AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044450 MtrunA17_Chr1g0205691 98.662 523 7 0 1 523 1 523 0.0 1050
Msa0044450 MtrunA17_Chr5g0394341 83.008 512 83 2 13 523 13 521 0.0 872
Msa0044450 MtrunA17_Chr1g0205681 69.200 500 153 1 1 499 1 500 0.0 721
Msa0044450 MtrunA17_Chr1g0205671 68.400 500 156 2 1 499 1 499 0.0 714
Msa0044450 MtrunA17_Chr3g0078971 56.400 500 211 6 10 507 11 505 0.0 592
Msa0044450 MtrunA17_Chr5g0445601 58.000 500 200 6 1 495 1 495 0.0 585
Msa0044450 MtrunA17_Chr4g0065311 56.173 486 208 4 13 498 12 492 0.0 584
Msa0044450 MtrunA17_Chr7g0257631 57.400 500 203 6 1 495 35 529 0.0 577
Msa0044450 MtrunA17_Chr5g0437021 55.912 499 216 3 7 504 8 503 0.0 575
Msa0044450 MtrunA17_Chr4g0065324 52.684 503 232 5 2 503 8 505 0.0 563
Msa0044450 MtrunA17_Chr4g0048411 58.045 491 202 3 11 499 12 500 0.0 555
Msa0044450 MtrunA17_Chr1g0164871 53.877 503 223 4 12 513 13 507 0.0 552
Msa0044450 MtrunA17_Chr1g0164851 54.713 488 217 3 12 498 13 497 0.0 548
Msa0044450 MtrunA17_Chr3g0078991 52.579 504 230 7 10 510 11 508 0.0 548
Msa0044450 MtrunA17_Chr8g0390261 54.938 486 214 5 14 498 18 499 0.0 540
Msa0044450 MtrunA17_Chr8g0390141 53.644 494 224 5 14 506 18 507 0.0 538
Msa0044450 MtrunA17_Chr6g0486681 53.360 506 227 6 1 501 1 502 0.0 536
Msa0044450 MtrunA17_Chr6g0486671 53.360 506 227 6 1 501 1 502 0.0 536
Msa0044450 MtrunA17_Chr5g0417611 52.047 513 242 3 1 510 1 512 0.0 533
Msa0044450 MtrunA17_Chr3g0128081 51.845 515 243 3 1 513 1 512 0.0 529
Msa0044450 MtrunA17_Chr5g0420841 52.104 499 233 3 13 509 12 506 0.0 529
Msa0044450 MtrunA17_Chr4g0048051 54.217 498 222 4 7 501 8 502 1.32e-180 517
Msa0044450 MtrunA17_Chr3g0085971 50.713 491 239 2 13 501 12 501 8.24e-177 507
Msa0044450 MtrunA17_Chr3g0115711 47.628 506 257 6 1 503 1 501 7.00e-175 502
Msa0044450 MtrunA17_Chr3g0115741 49.174 484 236 7 22 501 26 503 3.11e-174 501
Msa0044450 MtrunA17_Chr3g0115781 47.801 523 250 11 1 514 1 509 1.34e-173 499
Msa0044450 MtrunA17_Chr3g0115751 48.361 488 244 6 22 506 28 510 3.00e-173 498
Msa0044450 MtrunA17_Chr3g0115721 47.162 511 259 8 1 506 1 505 5.93e-173 498
Msa0044450 MtrunA17_Chr3g0128171 53.982 452 204 3 49 497 1 451 2.76e-163 471
Msa0044450 MtrunA17_Chr3g0078791 50.000 444 194 4 70 511 15 432 1.47e-150 437
Msa0044450 MtrunA17_Chr3g0115731 43.385 514 245 12 1 502 1 480 7.20e-148 433
Msa0044450 MtrunA17_Chr4g0065351 53.666 341 155 3 161 501 1 338 7.91e-135 395
Msa0044450 MtrunA17_Chr6g0485661 30.886 463 281 10 27 476 63 499 4.64e-58 201
Msa0044450 MtrunA17_Chr7g0214451 29.980 507 311 13 11 505 22 496 3.58e-57 198
Msa0044450 MtrunA17_Chr4g0034681 29.183 514 313 12 25 513 32 519 6.09e-56 195
Msa0044450 MtrunA17_Chr3g0144361 28.953 487 286 9 26 483 32 487 1.30e-55 194
Msa0044450 MtrunA17_Chr3g0115771 34.810 316 158 7 151 463 5 275 1.83e-55 187
Msa0044450 MtrunA17_Chr1g0213611 28.937 508 328 9 5 499 57 544 3.16e-55 194
Msa0044450 MtrunA17_Chr4g0036021 28.106 491 305 9 26 496 31 493 2.71e-54 191
Msa0044450 MtrunA17_Chr8g0390521 28.310 491 312 10 7 483 3 467 6.32e-53 187
Msa0044450 MtrunA17_Chr4g0021771 27.071 495 320 10 23 505 55 520 7.52e-53 187
Msa0044450 MtrunA17_Chr4g0032021 30.178 507 306 12 6 489 75 556 1.70e-51 184
Msa0044450 MtrunA17_Chr2g0282031 27.966 472 301 10 23 483 53 496 2.22e-50 180
Msa0044450 MtrunA17_Chr4g0039651 28.600 493 305 11 10 486 38 499 4.40e-50 179
Msa0044450 MtrunA17_Chr1g0213631 31.202 391 254 9 108 491 53 435 4.64e-50 178
Msa0044450 MtrunA17_Chr8g0373531 29.530 447 286 7 83 505 59 500 5.62e-50 179
Msa0044450 MtrunA17_Chr5g0432581 29.452 438 280 7 89 502 65 497 5.74e-50 179
Msa0044450 MtrunA17_Chr7g0273281 27.366 486 307 8 10 483 40 491 3.86e-47 171
Msa0044450 MtrunA17_Chr6g0457781 28.903 474 293 11 18 485 105 540 1.47e-45 167
Msa0044450 MtrunA17_Chr2g0303731 32.345 371 221 8 20 382 24 372 3.07e-45 167
Msa0044450 MtrunA17_Chr8g0376631 32.749 342 199 6 20 352 24 343 2.19e-44 165
Msa0044450 MtrunA17_Chr4g0065341 50.658 152 71 2 3 152 6 155 2.99e-44 154
Msa0044450 MtrunA17_Chr7g0250881 29.325 474 291 12 18 485 65 500 4.98e-44 162
Msa0044450 MtrunA17_Chr8g0373181 28.326 466 299 9 22 483 47 481 1.43e-43 161
Msa0044450 MtrunA17_Chr8g0376611 37.008 254 147 5 108 352 27 276 1.70e-42 158
Msa0044450 MtrunA17_Chr2g0303701 31.563 339 204 7 20 352 24 340 3.80e-42 158
Msa0044450 MtrunA17_Chr8g0376601 31.214 346 207 7 16 352 20 343 3.83e-42 158
Msa0044450 MtrunA17_Chr1g0155221 30.829 386 248 7 107 485 113 486 8.02e-42 156
Msa0044450 MtrunA17_Chr8g0373191 30.878 353 230 5 135 483 111 453 9.50e-41 152
Msa0044450 MtrunA17_Chr2g0290181 28.715 397 247 9 1 382 1 376 1.17e-39 152
Msa0044450 MtrunA17_Chr4g0066581 27.557 479 306 9 10 483 40 482 2.58e-39 149
Msa0044450 MtrunA17_Chr2g0286721 26.987 478 312 9 9 483 36 479 5.62e-39 148
Msa0044450 MtrunA17_Chr5g0446681 44.022 184 66 2 1 184 1 147 1.50e-38 142
Msa0044450 MtrunA17_Chr5g0446681 49.315 146 68 2 367 512 149 288 1.53e-34 131
Msa0044450 MtrunA17_Chr5g0403831 27.166 427 289 7 78 483 66 491 9.37e-38 145
Msa0044450 MtrunA17_Chr7g0259471 26.044 407 286 5 83 487 80 473 2.70e-37 143
Msa0044450 MtrunA17_Chr3g0119401 27.494 411 270 12 88 487 139 532 3.63e-37 144
Msa0044450 MtrunA17_Chr7g0259221 26.781 407 283 5 83 487 82 475 6.04e-37 142
Msa0044450 MtrunA17_Chr4g0004821 24.722 449 321 8 46 491 42 476 2.80e-35 137
Msa0044450 MtrunA17_Chr6g0486021 26.409 337 235 5 98 433 107 431 2.69e-32 129
Msa0044450 MtrunA17_Chr3g0121674 27.213 305 213 6 205 504 2 302 3.34e-31 122
Msa0044450 MtrunA17_Chr2g0290161 29.010 293 169 8 99 381 19 282 2.76e-29 120
Msa0044450 MtrunA17_Chr7g0228781 38.983 177 73 3 11 152 27 203 7.52e-29 113
Msa0044450 MtrunA17_Chr3g0115761 46.218 119 60 2 49 166 1 116 3.62e-26 103
Msa0044450 MtrunA17_Chr7g0273261 29.956 227 149 4 257 483 17 233 8.97e-21 92.0
Msa0044450 MtrunA17_Chr5g0434231 28.652 178 101 2 81 258 3 154 9.11e-19 83.6
Msa0044450 MtrunA17_Chr3g0144261 33.523 176 114 3 88 261 48 222 1.60e-18 89.4
Msa0044450 MtrunA17_Chr3g0144261 27.888 251 151 10 257 485 473 715 2.63e-14 75.9
Msa0044450 MtrunA17_Chr5g0407441 24.896 241 158 5 22 260 4 223 9.97e-17 83.6
Msa0044450 MtrunA17_Chr5g0407441 27.273 264 161 7 235 481 454 703 6.19e-12 68.2
Msa0044450 MtrunA17_Chr3g0146061 30.978 184 124 3 88 269 50 232 1.02e-16 83.6
Msa0044450 MtrunA17_Chr3g0146061 23.887 247 158 7 257 481 483 721 1.84e-11 67.0
Msa0044450 MtrunA17_Chr8g0370141 26.908 249 157 7 22 267 4 230 4.52e-16 80.1
Msa0044450 MtrunA17_Chr5g0419321 25.281 178 131 2 84 260 75 251 2.62e-15 79.0
Msa0044450 MtrunA17_Chr5g0419321 27.897 233 149 5 264 485 509 733 1.05e-11 67.8
Msa0044450 MtrunA17_Chr8g0370151 27.953 254 154 6 241 481 105 342 6.05e-15 76.3
Msa0044450 MtrunA17_Chr6g0450271 37.398 123 66 4 239 352 32 152 1.44e-14 73.6
Msa0044450 MtrunA17_Chr5g0404191 30.994 171 109 3 107 275 114 277 2.22e-14 73.9
Msa0044450 MtrunA17_Chr7g0273271 28.000 225 131 6 12 234 16 211 7.54e-13 67.8
Msa0044450 MtrunA17_Chr5g0434241 38.384 99 56 3 256 352 1 96 2.21e-12 63.9
Msa0044450 MtrunA17_Chr6g0450291 38.384 99 56 3 256 352 1 96 7.01e-12 64.3
Msa0044450 MtrunA17_Chr6g0450241 38.384 99 56 3 256 352 1 96 1.27e-11 63.5
Msa0044450 MtrunA17_Chr6g0450281 38.384 99 56 3 256 352 1 96 1.27e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044450 AT5G26340.1 77.071 519 117 2 1 518 1 518 0.0 833
Msa0044450 AT4G02050.2 55.945 513 215 6 1 507 1 508 0.0 605
Msa0044450 AT4G02050.1 55.945 513 215 6 1 507 1 508 0.0 605
Msa0044450 AT1G11260.1 55.233 516 226 4 1 513 1 514 0.0 582
Msa0044450 AT1G77210.2 56.238 505 212 7 1 500 1 501 0.0 567
Msa0044450 AT1G77210.1 56.238 505 212 7 1 500 1 501 0.0 567
Msa0044450 AT5G23270.1 55.400 500 219 3 1 497 1 499 0.0 565
Msa0044450 AT3G19940.1 54.451 483 216 4 22 503 25 504 0.0 563
Msa0044450 AT5G26250.1 57.769 502 207 4 7 507 7 504 0.0 562
Msa0044450 AT1G50310.1 54.365 504 217 7 22 523 25 517 0.0 561
Msa0044450 AT3G05960.1 57.058 503 210 4 7 507 6 504 0.0 555
Msa0044450 AT4G21480.1 54.819 498 219 4 8 503 9 502 0.0 539
Msa0044450 AT3G19930.1 50.898 501 237 4 12 511 13 505 0.0 525
Msa0044450 AT3G19930.2 50.898 501 237 4 12 511 13 505 0.0 525
Msa0044450 AT1G34580.1 47.647 510 248 8 1 499 1 502 4.66e-170 490
Msa0044450 AT1G07340.1 51.224 490 234 3 12 500 13 498 2.22e-168 486
Msa0044450 AT5G61520.1 48.096 499 248 7 16 508 18 511 5.40e-162 470
Msa0044450 AT1G34580.2 47.484 457 229 6 49 499 1 452 2.60e-152 443
Msa0044450 AT5G61520.2 47.109 467 236 6 48 508 2 463 2.91e-146 428
Msa0044450 AT1G77210.3 58.286 350 142 4 152 500 6 352 3.36e-144 419
Msa0044450 AT1G50310.2 52.941 374 164 6 152 523 11 374 2.44e-141 412
Msa0044450 AT2G18480.1 30.297 472 281 10 36 485 36 481 3.38e-59 204
Msa0044450 AT2G16130.1 29.730 481 290 8 26 483 30 485 3.90e-58 201
Msa0044450 AT2G16120.1 30.544 478 290 10 26 483 30 485 7.10e-58 201
Msa0044450 AT4G36670.1 30.561 481 285 10 26 483 21 475 2.42e-56 196
Msa0044450 AT3G18830.1 28.750 480 299 7 26 485 40 496 2.21e-55 194
Msa0044450 AT5G59250.1 31.837 490 283 13 22 489 98 558 3.84e-51 184
Msa0044450 AT2G43330.1 28.400 500 321 11 26 513 35 509 2.07e-50 181
Msa0044450 AT2G20780.1 27.572 486 311 9 10 483 40 496 1.25e-49 179
Msa0044450 AT1G30220.1 31.233 365 218 7 1 352 1 345 1.89e-48 176
Msa0044450 AT2G20780.2 28.780 410 275 6 83 483 37 438 6.17e-48 173
Msa0044450 AT1G08930.1 30.625 480 288 13 10 483 47 487 1.14e-47 173
Msa0044450 AT1G08930.2 30.625 480 288 13 10 483 47 487 1.14e-47 173
Msa0044450 AT5G27350.1 27.329 483 314 10 10 490 20 467 1.15e-45 167
Msa0044450 AT5G17010.1 29.209 493 281 13 23 486 48 501 1.55e-45 167
Msa0044450 AT5G17010.3 29.209 493 281 13 23 486 48 501 1.55e-45 167
Msa0044450 AT5G17010.4 29.209 493 281 13 23 486 48 501 1.55e-45 167
Msa0044450 AT3G05165.3 26.042 480 310 9 10 483 19 459 1.56e-45 166
Msa0044450 AT3G05165.2 26.042 480 310 9 10 483 19 459 1.56e-45 166
Msa0044450 AT3G05165.1 26.042 480 310 9 10 483 19 459 1.56e-45 166
Msa0044450 AT1G08890.1 30.807 409 264 8 83 487 67 460 2.00e-45 166
Msa0044450 AT1G08900.5 31.514 403 257 6 85 483 25 412 1.00e-44 163
Msa0044450 AT1G08900.3 31.514 403 257 6 85 483 59 446 2.21e-44 163
Msa0044450 AT1G08900.1 31.514 403 257 6 85 483 67 454 2.32e-44 163
Msa0044450 AT1G08900.2 31.514 403 257 6 85 483 67 454 2.32e-44 163
Msa0044450 AT3G05160.1 26.250 480 309 10 10 483 10 450 1.19e-43 161
Msa0044450 AT3G05160.3 27.901 405 269 6 85 483 14 401 2.04e-43 159
Msa0044450 AT3G05160.2 27.901 405 269 6 85 483 14 401 2.04e-43 159
Msa0044450 AT3G03090.1 29.873 472 291 14 30 486 55 501 3.56e-43 160
Msa0044450 AT1G75220.1 31.771 384 242 7 107 483 112 482 8.09e-43 159
Msa0044450 AT5G27360.1 26.132 486 316 9 10 490 24 471 1.72e-42 158
Msa0044450 AT5G16150.2 28.125 480 301 11 10 483 97 538 2.09e-42 159
Msa0044450 AT5G16150.1 28.125 480 301 11 10 483 97 538 2.09e-42 159
Msa0044450 AT5G16150.3 28.125 480 301 11 10 483 97 538 2.09e-42 159
Msa0044450 AT3G05400.1 28.333 480 298 13 11 483 15 455 2.19e-42 157
Msa0044450 AT5G27360.3 26.132 486 316 9 10 490 72 519 5.45e-42 157
Msa0044450 AT2G48020.2 27.047 403 279 5 83 483 68 457 3.74e-41 154
Msa0044450 AT2G48020.1 27.047 403 279 5 83 483 68 457 3.74e-41 154
Msa0044450 AT5G18840.1 28.224 411 279 6 83 490 84 481 2.80e-40 152
Msa0044450 AT1G05030.1 27.991 443 300 10 46 483 85 513 3.64e-40 152
Msa0044450 AT3G05165.6 25.270 463 301 9 1 457 10 433 3.68e-40 152
Msa0044450 AT3G05155.1 27.764 407 275 7 83 486 67 457 6.68e-40 150
Msa0044450 AT1G05030.2 28.049 410 278 9 79 483 64 461 1.36e-39 150
Msa0044450 AT3G05165.4 27.126 435 271 11 1 428 10 405 3.50e-39 149
Msa0044450 AT3G05165.5 27.126 435 271 11 1 428 10 405 3.50e-39 149
Msa0044450 AT1G54730.2 26.998 463 300 9 28 487 38 465 6.34e-39 148
Msa0044450 AT3G05150.2 27.699 491 312 11 9 492 24 478 7.30e-39 148
Msa0044450 AT3G05150.1 27.615 478 307 10 9 483 24 465 1.58e-38 147
Msa0044450 AT3G05150.3 27.615 478 307 10 9 483 24 465 1.58e-38 147
Msa0044450 AT4G16480.2 30.458 371 215 9 1 352 1 347 1.75e-38 149
Msa0044450 AT4G16480.3 30.458 371 215 9 1 352 1 347 1.75e-38 149
Msa0044450 AT4G16480.1 30.458 371 215 9 1 352 1 347 1.75e-38 149
Msa0044450 AT5G27360.2 27.368 380 261 6 113 490 1 367 2.32e-38 144
Msa0044450 AT5G27360.5 27.368 380 261 6 113 490 1 367 2.32e-38 144
Msa0044450 AT1G19450.1 29.921 381 253 6 107 483 113 483 3.61e-38 146
Msa0044450 AT1G08920.1 27.970 404 274 7 83 483 72 461 5.61e-38 145
Msa0044450 AT2G35740.1 30.504 377 223 12 20 382 24 375 8.34e-38 147
Msa0044450 AT3G05400.2 30.504 377 237 11 114 483 77 435 1.83e-36 140
Msa0044450 AT1G08900.4 30.663 362 232 6 85 442 67 413 2.58e-36 140
Msa0044450 AT1G08920.2 27.451 408 278 7 83 483 72 468 5.89e-36 140
Msa0044450 AT1G54730.3 25.581 430 284 7 28 455 38 433 1.98e-34 135
Msa0044450 AT4G04760.3 29.610 385 253 7 104 483 33 404 2.99e-34 134
Msa0044450 AT1G08920.3 28.075 374 252 7 83 453 72 431 3.61e-34 134
Msa0044450 AT4G04760.1 29.610 385 253 7 104 483 92 463 5.92e-34 134
Msa0044450 AT4G04750.1 26.702 382 263 6 106 483 99 467 2.12e-33 133
Msa0044450 AT4G04750.2 26.702 382 263 6 106 483 99 467 2.12e-33 133
Msa0044450 AT4G04750.3 26.702 382 263 6 106 483 143 511 2.33e-33 133
Msa0044450 AT1G54730.5 26.781 407 262 8 83 487 72 444 3.06e-32 129
Msa0044450 AT1G67300.2 24.717 441 318 7 46 483 57 486 8.78e-32 128
Msa0044450 AT1G79820.2 26.351 444 304 9 46 483 60 486 2.40e-31 127
Msa0044450 AT1G79820.1 26.351 444 304 9 46 483 60 486 2.40e-31 127
Msa0044450 AT1G67300.6 24.444 405 286 9 46 446 57 445 3.15e-31 126
Msa0044450 AT1G67300.7 24.444 405 286 9 46 446 57 445 3.15e-31 126
Msa0044450 AT1G67300.1 24.605 443 315 9 46 483 57 485 8.38e-31 125
Msa0044450 AT1G67300.3 24.605 443 315 9 46 483 57 485 8.38e-31 125
Msa0044450 AT1G67300.4 25.330 379 267 7 46 421 57 422 1.62e-30 124
Msa0044450 AT1G67300.5 25.330 379 267 7 46 421 57 422 1.62e-30 124
Msa0044450 AT5G27360.4 25.721 416 266 9 10 420 24 401 1.71e-30 124
Msa0044450 AT1G79820.4 26.154 390 272 7 46 433 60 435 3.48e-30 123
Msa0044450 AT1G54730.9 26.700 397 253 9 28 421 38 399 1.94e-29 120
Msa0044450 AT1G54730.7 26.700 397 253 9 28 421 38 399 1.94e-29 120
Msa0044450 AT2G48020.4 28.707 317 209 5 83 397 68 369 5.19e-28 115
Msa0044450 AT4G04760.2 27.877 391 249 8 104 483 92 460 7.44e-28 117
Msa0044450 AT1G54730.4 25.600 375 243 7 83 455 72 412 8.32e-28 115
Msa0044450 AT1G54730.11 27.523 327 204 6 28 352 38 333 1.62e-26 110
Msa0044450 AT3G05155.2 28.309 272 180 5 83 352 67 325 1.07e-25 108
Msa0044450 AT2G48020.3 29.412 272 180 4 83 352 68 329 3.55e-25 107
Msa0044450 AT5G17010.2 25.153 489 246 12 23 486 45 438 6.90e-25 107
Msa0044450 AT3G20460.1 23.762 404 291 6 83 483 93 482 3.21e-24 106
Msa0044450 AT1G54730.10 26.910 301 190 5 28 326 38 310 1.94e-23 101
Msa0044450 AT1G54730.6 26.910 301 190 5 28 326 38 310 1.94e-23 101
Msa0044450 AT1G54730.8 25.513 341 218 7 83 421 72 378 5.87e-23 101
Msa0044450 AT1G79820.3 24.099 444 266 10 46 483 60 438 1.05e-18 89.4
Msa0044450 AT3G51490.3 30.601 183 124 3 88 269 2 182 4.79e-18 88.2
Msa0044450 AT3G51490.3 27.126 247 145 9 260 485 436 668 1.50e-14 77.0
Msa0044450 AT3G51490.1 30.601 183 124 3 88 269 52 232 5.56e-18 87.8
Msa0044450 AT3G51490.2 30.601 183 124 3 88 269 52 232 5.66e-18 87.8
Msa0044450 AT3G51490.2 27.126 247 145 9 260 485 486 718 1.91e-14 76.6
Msa0044450 AT1G20840.2 33.000 200 123 6 77 267 31 228 1.07e-16 84.0
Msa0044450 AT1G20840.1 33.000 200 123 6 77 267 31 228 1.07e-16 84.0
Msa0044450 AT1G79820.5 24.224 322 183 6 126 446 77 338 1.93e-15 78.6
Msa0044450 AT4G35300.4 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.4 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.8 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.8 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.6 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.6 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.11 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.11 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.1 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.1 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.10 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.10 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.7 29.012 162 113 2 107 267 70 230 5.47e-14 75.5
Msa0044450 AT4G35300.7 26.000 250 156 7 257 485 483 724 2.56e-11 67.0
Msa0044450 AT4G35300.9 29.012 162 113 2 107 267 70 230 5.61e-14 75.1
Msa0044450 AT4G35300.9 26.000 250 156 7 257 485 473 714 2.37e-11 67.0
Msa0044450 AT4G35300.2 29.012 162 113 2 107 267 70 230 5.61e-14 75.1
Msa0044450 AT4G35300.2 26.000 250 156 7 257 485 473 714 2.37e-11 67.0
Msa0044450 AT4G35300.3 29.012 162 113 2 107 267 70 230 5.61e-14 75.1
Msa0044450 AT4G35300.3 26.000 250 156 7 257 485 473 714 2.37e-11 67.0
Msa0044450 AT4G35300.5 26.000 250 156 7 257 485 286 527 2.83e-11 66.2

Find 131 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAGTTTC+AGG 0.113291 1_1:-75998915 Msa0044450:intron
ATTCACTTCATCATTGTATT+TGG 0.179815 1_1:-75998502 Msa0044450:CDS
CTTTACTCTGCTGTGATTAC+TGG 0.220334 1_1:-75994783 Msa0044450:CDS
CCAGCATTACTCCTCACTTT+AGG 0.220398 1_1:-75995417 Msa0044450:CDS
CCACGTTCAATGAGACTATT+TGG 0.243632 1_1:+75995372 None:intergenic
CAGCATTACTCCTCACTTTA+GGG 0.249351 1_1:-75995416 Msa0044450:CDS
AATATATTCGGTTGATAAAC+TGG 0.252057 1_1:-75994730 Msa0044450:CDS
GTCTTACTTGGCTGTGGAAT+TGG 0.261288 1_1:-75998333 Msa0044450:CDS
TGTCATTTCCATTGCCCTAA+TGG 0.296156 1_1:-75995196 Msa0044450:intron
ATGCTTTGTTATTTCAAGTT+TGG 0.300180 1_1:-75994411 Msa0044450:CDS
TGTGGAAGCAGCATTGGTTT+TGG 0.334417 1_1:-75994284 Msa0044450:CDS
CTCTGTGTCATCTCTTCAAT+AGG 0.338403 1_1:+75994309 None:intergenic
CATTATCATTTCATGCATAA+TGG 0.342417 1_1:-75998961 Msa0044450:CDS
TTGGGGTTGGAGGATATCTC+TGG 0.356303 1_1:-75995454 Msa0044450:CDS
CCAGTTCTGTTCAACACATT+GGG 0.363609 1_1:-75994825 Msa0044450:CDS
GGTCATGGGGTCCACTTGCT+TGG 0.367069 1_1:-75994542 Msa0044450:CDS
ATAGGGACATTCTTTGTCTC+AGG 0.372635 1_1:+75994327 None:intergenic
AACGATAGTCTCAATATATT+CGG 0.386732 1_1:-75994742 Msa0044450:CDS
CTTATGTTTGGTTATGATGT+TGG 0.388237 1_1:-75998924 Msa0044450:CDS
CACGTTCAATGAGACTATTT+GGG 0.388376 1_1:+75995373 None:intergenic
GCCACCGGAGGTCTTATGTT+TGG 0.389666 1_1:-75998936 Msa0044450:CDS
ATTGTATTTGGCGGGTTTAA+CGG 0.394528 1_1:-75998490 Msa0044450:CDS
TTTCAGCTTGATATCACTCT+TGG 0.399756 1_1:-75996314 Msa0044450:CDS
TGGAGGATATCTCTGGGATT+GGG 0.399827 1_1:-75995447 Msa0044450:CDS
CACTTCATCATTGTATTTGG+CGG 0.400462 1_1:-75998499 Msa0044450:CDS
ATGCATGAAATGATAATGAT+AGG 0.401995 1_1:+75998966 None:intergenic
TAACAGAATCAAAGGTCATT+GGG 0.402246 1_1:-75995472 Msa0044450:intron
CCCAATGTGTTGAACAGAAC+TGG 0.402584 1_1:+75994825 None:intergenic
GCAATCTCTGAAAGGAAAAC+TGG 0.403056 1_1:+75996371 None:intergenic
TTGGAGGATATCTCTGGGAT+TGG 0.417371 1_1:-75995448 Msa0044450:CDS
AACTGGAGCATAGAACATTA+TGG 0.417549 1_1:+75994842 None:intergenic
AATGCTCCACGTATTCTTGA+AGG 0.430135 1_1:+75996347 None:intergenic
GCTGGCTTCTTCTTCATAGC+TGG 0.430415 1_1:-75998408 Msa0044450:CDS
AAGATTAGTACAAACCATTA+GGG 0.436585 1_1:+75995182 None:intergenic
TGTCAGCATTTGCATGGTCA+TGG 0.444330 1_1:-75994557 Msa0044450:CDS
TCTTATACAACTCGAGTACT+AGG 0.451742 1_1:-75998453 Msa0044450:CDS
ATCGTTGGTAGGGTCTTACT+TGG 0.458508 1_1:-75998345 Msa0044450:CDS
CCACTAGAGACTCGTTCTGC+AGG 0.462076 1_1:-75994498 Msa0044450:CDS
GTCAGCATTTGCATGGTCAT+GGG 0.464567 1_1:-75994556 Msa0044450:CDS
TCAAATGTTCTTGTCACAAA+TGG 0.472443 1_1:-75994676 Msa0044450:CDS
ATAACAGAATCAAAGGTCAT+TGG 0.475393 1_1:-75995473 Msa0044450:intron
AGAGAGTGTGGAAGCAGCAT+TGG 0.481898 1_1:-75994290 Msa0044450:CDS
CAGATATTTCAGCAATTCAC+TGG 0.497047 1_1:-75994873 Msa0044450:CDS
ATAAGGAACTTACTTGTTGG+TGG 0.500032 1_1:+75996262 None:intergenic
GAACGTGGTCACTTGGACAA+AGG 0.500261 1_1:-75995357 Msa0044450:CDS
TCCAGTTCTGTTCAACACAT+TGG 0.500531 1_1:-75994826 Msa0044450:CDS
GGCAAGTCGTGTTGCTAAAG+AGG 0.500547 1_1:-75995268 Msa0044450:CDS
GAATCAAAGGTCATTGGGGT+TGG 0.506170 1_1:-75995467 Msa0044450:CDS
CGGCAACGACAGAGAATTTG+AGG 0.506930 1_1:-75999000 Msa0044450:CDS
ACTTCATCATTGTATTTGGC+GGG 0.508139 1_1:-75998498 Msa0044450:CDS
GGTAGGGTCTTACTTGGCTG+TGG 0.508697 1_1:-75998339 Msa0044450:CDS
TCTGTGTCATCTCTTCAATA+GGG 0.513178 1_1:+75994310 None:intergenic
TGGAAAGAACTTCTTCAAGA+AGG 0.515645 1_1:+75998602 None:intergenic
CCTAAAGTGAGGAGTAATGC+TGG 0.516671 1_1:+75995417 None:intergenic
TCAAAGGTCATTGGGGTTGG+AGG 0.518817 1_1:-75995464 Msa0044450:CDS
CTTTCGAGAGTTCCTCAGAA+TGG 0.520137 1_1:+75994619 None:intergenic
AGTTGTATAAGACGCGAAGA+AGG 0.523063 1_1:+75998464 None:intergenic
TTTAGGGGCTTACTTAGTAG+TGG 0.523678 1_1:-75995400 Msa0044450:CDS
CTTGAAGAAGTTCTTTCCAA+CGG 0.529312 1_1:-75998598 Msa0044450:CDS
TCTCATTGAACGTGGTCACT+TGG 0.531256 1_1:-75995364 Msa0044450:CDS
TTCTCATGCTCATCGTTGGT+AGG 0.531973 1_1:-75998356 Msa0044450:CDS
ATAATTACCATGACGGGAGG+AGG 0.533380 1_1:-75999032 None:intergenic
AGACAGACGACGGAATCAGA+TGG 0.534245 1_1:-75998570 Msa0044450:CDS
CATTCTTTGTCTCAGGGACA+AGG 0.534348 1_1:+75994334 None:intergenic
AAGAGATGACACAGAGAGTG+TGG 0.538985 1_1:-75994302 Msa0044450:CDS
GAGACAAGATCATTTCTGCC+AGG 0.539287 1_1:+75994204 None:intergenic
TCTAGTGGAAATATCTCACT+TGG 0.540947 1_1:+75994513 None:intergenic
TGGAATTGGATTTGCAAACC+AGG 0.541646 1_1:-75998319 Msa0044450:intron
TGCAGCTCTTGTAGTTGTGA+TGG 0.545486 1_1:-75994592 Msa0044450:CDS
TGGGGTTGGAGGATATCTCT+GGG 0.548277 1_1:-75995453 Msa0044450:CDS
TGAAATAACAAAGCATTGAA+AGG 0.549846 1_1:+75994418 None:intergenic
GGAAAGAACTTCTTCAAGAA+GGG 0.551194 1_1:+75998603 None:intergenic
AGGCTCACAATGTTGATCGC+TGG 0.555620 1_1:-75998426 Msa0044450:CDS
CACTAGAGACTCGTTCTGCA+GGG 0.555738 1_1:-75994497 Msa0044450:CDS
AGCATTACTCCTCACTTTAG+GGG 0.556506 1_1:-75995415 Msa0044450:CDS
TCTCATGCTCATCGTTGGTA+GGG 0.559362 1_1:-75998355 Msa0044450:CDS
AACCTTCTCATGCTCATCGT+TGG 0.561672 1_1:-75998360 Msa0044450:CDS
GTCGTCTGTCTCAAGACCGT+TGG 0.563013 1_1:+75998582 None:intergenic
TTGAAGGTGCAATCTCTGAA+AGG 0.568570 1_1:+75996363 None:intergenic
AGACAAGATCATTTCTGCCA+GGG 0.570266 1_1:+75994205 None:intergenic
TGCATAATGGCTGCCACCGG+AGG 0.573918 1_1:-75998948 Msa0044450:CDS
GAGGTCGGTTATTGCGCTTG+AGG 0.575455 1_1:+75995223 None:intergenic
CGAAAGCTATTACTCGAAGC+TGG 0.575954 1_1:-75994702 Msa0044450:CDS
CAACTCGAGTACTAGGAAGA+AGG 0.577102 1_1:-75998446 Msa0044450:CDS
GCTGAAGCCTCCTCCCGTCA+TGG 0.578660 1_1:+75999025 None:intergenic
AGTACAAACCATTAGGGCAA+TGG 0.580130 1_1:+75995188 None:intergenic
GCTGTTCTGAGAAAGATTCG+TGG 0.584754 1_1:-75995330 Msa0044450:CDS
ACGGGAGGAGGCTTCAGCGG+CGG 0.586483 1_1:-75999020 Msa0044450:CDS
GTGCAATGACAGCAGTGAAG+AGG 0.587387 1_1:+75994448 None:intergenic
CGCTTGAGGAGATTTCTGAA+CGG 0.588562 1_1:+75995237 None:intergenic
TAGGGACATTCTTTGTCTCA+GGG 0.588827 1_1:+75994328 None:intergenic
TCATGCATAATGGCTGCCAC+CGG 0.589627 1_1:-75998951 Msa0044450:CDS
CTAAAGTGAGGAGTAATGCT+GGG 0.591713 1_1:+75995418 None:intergenic
ATGGTGATAGCAATTGTACT+AGG 0.593741 1_1:-75994657 Msa0044450:CDS
ATTCTGAGGAACTCTCGAAA+GGG 0.594512 1_1:-75994617 Msa0044450:CDS
CATTCTGAGGAACTCTCGAA+AGG 0.596408 1_1:-75994618 Msa0044450:CDS
GACAGACGACGGAATCAGAT+GGG 0.599473 1_1:-75998569 Msa0044450:CDS
CTCTGAAAGGAAAACTGGCA+CGG 0.599482 1_1:+75996376 None:intergenic
CCTGCAGAACGAGTCTCTAG+TGG 0.601195 1_1:+75994498 None:intergenic
TCTTTGCATAACAGAATCAA+AGG 0.602087 1_1:-75995480 Msa0044450:intron
AAGTGAATAGCTGCAACCCT+TGG 0.602447 1_1:+75998517 None:intergenic
ATATATTCGGTTGATAAACT+GGG 0.603944 1_1:-75994729 Msa0044450:CDS
GTACATGGTGGAAATTCCCC+TGG 0.608228 1_1:-75994222 Msa0044450:CDS
ATAACCAAACATAAGACCTC+CGG 0.610933 1_1:+75998932 None:intergenic
TGTTGGTGGCATAGTTGACA+AGG 0.611158 1_1:+75996276 None:intergenic
AGGATATCTCTGGGATTGGG+AGG 0.614479 1_1:-75995444 Msa0044450:CDS
TGAGTTCTTAGAGTTAGTAG+AGG 0.615275 1_1:-75995289 Msa0044450:CDS
ATGACGGGAGGAGGCTTCAG+CGG 0.620028 1_1:-75999023 Msa0044450:CDS
TCAGCATTTGCATGGTCATG+GGG 0.621192 1_1:-75994555 Msa0044450:CDS
ATTGAAGATGAGAAAGTACA+TGG 0.621432 1_1:-75994237 Msa0044450:CDS
GACAAGATCATTTCTGCCAG+GGG 0.621853 1_1:+75994206 None:intergenic
CTAAGTAAGCCCCTAAAGTG+AGG 0.625282 1_1:+75995406 None:intergenic
CAAAGTGAAGGACCATTCTG+AGG 0.625954 1_1:-75994631 Msa0044450:CDS
TCTACTAACTCTAAGAACTC+AGG 0.628704 1_1:+75995291 None:intergenic
GCAATGGAAATGACAAGTTG+AGG 0.629289 1_1:+75995204 None:intergenic
TACTGCAAATACGATAACCA+AGG 0.630998 1_1:-75998534 Msa0044450:CDS
AAGAACTTCTTCAAGAAGGG+TGG 0.634008 1_1:+75998606 None:intergenic
TCTGAGAAAGATTCGTGGCA+CGG 0.641034 1_1:-75995325 Msa0044450:CDS
TGTACTAGGAATCAAAGTGA+AGG 0.642063 1_1:-75994643 Msa0044450:CDS
TGGAAATGACAAGTTGAGGT+CGG 0.646516 1_1:+75995208 None:intergenic
ACGTTCAATGAGACTATTTG+GGG 0.648447 1_1:+75995374 None:intergenic
ACTGCAAATACGATAACCAA+GGG 0.652200 1_1:-75998533 Msa0044450:CDS
TACCAACGATGAGCATGAGA+AGG 0.652678 1_1:+75998358 None:intergenic
CTTGGAATAAGCCAAGCAAG+TGG 0.653091 1_1:+75994531 None:intergenic
AACAGAATCAAAGGTCATTG+GGG 0.657099 1_1:-75995471 Msa0044450:intron
AAAATAATTACCATGACGGG+AGG 0.661291 1_1:-75999035 None:intergenic
CCAAATAGTCTCATTGAACG+TGG 0.670098 1_1:-75995372 Msa0044450:CDS
ACCAAACATAAGACCTCCGG+TGG 0.683703 1_1:+75998935 None:intergenic
GAAGATGAGAAAGTACATGG+TGG 0.696620 1_1:-75994234 Msa0044450:CDS
ATTGCACCTTCAAGAATACG+TGG 0.700035 1_1:-75996353 Msa0044450:CDS
AACGGTCTTGAGACAGACGA+CGG 0.737114 1_1:-75998580 Msa0044450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATATTTTAATT+CGG + chr1_1:75997317-75997336 None:intergenic 0.0%
!!! ATTTTATTTTATATTTTTAT+AGG - chr1_1:75997545-75997564 Msa0044450:intron 0.0%
!!! AATTAGAATTATATTTTTGA+AGG + chr1_1:75994409-75994428 None:intergenic 10.0%
!!! TATAAGTTAAATTTTGTTTT+GGG + chr1_1:75995921-75995940 None:intergenic 10.0%
!!! TTATAAGTTAAATTTTGTTT+TGG + chr1_1:75995922-75995941 None:intergenic 10.0%
!!! AATTGATTTTACATTTATTT+TGG - chr1_1:75997086-75997105 Msa0044450:intron 10.0%
!! CCAAAAAAAAATAAATTAAA+AGG + chr1_1:75997182-75997201 None:intergenic 10.0%
!!! CCTTTTAATTTATTTTTTTT+TGG - chr1_1:75997179-75997198 Msa0044450:intron 10.0%
!! AACTATTGAAATAATTAAAA+GGG + chr1_1:75997214-75997233 None:intergenic 10.0%
!! TAACTATTGAAATAATTAAA+AGG + chr1_1:75997215-75997234 None:intergenic 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG - chr1_1:75997347-75997366 Msa0044450:intron 10.0%
!!! TTTATAGTACTATTTTCTTA+TGG - chr1_1:75994464-75994483 Msa0044450:CDS 15.0%
!!! ATTCATAAATTTTATGTAGT+GGG + chr1_1:75995018-75995037 None:intergenic 15.0%
!!! GATATTTATTTTGAAATTGA+AGG + chr1_1:75995055-75995074 None:intergenic 15.0%
!!! ATTTCACATTTTAAATACAA+TGG - chr1_1:75995146-75995165 Msa0044450:intron 15.0%
!!! ATAATTTCACATATTTTACA+TGG - chr1_1:75995182-75995201 Msa0044450:intron 15.0%
!! ATAGCAAAATTTGTATTTAT+TGG - chr1_1:75996006-75996025 Msa0044450:intron 15.0%
!! AAATAATATAAAGATTTCCT+TGG - chr1_1:75996351-75996370 Msa0044450:CDS 15.0%
!! AATAATATAAAGATTTCCTT+GGG - chr1_1:75996352-75996371 Msa0044450:CDS 15.0%
!! ATAAATAAATAAAGGTTTCT+TGG - chr1_1:75996386-75996405 Msa0044450:intron 15.0%
!!! GAACTTTTTTTTTTTTTTGA+GGG + chr1_1:75996618-75996637 None:intergenic 15.0%
!! TTCTATATTAAGAATTTCTT+TGG + chr1_1:75997623-75997642 None:intergenic 15.0%
!! ATTGTACAATATTCATAAAT+TGG + chr1_1:75997689-75997708 None:intergenic 15.0%
!! TCAATAAAAGGTTATAAAAA+GGG + chr1_1:75998245-75998264 None:intergenic 15.0%
!! ATCAATAAAAGGTTATAAAA+AGG + chr1_1:75998246-75998265 None:intergenic 15.0%
!! CTAACAAAACATATTTATGA+TGG - chr1_1:75994543-75994562 Msa0044450:CDS 20.0%
!!! TGGTTGATTTAATTGTTTTA+AGG - chr1_1:75994572-75994591 Msa0044450:CDS 20.0%
!!! TTGATTTAATTGTTTTAAGG+CGG - chr1_1:75994575-75994594 Msa0044450:CDS 20.0%
!!! GATTCATAAATTTTATGTAG+TGG + chr1_1:75995019-75995038 None:intergenic 20.0%
!!! TTTACATGGATTTTTAAAGT+TGG - chr1_1:75995196-75995215 Msa0044450:intron 20.0%
!!! TAGGTTTTGTAATTTTTATC+AGG - chr1_1:75995372-75995391 Msa0044450:CDS 20.0%
!!! ACAAAAATTATAGTCACTTT+AGG - chr1_1:75996048-75996067 Msa0044450:intron 20.0%
!!! AATTACTTTTATCTTACGAT+TGG + chr1_1:75996155-75996174 None:intergenic 20.0%
!! GGTATAGATATAATAATCTA+AGG - chr1_1:75996249-75996268 Msa0044450:intron 20.0%
!!! GGAACTTTTTTTTTTTTTTG+AGG + chr1_1:75996619-75996638 None:intergenic 20.0%
!!! TCTTATTTTAGTCATAACTT+TGG - chr1_1:75996659-75996678 Msa0044450:intron 20.0%
!! TGACATATTAGTTCATTAAT+TGG - chr1_1:75997000-75997019 Msa0044450:intron 20.0%
!! TTATATAAAAGTCTAACACA+GGG - chr1_1:75997109-75997128 Msa0044450:intron 20.0%
!!! ACAATTTTATTGTTTTATCC+AGG + chr1_1:75997157-75997176 None:intergenic 20.0%
!!! AAGCATATGTGTTATAATTT+TGG + chr1_1:75997579-75997598 None:intergenic 20.0%
!! ATAATTCAGCTATCAATAAA+AGG + chr1_1:75998257-75998276 None:intergenic 20.0%
!! ATGCATGAAATGATAATGAT+AGG + chr1_1:75994254-75994273 None:intergenic 25.0%
! CATTATCATTTCATGCATAA+TGG - chr1_1:75994256-75994275 Msa0044450:CDS 25.0%
! TTCAAACCTTAATATGTGTT+TGG - chr1_1:75994378-75994397 Msa0044450:CDS 25.0%
!! TACTATTTTCTTATGGAAAG+TGG - chr1_1:75994471-75994490 Msa0044450:CDS 25.0%
!!! CATATTTATGATGGATGATA+TGG - chr1_1:75994552-75994571 Msa0044450:CDS 25.0%
! ATTCACTTCATCATTGTATT+TGG - chr1_1:75994715-75994734 Msa0044450:CDS 25.0%
! AAAATCAAATTACACTAACC+TGG + chr1_1:75994919-75994938 None:intergenic 25.0%
!!! TATTTATTTTTTGTGCGACA+TGG + chr1_1:75994963-75994982 None:intergenic 25.0%
!! CTAAGTGTAACAATTTTACA+TGG - chr1_1:75995107-75995126 Msa0044450:intron 25.0%
! TGGATCGAAAAAAAAATACA+TGG - chr1_1:75995216-75995235 Msa0044450:CDS 25.0%
!!! TGCTAACTTTTTCATCTAAT+TGG - chr1_1:75995893-75995912 Msa0044450:intron 25.0%
! TGAAAACATTCATAAATCAC+AGG - chr1_1:75995962-75995981 Msa0044450:intron 25.0%
!! TCACTTTAGGAAAAACAAAA+AGG - chr1_1:75996061-75996080 Msa0044450:intron 25.0%
! TATCCTAAACTTTCAATCAA+TGG - chr1_1:75996228-75996247 Msa0044450:intron 25.0%
!! ATACCATTGATTGAAAGTTT+AGG + chr1_1:75996234-75996253 None:intergenic 25.0%
!!! ACCAAAAGGTTTTAAAAGTT+CGG + chr1_1:75996321-75996340 None:intergenic 25.0%
!!! TTTATTTTTACAAAGTCCCA+AGG + chr1_1:75996371-75996390 None:intergenic 25.0%
! AGTATTACTTAAGGAATCAA+AGG + chr1_1:75996691-75996710 None:intergenic 25.0%
!!! AGTCACTAATATTGTTTTGA+TGG - chr1_1:75996811-75996830 Msa0044450:intron 25.0%
! ATTATAAGGAACTTACTTGT+TGG + chr1_1:75996961-75996980 None:intergenic 25.0%
! AAGGATGCAATACAATTATA+AGG + chr1_1:75996975-75996994 None:intergenic 25.0%
! GAACTAATATGTCAAACAAA+AGG + chr1_1:75996994-75997013 None:intergenic 25.0%
! GTTATATAAAAGTCTAACAC+AGG - chr1_1:75997108-75997127 Msa0044450:intron 25.0%
! AAGATTAGTACAAACCATTA+GGG + chr1_1:75998038-75998057 None:intergenic 25.0%
! TAAGATTAGTACAAACCATT+AGG + chr1_1:75998039-75998058 None:intergenic 25.0%
!! TATTTTCGCTATTGCAATTA+GGG + chr1_1:75998184-75998203 None:intergenic 25.0%
!! TTATTTTCGCTATTGCAATT+AGG + chr1_1:75998185-75998204 None:intergenic 25.0%
! AATAAAAAACTAAGATGTCG+CGG - chr1_1:75998200-75998219 Msa0044450:intron 25.0%
! TTTGAGCAACATTAATGAAA+AGG + chr1_1:75998311-75998330 None:intergenic 25.0%
! TCATTAATGTTGCTCAAATA+TGG - chr1_1:75998313-75998332 Msa0044450:intron 25.0%
! AACGATAGTCTCAATATATT+CGG - chr1_1:75998475-75998494 Msa0044450:CDS 25.0%
!!! AATATATTCGGTTGATAAAC+TGG - chr1_1:75998487-75998506 Msa0044450:CDS 25.0%
!!! ATATATTCGGTTGATAAACT+GGG - chr1_1:75998488-75998507 Msa0044450:CDS 25.0%
!!! TGAAATAACAAAGCATTGAA+AGG + chr1_1:75998802-75998821 None:intergenic 25.0%
!!! ATGCTTTGTTATTTCAAGTT+TGG - chr1_1:75998806-75998825 Msa0044450:intron 25.0%
CTTATGTTTGGTTATGATGT+TGG - chr1_1:75994293-75994312 Msa0044450:CDS 30.0%
GAAAGAAGTTAGCATTCATT+AGG + chr1_1:75994330-75994349 None:intergenic 30.0%
AACCTTAATATGTGTTTGGT+CGG - chr1_1:75994382-75994401 Msa0044450:CDS 30.0%
TACTCTTACACTAGTGAAAT+TGG + chr1_1:75994503-75994522 None:intergenic 30.0%
!! TGAAATTGAAGGAGTATTAG+TGG + chr1_1:75995044-75995063 None:intergenic 30.0%
CATCATTAGGAGACAAAAAT+AGG - chr1_1:75995353-75995372 Msa0044450:CDS 30.0%
TACTGTTGTGTGTATATACT+AGG - chr1_1:75995421-75995440 Msa0044450:CDS 30.0%
!! ACTAGGAGAAATGTTTTTGA+TGG - chr1_1:75995438-75995457 Msa0044450:CDS 30.0%
TTGGACTTATGCTAATAGTA+AGG - chr1_1:75996025-75996044 Msa0044450:intron 30.0%
AGAAAAAGAATGATGCATAG+TGG - chr1_1:75996292-75996311 Msa0044450:CDS 30.0%
!!! GAACTTTTAAAACCTTTTGG+TGG - chr1_1:75996320-75996339 Msa0044450:CDS 30.0%
AGAATACTTTCATGCCAAAA+AGG + chr1_1:75996456-75996475 None:intergenic 30.0%
!!! TTTTTTGAGGGAACAATGAA+TGG + chr1_1:75996606-75996625 None:intergenic 30.0%
ATAGAGATAGCTACAATGAA+TGG + chr1_1:75996640-75996659 None:intergenic 30.0%
GTAGCATACAGTATTACTTA+AGG + chr1_1:75996700-75996719 None:intergenic 30.0%
TCACACTTTGTGATAACAAT+TGG - chr1_1:75996780-75996799 Msa0044450:intron 30.0%
!!! TTGTGATAACAATTGGCTTT+TGG - chr1_1:75996787-75996806 Msa0044450:intron 30.0%
!!! AATATTGTTTTGATGGAGAC+AGG - chr1_1:75996818-75996837 Msa0044450:intron 30.0%
GCTAAAAATTCGAGAATTGT+GGG - chr1_1:75997463-75997482 Msa0044450:intron 30.0%
! ACGCATACATTTTATATGCT+CGG + chr1_1:75997502-75997521 None:intergenic 30.0%
TCTTTGCATAACAGAATCAA+AGG - chr1_1:75997737-75997756 Msa0044450:intron 30.0%
ATAACAGAATCAAAGGTCAT+TGG - chr1_1:75997744-75997763 Msa0044450:intron 30.0%
TAACAGAATCAAAGGTCATT+GGG - chr1_1:75997745-75997764 Msa0044450:intron 30.0%
CATAGATAATATGATAGCCA+AGG - chr1_1:75998077-75998096 Msa0044450:intron 30.0%
!!! ATAGCCAAGGTTTTAATTCA+TGG - chr1_1:75998090-75998109 Msa0044450:intron 30.0%
TCAAATGTTCTTGTCACAAA+TGG - chr1_1:75998541-75998560 Msa0044450:CDS 30.0%
! ATTGAAGATGAGAAAGTACA+TGG - chr1_1:75998980-75998999 Msa0044450:CDS 30.0%
ATAACCAAACATAAGACCTC+CGG + chr1_1:75994288-75994307 None:intergenic 35.0%
!!! TTAATTGTTTTAAGGCGGTG+TGG - chr1_1:75994580-75994599 Msa0044450:CDS 35.0%
GGAAAGAACTTCTTCAAGAA+GGG + chr1_1:75994617-75994636 None:intergenic 35.0%
TGGAAAGAACTTCTTCAAGA+AGG + chr1_1:75994618-75994637 None:intergenic 35.0%
CTTGAAGAAGTTCTTTCCAA+CGG - chr1_1:75994619-75994638 Msa0044450:CDS 35.0%
TACTGCAAATACGATAACCA+AGG - chr1_1:75994683-75994702 Msa0044450:CDS 35.0%
ACTGCAAATACGATAACCAA+GGG - chr1_1:75994684-75994703 Msa0044450:CDS 35.0%
CACTTCATCATTGTATTTGG+CGG - chr1_1:75994718-75994737 Msa0044450:CDS 35.0%
ACTTCATCATTGTATTTGGC+GGG - chr1_1:75994719-75994738 Msa0044450:CDS 35.0%
!! ATTGTATTTGGCGGGTTTAA+CGG - chr1_1:75994727-75994746 Msa0044450:CDS 35.0%
TCTTATACAACTCGAGTACT+AGG - chr1_1:75994764-75994783 Msa0044450:CDS 35.0%
!! ATTTGATTTTGCTCTCCCTT+AGG - chr1_1:75994929-75994948 Msa0044450:intron 35.0%
GACATGGTTAGATAACCTAA+GGG + chr1_1:75994947-75994966 None:intergenic 35.0%
! GATGTCTCCATGGATTTTAA+CGG - chr1_1:75995263-75995282 Msa0044450:CDS 35.0%
ATTGCATCCGTTAAAATCCA+TGG + chr1_1:75995273-75995292 None:intergenic 35.0%
AGATCCTTGTGTACATCATT+AGG - chr1_1:75995340-75995359 Msa0044450:CDS 35.0%
!!! GCCGAACTTTTAAAACCTTT+TGG - chr1_1:75996317-75996336 Msa0044450:CDS 35.0%
! ATTTGTTAGTTGCCACCAAA+AGG + chr1_1:75996335-75996354 None:intergenic 35.0%
GACTGATTAAGACTTTGTGT+GGG + chr1_1:75996414-75996433 None:intergenic 35.0%
AGACTGATTAAGACTTTGTG+TGG + chr1_1:75996415-75996434 None:intergenic 35.0%
ATGCCAAAAAGGTGGATATA+GGG + chr1_1:75996445-75996464 None:intergenic 35.0%
ATACTTTCATGCCAAAAAGG+TGG + chr1_1:75996453-75996472 None:intergenic 35.0%
AAATGAAATCATGCCCAAAG+TGG + chr1_1:75996518-75996537 None:intergenic 35.0%
! CTACAAACGATACACGATTT+TGG - chr1_1:75996716-75996735 Msa0044450:intron 35.0%
TTTCAGCTTGATATCACTCT+TGG - chr1_1:75996903-75996922 Msa0044450:intron 35.0%
! ATAAGGAACTTACTTGTTGG+TGG + chr1_1:75996958-75996977 None:intergenic 35.0%
ATAAAAGTCTAACACAGGGT+CGG - chr1_1:75997113-75997132 Msa0044450:intron 35.0%
!!! TTTTGGTGCCCCTAAAATAA+AGG - chr1_1:75997364-75997383 Msa0044450:intron 35.0%
GGCTAAAAATTCGAGAATTG+TGG - chr1_1:75997462-75997481 Msa0044450:intron 35.0%
AACAGAATCAAAGGTCATTG+GGG - chr1_1:75997746-75997765 Msa0044450:intron 35.0%
ACGTTCAATGAGACTATTTG+GGG + chr1_1:75997846-75997865 None:intergenic 35.0%
CACGTTCAATGAGACTATTT+GGG + chr1_1:75997847-75997866 None:intergenic 35.0%
! TCTACTAACTCTAAGAACTC+AGG + chr1_1:75997929-75997948 None:intergenic 35.0%
TGAGTTCTTAGAGTTAGTAG+AGG - chr1_1:75997928-75997947 Msa0044450:intron 35.0%
GCAACCATGAATTAAAACCT+TGG + chr1_1:75998097-75998116 None:intergenic 35.0%
CAGATATTTCAGCAATTCAC+TGG - chr1_1:75998344-75998363 Msa0044450:CDS 35.0%
AACTGGAGCATAGAACATTA+TGG + chr1_1:75998378-75998397 None:intergenic 35.0%
ATGGTGATAGCAATTGTACT+AGG - chr1_1:75998560-75998579 Msa0044450:CDS 35.0%
TGTACTAGGAATCAAAGTGA+AGG - chr1_1:75998574-75998593 Msa0044450:CDS 35.0%
! TTTTTGTGTCAGCATTTGCA+TGG - chr1_1:75998654-75998673 Msa0044450:intron 35.0%
TCTAGTGGAAATATCTCACT+TGG + chr1_1:75998707-75998726 None:intergenic 35.0%
! GGTATCTTCTTTTTCTTCTC+TGG - chr1_1:75998827-75998846 Msa0044450:intron 35.0%
! TCTTCTTTTTCTTCTCTGGT+TGG - chr1_1:75998831-75998850 Msa0044450:intron 35.0%
TCTGTGTCATCTCTTCAATA+GGG + chr1_1:75998910-75998929 None:intergenic 35.0%
GGTTATGATGTTGGAGTTTC+AGG - chr1_1:75994302-75994321 Msa0044450:CDS 40.0%
GACCGACCAAACACATATTA+AGG + chr1_1:75994387-75994406 None:intergenic 40.0%
AAGAACTTCTTCAAGAAGGG+TGG + chr1_1:75994614-75994633 None:intergenic 40.0%
AGTTGTATAAGACGCGAAGA+AGG + chr1_1:75994756-75994775 None:intergenic 40.0%
TGGAATTGGATTTGCAAACC+AGG - chr1_1:75994898-75994917 Msa0044450:intron 40.0%
CGACATGGTTAGATAACCTA+AGG + chr1_1:75994948-75994967 None:intergenic 40.0%
GTCTCCTAATGATGTACACA+AGG + chr1_1:75995347-75995366 None:intergenic 40.0%
! CAACCCTATATCCACCTTTT+TGG - chr1_1:75996439-75996458 Msa0044450:intron 40.0%
CATGCCAAAAAGGTGGATAT+AGG + chr1_1:75996446-75996465 None:intergenic 40.0%
TTATGAGTCATGACACTTGC+TGG - chr1_1:75996489-75996508 Msa0044450:intron 40.0%
! GCAATCTCTGAAAGGAAAAC+TGG + chr1_1:75996849-75996868 None:intergenic 40.0%
! TTGAAGGTGCAATCTCTGAA+AGG + chr1_1:75996857-75996876 None:intergenic 40.0%
ATTGCACCTTCAAGAATACG+TGG - chr1_1:75996864-75996883 Msa0044450:intron 40.0%
AATGCTCCACGTATTCTTGA+AGG + chr1_1:75996873-75996892 None:intergenic 40.0%
!!! TCCTAAGATTTTTGGTGTCC+TGG - chr1_1:75997136-75997155 Msa0044450:intron 40.0%
TCCAGGACACCAAAAATCTT+AGG + chr1_1:75997140-75997159 None:intergenic 40.0%
AGAGTTTCGTTGTTAGACCA+GGG + chr1_1:75997431-75997450 None:intergenic 40.0%
AAGAGTTTCGTTGTTAGACC+AGG + chr1_1:75997432-75997451 None:intergenic 40.0%
ACGAAACTCTTGCACACTAA+AGG - chr1_1:75997441-75997460 Msa0044450:intron 40.0%
CTAAAGTGAGGAGTAATGCT+GGG + chr1_1:75997802-75997821 None:intergenic 40.0%
CAGCATTACTCCTCACTTTA+GGG - chr1_1:75997801-75997820 Msa0044450:intron 40.0%
AGCATTACTCCTCACTTTAG+GGG - chr1_1:75997802-75997821 Msa0044450:intron 40.0%
TTTAGGGGCTTACTTAGTAG+TGG - chr1_1:75997817-75997836 Msa0044450:intron 40.0%
CCACGTTCAATGAGACTATT+TGG + chr1_1:75997848-75997867 None:intergenic 40.0%
CCAAATAGTCTCATTGAACG+TGG - chr1_1:75997845-75997864 Msa0044450:intron 40.0%
! TGGAAATGACAAGTTGAGGT+CGG + chr1_1:75998012-75998031 None:intergenic 40.0%
GCAATGGAAATGACAAGTTG+AGG + chr1_1:75998016-75998035 None:intergenic 40.0%
! TGTCATTTCCATTGCCCTAA+TGG - chr1_1:75998021-75998040 Msa0044450:intron 40.0%
AGTACAAACCATTAGGGCAA+TGG + chr1_1:75998032-75998051 None:intergenic 40.0%
TTTCGCTATTGCAATTAGGG+CGG + chr1_1:75998181-75998200 None:intergenic 40.0%
TCCAGTTCTGTTCAACACAT+TGG - chr1_1:75998391-75998410 Msa0044450:CDS 40.0%
CCAGTTCTGTTCAACACATT+GGG - chr1_1:75998392-75998411 Msa0044450:CDS 40.0%
CTTTACTCTGCTGTGATTAC+TGG - chr1_1:75998434-75998453 Msa0044450:CDS 40.0%
! ATTCTGAGGAACTCTCGAAA+GGG - chr1_1:75998600-75998619 Msa0044450:CDS 40.0%
TAGGGACATTCTTTGTCTCA+GGG + chr1_1:75998892-75998911 None:intergenic 40.0%
ATAGGGACATTCTTTGTCTC+AGG + chr1_1:75998893-75998912 None:intergenic 40.0%
CTCTGTGTCATCTCTTCAAT+AGG + chr1_1:75998911-75998930 None:intergenic 40.0%
! GAAGATGAGAAAGTACATGG+TGG - chr1_1:75998983-75999002 Msa0044450:CDS 40.0%
AGACAAGATCATTTCTGCCA+GGG + chr1_1:75999015-75999034 None:intergenic 40.0%
AAGTGAATAGCTGCAACCCT+TGG + chr1_1:75994703-75994722 None:intergenic 45.0%
CAACTCGAGTACTAGGAAGA+AGG - chr1_1:75994771-75994790 Msa0044450:CDS 45.0%
AACCTTCTCATGCTCATCGT+TGG - chr1_1:75994857-75994876 Msa0044450:CDS 45.0%
TACCAACGATGAGCATGAGA+AGG + chr1_1:75994862-75994881 None:intergenic 45.0%
TTCTCATGCTCATCGTTGGT+AGG - chr1_1:75994861-75994880 Msa0044450:CDS 45.0%
TCTCATGCTCATCGTTGGTA+GGG - chr1_1:75994862-75994881 Msa0044450:CDS 45.0%
! ATCGTTGGTAGGGTCTTACT+TGG - chr1_1:75994872-75994891 Msa0044450:CDS 45.0%
GTCTTACTTGGCTGTGGAAT+TGG - chr1_1:75994884-75994903 Msa0044450:intron 45.0%
GTACTATTGCGATGTCTCCA+TGG - chr1_1:75995253-75995272 Msa0044450:CDS 45.0%
AGAACCACGCGTTCACTAAA+AGG + chr1_1:75996105-75996124 None:intergenic 45.0%
! CTCTGAAAGGAAAACTGGCA+CGG + chr1_1:75996844-75996863 None:intergenic 45.0%
!! TGTTGGTGGCATAGTTGACA+AGG + chr1_1:75996944-75996963 None:intergenic 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG - chr1_1:75997128-75997147 Msa0044450:intron 45.0%
!!! CCAGGGCACCTTTATTTTAG+GGG + chr1_1:75997375-75997394 None:intergenic 45.0%
!!! CCCAGGGCACCTTTATTTTA+GGG + chr1_1:75997376-75997395 None:intergenic 45.0%
!! CCCTAAAATAAAGGTGCCCT+GGG - chr1_1:75997373-75997392 Msa0044450:intron 45.0%
GAGTTTCGTTGTTAGACCAG+GGG + chr1_1:75997430-75997449 None:intergenic 45.0%
GAATCAAAGGTCATTGGGGT+TGG - chr1_1:75997750-75997769 Msa0044450:intron 45.0%
!! TTGGAGGATATCTCTGGGAT+TGG - chr1_1:75997769-75997788 Msa0044450:intron 45.0%
!! TGGAGGATATCTCTGGGATT+GGG - chr1_1:75997770-75997789 Msa0044450:intron 45.0%
CCTAAAGTGAGGAGTAATGC+TGG + chr1_1:75997803-75997822 None:intergenic 45.0%
CCAGCATTACTCCTCACTTT+AGG - chr1_1:75997800-75997819 Msa0044450:intron 45.0%
CTAAGTAAGCCCCTAAAGTG+AGG + chr1_1:75997814-75997833 None:intergenic 45.0%
TCTCATTGAACGTGGTCACT+TGG - chr1_1:75997853-75997872 Msa0044450:intron 45.0%
!! GCTGTTCTGAGAAAGATTCG+TGG - chr1_1:75997887-75997906 Msa0044450:intron 45.0%
TCTGAGAAAGATTCGTGGCA+CGG - chr1_1:75997892-75997911 Msa0044450:intron 45.0%
CGCTTGAGGAGATTTCTGAA+CGG + chr1_1:75997983-75998002 None:intergenic 45.0%
AGGGTCTGCAATTGCAATTG+TGG + chr1_1:75998226-75998245 None:intergenic 45.0%
CCCAATGTGTTGAACAGAAC+TGG + chr1_1:75998395-75998414 None:intergenic 45.0%
CGAAAGCTATTACTCGAAGC+TGG - chr1_1:75998515-75998534 Msa0044450:CDS 45.0%
CAAAGTGAAGGACCATTCTG+AGG - chr1_1:75998586-75998605 Msa0044450:CDS 45.0%
CTTTCGAGAGTTCCTCAGAA+TGG + chr1_1:75998601-75998620 None:intergenic 45.0%
! CATTCTGAGGAACTCTCGAA+AGG - chr1_1:75998599-75998618 Msa0044450:CDS 45.0%
TGCAGCTCTTGTAGTTGTGA+TGG - chr1_1:75998625-75998644 Msa0044450:CDS 45.0%
TGTCAGCATTTGCATGGTCA+TGG - chr1_1:75998660-75998679 Msa0044450:intron 45.0%
GTCAGCATTTGCATGGTCAT+GGG - chr1_1:75998661-75998680 Msa0044450:intron 45.0%
TCAGCATTTGCATGGTCATG+GGG - chr1_1:75998662-75998681 Msa0044450:intron 45.0%
CTTGGAATAAGCCAAGCAAG+TGG + chr1_1:75998689-75998708 None:intergenic 45.0%
CATTCTTTGTCTCAGGGACA+AGG + chr1_1:75998886-75998905 None:intergenic 45.0%
AAGAGATGACACAGAGAGTG+TGG - chr1_1:75998915-75998934 Msa0044450:intron 45.0%
!!! TGTGGAAGCAGCATTGGTTT+TGG - chr1_1:75998933-75998952 Msa0044450:CDS 45.0%
!!! AGCAGCATTGGTTTTGGAAG+AGG - chr1_1:75998939-75998958 Msa0044450:CDS 45.0%
GACAAGATCATTTCTGCCAG+GGG + chr1_1:75999014-75999033 None:intergenic 45.0%
GAGACAAGATCATTTCTGCC+AGG + chr1_1:75999016-75999035 None:intergenic 45.0%
!! TTGTAAAAATAAATAAATAA+AGG - chr1_1:75996378-75996397 Msa0044450:CDS 5.0%
!! CAAAAAAAAATAAATTAAAA+GGG + chr1_1:75997181-75997200 None:intergenic 5.0%
CGGCAACGACAGAGAATTTG+AGG - chr1_1:75994217-75994236 Msa0044450:CDS 50.0%
TCATGCATAATGGCTGCCAC+CGG - chr1_1:75994266-75994285 Msa0044450:CDS 50.0%
ACCAAACATAAGACCTCCGG+TGG + chr1_1:75994285-75994304 None:intergenic 50.0%
AACGGTCTTGAGACAGACGA+CGG - chr1_1:75994637-75994656 Msa0044450:CDS 50.0%
AGACAGACGACGGAATCAGA+TGG - chr1_1:75994647-75994666 Msa0044450:CDS 50.0%
GACAGACGACGGAATCAGAT+GGG - chr1_1:75994648-75994667 Msa0044450:CDS 50.0%
AGGCTCACAATGTTGATCGC+TGG - chr1_1:75994791-75994810 Msa0044450:CDS 50.0%
! GCTGGCTTCTTCTTCATAGC+TGG - chr1_1:75994809-75994828 Msa0044450:CDS 50.0%
! CTCACCTTTTAGTGAACGCG+TGG - chr1_1:75996098-75996117 Msa0044450:intron 50.0%
! ACACTTGCTGGTGACCACTT+TGG - chr1_1:75996501-75996520 Msa0044450:intron 50.0%
! CACTTGCTGGTGACCACTTT+GGG - chr1_1:75996502-75996521 Msa0044450:intron 50.0%
!! CCCCTAAAATAAAGGTGCCC+TGG - chr1_1:75997372-75997391 Msa0044450:intron 50.0%
!!! GCCCAGGGCACCTTTATTTT+AGG + chr1_1:75997377-75997396 None:intergenic 50.0%
TTTCGTTGTTAGACCAGGGG+TGG + chr1_1:75997427-75997446 None:intergenic 50.0%
TCAAAGGTCATTGGGGTTGG+AGG - chr1_1:75997753-75997772 Msa0044450:intron 50.0%
TTGGGGTTGGAGGATATCTC+TGG - chr1_1:75997763-75997782 Msa0044450:intron 50.0%
TGGGGTTGGAGGATATCTCT+GGG - chr1_1:75997764-75997783 Msa0044450:intron 50.0%
!! AGGATATCTCTGGGATTGGG+AGG - chr1_1:75997773-75997792 Msa0044450:intron 50.0%
GAACGTGGTCACTTGGACAA+AGG - chr1_1:75997860-75997879 Msa0044450:intron 50.0%
! GGCAAGTCGTGTTGCTAAAG+AGG - chr1_1:75997949-75997968 Msa0044450:intron 50.0%
CACTAGAGACTCGTTCTGCA+GGG - chr1_1:75998720-75998739 Msa0044450:intron 50.0%
GTGCAATGACAGCAGTGAAG+AGG + chr1_1:75998772-75998791 None:intergenic 50.0%
! AGAGAGTGTGGAAGCAGCAT+TGG - chr1_1:75998927-75998946 Msa0044450:CDS 50.0%
! GTACATGGTGGAAATTCCCC+TGG - chr1_1:75998995-75999014 Msa0044450:CDS 50.0%
! GCCACCGGAGGTCTTATGTT+TGG - chr1_1:75994281-75994300 Msa0044450:CDS 55.0%
GTCGTCTGTCTCAAGACCGT+TGG + chr1_1:75994638-75994657 None:intergenic 55.0%
GGTAGGGTCTTACTTGGCTG+TGG - chr1_1:75994878-75994897 Msa0044450:intron 55.0%
GAGGTCGGTTATTGCGCTTG+AGG + chr1_1:75997997-75998016 None:intergenic 55.0%
CCTGCAGAACGAGTCTCTAG+TGG + chr1_1:75998722-75998741 None:intergenic 55.0%
CCACTAGAGACTCGTTCTGC+AGG - chr1_1:75998719-75998738 Msa0044450:intron 55.0%
! ATGACGGGAGGAGGCTTCAG+CGG - chr1_1:75994194-75994213 Msa0044450:CDS 60.0%
TGCATAATGGCTGCCACCGG+AGG - chr1_1:75994269-75994288 Msa0044450:CDS 60.0%
GGTCATGGGGTCCACTTGCT+TGG - chr1_1:75998675-75998694 Msa0044450:intron 60.0%
TAGACCAGGGGTGGCCCTGA+GGG + chr1_1:75997418-75997437 None:intergenic 65.0%
TTAGACCAGGGGTGGCCCTG+AGG + chr1_1:75997419-75997438 None:intergenic 65.0%
ACGGGAGGAGGCTTCAGCGG+CGG - chr1_1:75994197-75994216 Msa0044450:CDS 70.0%
CTGAGGGTGGACGGAAGGGG+CGG + chr1_1:75997402-75997421 None:intergenic 70.0%
GCCCCTTCCGTCCACCCTCA+GGG - chr1_1:75997401-75997420 Msa0044450:intron 70.0%
GCCCTGAGGGTGGACGGAAG+GGG + chr1_1:75997405-75997424 None:intergenic 70.0%
GGCCCTGAGGGTGGACGGAA+GGG + chr1_1:75997406-75997425 None:intergenic 70.0%
TGGCCCTGAGGGTGGACGGA+AGG + chr1_1:75997407-75997426 None:intergenic 70.0%
ACGGAAGGGGCGGCAGCCCA+GGG + chr1_1:75997392-75997411 None:intergenic 75.0%
CGCCCCTTCCGTCCACCCTC+AGG - chr1_1:75997400-75997419 Msa0044450:intron 75.0%
GGGGTGGCCCTGAGGGTGGA+CGG + chr1_1:75997411-75997430 None:intergenic 75.0%
TCCACCCTCAGGGCCACCCC+TGG - chr1_1:75997411-75997430 Msa0044450:intron 75.0%
ACCAGGGGTGGCCCTGAGGG+TGG + chr1_1:75997415-75997434 None:intergenic 75.0%
! GACGGAAGGGGCGGCAGCCC+AGG + chr1_1:75997393-75997412 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75994194 75999045 75994194 ID=Msa0044450;Name=Msa0044450
chr1_1 mRNA 75994194 75999045 75994194 ID=Msa0044450-mRNA-1;Parent=Msa0044450;Name=Msa0044450-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|5|0|523
chr1_1 exon 75998916 75999045 75998916 ID=Msa0044450-mRNA-1:exon:25755;Parent=Msa0044450-mRNA-1
chr1_1 exon 75998320 75998645 75998320 ID=Msa0044450-mRNA-1:exon:25754;Parent=Msa0044450-mRNA-1
chr1_1 exon 75996275 75996399 75996275 ID=Msa0044450-mRNA-1:exon:25753;Parent=Msa0044450-mRNA-1
chr1_1 exon 75995197 75995488 75995197 ID=Msa0044450-mRNA-1:exon:25752;Parent=Msa0044450-mRNA-1
chr1_1 exon 75994194 75994892 75994194 ID=Msa0044450-mRNA-1:exon:25751;Parent=Msa0044450-mRNA-1
chr1_1 CDS 75998916 75999045 75998916 ID=Msa0044450-mRNA-1:cds;Parent=Msa0044450-mRNA-1
chr1_1 CDS 75998320 75998645 75998320 ID=Msa0044450-mRNA-1:cds;Parent=Msa0044450-mRNA-1
chr1_1 CDS 75996275 75996399 75996275 ID=Msa0044450-mRNA-1:cds;Parent=Msa0044450-mRNA-1
chr1_1 CDS 75995197 75995488 75995197 ID=Msa0044450-mRNA-1:cds;Parent=Msa0044450-mRNA-1
chr1_1 CDS 75994194 75994892 75994194 ID=Msa0044450-mRNA-1:cds;Parent=Msa0044450-mRNA-1
Gene Sequence

>Msa0044450

ATGACGGGAGGAGGCTTCAGCGGCGGCAACGACAGAGAATTTGAGGCAAAGATAATTCCTATCATTATCATTTCATGCATAATGGCTGCCACCGGAGGTCTTATGTTTGGTTATGATGTTGGAGTTTCAGGCGGTGTGGCATCGATGCCACCCTTCTTGAAGAAGTTCTTTCCAACGGTCTTGAGACAGACGACGGAATCAGATGGGTCAGAAAGCAACTACTGCAAATACGATAACCAAGGGTTGCAGCTATTCACTTCATCATTGTATTTGGCGGGTTTAACGGTAACCTTCTTCGCGTCTTATACAACTCGAGTACTAGGAAGAAGGCTCACAATGTTGATCGCTGGCTTCTTCTTCATAGCTGGAGTTACTCTTAATGCATCTGCTCAAAACCTTCTCATGCTCATCGTTGGTAGGGTCTTACTTGGCTGTGGAATTGGATTTGCAAACCAGGCCGTGCCAGTTTTCCTTTCAGAGATTGCACCTTCAAGAATACGTGGAGCATTGAATATTTTGTTTCAGCTTGATATCACTCTTGGCATTCTATTTGCTAACCTTGTCAACTATGCCACCAACAAAATCAAAGGTCATTGGGGTTGGAGGATATCTCTGGGATTGGGAGGTATCCCAGCATTACTCCTCACTTTAGGGGCTTACTTAGTAGTGGACACCCCAAATAGTCTCATTGAACGTGGTCACTTGGACAAAGGAAAAGCTGTTCTGAGAAAGATTCGTGGCACGGACAACATTGAACCTGAGTTCTTAGAGTTAGTAGAGGCAAGTCGTGTTGCTAAAGAGGTGAAACATCCGTTCAGAAATCTCCTCAAGCGCAATAACCGACCTCAACTTGTCATTTCCATTGCCCTAATGATATTTCAGCAATTCACTGGCATCAATGCCATAATGTTCTATGCTCCAGTTCTGTTCAACACATTGGGATTCAAGAATGATGCTGCACTTTACTCTGCTGTGATTACTGGTGCTATCAATGTCGTCTCAACGATAGTCTCAATATATTCGGTTGATAAACTGGGACGTCGAAAGCTATTACTCGAAGCTGGTGTTCAAATGTTCTTGTCACAAATGGTGATAGCAATTGTACTAGGAATCAAAGTGAAGGACCATTCTGAGGAACTCTCGAAAGGGTATGCAGCTCTTGTAGTTGTGATGGTGTGTATTTTTGTGTCAGCATTTGCATGGTCATGGGGTCCACTTGCTTGGCTTATTCCAAGTGAGATATTTCCACTAGAGACTCGTTCTGCAGGGCAAAGTGTAACAGTTTGTGTCAACTTCCTCTTCACTGCTGTCATTGCACAAGCTTTCCTTTCAATGCTTTGTTATTTCAAGTTTGGTATCTTCTTTTTCTTCTCTGGTTGGATCTTGTTCATGTCAACTTTTGTCTTTTTCCTTGTCCCTGAGACAAAGAATGTCCCTATTGAAGAGATGACACAGAGAGTGTGGAAGCAGCATTGGTTTTGGAAGAGGTTTGTTGAAAGTGATTATATTGAAGATGAGAAAGTACATGGTGGAAATTCCCCTGGCAGAAATGATCTTGTCTCTCAGTTGTAA
Protein sequence

>Msa0044450

MTGGGFSGGNDREFEAKIIPIIIISCIMAATGGLMFGYDVGVSGGVASMPPFLKKFFPTVLRQTTESDGSESNYCKYDNQGLQLFTSSLYLAGLTVTFFASYTTRVLGRRLTMLIAGFFFIAGVTLNASAQNLLMLIVGRVLLGCGIGFANQAVPVFLSEIAPSRIRGALNILFQLDITLGILFANLVNYATNKIKGHWGWRISLGLGGIPALLLTLGAYLVVDTPNSLIERGHLDKGKAVLRKIRGTDNIEPEFLELVEASRVAKEVKHPFRNLLKRNNRPQLVISIALMIFQQFTGINAIMFYAPVLFNTLGFKNDAALYSAVITGAINVVSTIVSIYSVDKLGRRKLLLEAGVQMFLSQMVIAIVLGIKVKDHSEELSKGYAALVVVMVCIFVSAFAWSWGPLAWLIPSEIFPLETRSAGQSVTVCVNFLFTAVIAQAFLSMLCYFKFGIFFFFSGWILFMSTFVFFLVPETKNVPIEEMTQRVWKQHWFWKRFVESDYIEDEKVHGGNSPGRNDLVSQL*