Msa0135240:intron | 35.0% |
TTTCAGCTTGATATCACTCT+TGG | - | chr1_3:66861381-66861400 | Msa0135240:intron | 35.0% | |
! | ATAAGGAACTTACTTGTTGG+TGG | + | chr1_3:66861436-66861455 | None:intergenic | 35.0% |
ATAAAAGTCTAACACAGGGT+CGG | - | chr1_3:66861591-66861610 | Msa0135240:CDS | 35.0% | |
!!! | TTTTGGTGCCCCTAAAATAA+AGG | - | chr1_3:66861837-66861856 | Msa0135240:intron | 35.0% |
GGCTAAAAATTCGAGAATTG+TGG | - | chr1_3:66861935-66861954 | Msa0135240:intron | 35.0% | |
AACAGAATCAAAGGTCATTG+GGG | - | chr1_3:66862234-66862253 | Msa0135240:intron | 35.0% | |
ACGTTCAATGAGACTATTTG+GGG | + | chr1_3:66862334-66862353 | None:intergenic | 35.0% | |
CACGTTCAATGAGACTATTT+GGG | + | chr1_3:66862335-66862354 | None:intergenic | 35.0% | |
! | TCTACTAACTCTAAGAACTC+AGG | + | chr1_3:66862417-66862436 | None:intergenic | 35.0% |
TGAGTTCTTAGAGTTAGTAG+AGG | - | chr1_3:66862416-66862435 | Msa0135240:intron | 35.0% | |
GCAACCATGAATTAAAACCT+TGG | + | chr1_3:66862585-66862604 | None:intergenic | 35.0% | |
CAGATATTTCAGCAATTCAC+TGG | - | chr1_3:66862832-66862851 | Msa0135240:intron | 35.0% | |
AACTGGAGCATAGAACATTA+TGG | + | chr1_3:66862866-66862885 | None:intergenic | 35.0% | |
ATGGTGATAGCAATTGTACT+AGG | - | chr1_3:66863048-66863067 | Msa0135240:intron | 35.0% | |
TGTACTAGGAATCAAAGTGA+AGG | - | chr1_3:66863062-66863081 | Msa0135240:intron | 35.0% | |
! | TTTTTGTGTCAGCATTTGCA+TGG | - | chr1_3:66863142-66863161 | Msa0135240:intron | 35.0% |
TCTAGTGGAAATATCTCACT+TGG | + | chr1_3:66863195-66863214 | None:intergenic | 35.0% | |
! | GGTATCTTCTTTTTCTTCTC+TGG | - | chr1_3:66863315-66863334 | Msa0135240:intron | 35.0% |
! | TCTTCTTTTTCTTCTCTGGT+TGG | - | chr1_3:66863319-66863338 | Msa0135240:intron | 35.0% |
TCTGTGTCATCTCTTCAATA+GGG | + | chr1_3:66863398-66863417 | None:intergenic | 35.0% | |
CATCTTCAACTTCACACTTC+TGG | + | chr1_3:66859479-66859498 | None:intergenic | 40.0% | |
! | CAGAAGTGTGAAGTTGAAGA+TGG | - | chr1_3:66859477-66859496 | Msa0135240:CDS | 40.0% |
TGAAGTTGAAGATGGGACAA+GGG | - | chr1_3:66859485-66859504 | Msa0135240:CDS | 40.0% | |
! | CAACCCTATATCCACCTTTT+TGG | - | chr1_3:66860917-66860936 | Msa0135240:intron | 40.0% |
CATGCCAAAAAGGTGGATAT+AGG | + | chr1_3:66860924-66860943 | None:intergenic | 40.0% | |
TTATGAGTCATGACACTTGC+TGG | - | chr1_3:66860967-66860986 | Msa0135240:intron | 40.0% | |
! | GCAATCTCTGAAAGGAAAAC+TGG | + | chr1_3:66861327-66861346 | None:intergenic | 40.0% |
! | TTGAAGGTGCAATCTCTGAA+AGG | + | chr1_3:66861335-66861354 | None:intergenic | 40.0% |
ATTGCACCTTCAAGAATACG+TGG | - | chr1_3:66861342-66861361 | Msa0135240:intron | 40.0% | |
AATGCTCCACGTATTCTTGA+AGG | + | chr1_3:66861351-66861370 | None:intergenic | 40.0% | |
!!! | TCCTAAGATTTTTGGTGTCC+TGG | - | chr1_3:66861614-66861633 | Msa0135240:CDS | 40.0% |
TCCAGGACACCAAAAATCTT+AGG | + | chr1_3:66861618-66861637 | None:intergenic | 40.0% | |
AGAGTTTCGTTGTTAGACCA+GGG | + | chr1_3:66861904-66861923 | None:intergenic | 40.0% | |
AAGAGTTTCGTTGTTAGACC+AGG | + | chr1_3:66861905-66861924 | None:intergenic | 40.0% | |
ACGAAACTCTTGCACACTAA+AGG | - | chr1_3:66861914-66861933 | Msa0135240:intron | 40.0% | |
CTAAAGTGAGGAGTAATGCT+GGG | + | chr1_3:66862290-66862309 | None:intergenic | 40.0% | |
CAGCATTACTCCTCACTTTA+GGG | - | chr1_3:66862289-66862308 | Msa0135240:intron | 40.0% | |
AGCATTACTCCTCACTTTAG+GGG | - | chr1_3:66862290-66862309 | Msa0135240:intron | 40.0% | |
TTTAGGGGCTTACTTAGTAG+TGG | - | chr1_3:66862305-66862324 | Msa0135240:intron | 40.0% | |
CCACGTTCAATGAGACTATT+TGG | + | chr1_3:66862336-66862355 | None:intergenic | 40.0% | |
CCAAATAGTCTCATTGAACG+TGG | - | chr1_3:66862333-66862352 | Msa0135240:intron | 40.0% | |
! | TGGAAATGACAAGTTGAGGT+CGG | + | chr1_3:66862500-66862519 | None:intergenic | 40.0% |
GCAATGGAAATGACAAGTTG+AGG | + | chr1_3:66862504-66862523 | None:intergenic | 40.0% | |
! | TGTCATTTCCATTGCCCTAA+TGG | - | chr1_3:66862509-66862528 | Msa0135240:intron | 40.0% |
AGTACAAACCATTAGGGCAA+TGG | + | chr1_3:66862520-66862539 | None:intergenic | 40.0% | |
TTTCGCTATTGCAATTAGGG+CGG | + | chr1_3:66862669-66862688 | None:intergenic | 40.0% | |
TCCAGTTCTGTTCAACACAT+TGG | - | chr1_3:66862879-66862898 | Msa0135240:intron | 40.0% | |
CCAGTTCTGTTCAACACATT+GGG | - | chr1_3:66862880-66862899 | Msa0135240:intron | 40.0% | |
CTTTACTCTGCTGTGATTAC+TGG | - | chr1_3:66862922-66862941 | Msa0135240:intron | 40.0% | |
! | ATTCTGAGGAACTCTCGAAA+GGG | - | chr1_3:66863088-66863107 | Msa0135240:intron | 40.0% |
TAGGGACATTCTTTGTCTCA+GGG | + | chr1_3:66863380-66863399 | None:intergenic | 40.0% | |
ATAGGGACATTCTTTGTCTC+AGG | + | chr1_3:66863381-66863400 | None:intergenic | 40.0% | |
CTCTGTGTCATCTCTTCAAT+AGG | + | chr1_3:66863399-66863418 | None:intergenic | 40.0% | |
! | GAAGATGAGAAAGTACATGG+TGG | - | chr1_3:66863471-66863490 | Msa0135240:CDS | 40.0% |
AGACAAGATCATTTCTGCCA+GGG | + | chr1_3:66863503-66863522 | None:intergenic | 40.0% | |
CATCTTCAACTTCACACTTC+TGG | + | chr1_3:66859479-66859498 | None:intergenic | 40.0% | |
! | CAGAAGTGTGAAGTTGAAGA+TGG | - | chr1_3:66859477-66859496 | Msa0135240:CDS | 40.0% |
TGAAGTTGAAGATGGGACAA+GGG | - | chr1_3:66859485-66859504 | Msa0135240:CDS | 40.0% | |
! | CAACCCTATATCCACCTTTT+TGG | - | chr1_3:66860917-66860936 | Msa0135240:intron | 40.0% |
CATGCCAAAAAGGTGGATAT+AGG | + | chr1_3:66860924-66860943 | None:intergenic | 40.0% | |
TTATGAGTCATGACACTTGC+TGG | - | chr1_3:66860967-66860986 | Msa0135240:intron | 40.0% | |
! | GCAATCTCTGAAAGGAAAAC+TGG | + | chr1_3:66861327-66861346 | None:intergenic | 40.0% |
! | TTGAAGGTGCAATCTCTGAA+AGG | + | chr1_3:66861335-66861354 | None:intergenic | 40.0% |
ATTGCACCTTCAAGAATACG+TGG | - | chr1_3:66861342-66861361 | Msa0135240:intron | 40.0% | |
AATGCTCCACGTATTCTTGA+AGG | + | chr1_3:66861351-66861370 | None:intergenic | 40.0% | |
!!! | TCCTAAGATTTTTGGTGTCC+TGG | - | chr1_3:66861614-66861633 | Msa0135240:CDS | 40.0% |
TCCAGGACACCAAAAATCTT+AGG | + | chr1_3:66861618-66861637 | None:intergenic | 40.0% | |
AGAGTTTCGTTGTTAGACCA+GGG | + | chr1_3:66861904-66861923 | None:intergenic | 40.0% | |
AAGAGTTTCGTTGTTAGACC+AGG | + | chr1_3:66861905-66861924 | None:intergenic | 40.0% | |
ACGAAACTCTTGCACACTAA+AGG | - | chr1_3:66861914-66861933 | Msa0135240:intron | 40.0% | |
CTAAAGTGAGGAGTAATGCT+GGG | + | chr1_3:66862290-66862309 | None:intergenic | 40.0% | |
CAGCATTACTCCTCACTTTA+GGG | - | chr1_3:66862289-66862308 | Msa0135240:intron | 40.0% | |
AGCATTACTCCTCACTTTAG+GGG | - | chr1_3:66862290-66862309 | Msa0135240:intron | 40.0% | |
TTTAGGGGCTTACTTAGTAG+TGG | - | chr1_3:66862305-66862324 | Msa0135240:intron | 40.0% | |
CCACGTTCAATGAGACTATT+TGG | + | chr1_3:66862336-66862355 | None:intergenic | 40.0% | |
CCAAATAGTCTCATTGAACG+TGG | - | chr1_3:66862333-66862352 | Msa0135240:intron | 40.0% | |
! | TGGAAATGACAAGTTGAGGT+CGG | + | chr1_3:66862500-66862519 | None:intergenic | 40.0% |
GCAATGGAAATGACAAGTTG+AGG | + | chr1_3:66862504-66862523 | None:intergenic | 40.0% | |
! | TGTCATTTCCATTGCCCTAA+TGG | - | chr1_3:66862509-66862528 | Msa0135240:intron | 40.0% |
AGTACAAACCATTAGGGCAA+TGG | + | chr1_3:66862520-66862539 | None:intergenic | 40.0% | |
TTTCGCTATTGCAATTAGGG+CGG | + | chr1_3:66862669-66862688 | None:intergenic | 40.0% | |
TCCAGTTCTGTTCAACACAT+TGG | - | chr1_3:66862879-66862898 | Msa0135240:intron | 40.0% | |
CCAGTTCTGTTCAACACATT+GGG | - | chr1_3:66862880-66862899 | Msa0135240:intron | 40.0% | |
CTTTACTCTGCTGTGATTAC+TGG | - | chr1_3:66862922-66862941 | Msa0135240:intron | 40.0% | |
! | ATTCTGAGGAACTCTCGAAA+GGG | - | chr1_3:66863088-66863107 | Msa0135240:intron | 40.0% |
TAGGGACATTCTTTGTCTCA+GGG | + | chr1_3:66863380-66863399 | None:intergenic | 40.0% | |
ATAGGGACATTCTTTGTCTC+AGG | + | chr1_3:66863381-66863400 | None:intergenic | 40.0% | |
CTCTGTGTCATCTCTTCAAT+AGG | + | chr1_3:66863399-66863418 | None:intergenic | 40.0% | |
! | GAAGATGAGAAAGTACATGG+TGG | - | chr1_3:66863471-66863490 | Msa0135240:CDS | 40.0% |
AGACAAGATCATTTCTGCCA+GGG | + | chr1_3:66863503-66863522 | None:intergenic | 40.0% | |
GTGAAGTTGAAGATGGGACA+AGG | - | chr1_3:66859484-66859503 | Msa0135240:CDS | 45.0% | |
TGAAGATGGGACAAGGGAAA+TGG | - | chr1_3:66859491-66859510 | Msa0135240:CDS | 45.0% | |
GAAGATGGGACAAGGGAAAT+GGG | - | chr1_3:66859492-66859511 | Msa0135240:CDS | 45.0% | |
AGAACCACGCGTTCACTAAA+AGG | + | chr1_3:66860587-66860606 | None:intergenic | 45.0% | |
! | CTCTGAAAGGAAAACTGGCA+CGG | + | chr1_3:66861322-66861341 | None:intergenic | 45.0% |
!! | TGTTGGTGGCATAGTTGACA+AGG | + | chr1_3:66861422-66861441 | None:intergenic | 45.0% |
! | AGGGTCGGTCCTAAGATTTT+TGG | - | chr1_3:66861606-66861625 | Msa0135240:CDS | 45.0% |
!!! | CCAGGGCACCTTTATTTTAG+GGG | + | chr1_3:66861848-66861867 | None:intergenic | 45.0% |
!!! | CCCAGGGCACCTTTATTTTA+GGG | + | chr1_3:66861849-66861868 | None:intergenic | 45.0% |
!! | CCCTAAAATAAAGGTGCCCT+GGG | - | chr1_3:66861846-66861865 | Msa0135240:intron | 45.0% |
GAGTTTCGTTGTTAGACCAG+GGG | + | chr1_3:66861903-66861922 | None:intergenic | 45.0% | |
GAATCAAAGGTCATTGGGGT+TGG | - | chr1_3:66862238-66862257 | Msa0135240:intron | 45.0% | |
!! | TTGGAGGATATCTCTGGGAT+TGG | - | chr1_3:66862257-66862276 | Msa0135240:intron | 45.0% |
!! | TGGAGGATATCTCTGGGATT+GGG | - | chr1_3:66862258-66862277 | Msa0135240:intron | 45.0% |
CCTAAAGTGAGGAGTAATGC+TGG | + | chr1_3:66862291-66862310 | None:intergenic | 45.0% | |
CCAGCATTACTCCTCACTTT+AGG | - | chr1_3:66862288-66862307 | Msa0135240:intron | 45.0% | |
CTAAGTAAGCCCCTAAAGTG+AGG | + | chr1_3:66862302-66862321 | None:intergenic | 45.0% | |
TCTCATTGAACGTGGTCACT+TGG | - | chr1_3:66862341-66862360 | Msa0135240:intron | 45.0% | |
!! | GCTGTTCTGAGAAAGATTCG+TGG | - | chr1_3:66862375-66862394 | Msa0135240:intron | 45.0% |
TCTGAGAAAGATTCGTGGCA+CGG | - | chr1_3:66862380-66862399 | Msa0135240:intron | 45.0% | |
CGCTTGAGGAGATTTCTGAA+CGG | + | chr1_3:66862471-66862490 | None:intergenic | 45.0% | |
AGGGTCTGCAATTGCAATTG+TGG | + | chr1_3:66862714-66862733 | None:intergenic | 45.0% | |
CCCAATGTGTTGAACAGAAC+TGG | + | chr1_3:66862883-66862902 | None:intergenic | 45.0% | |
CGAAAGCTATTACTCGAAGC+TGG | - | chr1_3:66863003-66863022 | Msa0135240:intron | 45.0% | |
CAAAGTGAAGGACCATTCTG+AGG | - | chr1_3:66863074-66863093 | Msa0135240:intron | 45.0% | |
CTTTCGAGAGTTCCTCAGAA+TGG | + | chr1_3:66863089-66863108 | None:intergenic | 45.0% | |
! | CATTCTGAGGAACTCTCGAA+AGG | - | chr1_3:66863087-66863106 | Msa0135240:intron | 45.0% |
TGCAGCTCTTGTAGTTGTGA+TGG | - | chr1_3:66863113-66863132 | Msa0135240:intron | 45.0% | |
TGTCAGCATTTGCATGGTCA+TGG | - | chr1_3:66863148-66863167 | Msa0135240:intron | 45.0% | |
GTCAGCATTTGCATGGTCAT+GGG | - | chr1_3:66863149-66863168 | Msa0135240:intron | 45.0% | |
TCAGCATTTGCATGGTCATG+GGG | - | chr1_3:66863150-66863169 | Msa0135240:intron | 45.0% | |
CTTGGAATAAGCCAAGCAAG+TGG | + | chr1_3:66863177-66863196 | None:intergenic | 45.0% | |
CATTCTTTGTCTCAGGGACA+AGG | + | chr1_3:66863374-66863393 | None:intergenic | 45.0% | |
AAGAGATGACACAGAGAGTG+TGG | - | chr1_3:66863403-66863422 | Msa0135240:intron | 45.0% | |
!!! | TGTGGAAGCAGCATTGGTTT+TGG | - | chr1_3:66863421-66863440 | Msa0135240:CDS | 45.0% |
!!! | AGCAGCATTGGTTTTGGAAG+AGG | - | chr1_3:66863427-66863446 | Msa0135240:CDS | 45.0% |
GACAAGATCATTTCTGCCAG+GGG | + | chr1_3:66863502-66863521 | None:intergenic | 45.0% | |
GAGACAAGATCATTTCTGCC+AGG | + | chr1_3:66863504-66863523 | None:intergenic | 45.0% | |
GTGAAGTTGAAGATGGGACA+AGG | - | chr1_3:66859484-66859503 | Msa0135240:CDS | 45.0% | |
TGAAGATGGGACAAGGGAAA+TGG | - | chr1_3:66859491-66859510 | Msa0135240:CDS | 45.0% | |
GAAGATGGGACAAGGGAAAT+GGG | - | chr1_3:66859492-66859511 | Msa0135240:CDS | 45.0% | |
AGAACCACGCGTTCACTAAA+AGG | + | chr1_3:66860587-66860606 | None:intergenic | 45.0% | |
! | CTCTGAAAGGAAAACTGGCA+CGG | + | chr1_3:66861322-66861341 | None:intergenic | 45.0% |
!! | TGTTGGTGGCATAGTTGACA+AGG | + | chr1_3:66861422-66861441 | None:intergenic | 45.0% |
! | AGGGTCGGTCCTAAGATTTT+TGG | - | chr1_3:66861606-66861625 | Msa0135240:CDS | 45.0% |
!!! | CCAGGGCACCTTTATTTTAG+GGG | + | chr1_3:66861848-66861867 | None:intergenic | 45.0% |
!!! | CCCAGGGCACCTTTATTTTA+GGG | + | chr1_3:66861849-66861868 | None:intergenic | 45.0% |
!! | CCCTAAAATAAAGGTGCCCT+GGG | - | chr1_3:66861846-66861865 | Msa0135240:intron | 45.0% |
GAGTTTCGTTGTTAGACCAG+GGG | + | chr1_3:66861903-66861922 | None:intergenic | 45.0% | |
GAATCAAAGGTCATTGGGGT+TGG | - | chr1_3:66862238-66862257 | Msa0135240:intron | 45.0% | |
!! | TTGGAGGATATCTCTGGGAT+TGG | - | chr1_3:66862257-66862276 | Msa0135240:intron | 45.0% |
!! | TGGAGGATATCTCTGGGATT+GGG | - | chr1_3:66862258-66862277 | Msa0135240:intron | 45.0% |
CCTAAAGTGAGGAGTAATGC+TGG | + | chr1_3:66862291-66862310 | None:intergenic | 45.0% | |
CCAGCATTACTCCTCACTTT+AGG | - | chr1_3:66862288-66862307 | Msa0135240:intron | 45.0% | |
CTAAGTAAGCCCCTAAAGTG+AGG | + | chr1_3:66862302-66862321 | None:intergenic | 45.0% | |
TCTCATTGAACGTGGTCACT+TGG | - | chr1_3:66862341-66862360 | Msa0135240:intron | 45.0% | |
!! | GCTGTTCTGAGAAAGATTCG+TGG | - | chr1_3:66862375-66862394 | Msa0135240:intron | 45.0% |
TCTGAGAAAGATTCGTGGCA+CGG | - | chr1_3:66862380-66862399 | Msa0135240:intron | 45.0% | |
CGCTTGAGGAGATTTCTGAA+CGG | + | chr1_3:66862471-66862490 | None:intergenic | 45.0% | |
AGGGTCTGCAATTGCAATTG+TGG | + | chr1_3:66862714-66862733 | None:intergenic | 45.0% | |
CCCAATGTGTTGAACAGAAC+TGG | + | chr1_3:66862883-66862902 | None:intergenic | 45.0% | |
CGAAAGCTATTACTCGAAGC+TGG | - | chr1_3:66863003-66863022 | Msa0135240:intron | 45.0% | |
CAAAGTGAAGGACCATTCTG+AGG | - | chr1_3:66863074-66863093 | Msa0135240:intron | 45.0% | |
CTTTCGAGAGTTCCTCAGAA+TGG | + | chr1_3:66863089-66863108 | None:intergenic | 45.0% | |
! | CATTCTGAGGAACTCTCGAA+AGG | - | chr1_3:66863087-66863106 | Msa0135240:intron | 45.0% |
TGCAGCTCTTGTAGTTGTGA+TGG | - | chr1_3:66863113-66863132 | Msa0135240:intron | 45.0% | |
TGTCAGCATTTGCATGGTCA+TGG | - | chr1_3:66863148-66863167 | Msa0135240:intron | 45.0% | |
GTCAGCATTTGCATGGTCAT+GGG | - | chr1_3:66863149-66863168 | Msa0135240:intron | 45.0% | |
TCAGCATTTGCATGGTCATG+GGG | - | chr1_3:66863150-66863169 | Msa0135240:intron | 45.0% | |
CTTGGAATAAGCCAAGCAAG+TGG | + | chr1_3:66863177-66863196 | None:intergenic | 45.0% | |
CATTCTTTGTCTCAGGGACA+AGG | + | chr1_3:66863374-66863393 | None:intergenic | 45.0% | |
AAGAGATGACACAGAGAGTG+TGG | - | chr1_3:66863403-66863422 | Msa0135240:intron | 45.0% | |
!!! | TGTGGAAGCAGCATTGGTTT+TGG | - | chr1_3:66863421-66863440 | Msa0135240:CDS | 45.0% |
!!! | AGCAGCATTGGTTTTGGAAG+AGG | - | chr1_3:66863427-66863446 | Msa0135240:CDS | 45.0% |
GACAAGATCATTTCTGCCAG+GGG | + | chr1_3:66863502-66863521 | None:intergenic | 45.0% | |
GAGACAAGATCATTTCTGCC+AGG | + | chr1_3:66863504-66863523 | None:intergenic | 45.0% | |
!!! | TTTTGTTATTATTATTTTTT+AGG | + | chr1_3:66859956-66859975 | None:intergenic | 5.0% |
!! | TTGTAAAAATAAATAAATAA+AGG | - | chr1_3:66860856-66860875 | Msa0135240:intron | 5.0% |
!!! | CATTTATTTTATATTTTTAT+AGG | - | chr1_3:66862016-66862035 | Msa0135240:intron | 5.0% |
!!! | TTTTGTTATTATTATTTTTT+AGG | + | chr1_3:66859956-66859975 | None:intergenic | 5.0% |
!! | TTGTAAAAATAAATAAATAA+AGG | - | chr1_3:66860856-66860875 | Msa0135240:intron | 5.0% |
!!! | CATTTATTTTATATTTTTAT+AGG | - | chr1_3:66862016-66862035 | Msa0135240:intron | 5.0% |
AAGGGAAATGGGTGTGACTC+AGG | - | chr1_3:66859503-66859522 | Msa0135240:CDS | 50.0% | |
! | CTCACCTTTTAGTGAACGCG+TGG | - | chr1_3:66860580-66860599 | Msa0135240:CDS | 50.0% |
! | ACACTTGCTGGTGACCACTT+TGG | - | chr1_3:66860979-66860998 | Msa0135240:intron | 50.0% |
! | CACTTGCTGGTGACCACTTT+GGG | - | chr1_3:66860980-66860999 | Msa0135240:intron | 50.0% |
!! | CCCCTAAAATAAAGGTGCCC+TGG | - | chr1_3:66861845-66861864 | Msa0135240:intron | 50.0% |
!!! | GCCCAGGGCACCTTTATTTT+AGG | + | chr1_3:66861850-66861869 | None:intergenic | 50.0% |
TTTCGTTGTTAGACCAGGGG+TGG | + | chr1_3:66861900-66861919 | None:intergenic | 50.0% | |
TCAAAGGTCATTGGGGTTGG+AGG | - | chr1_3:66862241-66862260 | Msa0135240:intron | 50.0% | |
TTGGGGTTGGAGGATATCTC+TGG | - | chr1_3:66862251-66862270 | Msa0135240:intron | 50.0% | |
TGGGGTTGGAGGATATCTCT+GGG | - | chr1_3:66862252-66862271 | Msa0135240:intron | 50.0% | |
!! | AGGATATCTCTGGGATTGGG+AGG | - | chr1_3:66862261-66862280 | Msa0135240:intron | 50.0% |
GAACGTGGTCACTTGGACAA+AGG | - | chr1_3:66862348-66862367 | Msa0135240:intron | 50.0% | |
! | GGCAAGTCGTGTTGCTAAAG+AGG | - | chr1_3:66862437-66862456 | Msa0135240:intron | 50.0% |
CACTAGAGACTCGTTCTGCA+GGG | - | chr1_3:66863208-66863227 | Msa0135240:intron | 50.0% | |
GTGCAATGACAGCAGTGAAG+AGG | + | chr1_3:66863260-66863279 | None:intergenic | 50.0% | |
! | AGAGAGTGTGGAAGCAGCAT+TGG | - | chr1_3:66863415-66863434 | Msa0135240:intron | 50.0% |
! | GTACATGGTGGAAATTCCCC+TGG | - | chr1_3:66863483-66863502 | Msa0135240:CDS | 50.0% |
AAGGGAAATGGGTGTGACTC+AGG | - | chr1_3:66859503-66859522 | Msa0135240:CDS | 50.0% | |
! | CTCACCTTTTAGTGAACGCG+TGG | - | chr1_3:66860580-66860599 | Msa0135240:CDS | 50.0% |
! | ACACTTGCTGGTGACCACTT+TGG | - | chr1_3:66860979-66860998 | Msa0135240:intron | 50.0% |
! | CACTTGCTGGTGACCACTTT+GGG | - | chr1_3:66860980-66860999 | Msa0135240:intron | 50.0% |
!! | CCCCTAAAATAAAGGTGCCC+TGG | - | chr1_3:66861845-66861864 | Msa0135240:intron | 50.0% |
!!! | GCCCAGGGCACCTTTATTTT+AGG | + | chr1_3:66861850-66861869 | None:intergenic | 50.0% |
TTTCGTTGTTAGACCAGGGG+TGG | + | chr1_3:66861900-66861919 | None:intergenic | 50.0% | |
TCAAAGGTCATTGGGGTTGG+AGG | - | chr1_3:66862241-66862260 | Msa0135240:intron | 50.0% | |
TTGGGGTTGGAGGATATCTC+TGG | - | chr1_3:66862251-66862270 | Msa0135240:intron | 50.0% | |
TGGGGTTGGAGGATATCTCT+GGG | - | chr1_3:66862252-66862271 | Msa0135240:intron | 50.0% | |
!! | AGGATATCTCTGGGATTGGG+AGG | - | chr1_3:66862261-66862280 | Msa0135240:intron | 50.0% |
GAACGTGGTCACTTGGACAA+AGG | - | chr1_3:66862348-66862367 | Msa0135240:intron | 50.0% | |
! | GGCAAGTCGTGTTGCTAAAG+AGG | - | chr1_3:66862437-66862456 | Msa0135240:intron | 50.0% |
CACTAGAGACTCGTTCTGCA+GGG | - | chr1_3:66863208-66863227 | Msa0135240:intron | 50.0% | |
GTGCAATGACAGCAGTGAAG+AGG | + | chr1_3:66863260-66863279 | None:intergenic | 50.0% | |
! | AGAGAGTGTGGAAGCAGCAT+TGG | - | chr1_3:66863415-66863434 | Msa0135240:intron | 50.0% |
! | GTACATGGTGGAAATTCCCC+TGG | - | chr1_3:66863483-66863502 | Msa0135240:CDS | 50.0% |
! | TTCACACTTCTGGCTGCGTG+TGG | + | chr1_3:66859469-66859488 | None:intergenic | 55.0% |
GAGGTCGGTTATTGCGCTTG+AGG | + | chr1_3:66862485-66862504 | None:intergenic | 55.0% | |
CCTGCAGAACGAGTCTCTAG+TGG | + | chr1_3:66863210-66863229 | None:intergenic | 55.0% | |
CCACTAGAGACTCGTTCTGC+AGG | - | chr1_3:66863207-66863226 | Msa0135240:intron | 55.0% | |
! | TTCACACTTCTGGCTGCGTG+TGG | + | chr1_3:66859469-66859488 | None:intergenic | 55.0% |
GAGGTCGGTTATTGCGCTTG+AGG | + | chr1_3:66862485-66862504 | None:intergenic | 55.0% | |
CCTGCAGAACGAGTCTCTAG+TGG | + | chr1_3:66863210-66863229 | None:intergenic | 55.0% | |
CCACTAGAGACTCGTTCTGC+AGG | - | chr1_3:66863207-66863226 | Msa0135240:intron | 55.0% | |
GGTCATGGGGTCCACTTGCT+TGG | - | chr1_3:66863163-66863182 | Msa0135240:intron | 60.0% | |
GGTCATGGGGTCCACTTGCT+TGG | - | chr1_3:66863163-66863182 | Msa0135240:intron | 60.0% | |
TAGACCAGGGGTGGCCCTGA+GGG | + | chr1_3:66861891-66861910 | None:intergenic | 65.0% | |
TTAGACCAGGGGTGGCCCTG+AGG | + | chr1_3:66861892-66861911 | None:intergenic | 65.0% | |
TAGACCAGGGGTGGCCCTGA+GGG | + | chr1_3:66861891-66861910 | None:intergenic | 65.0% | |
TTAGACCAGGGGTGGCCCTG+AGG | + | chr1_3:66861892-66861911 | None:intergenic | 65.0% | |
CTGAGGGTGGACGGAAGGGG+CGG | + | chr1_3:66861875-66861894 | None:intergenic | 70.0% | |
GCCCCTTCCGTCCACCCTCA+GGG | - | chr1_3:66861874-66861893 | Msa0135240:intron | 70.0% | |
GCCCTGAGGGTGGACGGAAG+GGG | + | chr1_3:66861878-66861897 | None:intergenic | 70.0% | |
GGCCCTGAGGGTGGACGGAA+GGG | + | chr1_3:66861879-66861898 | None:intergenic | 70.0% | |
TGGCCCTGAGGGTGGACGGA+AGG | + | chr1_3:66861880-66861899 | None:intergenic | 70.0% | |
CTGAGGGTGGACGGAAGGGG+CGG | + | chr1_3:66861875-66861894 | None:intergenic | 70.0% | |
GCCCCTTCCGTCCACCCTCA+GGG | - | chr1_3:66861874-66861893 | Msa0135240:intron | 70.0% | |
GCCCTGAGGGTGGACGGAAG+GGG | + | chr1_3:66861878-66861897 | None:intergenic | 70.0% | |
GGCCCTGAGGGTGGACGGAA+GGG | + | chr1_3:66861879-66861898 | None:intergenic | 70.0% | |
TGGCCCTGAGGGTGGACGGA+AGG | + | chr1_3:66861880-66861899 | None:intergenic | 70.0% | |
ACGGAAGGGGCGGCAGCCCA+GGG | + | chr1_3:66861865-66861884 | None:intergenic | 75.0% | |
CGCCCCTTCCGTCCACCCTC+AGG | - | chr1_3:66861873-66861892 | Msa0135240:intron | 75.0% | |
GGGGTGGCCCTGAGGGTGGA+CGG | + | chr1_3:66861884-66861903 | None:intergenic | 75.0% | |
TCCACCCTCAGGGCCACCCC+TGG | - | chr1_3:66861884-66861903 | Msa0135240:intron | 75.0% | |
ACCAGGGGTGGCCCTGAGGG+TGG | + | chr1_3:66861888-66861907 | None:intergenic | 75.0% | |
ACGGAAGGGGCGGCAGCCCA+GGG | + | chr1_3:66861865-66861884 | None:intergenic | 75.0% | |
CGCCCCTTCCGTCCACCCTC+AGG | - | chr1_3:66861873-66861892 | Msa0135240:intron | 75.0% | |
GGGGTGGCCCTGAGGGTGGA+CGG | + | chr1_3:66861884-66861903 | None:intergenic | 75.0% | |
TCCACCCTCAGGGCCACCCC+TGG | - | chr1_3:66861884-66861903 | Msa0135240:intron | 75.0% | |
ACCAGGGGTGGCCCTGAGGG+TGG | + | chr1_3:66861888-66861907 | None:intergenic | 75.0% | |
! | GACGGAAGGGGCGGCAGCCC+AGG | + | chr1_3:66861866-66861885 | None:intergenic | 80.0% |
! | GACGGAAGGGGCGGCAGCCC+AGG | + | chr1_3:66861866-66861885 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 66859447 | 66863533 | 66859447 | ID=Msa0135240;Name=Msa0135240 |
chr1_3 | mRNA | 66859447 | 66863533 | 66859447 | ID=Msa0135240-mRNA-1;Parent=Msa0135240;Name=Msa0135240-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.75|1|1|4|0|410 |
chr1_3 | exon | 66863417 | 66863533 | 66863417 | ID=Msa0135240-mRNA-1:exon:22876;Parent=Msa0135240-mRNA-1 |
chr1_3 | exon | 66861538 | 66861662 | 66861538 | ID=Msa0135240-mRNA-1:exon:22875;Parent=Msa0135240-mRNA-1 |
chr1_3 | exon | 66860450 | 66860741 | 66860450 | ID=Msa0135240-mRNA-1:exon:22874;Parent=Msa0135240-mRNA-1 |
chr1_3 | exon | 66859447 | 66860145 | 66859447 | ID=Msa0135240-mRNA-1:exon:22873;Parent=Msa0135240-mRNA-1 |
chr1_3 | CDS | 66863417 | 66863533 | 66863417 | ID=Msa0135240-mRNA-1:cds;Parent=Msa0135240-mRNA-1 |
chr1_3 | CDS | 66861538 | 66861662 | 66861538 | ID=Msa0135240-mRNA-1:cds;Parent=Msa0135240-mRNA-1 |
chr1_3 | CDS | 66860450 | 66860741 | 66860450 | ID=Msa0135240-mRNA-1:cds;Parent=Msa0135240-mRNA-1 |
chr1_3 | CDS | 66859447 | 66860145 | 66859447 | ID=Msa0135240-mRNA-1:cds;Parent=Msa0135240-mRNA-1 |
Gene Sequence |
Protein sequence |