Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139770 | AWW91873.1 | 92.822 | 613 | 0 | 1 | 1 | 569 | 271 | 883 | 0.0 | 1152 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139770 | sp|Q8HVY5|RPOB_SOYBN | 86.134 | 613 | 41 | 1 | 1 | 569 | 266 | 878 | 0.0 | 1078 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139770 | A0A2Z4KH34 | 92.822 | 613 | 0 | 1 | 1 | 569 | 271 | 883 | 0.0 | 1152 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0139770 | Msa0139790 | 0.806313 | 8.738311e-50 | -8.615850e-47 |
Msa0139770 | Msa0139830 | 0.882400 | 1.075743e-70 | -8.615850e-47 |
Msa0139770 | Msa0268820 | 0.804940 | 1.697214e-49 | -8.615850e-47 |
Msa0139770 | Msa0268990 | 0.803457 | 3.454808e-49 | -8.615850e-47 |
Msa0139770 | Msa0269030 | 0.811807 | 5.820575e-51 | -8.615850e-47 |
Msa0139770 | Msa0582500 | 0.806100 | 9.692990e-50 | -8.615850e-47 |
Msa0139770 | Msa0582670 | 0.808623 | 2.827898e-50 | -8.615850e-47 |
Msa0139770 | Msa0582680 | 0.813897 | 2.027935e-51 | -8.615850e-47 |
Msa0139770 | Msa0582790 | 0.807198 | 5.683342e-50 | -8.615850e-47 |
Msa0139770 | Msa0931060 | 0.835066 | 2.083271e-56 | -8.615850e-47 |
Msa0139770 | Msa0931120 | 0.811759 | 5.960995e-51 | -8.615850e-47 |
Msa0139770 | Msa0931250 | 0.811222 | 7.799572e-51 | -8.615850e-47 |
Msa0139770 | Msa1086130 | 0.857707 | 1.359123e-62 | -8.615850e-47 |
Msa0139770 | Msa1086220 | 0.823291 | 1.499487e-53 | -8.615850e-47 |
Msa0139770 | Msa1143110 | 0.812267 | 4.619166e-51 | -8.615850e-47 |
Msa0139770 | Msa1305100 | 0.804778 | 1.834469e-49 | -8.615850e-47 |
Msa0139770 | Msa1305150 | 0.855564 | 5.798070e-62 | -8.615850e-47 |
Msa0139770 | Msa1354940 | 0.821831 | 3.275998e-53 | -8.615850e-47 |
Msa0139770 | Msa1355110 | 0.852007 | 6.123339e-61 | -8.615850e-47 |
Msa0139770 | Msa1380630 | 0.839004 | 2.053861e-57 | -8.615850e-47 |
Msa0139770 | Msa1380670 | 0.819796 | 9.623402e-53 | -8.615850e-47 |
Msa0139770 | Msa1380700 | 0.815736 | 7.933208e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139770 | MtrunA17_Chr4g0016641 | 92.170 | 613 | 4 | 1 | 1 | 569 | 271 | 883 | 0.0 | 1142 |
Msa0139770 | MtrunA17_CPg0493041 | 92.170 | 613 | 4 | 1 | 1 | 569 | 271 | 883 | 0.0 | 1142 |
Msa0139770 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 31 | 398 | 1 | 294 | 0.0 | 562 |
Msa0139770 | MtrunA17_Chr1g0159041 | 67.905 | 377 | 41 | 5 | 201 | 569 | 1 | 305 | 4.46e-166 | 475 |
Msa0139770 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 4 | 108 | 12 | 116 | 5.13e-63 | 202 |
Msa0139770 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 355 | 432 | 1 | 78 | 9.13e-49 | 164 |
Msa0139770 | MtrunA17_Chr3g0136911 | 26.838 | 272 | 172 | 7 | 317 | 563 | 724 | 993 | 5.76e-17 | 85.1 |
Msa0139770 | MtrunA17_Chr1g0155911 | 25.116 | 215 | 127 | 4 | 383 | 563 | 782 | 996 | 6.18e-17 | 84.7 |
Msa0139770 | MtrunA17_Chr8g0375171 | 26.471 | 272 | 173 | 7 | 317 | 563 | 722 | 991 | 1.49e-16 | 83.6 |
Msa0139770 | MtrunA17_Chr8g0345421 | 25.926 | 216 | 127 | 3 | 383 | 566 | 728 | 942 | 2.04e-15 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139770 | ATCG00190.1 | 82.927 | 615 | 59 | 2 | 1 | 569 | 266 | 880 | 0.0 | 1044 |
Msa0139770 | AT4G21710.1 | 25.581 | 215 | 126 | 4 | 383 | 563 | 779 | 993 | 6.42e-16 | 82.0 |
Msa0139770 | AT3G23780.1 | 26.396 | 197 | 124 | 2 | 387 | 562 | 769 | 965 | 1.23e-14 | 78.2 |
Msa0139770 | AT3G23780.2 | 26.396 | 197 | 124 | 2 | 387 | 562 | 769 | 965 | 1.23e-14 | 78.2 |
Msa0139770 | AT3G18090.2 | 25.888 | 197 | 125 | 2 | 387 | 562 | 651 | 847 | 4.79e-14 | 75.9 |
Msa0139770 | AT3G18090.1 | 25.888 | 197 | 125 | 2 | 387 | 562 | 651 | 847 | 5.06e-14 | 75.9 |
Msa0139770 | AT3G18090.3 | 25.888 | 197 | 125 | 2 | 387 | 562 | 651 | 847 | 6.52e-14 | 75.5 |
Find 127 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 1_3:-73597458 | Msa0139770:CDS |
TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 1_3:+73596483 | None:intergenic |
CATTTGATTGGAATGAAATT+TGG | 0.153768 | 1_3:-73597751 | Msa0139770:CDS |
GAACGTTGATATCTAATTAA+TGG | 0.244746 | 1_3:+73596806 | None:intergenic |
GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 1_3:-73597340 | Msa0139770:CDS |
ACGAGCTATACTTGGGATTC+AGG | 0.269809 | 1_3:-73596348 | Msa0139770:intron |
AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 1_3:-73597170 | Msa0139770:CDS |
GATCTATTACAAGATCAATT+TGG | 0.270369 | 1_3:-73597670 | Msa0139770:CDS |
GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 1_3:+73597547 | None:intergenic |
CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 1_3:+73597508 | None:intergenic |
GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 1_3:+73596108 | None:intergenic |
ATAATTCGAGGAACTATATC+TGG | 0.305120 | 1_3:-73597622 | Msa0139770:CDS |
GCATCATTATGCTCGATAAA+AGG | 0.305503 | 1_3:+73597031 | None:intergenic |
ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 1_3:+73596066 | None:intergenic |
GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 1_3:-73597457 | Msa0139770:CDS |
CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 1_3:-73596920 | Msa0139770:CDS |
TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 1_3:-73596693 | Msa0139770:CDS |
CGCATTTACCTTTATGAACC+TGG | 0.329782 | 1_3:+73596753 | None:intergenic |
AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 1_3:+73596883 | None:intergenic |
AATGAATGTAGGACAGATAT+TGG | 0.340082 | 1_3:-73596046 | Msa0139770:CDS |
TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 1_3:-73597305 | Msa0139770:CDS |
ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 1_3:-73596080 | Msa0139770:CDS |
GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 1_3:-73596976 | Msa0139770:CDS |
CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 1_3:-73596443 | Msa0139770:CDS |
CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 1_3:+73597478 | None:intergenic |
CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 1_3:-73596956 | Msa0139770:CDS |
AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 1_3:+73596910 | None:intergenic |
TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 1_3:+73597038 | None:intergenic |
TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 1_3:-73597439 | Msa0139770:CDS |
GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 1_3:-73596024 | Msa0139770:CDS |
ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | 1_3:-73597763 | Msa0139770:CDS |
GATATGGTCTTCAACCCATT+AGG | 0.395616 | 1_3:-73596081 | Msa0139770:CDS |
GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 1_3:-73596692 | Msa0139770:CDS |
AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 1_3:-73596097 | Msa0139770:CDS |
ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 1_3:+73597358 | None:intergenic |
AGATTATTACGAGCTATACT+TGG | 0.409704 | 1_3:-73596356 | Msa0139770:CDS |
TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 1_3:-73597332 | Msa0139770:CDS |
TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 1_3:-73597110 | Msa0139770:CDS |
GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 1_3:-73596950 | Msa0139770:CDS |
TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 1_3:-73597306 | Msa0139770:CDS |
TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 1_3:-73597440 | Msa0139770:CDS |
GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 1_3:-73596454 | Msa0139770:CDS |
GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 1_3:+73596484 | None:intergenic |
AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 1_3:+73597483 | None:intergenic |
GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 1_3:-73596165 | Msa0139770:CDS |
GTATATCAATGTTCAGTCTT+CGG | 0.430453 | 1_3:+73597824 | None:intergenic |
CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 1_3:-73597478 | Msa0139770:CDS |
AAGTAGAGATGAATACTATA+TGG | 0.431841 | 1_3:-73597212 | Msa0139770:CDS |
TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 1_3:+73596067 | None:intergenic |
GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 1_3:+73596395 | None:intergenic |
GATATCCATCCTAGTCACTA+TGG | 0.449002 | 1_3:-73597391 | Msa0139770:CDS |
ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 1_3:+73596164 | None:intergenic |
AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 1_3:-73597451 | Msa0139770:CDS |
GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 1_3:+73596365 | None:intergenic |
GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 1_3:-73596408 | Msa0139770:CDS |
GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 1_3:+73597509 | None:intergenic |
ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 1_3:-73597665 | Msa0139770:CDS |
AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 1_3:-73597117 | Msa0139770:CDS |
CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 1_3:+73596893 | None:intergenic |
CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 1_3:-73597634 | Msa0139770:CDS |
AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 1_3:-73596453 | Msa0139770:CDS |
ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | 1_3:-73597745 | Msa0139770:CDS |
TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 1_3:-73597313 | Msa0139770:CDS |
GATTGGAATGAAATTTGGAA+TGG | 0.498930 | 1_3:-73597746 | Msa0139770:CDS |
GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 1_3:-73596945 | Msa0139770:CDS |
CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 1_3:+73596918 | None:intergenic |
TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 1_3:-73596615 | Msa0139770:CDS |
GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 1_3:+73597433 | None:intergenic |
GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 1_3:-73596114 | Msa0139770:CDS |
TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 1_3:-73596661 | Msa0139770:CDS |
CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 1_3:-73596198 | Msa0139770:CDS |
ATATAGTATTCATCTCTACT+TGG | 0.523407 | 1_3:+73597214 | None:intergenic |
AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 1_3:-73596183 | Msa0139770:CDS |
GCATTTACCTTTATGAACCT+GGG | 0.530323 | 1_3:+73596754 | None:intergenic |
GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 1_3:-73596710 | Msa0139770:CDS |
GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 1_3:-73596174 | Msa0139770:CDS |
GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 1_3:+73596087 | None:intergenic |
AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 1_3:+73597133 | None:intergenic |
CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 1_3:+73597122 | None:intergenic |
TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 1_3:+73596373 | None:intergenic |
TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 1_3:+73596376 | None:intergenic |
TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 1_3:+73596892 | None:intergenic |
AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 1_3:-73597116 | Msa0139770:CDS |
CAGATATTGGAATGTTCACT+CGG | 0.551609 | 1_3:-73596033 | Msa0139770:CDS |
TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 1_3:+73596528 | None:intergenic |
GAATACTATATGGTAGCGAC+GGG | 0.553560 | 1_3:-73597202 | Msa0139770:CDS |
GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 1_3:-73596707 | Msa0139770:CDS |
CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 1_3:-73597477 | Msa0139770:CDS |
GATTATTACGAGCTATACTT+GGG | 0.558504 | 1_3:-73596355 | Msa0139770:CDS |
ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 1_3:+73597678 | None:intergenic |
GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 1_3:+73597577 | None:intergenic |
AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 1_3:-73596023 | Msa0139770:CDS |
GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 1_3:-73596384 | Msa0139770:CDS |
TGAATACTATATGGTAGCGA+CGG | 0.571395 | 1_3:-73597203 | Msa0139770:CDS |
TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 1_3:+73597348 | None:intergenic |
CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 1_3:+73597382 | None:intergenic |
AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 1_3:-73596187 | Msa0139770:CDS |
CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 1_3:-73596545 | Msa0139770:CDS |
CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 1_3:+73596053 | None:intergenic |
AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 1_3:+73596497 | None:intergenic |
TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 1_3:-73597361 | Msa0139770:CDS |
ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 1_3:+73597039 | None:intergenic |
TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 1_3:-73596442 | Msa0139770:CDS |
TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 1_3:+73596644 | None:intergenic |
ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 1_3:-73596660 | Msa0139770:CDS |
AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 1_3:-73596182 | Msa0139770:CDS |
CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 1_3:-73597304 | Msa0139770:CDS |
GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 1_3:-73596656 | Msa0139770:CDS |
TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 1_3:+73596054 | None:intergenic |
GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 1_3:-73597318 | Msa0139770:CDS |
AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 1_3:-73596933 | Msa0139770:CDS |
GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 1_3:+73597571 | None:intergenic |
AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 1_3:+73597315 | None:intergenic |
CATTTGTCCAATTGACACCT+CGG | 0.622149 | 1_3:-73597365 | Msa0139770:CDS |
GTACCCTCACGAATGAATGT+AGG | 0.622385 | 1_3:-73596057 | Msa0139770:CDS |
TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 1_3:+73596086 | None:intergenic |
TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 1_3:+73597386 | None:intergenic |
ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 1_3:-73597303 | Msa0139770:CDS |
TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 1_3:-73597448 | Msa0139770:CDS |
TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 1_3:-73597438 | Msa0139770:CDS |
GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 1_3:-73596441 | Msa0139770:CDS |
ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 1_3:-73597349 | Msa0139770:CDS |
TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 1_3:-73596079 | Msa0139770:CDS |
CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 1_3:-73596893 | Msa0139770:CDS |
GCGAGATATATTGACAGCTG+CGG | 0.702124 | 1_3:-73597776 | Msa0139770:CDS |
GCAGCTGTCAATATATCTCG+CGG | 0.702925 | 1_3:+73597778 | None:intergenic |
ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 1_3:-73597167 | Msa0139770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAACAAAAATGTATTGTTCT+CGG | + | chr1_3:73596027-73596046 | None:intergenic | 20.0% |
!!! | AAGATCATTTTATTTGGAAA+TGG | - | chr1_3:73596980-73596999 | Msa0139770:CDS | 20.0% |
!!! | AGATCATTTTATTTGGAAAT+GGG | - | chr1_3:73596981-73597000 | Msa0139770:CDS | 20.0% |
!!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr1_3:73597307-73597326 | None:intergenic | 20.0% |
!!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr1_3:73597354-73597373 | None:intergenic | 20.0% |
!! | ATATATATATGAATCGTTTC+TGG | + | chr1_3:73597603-73597622 | None:intergenic | 20.0% |
!! | TAACAAAAATGTATTGTTCT+CGG | + | chr1_3:73596027-73596046 | None:intergenic | 20.0% |
!!! | AAGATCATTTTATTTGGAAA+TGG | - | chr1_3:73596980-73596999 | Msa0139770:CDS | 20.0% |
!!! | AGATCATTTTATTTGGAAAT+GGG | - | chr1_3:73596981-73597000 | Msa0139770:CDS | 20.0% |
!!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr1_3:73597307-73597326 | None:intergenic | 20.0% |
!!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr1_3:73597354-73597373 | None:intergenic | 20.0% |
!! | ATATATATATGAATCGTTTC+TGG | + | chr1_3:73597603-73597622 | None:intergenic | 20.0% |
! | AACAAAAATGTATTGTTCTC+GGG | + | chr1_3:73596026-73596045 | None:intergenic | 25.0% |
! | CATTTGATTGGAATGAAATT+TGG | - | chr1_3:73596074-73596093 | Msa0139770:CDS | 25.0% |
!! | ATTGGAATGAAATTTGGAAT+GGG | - | chr1_3:73596080-73596099 | Msa0139770:CDS | 25.0% |
! | GATCTATTACAAGATCAATT+TGG | - | chr1_3:73596155-73596174 | Msa0139770:CDS | 25.0% |
! | ATTACAAGATCAATTTGGAT+TGG | - | chr1_3:73596160-73596179 | Msa0139770:CDS | 25.0% |
! | CGTTTAGAAAATATAATTCG+AGG | - | chr1_3:73596191-73596210 | Msa0139770:CDS | 25.0% |
!! | GATCTAAAACTTGAGATAAT+GGG | + | chr1_3:73596319-73596338 | None:intergenic | 25.0% |
! | CTCTCAGAAATTTCAAAAAA+TGG | + | chr1_3:73596560-73596579 | None:intergenic | 25.0% |
! | ATATAGTATTCATCTCTACT+TGG | + | chr1_3:73596614-73596633 | None:intergenic | 25.0% |
! | AAGTAGAGATGAATACTATA+TGG | - | chr1_3:73596613-73596632 | Msa0139770:CDS | 25.0% |
! | CAATAGTTAGAAATTCTTGA+CGG | + | chr1_3:73596706-73596725 | None:intergenic | 25.0% |
! | AAGAATTTCTAACTATTGCA+TGG | - | chr1_3:73596708-73596727 | Msa0139770:CDS | 25.0% |
! | AGAATTTCTAACTATTGCAT+GGG | - | chr1_3:73596709-73596728 | Msa0139770:CDS | 25.0% |
! | CCAATAGAAAAATATTGGAA+GGG | + | chr1_3:73596761-73596780 | None:intergenic | 25.0% |
! | TCCAATAGAAAAATATTGGA+AGG | + | chr1_3:73596762-73596781 | None:intergenic | 25.0% |
! | AAGCTCCAATAGAAAAATAT+TGG | + | chr1_3:73596766-73596785 | None:intergenic | 25.0% |
!! | ACTGACAAGATCATTTTATT+TGG | - | chr1_3:73596974-73596993 | Msa0139770:CDS | 25.0% |
! | GAACGTTGATATCTAATTAA+TGG | + | chr1_3:73597022-73597041 | None:intergenic | 25.0% |
! | TAAAGGTAAATGCGTAAAAA+AGG | - | chr1_3:73597081-73597100 | Msa0139770:CDS | 25.0% |
! | AAAGGTAAATGCGTAAAAAA+GGG | - | chr1_3:73597082-73597101 | Msa0139770:CDS | 25.0% |
! | AAAAATGGAATTGTGATTCT+GGG | - | chr1_3:73597364-73597383 | Msa0139770:CDS | 25.0% |
! | AATTAAAGTAGGTGATAAAG+TGG | - | chr1_3:73597638-73597657 | Msa0139770:CDS | 25.0% |
! | AACAAAAATGTATTGTTCTC+GGG | + | chr1_3:73596026-73596045 | None:intergenic | 25.0% |
! | CATTTGATTGGAATGAAATT+TGG | - | chr1_3:73596074-73596093 | Msa0139770:CDS | 25.0% |
!! | ATTGGAATGAAATTTGGAAT+GGG | - | chr1_3:73596080-73596099 | Msa0139770:CDS | 25.0% |
! | GATCTATTACAAGATCAATT+TGG | - | chr1_3:73596155-73596174 | Msa0139770:CDS | 25.0% |
! | ATTACAAGATCAATTTGGAT+TGG | - | chr1_3:73596160-73596179 | Msa0139770:CDS | 25.0% |
! | CGTTTAGAAAATATAATTCG+AGG | - | chr1_3:73596191-73596210 | Msa0139770:CDS | 25.0% |
!! | GATCTAAAACTTGAGATAAT+GGG | + | chr1_3:73596319-73596338 | None:intergenic | 25.0% |
! | CTCTCAGAAATTTCAAAAAA+TGG | + | chr1_3:73596560-73596579 | None:intergenic | 25.0% |
! | ATATAGTATTCATCTCTACT+TGG | + | chr1_3:73596614-73596633 | None:intergenic | 25.0% |
! | AAGTAGAGATGAATACTATA+TGG | - | chr1_3:73596613-73596632 | Msa0139770:CDS | 25.0% |
! | CAATAGTTAGAAATTCTTGA+CGG | + | chr1_3:73596706-73596725 | None:intergenic | 25.0% |
! | AAGAATTTCTAACTATTGCA+TGG | - | chr1_3:73596708-73596727 | Msa0139770:CDS | 25.0% |
! | AGAATTTCTAACTATTGCAT+GGG | - | chr1_3:73596709-73596728 | Msa0139770:CDS | 25.0% |
! | CCAATAGAAAAATATTGGAA+GGG | + | chr1_3:73596761-73596780 | None:intergenic | 25.0% |
! | TCCAATAGAAAAATATTGGA+AGG | + | chr1_3:73596762-73596781 | None:intergenic | 25.0% |
! | AAGCTCCAATAGAAAAATAT+TGG | + | chr1_3:73596766-73596785 | None:intergenic | 25.0% |
!! | ACTGACAAGATCATTTTATT+TGG | - | chr1_3:73596974-73596993 | Msa0139770:CDS | 25.0% |
! | GAACGTTGATATCTAATTAA+TGG | + | chr1_3:73597022-73597041 | None:intergenic | 25.0% |
! | TAAAGGTAAATGCGTAAAAA+AGG | - | chr1_3:73597081-73597100 | Msa0139770:CDS | 25.0% |
! | AAAGGTAAATGCGTAAAAAA+GGG | - | chr1_3:73597082-73597101 | Msa0139770:CDS | 25.0% |
! | AAAAATGGAATTGTGATTCT+GGG | - | chr1_3:73597364-73597383 | Msa0139770:CDS | 25.0% |
! | AATTAAAGTAGGTGATAAAG+TGG | - | chr1_3:73597638-73597657 | Msa0139770:CDS | 25.0% |
GTATATCAATGTTCAGTCTT+CGG | + | chr1_3:73596004-73596023 | None:intergenic | 30.0% | |
GATTGGAATGAAATTTGGAA+TGG | - | chr1_3:73596079-73596098 | Msa0139770:CDS | 30.0% | |
ATCTTGTAATAGATCTGCTA+CGG | + | chr1_3:73596150-73596169 | None:intergenic | 30.0% | |
ATAATTCGAGGAACTATATC+TGG | - | chr1_3:73596203-73596222 | Msa0139770:intron | 30.0% | |
GATTCATAAGTGGTTGTTAA+TGG | + | chr1_3:73596281-73596300 | None:intergenic | 30.0% | |
!!! | ACCACTTATGAATCGTTTTT+TGG | - | chr1_3:73596287-73596306 | Msa0139770:intron | 30.0% |
TCCAAAAAACGATTCATAAG+TGG | + | chr1_3:73596291-73596310 | None:intergenic | 30.0% | |
! | CGATCTAAAACTTGAGATAA+TGG | + | chr1_3:73596320-73596339 | None:intergenic | 30.0% |
! | TTTTCTCCCATGAACTATTT+GGG | + | chr1_3:73596357-73596376 | None:intergenic | 30.0% |
! | ATTTTCTCCCATGAACTATT+TGG | + | chr1_3:73596358-73596377 | None:intergenic | 30.0% |
TGGGAGAAAATTGAGTTATT+TGG | - | chr1_3:73596367-73596386 | Msa0139770:CDS | 30.0% | |
GGGAGAAAATTGAGTTATTT+GGG | - | chr1_3:73596368-73596387 | Msa0139770:CDS | 30.0% | |
!!! | AATTTTTTAGCACTGAATCG+AGG | - | chr1_3:73596647-73596666 | Msa0139770:CDS | 30.0% |
! | CCCTTCCAATATTTTTCTAT+TGG | - | chr1_3:73596758-73596777 | Msa0139770:CDS | 30.0% |
!! | ATGCATGCAAGTATTTTTGT+TGG | + | chr1_3:73597044-73597063 | None:intergenic | 30.0% |
TATTAGTAGCTTATATGCCA+TGG | - | chr1_3:73597164-73597183 | Msa0139770:CDS | 30.0% | |
ATTAGTAGCTTATATGCCAT+GGG | - | chr1_3:73597165-73597184 | Msa0139770:CDS | 30.0% | |
GTCTAAATTTCGGAGTAAAT+GGG | + | chr1_3:73597344-73597363 | None:intergenic | 30.0% | |
TGTCTAAATTTCGGAGTAAA+TGG | + | chr1_3:73597345-73597364 | None:intergenic | 30.0% | |
CTCCGAAATTTAGACAAAAA+TGG | - | chr1_3:73597349-73597368 | Msa0139770:CDS | 30.0% | |
CAAAAATGGAATTGTGATTC+TGG | - | chr1_3:73597363-73597382 | Msa0139770:CDS | 30.0% | |
AGATTATTACGAGCTATACT+TGG | - | chr1_3:73597469-73597488 | Msa0139770:CDS | 30.0% | |
GATTATTACGAGCTATACTT+GGG | - | chr1_3:73597470-73597489 | Msa0139770:CDS | 30.0% | |
! | ACTTGTCTAAAACTACCTAT+AGG | - | chr1_3:73597516-73597535 | Msa0139770:CDS | 30.0% |
CAGAAACGTGAAATTAAAGT+AGG | - | chr1_3:73597627-73597646 | Msa0139770:CDS | 30.0% | |
! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr1_3:73597689-73597708 | Msa0139770:CDS | 30.0% |
AATGAATGTAGGACAGATAT+TGG | - | chr1_3:73597779-73597798 | Msa0139770:CDS | 30.0% | |
GTATATCAATGTTCAGTCTT+CGG | + | chr1_3:73596004-73596023 | None:intergenic | 30.0% | |
GATTGGAATGAAATTTGGAA+TGG | - | chr1_3:73596079-73596098 | Msa0139770:CDS | 30.0% | |
ATCTTGTAATAGATCTGCTA+CGG | + | chr1_3:73596150-73596169 | None:intergenic | 30.0% | |
ATAATTCGAGGAACTATATC+TGG | - | chr1_3:73596203-73596222 | Msa0139770:intron | 30.0% | |
GATTCATAAGTGGTTGTTAA+TGG | + | chr1_3:73596281-73596300 | None:intergenic | 30.0% | |
!!! | ACCACTTATGAATCGTTTTT+TGG | - | chr1_3:73596287-73596306 | Msa0139770:intron | 30.0% |
TCCAAAAAACGATTCATAAG+TGG | + | chr1_3:73596291-73596310 | None:intergenic | 30.0% | |
! | CGATCTAAAACTTGAGATAA+TGG | + | chr1_3:73596320-73596339 | None:intergenic | 30.0% |
! | TTTTCTCCCATGAACTATTT+GGG | + | chr1_3:73596357-73596376 | None:intergenic | 30.0% |
! | ATTTTCTCCCATGAACTATT+TGG | + | chr1_3:73596358-73596377 | None:intergenic | 30.0% |
TGGGAGAAAATTGAGTTATT+TGG | - | chr1_3:73596367-73596386 | Msa0139770:CDS | 30.0% | |
GGGAGAAAATTGAGTTATTT+GGG | - | chr1_3:73596368-73596387 | Msa0139770:CDS | 30.0% | |
!!! | AATTTTTTAGCACTGAATCG+AGG | - | chr1_3:73596647-73596666 | Msa0139770:CDS | 30.0% |
! | CCCTTCCAATATTTTTCTAT+TGG | - | chr1_3:73596758-73596777 | Msa0139770:CDS | 30.0% |
!! | ATGCATGCAAGTATTTTTGT+TGG | + | chr1_3:73597044-73597063 | None:intergenic | 30.0% |
TATTAGTAGCTTATATGCCA+TGG | - | chr1_3:73597164-73597183 | Msa0139770:CDS | 30.0% | |
ATTAGTAGCTTATATGCCAT+GGG | - | chr1_3:73597165-73597184 | Msa0139770:CDS | 30.0% | |
GTCTAAATTTCGGAGTAAAT+GGG | + | chr1_3:73597344-73597363 | None:intergenic | 30.0% | |
TGTCTAAATTTCGGAGTAAA+TGG | + | chr1_3:73597345-73597364 | None:intergenic | 30.0% | |
CTCCGAAATTTAGACAAAAA+TGG | - | chr1_3:73597349-73597368 | Msa0139770:CDS | 30.0% | |
CAAAAATGGAATTGTGATTC+TGG | - | chr1_3:73597363-73597382 | Msa0139770:CDS | 30.0% | |
AGATTATTACGAGCTATACT+TGG | - | chr1_3:73597469-73597488 | Msa0139770:CDS | 30.0% | |
GATTATTACGAGCTATACTT+GGG | - | chr1_3:73597470-73597489 | Msa0139770:CDS | 30.0% | |
! | ACTTGTCTAAAACTACCTAT+AGG | - | chr1_3:73597516-73597535 | Msa0139770:CDS | 30.0% |
CAGAAACGTGAAATTAAAGT+AGG | - | chr1_3:73597627-73597646 | Msa0139770:CDS | 30.0% | |
! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr1_3:73597689-73597708 | Msa0139770:CDS | 30.0% |
AATGAATGTAGGACAGATAT+TGG | - | chr1_3:73597779-73597798 | Msa0139770:CDS | 30.0% | |
GTTGAAGTCACTAAATTCTG+AGG | + | chr1_3:73596257-73596276 | None:intergenic | 35.0% | |
AACTATTTGGGTCAATGGAT+TGG | + | chr1_3:73596345-73596364 | None:intergenic | 35.0% | |
CATTGACCCAAATAGTTCAT+GGG | - | chr1_3:73596348-73596367 | Msa0139770:intron | 35.0% | |
AAATTGAGTTATTTGGGTCC+TGG | - | chr1_3:73596374-73596393 | Msa0139770:CDS | 35.0% | |
GGAATCAATGTAGGACTTAT+TGG | - | chr1_3:73596485-73596504 | Msa0139770:CDS | 35.0% | |
! | TGAATACTATATGGTAGCGA+CGG | - | chr1_3:73596622-73596641 | Msa0139770:CDS | 35.0% |
ATGCTCGATAAAAGGAATCA+GGG | + | chr1_3:73596789-73596808 | None:intergenic | 35.0% | |
TATGCTCGATAAAAGGAATC+AGG | + | chr1_3:73596790-73596809 | None:intergenic | 35.0% | |
GCATCATTATGCTCGATAAA+AGG | + | chr1_3:73596797-73596816 | None:intergenic | 35.0% | |
! | AGTTCCAACAATGCACTTTT+CGG | + | chr1_3:73596876-73596895 | None:intergenic | 35.0% |
CAAAAATCCCAGGTTCATAA+AGG | - | chr1_3:73597064-73597083 | Msa0139770:CDS | 35.0% | |
GCATTTACCTTTATGAACCT+GGG | + | chr1_3:73597074-73597093 | None:intergenic | 35.0% | |
!! | AAGGGACAAATTTTAGCAGA+TGG | - | chr1_3:73597100-73597119 | Msa0139770:CDS | 35.0% |
!! | AATTGTGATTCTGGGATCTT+GGG | - | chr1_3:73597372-73597391 | Msa0139770:CDS | 35.0% |
!! | AGAAACAGGGGATATTTTAG+TGG | - | chr1_3:73597396-73597415 | Msa0139770:CDS | 35.0% |
!!! | GAAACAGGGGATATTTTAGT+GGG | - | chr1_3:73597397-73597416 | Msa0139770:CDS | 35.0% |
GCTCGTAATAATCTATCTTC+CGG | + | chr1_3:73597463-73597482 | None:intergenic | 35.0% | |
!! | GTTTTAGACAAGTTTCCTTG+AGG | + | chr1_3:73597509-73597528 | None:intergenic | 35.0% |
! | TGTCTAAAACTACCTATAGG+TGG | - | chr1_3:73597519-73597538 | Msa0139770:CDS | 35.0% |
TAAAACTACCTATAGGTGGT+AGG | - | chr1_3:73597523-73597542 | Msa0139770:CDS | 35.0% | |
AAAACTACCTATAGGTGGTA+GGG | - | chr1_3:73597524-73597543 | Msa0139770:CDS | 35.0% | |
TCCATCTCACATCAATAACT+CGG | + | chr1_3:73597551-73597570 | None:intergenic | 35.0% | |
AGATGGATCCAAAAAAAAGC+AGG | - | chr1_3:73597564-73597583 | Msa0139770:CDS | 35.0% | |
!!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr1_3:73597575-73597594 | None:intergenic | 35.0% |
!! | GATATGCCTTATTTGCAAGA+TGG | - | chr1_3:73597711-73597730 | Msa0139770:CDS | 35.0% |
ATATGGTCTTCAACCCATTA+GGG | - | chr1_3:73597745-73597764 | Msa0139770:CDS | 35.0% | |
CAGATATTGGAATGTTCACT+CGG | - | chr1_3:73597792-73597811 | Msa0139770:CDS | 35.0% | |
GTTGAAGTCACTAAATTCTG+AGG | + | chr1_3:73596257-73596276 | None:intergenic | 35.0% | |
AACTATTTGGGTCAATGGAT+TGG | + | chr1_3:73596345-73596364 | None:intergenic | 35.0% | |
CATTGACCCAAATAGTTCAT+GGG | - | chr1_3:73596348-73596367 | Msa0139770:intron | 35.0% | |
AAATTGAGTTATTTGGGTCC+TGG | - | chr1_3:73596374-73596393 | Msa0139770:CDS | 35.0% | |
GGAATCAATGTAGGACTTAT+TGG | - | chr1_3:73596485-73596504 | Msa0139770:CDS | 35.0% | |
! | TGAATACTATATGGTAGCGA+CGG | - | chr1_3:73596622-73596641 | Msa0139770:CDS | 35.0% |
ATGCTCGATAAAAGGAATCA+GGG | + | chr1_3:73596789-73596808 | None:intergenic | 35.0% | |
TATGCTCGATAAAAGGAATC+AGG | + | chr1_3:73596790-73596809 | None:intergenic | 35.0% | |
GCATCATTATGCTCGATAAA+AGG | + | chr1_3:73596797-73596816 | None:intergenic | 35.0% | |
! | AGTTCCAACAATGCACTTTT+CGG | + | chr1_3:73596876-73596895 | None:intergenic | 35.0% |
CAAAAATCCCAGGTTCATAA+AGG | - | chr1_3:73597064-73597083 | Msa0139770:CDS | 35.0% | |
GCATTTACCTTTATGAACCT+GGG | + | chr1_3:73597074-73597093 | None:intergenic | 35.0% | |
!! | AAGGGACAAATTTTAGCAGA+TGG | - | chr1_3:73597100-73597119 | Msa0139770:CDS | 35.0% |
!! | AATTGTGATTCTGGGATCTT+GGG | - | chr1_3:73597372-73597391 | Msa0139770:CDS | 35.0% |
!! | AGAAACAGGGGATATTTTAG+TGG | - | chr1_3:73597396-73597415 | Msa0139770:CDS | 35.0% |
!!! | GAAACAGGGGATATTTTAGT+GGG | - | chr1_3:73597397-73597416 | Msa0139770:CDS | 35.0% |
GCTCGTAATAATCTATCTTC+CGG | + | chr1_3:73597463-73597482 | None:intergenic | 35.0% | |
!! | GTTTTAGACAAGTTTCCTTG+AGG | + | chr1_3:73597509-73597528 | None:intergenic | 35.0% |
! | TGTCTAAAACTACCTATAGG+TGG | - | chr1_3:73597519-73597538 | Msa0139770:CDS | 35.0% |
TAAAACTACCTATAGGTGGT+AGG | - | chr1_3:73597523-73597542 | Msa0139770:CDS | 35.0% | |
AAAACTACCTATAGGTGGTA+GGG | - | chr1_3:73597524-73597543 | Msa0139770:CDS | 35.0% | |
TCCATCTCACATCAATAACT+CGG | + | chr1_3:73597551-73597570 | None:intergenic | 35.0% | |
AGATGGATCCAAAAAAAAGC+AGG | - | chr1_3:73597564-73597583 | Msa0139770:CDS | 35.0% | |
!!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr1_3:73597575-73597594 | None:intergenic | 35.0% |
!! | GATATGCCTTATTTGCAAGA+TGG | - | chr1_3:73597711-73597730 | Msa0139770:CDS | 35.0% |
ATATGGTCTTCAACCCATTA+GGG | - | chr1_3:73597745-73597764 | Msa0139770:CDS | 35.0% | |
CAGATATTGGAATGTTCACT+CGG | - | chr1_3:73597792-73597811 | Msa0139770:CDS | 35.0% | |
! | GTCACTAAATTCTGAGGAGT+AGG | + | chr1_3:73596251-73596270 | None:intergenic | 40.0% |
CCATGAACTATTTGGGTCAA+TGG | + | chr1_3:73596350-73596369 | None:intergenic | 40.0% | |
CCATTGACCCAAATAGTTCA+TGG | - | chr1_3:73596347-73596366 | Msa0139770:intron | 40.0% | |
!!! | GAACTGCTAGTTTTCGGATA+CGG | - | chr1_3:73596411-73596430 | Msa0139770:CDS | 40.0% |
!!! | AACTGCTAGTTTTCGGATAC+GGG | - | chr1_3:73596412-73596431 | Msa0139770:CDS | 40.0% |
GATATCCATCCTAGTCACTA+TGG | - | chr1_3:73596434-73596453 | Msa0139770:CDS | 40.0% | |
CATTTGTCCAATTGACACCT+CGG | - | chr1_3:73596460-73596479 | Msa0139770:CDS | 40.0% | |
TGTAGGACTTATTGGATCCT+TGG | - | chr1_3:73596493-73596512 | Msa0139770:CDS | 40.0% | |
! | GAATACTATATGGTAGCGAC+GGG | - | chr1_3:73596623-73596642 | Msa0139770:CDS | 40.0% |
TCTAACTATTGCATGGGAAC+AGG | - | chr1_3:73596715-73596734 | Msa0139770:CDS | 40.0% | |
! | GAAAAGTGCATTGTTGGAAC+TGG | - | chr1_3:73596875-73596894 | Msa0139770:CDS | 40.0% |
TTGCATGCATCAAAAATCCC+AGG | - | chr1_3:73597054-73597073 | Msa0139770:CDS | 40.0% | |
CGCATTTACCTTTATGAACC+TGG | + | chr1_3:73597075-73597094 | None:intergenic | 40.0% | |
TCAGAATTGTAACCTTCCCA+TGG | + | chr1_3:73597184-73597203 | None:intergenic | 40.0% | |
TGTACTCATTAGTGAACGTC+TGG | - | chr1_3:73597210-73597229 | Msa0139770:CDS | 40.0% | |
TAGTGATTCTTTCAGGACCA+TGG | + | chr1_3:73597300-73597319 | None:intergenic | 40.0% | |
! | AGTAAATGGGCTTCTAGATG+TGG | + | chr1_3:73597331-73597350 | None:intergenic | 40.0% |
!! | GAATTGTGATTCTGGGATCT+TGG | - | chr1_3:73597371-73597390 | Msa0139770:CDS | 40.0% |
GGGTAAATTAACGCCTCAAA+TGG | - | chr1_3:73597417-73597436 | Msa0139770:CDS | 40.0% | |
TAATCTATCTTCCGGAGCAT+AGG | + | chr1_3:73597455-73597474 | None:intergenic | 40.0% | |
AAACTACCTATAGGTGGTAG+GGG | - | chr1_3:73597525-73597544 | Msa0139770:CDS | 40.0% | |
AAAGTAGGTGATAAAGTGGC+CGG | - | chr1_3:73597642-73597661 | Msa0139770:CDS | 40.0% | |
! | ACCTTTATTTCCATGTCTCC+CGG | + | chr1_3:73597664-73597683 | None:intergenic | 40.0% |
GGTCTTCCATCTTGCAAATA+AGG | + | chr1_3:73597720-73597739 | None:intergenic | 40.0% | |
! | TGGGTTGAAGACCATATCAA+CGG | + | chr1_3:73597742-73597761 | None:intergenic | 40.0% |
GATATGGTCTTCAACCCATT+AGG | - | chr1_3:73597744-73597763 | Msa0139770:CDS | 40.0% | |
TATGGTCTTCAACCCATTAG+GGG | - | chr1_3:73597746-73597765 | Msa0139770:CDS | 40.0% | |
TGTCCTACATTCATTCGTGA+GGG | + | chr1_3:73597774-73597793 | None:intergenic | 40.0% | |
!! | AATGTTCACTCGGATTAGCT+GGG | - | chr1_3:73597802-73597821 | Msa0139770:CDS | 40.0% |
! | GTCACTAAATTCTGAGGAGT+AGG | + | chr1_3:73596251-73596270 | None:intergenic | 40.0% |
CCATGAACTATTTGGGTCAA+TGG | + | chr1_3:73596350-73596369 | None:intergenic | 40.0% | |
CCATTGACCCAAATAGTTCA+TGG | - | chr1_3:73596347-73596366 | Msa0139770:intron | 40.0% | |
!!! | GAACTGCTAGTTTTCGGATA+CGG | - | chr1_3:73596411-73596430 | Msa0139770:CDS | 40.0% |
!!! | AACTGCTAGTTTTCGGATAC+GGG | - | chr1_3:73596412-73596431 | Msa0139770:CDS | 40.0% |
GATATCCATCCTAGTCACTA+TGG | - | chr1_3:73596434-73596453 | Msa0139770:CDS | 40.0% | |
CATTTGTCCAATTGACACCT+CGG | - | chr1_3:73596460-73596479 | Msa0139770:CDS | 40.0% | |
TGTAGGACTTATTGGATCCT+TGG | - | chr1_3:73596493-73596512 | Msa0139770:CDS | 40.0% | |
! | GAATACTATATGGTAGCGAC+GGG | - | chr1_3:73596623-73596642 | Msa0139770:CDS | 40.0% |
TCTAACTATTGCATGGGAAC+AGG | - | chr1_3:73596715-73596734 | Msa0139770:CDS | 40.0% | |
! | GAAAAGTGCATTGTTGGAAC+TGG | - | chr1_3:73596875-73596894 | Msa0139770:CDS | 40.0% |
TTGCATGCATCAAAAATCCC+AGG | - | chr1_3:73597054-73597073 | Msa0139770:CDS | 40.0% | |
CGCATTTACCTTTATGAACC+TGG | + | chr1_3:73597075-73597094 | None:intergenic | 40.0% | |
TCAGAATTGTAACCTTCCCA+TGG | + | chr1_3:73597184-73597203 | None:intergenic | 40.0% | |
TGTACTCATTAGTGAACGTC+TGG | - | chr1_3:73597210-73597229 | Msa0139770:CDS | 40.0% | |
TAGTGATTCTTTCAGGACCA+TGG | + | chr1_3:73597300-73597319 | None:intergenic | 40.0% | |
! | AGTAAATGGGCTTCTAGATG+TGG | + | chr1_3:73597331-73597350 | None:intergenic | 40.0% |
!! | GAATTGTGATTCTGGGATCT+TGG | - | chr1_3:73597371-73597390 | Msa0139770:CDS | 40.0% |
GGGTAAATTAACGCCTCAAA+TGG | - | chr1_3:73597417-73597436 | Msa0139770:CDS | 40.0% | |
TAATCTATCTTCCGGAGCAT+AGG | + | chr1_3:73597455-73597474 | None:intergenic | 40.0% | |
AAACTACCTATAGGTGGTAG+GGG | - | chr1_3:73597525-73597544 | Msa0139770:CDS | 40.0% | |
AAAGTAGGTGATAAAGTGGC+CGG | - | chr1_3:73597642-73597661 | Msa0139770:CDS | 40.0% | |
! | ACCTTTATTTCCATGTCTCC+CGG | + | chr1_3:73597664-73597683 | None:intergenic | 40.0% |
GGTCTTCCATCTTGCAAATA+AGG | + | chr1_3:73597720-73597739 | None:intergenic | 40.0% | |
! | TGGGTTGAAGACCATATCAA+CGG | + | chr1_3:73597742-73597761 | None:intergenic | 40.0% |
GATATGGTCTTCAACCCATT+AGG | - | chr1_3:73597744-73597763 | Msa0139770:CDS | 40.0% | |
TATGGTCTTCAACCCATTAG+GGG | - | chr1_3:73597746-73597765 | Msa0139770:CDS | 40.0% | |
TGTCCTACATTCATTCGTGA+GGG | + | chr1_3:73597774-73597793 | None:intergenic | 40.0% | |
!! | AATGTTCACTCGGATTAGCT+GGG | - | chr1_3:73597802-73597821 | Msa0139770:CDS | 40.0% |
GCAGCTGTCAATATATCTCG+CGG | + | chr1_3:73596050-73596069 | None:intergenic | 45.0% | |
GCGAGATATATTGACAGCTG+CGG | - | chr1_3:73596049-73596068 | Msa0139770:CDS | 45.0% | |
ACAGCTGCGGATCATTTGAT+TGG | - | chr1_3:73596062-73596081 | Msa0139770:CDS | 45.0% | |
TTGAGTTATTTGGGTCCTGG+AGG | - | chr1_3:73596377-73596396 | Msa0139770:CDS | 45.0% | |
CAAATGCGTCCATAGTGACT+AGG | + | chr1_3:73596446-73596465 | None:intergenic | 45.0% | |
! | ATTCCTTCCGAGGTGTCAAT+TGG | + | chr1_3:73596470-73596489 | None:intergenic | 45.0% |
ACCTCGGAAGGAATCAATGT+AGG | - | chr1_3:73596476-73596495 | Msa0139770:CDS | 45.0% | |
!! | TCCTACATTGATTCCTTCCG+AGG | + | chr1_3:73596480-73596499 | None:intergenic | 45.0% |
AATCCTTGCGTGAATTGCCA+AGG | + | chr1_3:73596513-73596532 | None:intergenic | 45.0% | |
TTGGCAATTCACGCAAGGAT+TGG | - | chr1_3:73596512-73596531 | Msa0139770:CDS | 45.0% | |
! | AGCACTGAATCGAGGTATTC+AGG | - | chr1_3:73596655-73596674 | Msa0139770:CDS | 45.0% |
! | ACTGAATCGAGGTATTCAGG+AGG | - | chr1_3:73596658-73596677 | Msa0139770:CDS | 45.0% |
! | AATTCTTGACGGTATCGAGC+TGG | + | chr1_3:73596695-73596714 | None:intergenic | 45.0% |
GTCAAGCAGTTCCTCTTTCT+CGG | - | chr1_3:73596849-73596868 | Msa0139770:CDS | 45.0% | |
GTGCATTGTTGGAACTGGAT+TGG | - | chr1_3:73596880-73596899 | Msa0139770:CDS | 45.0% | |
AACGATCTTTCCTGCGTGTT+CGG | + | chr1_3:73596945-73596964 | None:intergenic | 45.0% | |
GTAGCTTATATGCCATGGGA+AGG | - | chr1_3:73597169-73597188 | Msa0139770:CDS | 45.0% | |
TGGGATCTTGGGTAGAAACA+GGG | - | chr1_3:73597383-73597402 | Msa0139770:CDS | 45.0% | |
GAGGATTCTTTCGCCATTTG+AGG | + | chr1_3:73597433-73597452 | None:intergenic | 45.0% | |
GAAAGAATCCTCCTATGCTC+CGG | - | chr1_3:73597441-73597460 | Msa0139770:CDS | 45.0% | |
ACGAGCTATACTTGGGATTC+AGG | - | chr1_3:73597477-73597496 | Msa0139770:CDS | 45.0% | |
GCCGAGTTATTGATGTGAGA+TGG | - | chr1_3:73597547-73597566 | Msa0139770:CDS | 45.0% | |
AAGTAGGTGATAAAGTGGCC+GGG | - | chr1_3:73597643-73597662 | Msa0139770:CDS | 45.0% | |
AGATGGAAGACCCGTTGATA+TGG | - | chr1_3:73597728-73597747 | Msa0139770:CDS | 45.0% | |
GGGTTGAAGACCATATCAAC+GGG | + | chr1_3:73597741-73597760 | None:intergenic | 45.0% | |
GTACCCTCACGAATGAATGT+AGG | - | chr1_3:73597768-73597787 | Msa0139770:CDS | 45.0% | |
CTGTCCTACATTCATTCGTG+AGG | + | chr1_3:73597775-73597794 | None:intergenic | 45.0% | |
!! | GAATGTTCACTCGGATTAGC+TGG | - | chr1_3:73597801-73597820 | Msa0139770:CDS | 45.0% |
GCAGCTGTCAATATATCTCG+CGG | + | chr1_3:73596050-73596069 | None:intergenic | 45.0% | |
GCGAGATATATTGACAGCTG+CGG | - | chr1_3:73596049-73596068 | Msa0139770:CDS | 45.0% | |
ACAGCTGCGGATCATTTGAT+TGG | - | chr1_3:73596062-73596081 | Msa0139770:CDS | 45.0% | |
TTGAGTTATTTGGGTCCTGG+AGG | - | chr1_3:73596377-73596396 | Msa0139770:CDS | 45.0% | |
CAAATGCGTCCATAGTGACT+AGG | + | chr1_3:73596446-73596465 | None:intergenic | 45.0% | |
! | ATTCCTTCCGAGGTGTCAAT+TGG | + | chr1_3:73596470-73596489 | None:intergenic | 45.0% |
ACCTCGGAAGGAATCAATGT+AGG | - | chr1_3:73596476-73596495 | Msa0139770:CDS | 45.0% | |
!! | TCCTACATTGATTCCTTCCG+AGG | + | chr1_3:73596480-73596499 | None:intergenic | 45.0% |
AATCCTTGCGTGAATTGCCA+AGG | + | chr1_3:73596513-73596532 | None:intergenic | 45.0% | |
TTGGCAATTCACGCAAGGAT+TGG | - | chr1_3:73596512-73596531 | Msa0139770:CDS | 45.0% | |
! | AGCACTGAATCGAGGTATTC+AGG | - | chr1_3:73596655-73596674 | Msa0139770:CDS | 45.0% |
! | ACTGAATCGAGGTATTCAGG+AGG | - | chr1_3:73596658-73596677 | Msa0139770:CDS | 45.0% |
! | AATTCTTGACGGTATCGAGC+TGG | + | chr1_3:73596695-73596714 | None:intergenic | 45.0% |
GTCAAGCAGTTCCTCTTTCT+CGG | - | chr1_3:73596849-73596868 | Msa0139770:CDS | 45.0% | |
GTGCATTGTTGGAACTGGAT+TGG | - | chr1_3:73596880-73596899 | Msa0139770:CDS | 45.0% | |
AACGATCTTTCCTGCGTGTT+CGG | + | chr1_3:73596945-73596964 | None:intergenic | 45.0% | |
GTAGCTTATATGCCATGGGA+AGG | - | chr1_3:73597169-73597188 | Msa0139770:CDS | 45.0% | |
TGGGATCTTGGGTAGAAACA+GGG | - | chr1_3:73597383-73597402 | Msa0139770:CDS | 45.0% | |
GAGGATTCTTTCGCCATTTG+AGG | + | chr1_3:73597433-73597452 | None:intergenic | 45.0% | |
GAAAGAATCCTCCTATGCTC+CGG | - | chr1_3:73597441-73597460 | Msa0139770:CDS | 45.0% | |
ACGAGCTATACTTGGGATTC+AGG | - | chr1_3:73597477-73597496 | Msa0139770:CDS | 45.0% | |
GCCGAGTTATTGATGTGAGA+TGG | - | chr1_3:73597547-73597566 | Msa0139770:CDS | 45.0% | |
AAGTAGGTGATAAAGTGGCC+GGG | - | chr1_3:73597643-73597662 | Msa0139770:CDS | 45.0% | |
AGATGGAAGACCCGTTGATA+TGG | - | chr1_3:73597728-73597747 | Msa0139770:CDS | 45.0% | |
GGGTTGAAGACCATATCAAC+GGG | + | chr1_3:73597741-73597760 | None:intergenic | 45.0% | |
GTACCCTCACGAATGAATGT+AGG | - | chr1_3:73597768-73597787 | Msa0139770:CDS | 45.0% | |
CTGTCCTACATTCATTCGTG+AGG | + | chr1_3:73597775-73597794 | None:intergenic | 45.0% | |
!! | GAATGTTCACTCGGATTAGC+TGG | - | chr1_3:73597801-73597820 | Msa0139770:CDS | 45.0% |
TTTGGGTCCTGGAGGATTGA+CGG | - | chr1_3:73596385-73596404 | Msa0139770:CDS | 50.0% | |
TGCGTCCATAGTGACTAGGA+TGG | + | chr1_3:73596442-73596461 | None:intergenic | 50.0% | |
TGTCCAATTGACACCTCGGA+AGG | - | chr1_3:73596464-73596483 | Msa0139770:CDS | 50.0% | |
GATCCTTGGCAATTCACGCA+AGG | - | chr1_3:73596507-73596526 | Msa0139770:CDS | 50.0% | |
!! | TTCACGCAAGGATTGGTCCT+TGG | - | chr1_3:73596519-73596538 | Msa0139770:CDS | 50.0% |
!! | TCACGCAAGGATTGGTCCTT+GGG | - | chr1_3:73596520-73596539 | Msa0139770:CDS | 50.0% |
GGACTTTCTATAGACCCCCA+AGG | + | chr1_3:73596539-73596558 | None:intergenic | 50.0% | |
! | CACTTTTCGGACCGAGAAAG+AGG | + | chr1_3:73596863-73596882 | None:intergenic | 50.0% |
! | CGGTCCGAAAAGTGCATTGT+TGG | - | chr1_3:73596869-73596888 | Msa0139770:CDS | 50.0% |
! | AACTGGATTGGAACGCCAAG+TGG | - | chr1_3:73596892-73596911 | Msa0139770:CDS | 50.0% |
! | CTCCTGAATCTAAGGCCACT+TGG | + | chr1_3:73596910-73596929 | None:intergenic | 50.0% |
AGCGGGAACTCCTGAATCTA+AGG | + | chr1_3:73596918-73596937 | None:intergenic | 50.0% | |
CAGACTCATGTGACAAGCCA+TGG | - | chr1_3:73597280-73597299 | Msa0139770:CDS | 50.0% | |
CTGGGATCTTGGGTAGAAAC+AGG | - | chr1_3:73597382-73597401 | Msa0139770:CDS | 50.0% | |
GGGATCTTGGGTAGAAACAG+GGG | - | chr1_3:73597384-73597403 | Msa0139770:CDS | 50.0% | |
TCTATCTTCCGGAGCATAGG+AGG | + | chr1_3:73597452-73597471 | None:intergenic | 50.0% | |
!! | GGATTCAGGTATCGACCTCA+AGG | - | chr1_3:73597491-73597510 | Msa0139770:CDS | 50.0% |
GCCGGGAGACATGGAAATAA+AGG | - | chr1_3:73597660-73597679 | Msa0139770:CDS | 50.0% | |
!! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr1_3:73597761-73597780 | None:intergenic | 50.0% |
!! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr1_3:73597762-73597781 | None:intergenic | 50.0% |
TTTGGGTCCTGGAGGATTGA+CGG | - | chr1_3:73596385-73596404 | Msa0139770:CDS | 50.0% | |
TGCGTCCATAGTGACTAGGA+TGG | + | chr1_3:73596442-73596461 | None:intergenic | 50.0% | |
TGTCCAATTGACACCTCGGA+AGG | - | chr1_3:73596464-73596483 | Msa0139770:CDS | 50.0% | |
GATCCTTGGCAATTCACGCA+AGG | - | chr1_3:73596507-73596526 | Msa0139770:CDS | 50.0% | |
!! | TTCACGCAAGGATTGGTCCT+TGG | - | chr1_3:73596519-73596538 | Msa0139770:CDS | 50.0% |
!! | TCACGCAAGGATTGGTCCTT+GGG | - | chr1_3:73596520-73596539 | Msa0139770:CDS | 50.0% |
GGACTTTCTATAGACCCCCA+AGG | + | chr1_3:73596539-73596558 | None:intergenic | 50.0% | |
! | CACTTTTCGGACCGAGAAAG+AGG | + | chr1_3:73596863-73596882 | None:intergenic | 50.0% |
! | CGGTCCGAAAAGTGCATTGT+TGG | - | chr1_3:73596869-73596888 | Msa0139770:CDS | 50.0% |
! | AACTGGATTGGAACGCCAAG+TGG | - | chr1_3:73596892-73596911 | Msa0139770:CDS | 50.0% |
! | CTCCTGAATCTAAGGCCACT+TGG | + | chr1_3:73596910-73596929 | None:intergenic | 50.0% |
AGCGGGAACTCCTGAATCTA+AGG | + | chr1_3:73596918-73596937 | None:intergenic | 50.0% | |
CAGACTCATGTGACAAGCCA+TGG | - | chr1_3:73597280-73597299 | Msa0139770:CDS | 50.0% | |
CTGGGATCTTGGGTAGAAAC+AGG | - | chr1_3:73597382-73597401 | Msa0139770:CDS | 50.0% | |
GGGATCTTGGGTAGAAACAG+GGG | - | chr1_3:73597384-73597403 | Msa0139770:CDS | 50.0% | |
TCTATCTTCCGGAGCATAGG+AGG | + | chr1_3:73597452-73597471 | None:intergenic | 50.0% | |
!! | GGATTCAGGTATCGACCTCA+AGG | - | chr1_3:73597491-73597510 | Msa0139770:CDS | 50.0% |
GCCGGGAGACATGGAAATAA+AGG | - | chr1_3:73597660-73597679 | Msa0139770:CDS | 50.0% | |
!! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr1_3:73597761-73597780 | None:intergenic | 50.0% |
!! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr1_3:73597762-73597781 | None:intergenic | 50.0% |
TTGGGTCCTGGAGGATTGAC+GGG | - | chr1_3:73596386-73596405 | Msa0139770:CDS | 55.0% | |
!!! | CGGGGCGAACTGCTAGTTTT+CGG | - | chr1_3:73596405-73596424 | Msa0139770:CDS | 55.0% |
!! | CACGCAAGGATTGGTCCTTG+GGG | - | chr1_3:73596521-73596540 | Msa0139770:CDS | 55.0% |
!! | ACGCAAGGATTGGTCCTTGG+GGG | - | chr1_3:73596522-73596541 | Msa0139770:CDS | 55.0% |
! | CGCCAAGTGGCCTTAGATTC+AGG | - | chr1_3:73596905-73596924 | Msa0139770:CDS | 55.0% |
TCCTGCGTGTTCGGCTATAG+CGG | + | chr1_3:73596936-73596955 | None:intergenic | 55.0% | |
!! | GCAGATGGTGCTGCTACTGT+TGG | - | chr1_3:73597115-73597134 | Msa0139770:CDS | 55.0% |
!! | GATGGTGCTGCTACTGTTGG+CGG | - | chr1_3:73597118-73597137 | Msa0139770:CDS | 55.0% |
TGTTGGCGGTGAACTCGCTT+TGG | - | chr1_3:73597132-73597151 | Msa0139770:CDS | 55.0% | |
GTTGGCGGTGAACTCGCTTT+GGG | - | chr1_3:73597133-73597152 | Msa0139770:CDS | 55.0% | |
GATAAAGTGGCCGGGAGACA+TGG | - | chr1_3:73597651-73597670 | Msa0139770:CDS | 55.0% | |
TTGGGTCCTGGAGGATTGAC+GGG | - | chr1_3:73596386-73596405 | Msa0139770:CDS | 55.0% | |
!!! | CGGGGCGAACTGCTAGTTTT+CGG | - | chr1_3:73596405-73596424 | Msa0139770:CDS | 55.0% |
!! | CACGCAAGGATTGGTCCTTG+GGG | - | chr1_3:73596521-73596540 | Msa0139770:CDS | 55.0% |
!! | ACGCAAGGATTGGTCCTTGG+GGG | - | chr1_3:73596522-73596541 | Msa0139770:CDS | 55.0% |
! | CGCCAAGTGGCCTTAGATTC+AGG | - | chr1_3:73596905-73596924 | Msa0139770:CDS | 55.0% |
TCCTGCGTGTTCGGCTATAG+CGG | + | chr1_3:73596936-73596955 | None:intergenic | 55.0% | |
!! | GCAGATGGTGCTGCTACTGT+TGG | - | chr1_3:73597115-73597134 | Msa0139770:CDS | 55.0% |
!! | GATGGTGCTGCTACTGTTGG+CGG | - | chr1_3:73597118-73597137 | Msa0139770:CDS | 55.0% |
TGTTGGCGGTGAACTCGCTT+TGG | - | chr1_3:73597132-73597151 | Msa0139770:CDS | 55.0% | |
GTTGGCGGTGAACTCGCTTT+GGG | - | chr1_3:73597133-73597152 | Msa0139770:CDS | 55.0% | |
GATAAAGTGGCCGGGAGACA+TGG | - | chr1_3:73597651-73597670 | Msa0139770:CDS | 55.0% | |
TGGGTCCTGGAGGATTGACG+GGG | - | chr1_3:73596387-73596406 | Msa0139770:CDS | 60.0% | |
CCTGCGTGTTCGGCTATAGC+GGG | + | chr1_3:73596935-73596954 | None:intergenic | 60.0% | |
ACTCGGCCCCTACCACCTAT+AGG | + | chr1_3:73597534-73597553 | None:intergenic | 60.0% | |
TGGGTCCTGGAGGATTGACG+GGG | - | chr1_3:73596387-73596406 | Msa0139770:CDS | 60.0% | |
CCTGCGTGTTCGGCTATAGC+GGG | + | chr1_3:73596935-73596954 | None:intergenic | 60.0% | |
ACTCGGCCCCTACCACCTAT+AGG | + | chr1_3:73597534-73597553 | None:intergenic | 60.0% | |
GTTCGCCCCGTCAATCCTCC+AGG | + | chr1_3:73596395-73596414 | None:intergenic | 65.0% | |
CCCGCTATAGCCGAACACGC+AGG | - | chr1_3:73596932-73596951 | Msa0139770:CDS | 65.0% | |
GTTCGCCCCGTCAATCCTCC+AGG | + | chr1_3:73596395-73596414 | None:intergenic | 65.0% | |
CCCGCTATAGCCGAACACGC+AGG | - | chr1_3:73596932-73596951 | Msa0139770:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 73595996 | 73597851 | 73595996 | ID=Msa0139770;Name=Msa0139770 |
chr1_3 | mRNA | 73595996 | 73597851 | 73595996 | ID=Msa0139770-mRNA-1;Parent=Msa0139770;Name=Msa0139770-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|1|1|2|0|574 |
chr1_3 | exon | 73596349 | 73597851 | 73596349 | ID=Msa0139770-mRNA-1:exon:25649;Parent=Msa0139770-mRNA-1 |
chr1_3 | exon | 73595996 | 73596217 | 73595996 | ID=Msa0139770-mRNA-1:exon:25648;Parent=Msa0139770-mRNA-1 |
chr1_3 | CDS | 73596349 | 73597851 | 73596349 | ID=Msa0139770-mRNA-1:cds;Parent=Msa0139770-mRNA-1 |
chr1_3 | CDS | 73595996 | 73596217 | 73595996 | ID=Msa0139770-mRNA-1:cds;Parent=Msa0139770-mRNA-1 |
Gene Sequence |
Protein sequence |