Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380670 | YP_009327948.1 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380670 | sp|Q9BBS9|RPOB_LOTJA | 92.919 | 805 | 57 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380670 | A0A1J0I0H8 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1354940 | Msa1380670 | 0.817206 | 3.718909e-52 | -8.615850e-47 |
| Msa1355110 | Msa1380670 | 0.830512 | 2.816270e-55 | -8.615850e-47 |
| Msa1380630 | Msa1380670 | 0.826753 | 2.281431e-54 | -8.615850e-47 |
| Msa1380670 | Msa1380700 | 0.822013 | 2.972293e-53 | -8.615850e-47 |
| Msa0139770 | Msa1380670 | 0.819796 | 9.623402e-53 | -8.615850e-47 |
| Msa0139790 | Msa1380670 | 0.818972 | 1.482618e-52 | -8.615850e-47 |
| Msa0139830 | Msa1380670 | 0.853121 | 2.946019e-61 | -8.615850e-47 |
| Msa1305150 | Msa1380670 | 0.848139 | 7.413455e-60 | -8.615850e-47 |
| Msa1086110 | Msa1380670 | 0.801742 | 7.801492e-49 | -8.615850e-47 |
| Msa1086130 | Msa1380670 | 0.852985 | 3.222284e-61 | -8.615850e-47 |
| Msa1086220 | Msa1380670 | 0.830350 | 3.086705e-55 | -8.615850e-47 |
| Msa1086240 | Msa1380670 | 0.832707 | 8.107313e-56 | -8.615850e-47 |
| Msa1086930 | Msa1380670 | 0.832116 | 1.135750e-55 | -8.615850e-47 |
| Msa0268590 | Msa1380670 | 0.837968 | 3.800528e-57 | -8.615850e-47 |
| Msa0268610 | Msa1380670 | 0.806519 | 7.906740e-50 | -8.615850e-47 |
| Msa0268820 | Msa1380670 | 0.814783 | 1.292336e-51 | -8.615850e-47 |
| Msa0344320 | Msa1380670 | 0.802372 | 5.787922e-49 | -8.615850e-47 |
| Msa1143110 | Msa1380670 | 0.814400 | 1.570578e-51 | -8.615850e-47 |
| Msa1143190 | Msa1380670 | 0.801535 | 8.599284e-49 | -8.615850e-47 |
| Msa0582500 | Msa1380670 | 0.805407 | 1.355256e-49 | -8.615850e-47 |
| Msa0582670 | Msa1380670 | 0.818646 | 1.758328e-52 | -8.615850e-47 |
| Msa0582680 | Msa1380670 | 0.810910 | 9.114397e-51 | -8.615850e-47 |
| Msa0582790 | Msa1380670 | 0.830333 | 3.115734e-55 | -8.615850e-47 |
| Msa0931060 | Msa1380670 | 0.845326 | 4.355151e-59 | -8.615850e-47 |
| Msa0931120 | Msa1380670 | 0.818146 | 2.282212e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380670 | MtrunA17_Chr4g0016641 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
| Msa1380670 | MtrunA17_CPg0493041 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
| Msa1380670 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 31 | 398 | 1 | 294 | 0.0 | 562 |
| Msa1380670 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 201 | 630 | 1 | 322 | 0.0 | 538 |
| Msa1380670 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 596 | 805 | 1 | 186 | 9.08e-121 | 366 |
| Msa1380670 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 4 | 108 | 12 | 116 | 1.28e-61 | 203 |
| Msa1380670 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 355 | 432 | 1 | 78 | 7.57e-47 | 161 |
| Msa1380670 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 383 | 786 | 728 | 1123 | 7.76e-37 | 149 |
| Msa1380670 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 383 | 746 | 782 | 1120 | 3.47e-35 | 144 |
| Msa1380670 | MtrunA17_Chr3g0136911 | 25.147 | 509 | 293 | 17 | 317 | 788 | 724 | 1181 | 5.11e-28 | 121 |
| Msa1380670 | MtrunA17_Chr8g0375171 | 24.754 | 509 | 295 | 17 | 317 | 788 | 722 | 1179 | 1.34e-27 | 120 |
| Msa1380670 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 383 | 771 | 786 | 1142 | 3.11e-27 | 119 |
| Msa1380670 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 559 | 788 | 2 | 238 | 6.21e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380670 | ATCG00190.1 | 90.458 | 807 | 75 | 1 | 1 | 805 | 266 | 1072 | 0.0 | 1524 |
| Msa1380670 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 383 | 786 | 779 | 1172 | 1.86e-37 | 152 |
| Msa1380670 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
| Msa1380670 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
| Msa1380670 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 387 | 747 | 756 | 1091 | 1.86e-25 | 114 |
| Msa1380670 | AT3G23780.1 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
| Msa1380670 | AT3G23780.2 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
| Msa1380670 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 387 | 789 | 651 | 1049 | 1.87e-24 | 110 |
| Msa1380670 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 4.17e-13 | 73.9 |
| Msa1380670 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 5.37e-13 | 73.6 |
Find 189 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | tig0020386:+95374 | Msa1380670:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | tig0020386:-96349 | None:intergenic |
| CATTTGATTGGAATGAAATT+TGG | 0.153768 | tig0020386:+95081 | Msa1380670:CDS |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | tig0020386:-97126 | None:intergenic |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | tig0020386:+97112 | Msa1380670:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | tig0020386:-96927 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | tig0020386:-96608 | None:intergenic |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | tig0020386:-96026 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | tig0020386:+97013 | Msa1380670:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | tig0020386:-97040 | None:intergenic |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | tig0020386:+95492 | Msa1380670:CDS |
| ACGAGCTATACTTGGGATTC+AGG | 0.269809 | tig0020386:+96484 | Msa1380670:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | tig0020386:+95662 | Msa1380670:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | tig0020386:+95162 | Msa1380670:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | tig0020386:-95285 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | tig0020386:-95324 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | tig0020386:-96725 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | tig0020386:-97125 | None:intergenic |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | tig0020386:+95210 | Msa1380670:CDS |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | tig0020386:-95801 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | tig0020386:-96767 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | tig0020386:+95375 | Msa1380670:CDS |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | tig0020386:-96971 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | tig0020386:+95912 | Msa1380670:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | tig0020386:+96139 | Msa1380670:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | tig0020386:-96079 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | tig0020386:-95949 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | tig0020386:+96983 | Msa1380670:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | tig0020386:+96787 | Msa1380670:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | tig0020386:-97396 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | tig0020386:-97295 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | tig0020386:+95527 | Msa1380670:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | tig0020386:-97313 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | tig0020386:+96753 | Msa1380670:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | tig0020386:+95856 | Msa1380670:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | tig0020386:+96389 | Msa1380670:CDS |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | tig0020386:-95354 | None:intergenic |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | tig0020386:+97262 | Msa1380670:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | tig0020386:+95876 | Msa1380670:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | tig0020386:-95922 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | tig0020386:+97333 | Msa1380670:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | tig0020386:-95794 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | tig0020386:-96963 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | tig0020386:+95393 | Msa1380670:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | tig0020386:+96809 | Msa1380670:CDS |
| ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | tig0020386:+95069 | Msa1380670:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | tig0020386:+96952 | Msa1380670:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | tig0020386:+96752 | Msa1380670:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | tig0020386:+97175 | Msa1380670:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | tig0020386:+96140 | Msa1380670:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | tig0020386:+96736 | Msa1380670:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | tig0020386:-95474 | None:intergenic |
| AGATTATTACGAGCTATACT+TGG | 0.409704 | tig0020386:+96476 | Msa1380670:CDS |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | tig0020386:+95500 | Msa1380670:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | tig0020386:+95722 | Msa1380670:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | tig0020386:+95882 | Msa1380670:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | tig0020386:+95526 | Msa1380670:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | tig0020386:+95392 | Msa1380670:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | tig0020386:+96378 | Msa1380670:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | tig0020386:+97169 | Msa1380670:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | tig0020386:-96348 | None:intergenic |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | tig0020386:-95349 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | tig0020386:+96668 | Msa1380670:CDS |
| GTATATCAATGTTCAGTCTT+CGG | 0.430453 | tig0020386:-95008 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | tig0020386:+95354 | Msa1380670:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | tig0020386:+95620 | Msa1380670:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | tig0020386:-96766 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | tig0020386:-97010 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | tig0020386:+97150 | Msa1380670:CDS |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | tig0020386:+96524 | Msa1380670:CDS |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | tig0020386:-96437 | None:intergenic |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | tig0020386:+95441 | Msa1380670:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | tig0020386:-96669 | None:intergenic |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | tig0020386:+95381 | Msa1380670:CDS |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | tig0020386:-96539 | None:intergenic |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | tig0020386:+97168 | Msa1380670:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | tig0020386:-96467 | None:intergenic |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | tig0020386:+97159 | Msa1380670:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | tig0020386:+97158 | Msa1380670:CDS |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | tig0020386:+96424 | Msa1380670:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | tig0020386:-95323 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | tig0020386:+96974 | Msa1380670:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | tig0020386:+95167 | Msa1380670:CDS |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | tig0020386:-96962 | None:intergenic |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | tig0020386:+95715 | Msa1380670:CDS |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | tig0020386:+97138 | Msa1380670:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | tig0020386:-95939 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | tig0020386:+95198 | Msa1380670:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | tig0020386:+96379 | Msa1380670:CDS |
| ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | tig0020386:+95087 | Msa1380670:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | tig0020386:-96863 | None:intergenic |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | tig0020386:+95519 | Msa1380670:CDS |
| GATTGGAATGAAATTTGGAA+TGG | 0.498930 | tig0020386:+95086 | Msa1380670:CDS |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | tig0020386:+97064 | Msa1380670:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | tig0020386:+95887 | Msa1380670:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | tig0020386:+97170 | Msa1380670:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | tig0020386:-95914 | None:intergenic |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | tig0020386:+96217 | Msa1380670:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | tig0020386:+97339 | Msa1380670:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | tig0020386:-95399 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | tig0020386:+96719 | Msa1380670:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | tig0020386:+96171 | Msa1380670:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | tig0020386:+96930 | Msa1380670:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | tig0020386:+96635 | Msa1380670:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | tig0020386:-95618 | None:intergenic |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | tig0020386:+96650 | Msa1380670:CDS |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | tig0020386:+96532 | Msa1380670:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | tig0020386:-96078 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | tig0020386:-97301 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | tig0020386:+96122 | Msa1380670:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | tig0020386:+96659 | Msa1380670:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | tig0020386:+97386 | Msa1380670:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | tig0020386:-96746 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | tig0020386:+97116 | Msa1380670:CDS |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | tig0020386:-95699 | None:intergenic |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | tig0020386:+96531 | Msa1380670:CDS |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | tig0020386:-95710 | None:intergenic |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | tig0020386:-96459 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | tig0020386:-96456 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | tig0020386:-96947 | None:intergenic |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | tig0020386:-95940 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | tig0020386:+95716 | Msa1380670:CDS |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | tig0020386:+96800 | Msa1380670:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | tig0020386:-96304 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | tig0020386:+95630 | Msa1380670:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | tig0020386:+96125 | Msa1380670:CDS |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | tig0020386:+95355 | Msa1380670:CDS |
| GATTATTACGAGCTATACTT+GGG | 0.558504 | tig0020386:+96477 | Msa1380670:CDS |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | tig0020386:+96555 | Msa1380670:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | tig0020386:+97265 | Msa1380670:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | tig0020386:-95154 | None:intergenic |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | tig0020386:+97390 | Msa1380670:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | tig0020386:-95255 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | tig0020386:-97375 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | tig0020386:-97092 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | tig0020386:-97124 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | tig0020386:+96810 | Msa1380670:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | tig0020386:+96448 | Msa1380670:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | tig0020386:+95629 | Msa1380670:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | tig0020386:-95484 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | tig0020386:-95450 | None:intergenic |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | tig0020386:+97127 | Msa1380670:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | tig0020386:+96646 | Msa1380670:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | tig0020386:+96953 | Msa1380670:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | tig0020386:+96287 | Msa1380670:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | tig0020386:-96780 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | tig0020386:-96335 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | tig0020386:+96962 | Msa1380670:CDS |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | tig0020386:+95471 | Msa1380670:CDS |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | tig0020386:-95793 | None:intergenic |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | tig0020386:+96390 | Msa1380670:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | tig0020386:-96188 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | tig0020386:+96172 | Msa1380670:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | tig0020386:+96651 | Msa1380670:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | tig0020386:+97137 | Msa1380670:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | tig0020386:-96556 | None:intergenic |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | tig0020386:+95528 | Msa1380670:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | tig0020386:+96176 | Msa1380670:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | tig0020386:-96779 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | tig0020386:+95514 | Msa1380670:CDS |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | tig0020386:+97076 | Msa1380670:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | tig0020386:+95899 | Msa1380670:CDS |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | tig0020386:-95261 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | tig0020386:+96533 | Msa1380670:CDS |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | tig0020386:+96868 | Msa1380670:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | tig0020386:-95517 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | tig0020386:+95467 | Msa1380670:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | tig0020386:+96776 | Msa1380670:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | tig0020386:-96747 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | tig0020386:-95446 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | tig0020386:+97142 | Msa1380670:CDS |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | tig0020386:+95529 | Msa1380670:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | tig0020386:+95384 | Msa1380670:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | tig0020386:+95394 | Msa1380670:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | tig0020386:+96391 | Msa1380670:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | tig0020386:+97117 | Msa1380670:CDS |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | tig0020386:+95483 | Msa1380670:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | tig0020386:+97285 | Msa1380670:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | tig0020386:+97247 | Msa1380670:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | tig0020386:+97153 | Msa1380670:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | tig0020386:+96754 | Msa1380670:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | tig0020386:+96499 | Msa1380670:CDS |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | tig0020386:+96527 | Msa1380670:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | tig0020386:+95939 | Msa1380670:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | tig0020386:+96984 | Msa1380670:CDS |
| GCGAGATATATTGACAGCTG+CGG | 0.702124 | tig0020386:+95056 | Msa1380670:CDS |
| GCAGCTGTCAATATATCTCG+CGG | 0.702925 | tig0020386:-95054 | None:intergenic |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | tig0020386:+97130 | Msa1380670:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | tig0020386:+95665 | Msa1380670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | - | tig0020386:97043-97062 | None:intergenic | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | - | tig0020386:97043-97062 | None:intergenic | 15.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | - | tig0020386:95034-95053 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | tig0020386:95987-96006 | Msa1380670:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | tig0020386:95988-96007 | Msa1380670:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | tig0020386:96314-96333 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | tig0020386:96361-96380 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | - | tig0020386:96611-96630 | None:intergenic | 20.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | - | tig0020386:95034-95053 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | tig0020386:95987-96006 | Msa1380670:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | tig0020386:95988-96007 | Msa1380670:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | tig0020386:96314-96333 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | tig0020386:96361-96380 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | - | tig0020386:96611-96630 | None:intergenic | 20.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | - | tig0020386:95033-95052 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | + | tig0020386:95081-95100 | Msa1380670:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | + | tig0020386:95087-95106 | Msa1380670:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | + | tig0020386:95162-95181 | Msa1380670:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | + | tig0020386:95167-95186 | Msa1380670:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | + | tig0020386:95198-95217 | Msa1380670:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | - | tig0020386:95326-95345 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | - | tig0020386:95567-95586 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | - | tig0020386:95621-95640 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | + | tig0020386:95620-95639 | Msa1380670:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | - | tig0020386:95713-95732 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | + | tig0020386:95715-95734 | Msa1380670:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | + | tig0020386:95716-95735 | Msa1380670:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | - | tig0020386:95768-95787 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | - | tig0020386:95769-95788 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | - | tig0020386:95773-95792 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | tig0020386:95981-96000 | Msa1380670:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | tig0020386:96029-96048 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | tig0020386:96088-96107 | Msa1380670:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | tig0020386:96089-96108 | Msa1380670:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | tig0020386:96371-96390 | Msa1380670:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | tig0020386:96646-96665 | Msa1380670:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | tig0020386:97025-97044 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | tig0020386:97064-97083 | Msa1380670:CDS | 25.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | - | tig0020386:95033-95052 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | + | tig0020386:95081-95100 | Msa1380670:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | + | tig0020386:95087-95106 | Msa1380670:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | + | tig0020386:95162-95181 | Msa1380670:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | + | tig0020386:95167-95186 | Msa1380670:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | + | tig0020386:95198-95217 | Msa1380670:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | - | tig0020386:95326-95345 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | - | tig0020386:95567-95586 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | - | tig0020386:95621-95640 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | + | tig0020386:95620-95639 | Msa1380670:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | - | tig0020386:95713-95732 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | + | tig0020386:95715-95734 | Msa1380670:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | + | tig0020386:95716-95735 | Msa1380670:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | - | tig0020386:95768-95787 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | - | tig0020386:95769-95788 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | - | tig0020386:95773-95792 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | tig0020386:95981-96000 | Msa1380670:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | tig0020386:96029-96048 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | tig0020386:96088-96107 | Msa1380670:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | tig0020386:96089-96108 | Msa1380670:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | tig0020386:96371-96390 | Msa1380670:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | tig0020386:96646-96665 | Msa1380670:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | tig0020386:97025-97044 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | tig0020386:97064-97083 | Msa1380670:CDS | 25.0% |
| GTATATCAATGTTCAGTCTT+CGG | - | tig0020386:95011-95030 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | + | tig0020386:95086-95105 | Msa1380670:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | - | tig0020386:95157-95176 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | + | tig0020386:95210-95229 | Msa1380670:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | - | tig0020386:95288-95307 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | + | tig0020386:95294-95313 | Msa1380670:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | - | tig0020386:95298-95317 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | - | tig0020386:95327-95346 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | - | tig0020386:95364-95383 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | - | tig0020386:95365-95384 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | + | tig0020386:95374-95393 | Msa1380670:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | + | tig0020386:95375-95394 | Msa1380670:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | + | tig0020386:95654-95673 | Msa1380670:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | + | tig0020386:95765-95784 | Msa1380670:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | tig0020386:96051-96070 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | tig0020386:96171-96190 | Msa1380670:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | tig0020386:96172-96191 | Msa1380670:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | tig0020386:96351-96370 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | tig0020386:96352-96371 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | tig0020386:96356-96375 | Msa1380670:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | tig0020386:96370-96389 | Msa1380670:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | + | tig0020386:96476-96495 | Msa1380670:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | + | tig0020386:96477-96496 | Msa1380670:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | tig0020386:96516-96535 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | tig0020386:96524-96543 | Msa1380670:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | tig0020386:96635-96654 | Msa1380670:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | tig0020386:96697-96716 | Msa1380670:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | tig0020386:96787-96806 | Msa1380670:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | - | tig0020386:96866-96885 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | + | tig0020386:96865-96884 | Msa1380670:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | - | tig0020386:96897-96916 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | + | tig0020386:96984-97003 | Msa1380670:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | tig0020386:97013-97032 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | tig0020386:97013-97032 | Msa1380670:CDS | 30.0% | |
| GTATATCAATGTTCAGTCTT+CGG | - | tig0020386:95011-95030 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | + | tig0020386:95086-95105 | Msa1380670:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | - | tig0020386:95157-95176 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | + | tig0020386:95210-95229 | Msa1380670:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | - | tig0020386:95288-95307 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | + | tig0020386:95294-95313 | Msa1380670:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | - | tig0020386:95298-95317 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | - | tig0020386:95327-95346 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | - | tig0020386:95364-95383 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | - | tig0020386:95365-95384 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | + | tig0020386:95374-95393 | Msa1380670:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | + | tig0020386:95375-95394 | Msa1380670:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | + | tig0020386:95654-95673 | Msa1380670:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | + | tig0020386:95765-95784 | Msa1380670:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | tig0020386:96051-96070 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | tig0020386:96171-96190 | Msa1380670:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | tig0020386:96172-96191 | Msa1380670:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | tig0020386:96351-96370 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | tig0020386:96352-96371 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | tig0020386:96356-96375 | Msa1380670:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | tig0020386:96370-96389 | Msa1380670:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | + | tig0020386:96476-96495 | Msa1380670:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | + | tig0020386:96477-96496 | Msa1380670:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | tig0020386:96516-96535 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | tig0020386:96524-96543 | Msa1380670:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | tig0020386:96635-96654 | Msa1380670:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | tig0020386:96697-96716 | Msa1380670:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | tig0020386:96787-96806 | Msa1380670:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | - | tig0020386:96866-96885 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | + | tig0020386:96865-96884 | Msa1380670:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | - | tig0020386:96897-96916 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | + | tig0020386:96984-97003 | Msa1380670:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | tig0020386:97013-97032 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | tig0020386:97013-97032 | Msa1380670:CDS | 30.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | - | tig0020386:95264-95283 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | - | tig0020386:95352-95371 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | + | tig0020386:95355-95374 | Msa1380670:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | + | tig0020386:95381-95400 | Msa1380670:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | + | tig0020386:95492-95511 | Msa1380670:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | + | tig0020386:95629-95648 | Msa1380670:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | - | tig0020386:95796-95815 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | - | tig0020386:95797-95816 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | - | tig0020386:95804-95823 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | tig0020386:95883-95902 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | tig0020386:96071-96090 | Msa1380670:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | tig0020386:96081-96100 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | tig0020386:96107-96126 | Msa1380670:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | tig0020386:96379-96398 | Msa1380670:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | tig0020386:96403-96422 | Msa1380670:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | tig0020386:96404-96423 | Msa1380670:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | tig0020386:96470-96489 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | tig0020386:96527-96546 | Msa1380670:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | tig0020386:96531-96550 | Msa1380670:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | tig0020386:96532-96551 | Msa1380670:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | tig0020386:96559-96578 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | + | tig0020386:96572-96591 | Msa1380670:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | - | tig0020386:96583-96602 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | tig0020386:96719-96738 | Msa1380670:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | tig0020386:96753-96772 | Msa1380670:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | tig0020386:96800-96819 | Msa1380670:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | tig0020386:96930-96949 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | tig0020386:96930-96949 | Msa1380670:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | tig0020386:96983-97002 | Msa1380670:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | tig0020386:97386-97405 | Msa1380670:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | tig0020386:97399-97418 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | - | tig0020386:95264-95283 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | - | tig0020386:95352-95371 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | + | tig0020386:95355-95374 | Msa1380670:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | + | tig0020386:95381-95400 | Msa1380670:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | + | tig0020386:95492-95511 | Msa1380670:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | + | tig0020386:95629-95648 | Msa1380670:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | - | tig0020386:95796-95815 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | - | tig0020386:95797-95816 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | - | tig0020386:95804-95823 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | tig0020386:95883-95902 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | tig0020386:96071-96090 | Msa1380670:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | tig0020386:96081-96100 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | tig0020386:96107-96126 | Msa1380670:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | tig0020386:96379-96398 | Msa1380670:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | tig0020386:96403-96422 | Msa1380670:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | tig0020386:96404-96423 | Msa1380670:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | tig0020386:96470-96489 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | tig0020386:96527-96546 | Msa1380670:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | tig0020386:96531-96550 | Msa1380670:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | tig0020386:96532-96551 | Msa1380670:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | tig0020386:96559-96578 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | + | tig0020386:96572-96591 | Msa1380670:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | - | tig0020386:96583-96602 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | tig0020386:96719-96738 | Msa1380670:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | tig0020386:96753-96772 | Msa1380670:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | tig0020386:96800-96819 | Msa1380670:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | tig0020386:96930-96949 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | tig0020386:96930-96949 | Msa1380670:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | tig0020386:96983-97002 | Msa1380670:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | tig0020386:97386-97405 | Msa1380670:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | tig0020386:97399-97418 | None:intergenic | 35.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | - | tig0020386:95258-95277 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | - | tig0020386:95357-95376 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | + | tig0020386:95354-95373 | Msa1380670:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | + | tig0020386:95418-95437 | Msa1380670:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | + | tig0020386:95419-95438 | Msa1380670:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | + | tig0020386:95441-95460 | Msa1380670:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | + | tig0020386:95467-95486 | Msa1380670:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | + | tig0020386:95500-95519 | Msa1380670:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | + | tig0020386:95630-95649 | Msa1380670:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | + | tig0020386:95722-95741 | Msa1380670:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | tig0020386:95882-95901 | Msa1380670:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | tig0020386:96061-96080 | Msa1380670:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | tig0020386:96082-96101 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | tig0020386:96191-96210 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | tig0020386:96217-96236 | Msa1380670:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | tig0020386:96307-96326 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | tig0020386:96338-96357 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | tig0020386:96378-96397 | Msa1380670:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | + | tig0020386:96424-96443 | Msa1380670:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | tig0020386:96462-96481 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | tig0020386:96533-96552 | Msa1380670:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | tig0020386:96650-96669 | Msa1380670:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | tig0020386:96672-96691 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | tig0020386:96728-96747 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | tig0020386:96750-96769 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | tig0020386:96752-96771 | Msa1380670:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | tig0020386:96754-96773 | Msa1380670:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | tig0020386:96782-96801 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | tig0020386:96810-96829 | Msa1380670:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | tig0020386:96868-96887 | Msa1380670:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | tig0020386:96950-96969 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | + | tig0020386:96952-96971 | Msa1380670:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | + | tig0020386:96953-96972 | Msa1380670:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | - | tig0020386:96974-96993 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | tig0020386:96974-96993 | Msa1380670:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | tig0020386:97076-97095 | Msa1380670:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | tig0020386:97095-97114 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | tig0020386:97112-97131 | Msa1380670:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | tig0020386:97117-97136 | Msa1380670:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | tig0020386:97128-97147 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | tig0020386:97247-97266 | Msa1380670:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | + | tig0020386:97262-97281 | Msa1380670:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | tig0020386:97285-97304 | Msa1380670:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | tig0020386:97316-97335 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | tig0020386:97378-97397 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | tig0020386:97390-97409 | Msa1380670:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | - | tig0020386:95258-95277 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | - | tig0020386:95357-95376 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | + | tig0020386:95354-95373 | Msa1380670:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | + | tig0020386:95418-95437 | Msa1380670:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | + | tig0020386:95419-95438 | Msa1380670:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | + | tig0020386:95441-95460 | Msa1380670:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | + | tig0020386:95467-95486 | Msa1380670:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | + | tig0020386:95500-95519 | Msa1380670:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | + | tig0020386:95630-95649 | Msa1380670:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | + | tig0020386:95722-95741 | Msa1380670:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | tig0020386:95882-95901 | Msa1380670:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | tig0020386:96061-96080 | Msa1380670:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | tig0020386:96082-96101 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | tig0020386:96191-96210 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | tig0020386:96217-96236 | Msa1380670:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | tig0020386:96307-96326 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | tig0020386:96338-96357 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | tig0020386:96378-96397 | Msa1380670:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | + | tig0020386:96424-96443 | Msa1380670:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | tig0020386:96462-96481 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | tig0020386:96533-96552 | Msa1380670:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | tig0020386:96650-96669 | Msa1380670:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | tig0020386:96672-96691 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | tig0020386:96728-96747 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | tig0020386:96750-96769 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | tig0020386:96752-96771 | Msa1380670:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | tig0020386:96754-96773 | Msa1380670:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | tig0020386:96782-96801 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | tig0020386:96810-96829 | Msa1380670:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | tig0020386:96868-96887 | Msa1380670:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | tig0020386:96950-96969 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | + | tig0020386:96952-96971 | Msa1380670:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | + | tig0020386:96953-96972 | Msa1380670:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | - | tig0020386:96974-96993 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | tig0020386:96974-96993 | Msa1380670:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | tig0020386:97076-97095 | Msa1380670:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | tig0020386:97095-97114 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | tig0020386:97112-97131 | Msa1380670:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | tig0020386:97117-97136 | Msa1380670:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | tig0020386:97128-97147 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | tig0020386:97247-97266 | Msa1380670:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | + | tig0020386:97262-97281 | Msa1380670:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | tig0020386:97285-97304 | Msa1380670:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | tig0020386:97316-97335 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | tig0020386:97378-97397 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | tig0020386:97390-97409 | Msa1380670:CDS | 40.0% | |
| GCAGCTGTCAATATATCTCG+CGG | - | tig0020386:95057-95076 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | + | tig0020386:95056-95075 | Msa1380670:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | + | tig0020386:95069-95088 | Msa1380670:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | + | tig0020386:95384-95403 | Msa1380670:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | - | tig0020386:95453-95472 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | - | tig0020386:95477-95496 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | + | tig0020386:95483-95502 | Msa1380670:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | - | tig0020386:95487-95506 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | - | tig0020386:95520-95539 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | + | tig0020386:95519-95538 | Msa1380670:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | + | tig0020386:95662-95681 | Msa1380670:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | + | tig0020386:95665-95684 | Msa1380670:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | - | tig0020386:95702-95721 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | tig0020386:95856-95875 | Msa1380670:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | tig0020386:95887-95906 | Msa1380670:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | tig0020386:95952-95971 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | tig0020386:96176-96195 | Msa1380670:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | tig0020386:96390-96409 | Msa1380670:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | tig0020386:96440-96459 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | tig0020386:96448-96467 | Msa1380670:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | + | tig0020386:96484-96503 | Msa1380670:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | tig0020386:96499-96518 | Msa1380670:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | tig0020386:96555-96574 | Msa1380670:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | tig0020386:96651-96670 | Msa1380670:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | tig0020386:96736-96755 | Msa1380670:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | tig0020386:96749-96768 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | tig0020386:96776-96795 | Msa1380670:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | tig0020386:96783-96802 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | tig0020386:96809-96828 | Msa1380670:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | tig0020386:97116-97135 | Msa1380670:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | tig0020386:97127-97146 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | tig0020386:97129-97148 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | tig0020386:97127-97146 | Msa1380670:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | + | tig0020386:97265-97284 | Msa1380670:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | tig0020386:97304-97323 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | tig0020386:97333-97352 | Msa1380670:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | tig0020386:97339-97358 | Msa1380670:CDS | 45.0% |
| GCAGCTGTCAATATATCTCG+CGG | - | tig0020386:95057-95076 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | + | tig0020386:95056-95075 | Msa1380670:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | + | tig0020386:95069-95088 | Msa1380670:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | + | tig0020386:95384-95403 | Msa1380670:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | - | tig0020386:95453-95472 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | - | tig0020386:95477-95496 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | + | tig0020386:95483-95502 | Msa1380670:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | - | tig0020386:95487-95506 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | - | tig0020386:95520-95539 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | + | tig0020386:95519-95538 | Msa1380670:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | + | tig0020386:95662-95681 | Msa1380670:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | + | tig0020386:95665-95684 | Msa1380670:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | - | tig0020386:95702-95721 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | tig0020386:95856-95875 | Msa1380670:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | tig0020386:95887-95906 | Msa1380670:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | tig0020386:95952-95971 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | tig0020386:96176-96195 | Msa1380670:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | tig0020386:96390-96409 | Msa1380670:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | tig0020386:96440-96459 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | tig0020386:96448-96467 | Msa1380670:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | + | tig0020386:96484-96503 | Msa1380670:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | tig0020386:96499-96518 | Msa1380670:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | tig0020386:96555-96574 | Msa1380670:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | tig0020386:96651-96670 | Msa1380670:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | tig0020386:96736-96755 | Msa1380670:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | tig0020386:96749-96768 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | tig0020386:96776-96795 | Msa1380670:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | tig0020386:96783-96802 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | tig0020386:96809-96828 | Msa1380670:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | tig0020386:97116-97135 | Msa1380670:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | tig0020386:97127-97146 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | tig0020386:97129-97148 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | tig0020386:97127-97146 | Msa1380670:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | + | tig0020386:97265-97284 | Msa1380670:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | tig0020386:97304-97323 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | tig0020386:97333-97352 | Msa1380670:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | tig0020386:97339-97358 | Msa1380670:CDS | 45.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | + | tig0020386:95392-95411 | Msa1380670:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | - | tig0020386:95449-95468 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | + | tig0020386:95471-95490 | Msa1380670:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | + | tig0020386:95514-95533 | Msa1380670:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | + | tig0020386:95526-95545 | Msa1380670:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | + | tig0020386:95527-95546 | Msa1380670:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | - | tig0020386:95546-95565 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | tig0020386:95870-95889 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | tig0020386:95876-95895 | Msa1380670:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | tig0020386:95899-95918 | Msa1380670:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | tig0020386:95917-95936 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | tig0020386:95925-95944 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | tig0020386:96287-96306 | Msa1380670:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | tig0020386:96389-96408 | Msa1380670:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | tig0020386:96391-96410 | Msa1380670:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | tig0020386:96459-96478 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | tig0020386:96668-96687 | Msa1380670:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | tig0020386:96769-96788 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | tig0020386:96770-96789 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | + | tig0020386:97130-97149 | Msa1380670:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | tig0020386:97142-97161 | Msa1380670:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | tig0020386:97159-97178 | Msa1380670:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | tig0020386:97298-97317 | None:intergenic | 50.0% |
| TTTGGGTCCTGGAGGATTGA+CGG | + | tig0020386:95392-95411 | Msa1380670:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | - | tig0020386:95449-95468 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | + | tig0020386:95471-95490 | Msa1380670:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | + | tig0020386:95514-95533 | Msa1380670:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | + | tig0020386:95526-95545 | Msa1380670:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | + | tig0020386:95527-95546 | Msa1380670:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | - | tig0020386:95546-95565 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | tig0020386:95870-95889 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | tig0020386:95876-95895 | Msa1380670:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | tig0020386:95899-95918 | Msa1380670:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | tig0020386:95917-95936 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | tig0020386:95925-95944 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | tig0020386:96287-96306 | Msa1380670:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | tig0020386:96389-96408 | Msa1380670:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | tig0020386:96391-96410 | Msa1380670:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | tig0020386:96459-96478 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | tig0020386:96668-96687 | Msa1380670:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | tig0020386:96769-96788 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | tig0020386:96770-96789 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | + | tig0020386:97130-97149 | Msa1380670:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | tig0020386:97142-97161 | Msa1380670:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | tig0020386:97159-97178 | Msa1380670:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | tig0020386:97298-97317 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | + | tig0020386:95393-95412 | Msa1380670:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | + | tig0020386:95412-95431 | Msa1380670:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | + | tig0020386:95528-95547 | Msa1380670:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | + | tig0020386:95529-95548 | Msa1380670:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | tig0020386:95912-95931 | Msa1380670:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | tig0020386:95943-95962 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | tig0020386:96122-96141 | Msa1380670:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | tig0020386:96125-96144 | Msa1380670:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | tig0020386:96139-96158 | Msa1380670:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | tig0020386:96140-96159 | Msa1380670:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | tig0020386:96659-96678 | Msa1380670:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | - | tig0020386:96966-96985 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | tig0020386:97137-97156 | Msa1380670:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | tig0020386:97138-97157 | Msa1380670:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | tig0020386:97150-97169 | Msa1380670:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | tig0020386:97153-97172 | Msa1380670:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | tig0020386:97158-97177 | Msa1380670:CDS | 55.0% | |
| TTGGGTCCTGGAGGATTGAC+GGG | + | tig0020386:95393-95412 | Msa1380670:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | + | tig0020386:95412-95431 | Msa1380670:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | + | tig0020386:95528-95547 | Msa1380670:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | + | tig0020386:95529-95548 | Msa1380670:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | tig0020386:95912-95931 | Msa1380670:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | tig0020386:95943-95962 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | tig0020386:96122-96141 | Msa1380670:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | tig0020386:96125-96144 | Msa1380670:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | tig0020386:96139-96158 | Msa1380670:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | tig0020386:96140-96159 | Msa1380670:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | tig0020386:96659-96678 | Msa1380670:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | - | tig0020386:96966-96985 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | tig0020386:97137-97156 | Msa1380670:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | tig0020386:97138-97157 | Msa1380670:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | tig0020386:97150-97169 | Msa1380670:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | tig0020386:97153-97172 | Msa1380670:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | tig0020386:97158-97177 | Msa1380670:CDS | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | + | tig0020386:95394-95413 | Msa1380670:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | tig0020386:95942-95961 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | tig0020386:96542-96561 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | - | tig0020386:96965-96984 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | + | tig0020386:96962-96981 | Msa1380670:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | tig0020386:97168-97187 | Msa1380670:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | tig0020386:97169-97188 | Msa1380670:CDS | 60.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | + | tig0020386:95394-95413 | Msa1380670:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | tig0020386:95942-95961 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | tig0020386:96542-96561 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | - | tig0020386:96965-96984 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | + | tig0020386:96962-96981 | Msa1380670:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | tig0020386:97168-97187 | Msa1380670:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | tig0020386:97169-97188 | Msa1380670:CDS | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | - | tig0020386:95402-95421 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | tig0020386:95939-95958 | Msa1380670:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | tig0020386:97170-97189 | Msa1380670:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | + | tig0020386:97175-97194 | Msa1380670:CDS | 65.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | - | tig0020386:95402-95421 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | tig0020386:95939-95958 | Msa1380670:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | tig0020386:97170-97189 | Msa1380670:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | + | tig0020386:97175-97194 | Msa1380670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020386 | gene | 95003 | 97420 | 95003 | ID=Msa1380670;Name=Msa1380670 |
| tig0020386 | mRNA | 95003 | 97420 | 95003 | ID=Msa1380670-mRNA-1;Parent=Msa1380670;Name=Msa1380670-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|805 |
| tig0020386 | exon | 95003 | 97420 | 95003 | ID=Msa1380670-mRNA-1:exon:7178;Parent=Msa1380670-mRNA-1 |
| tig0020386 | CDS | 95003 | 97420 | 95003 | ID=Msa1380670-mRNA-1:cds;Parent=Msa1380670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
