Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269030 | KAF6171538.1 | 69.575 | 447 | 73 | 4 | 10 | 396 | 28 | 471 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269030 | sp|Q9BBS9|RPOB_LOTJA | 81.752 | 274 | 18 | 2 | 155 | 397 | 798 | 1070 | 3.17e-145 | 442 |
| Msa0269030 | sp|Q9BBS9|RPOB_LOTJA | 85.185 | 162 | 24 | 0 | 10 | 171 | 519 | 680 | 6.97e-89 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269030 | A0A7J7NX98 | 69.575 | 447 | 73 | 4 | 10 | 396 | 28 | 471 | 0.0 | 603 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139770 | Msa0269030 | 0.811807 | 5.820575e-51 | -8.615850e-47 |
| Msa0139790 | Msa0269030 | 0.804032 | 2.624884e-49 | -8.615850e-47 |
| Msa0139830 | Msa0269030 | 0.863360 | 2.632542e-64 | -8.615850e-47 |
| Msa0268590 | Msa0269030 | 0.827316 | 1.673573e-54 | -8.615850e-47 |
| Msa0268610 | Msa0269030 | 0.835488 | 1.629579e-56 | -8.615850e-47 |
| Msa0268820 | Msa0269030 | 0.842341 | 2.743674e-58 | -8.615850e-47 |
| Msa0269030 | Msa0344130 | 0.827644 | 1.395789e-54 | -8.615850e-47 |
| Msa0269030 | Msa0344320 | 0.803218 | 3.872308e-49 | -8.615850e-47 |
| Msa0269030 | Msa0582500 | 0.807698 | 4.450420e-50 | -8.615850e-47 |
| Msa0269030 | Msa0582670 | 0.804538 | 2.059303e-49 | -8.615850e-47 |
| Msa0269030 | Msa0582680 | 0.820146 | 8.003321e-53 | -8.615850e-47 |
| Msa0269030 | Msa0582790 | 0.811831 | 5.749358e-51 | -8.615850e-47 |
| Msa0269030 | Msa0582800 | 0.802804 | 4.714999e-49 | -8.615850e-47 |
| Msa0269030 | Msa0931060 | 0.819252 | 1.280598e-52 | -8.615850e-47 |
| Msa0269030 | Msa1086110 | 0.818662 | 1.743400e-52 | -8.615850e-47 |
| Msa0269030 | Msa1086130 | 0.833895 | 4.100966e-56 | -8.615850e-47 |
| Msa0269030 | Msa1086220 | 0.816430 | 5.554155e-52 | -8.615850e-47 |
| Msa0269030 | Msa1086930 | 0.825724 | 4.009758e-54 | -8.615850e-47 |
| Msa0269030 | Msa1143110 | 0.813488 | 2.495749e-51 | -8.615850e-47 |
| Msa0269030 | Msa1354940 | 0.827121 | 1.863129e-54 | -8.615850e-47 |
| Msa0269030 | Msa1355110 | 0.814412 | 1.561370e-51 | -8.615850e-47 |
| Msa0269030 | Msa1380630 | 0.833234 | 5.995915e-56 | -8.615850e-47 |
| Msa0269030 | Msa1380700 | 0.823548 | 1.305299e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269030 | MtrunA17_Chr4g0016641 | 84.672 | 274 | 8 | 3 | 156 | 397 | 804 | 1075 | 1.71e-151 | 455 |
| Msa0269030 | MtrunA17_Chr4g0016641 | 96.914 | 162 | 5 | 0 | 10 | 171 | 524 | 685 | 7.18e-102 | 325 |
| Msa0269030 | MtrunA17_CPg0493041 | 84.672 | 274 | 8 | 3 | 156 | 397 | 804 | 1075 | 1.71e-151 | 455 |
| Msa0269030 | MtrunA17_CPg0493041 | 96.914 | 162 | 5 | 0 | 10 | 171 | 524 | 685 | 7.18e-102 | 325 |
| Msa0269030 | MtrunA17_Chr4g0015541 | 72.381 | 210 | 3 | 2 | 219 | 397 | 1 | 186 | 3.12e-94 | 285 |
| Msa0269030 | MtrunA17_Chr4g0015531 | 87.586 | 145 | 4 | 1 | 10 | 154 | 164 | 294 | 7.45e-84 | 258 |
| Msa0269030 | MtrunA17_Chr1g0159041 | 49.416 | 257 | 99 | 8 | 10 | 238 | 54 | 307 | 3.98e-57 | 189 |
| Msa0269030 | MtrunA17_Chr7g0247561 | 93.443 | 61 | 4 | 0 | 111 | 171 | 1 | 61 | 1.81e-33 | 120 |
| Msa0269030 | MtrunA17_Chr8g0345421 | 26.202 | 416 | 215 | 10 | 11 | 338 | 657 | 1068 | 8.13e-31 | 125 |
| Msa0269030 | MtrunA17_Chr1g0155911 | 34.615 | 182 | 103 | 2 | 173 | 338 | 939 | 1120 | 9.77e-29 | 119 |
| Msa0269030 | MtrunA17_Chr4g0069391 | 30.088 | 226 | 132 | 4 | 164 | 363 | 917 | 1142 | 7.76e-21 | 95.1 |
| Msa0269030 | MtrunA17_Chr8g0375171 | 28.095 | 210 | 131 | 3 | 163 | 352 | 924 | 1133 | 3.63e-18 | 87.0 |
| Msa0269030 | MtrunA17_Chr3g0136911 | 27.570 | 214 | 135 | 3 | 159 | 352 | 922 | 1135 | 3.97e-18 | 86.7 |
| Msa0269030 | MtrunA17_Chr3g0142431 | 27.004 | 237 | 135 | 5 | 182 | 380 | 2 | 238 | 3.19e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269030 | ATCG00190.1 | 80.657 | 274 | 19 | 3 | 156 | 397 | 801 | 1072 | 6.64e-145 | 439 |
| Msa0269030 | ATCG00190.1 | 89.308 | 159 | 17 | 0 | 10 | 168 | 521 | 679 | 3.98e-92 | 299 |
| Msa0269030 | AT4G21710.1 | 31.646 | 237 | 131 | 4 | 173 | 378 | 936 | 1172 | 1.82e-30 | 124 |
| Msa0269030 | AT5G45140.2 | 31.301 | 246 | 133 | 3 | 167 | 376 | 905 | 1150 | 6.83e-29 | 119 |
| Msa0269030 | AT5G45140.1 | 31.301 | 246 | 133 | 3 | 167 | 376 | 905 | 1150 | 6.83e-29 | 119 |
| Msa0269030 | AT1G29940.1 | 28.846 | 208 | 115 | 4 | 164 | 339 | 885 | 1091 | 2.77e-19 | 90.9 |
| Msa0269030 | AT3G23780.1 | 22.996 | 474 | 250 | 16 | 17 | 381 | 699 | 1166 | 1.97e-17 | 85.1 |
| Msa0269030 | AT3G23780.2 | 22.996 | 474 | 250 | 16 | 17 | 381 | 699 | 1166 | 1.97e-17 | 85.1 |
Find 102 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 2_2:-70477816 | None:intergenic |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | 2_2:+70477802 | Msa0269030:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 2_2:-70477617 | None:intergenic |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | 2_2:-70476722 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 2_2:+70477703 | Msa0269030:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | 2_2:-70477730 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 2_2:-70477417 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 2_2:-70477815 | None:intergenic |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | 2_2:-70476497 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 2_2:-70477459 | None:intergenic |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 2_2:-70477661 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 2_2:+70476608 | Msa0269030:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 2_2:+70476835 | Msa0269030:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | 2_2:-70476775 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 2_2:-70476645 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 2_2:+70477673 | Msa0269030:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 2_2:+70477479 | Msa0269030:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 2_2:-70478086 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 2_2:-70477985 | None:intergenic |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 2_2:-70478003 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 2_2:+70477445 | Msa0269030:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 2_2:+70476552 | Msa0269030:CDS |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | 2_2:+70477952 | Msa0269030:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 2_2:+70476572 | Msa0269030:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 2_2:-70476618 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 2_2:+70478023 | Msa0269030:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 2_2:-70476490 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 2_2:-70477653 | None:intergenic |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 2_2:+70477501 | Msa0269030:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | 2_2:+70477642 | Msa0269030:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 2_2:+70477444 | Msa0269030:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 2_2:+70477865 | Msa0269030:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 2_2:+70476836 | Msa0269030:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 2_2:+70477428 | Msa0269030:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 2_2:+70476419 | None:intergenic |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 2_2:+70476578 | Msa0269030:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 2_2:+70477859 | Msa0269030:CDS |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 2_2:+70477360 | Msa0269030:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 2_2:-70477458 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 2_2:-70477700 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | 2_2:+70477840 | Msa0269030:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 2_2:-70477361 | None:intergenic |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 2_2:+70477858 | Msa0269030:CDS |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | 2_2:+70477849 | Msa0269030:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | 2_2:+70477848 | Msa0269030:CDS |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 2_2:+70477664 | Msa0269030:CDS |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 2_2:-70477652 | None:intergenic |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 2_2:+70477828 | Msa0269030:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 2_2:-70476635 | None:intergenic |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | 2_2:+70477754 | Msa0269030:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 2_2:+70476583 | Msa0269030:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 2_2:+70477860 | Msa0269030:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 2_2:-70476610 | None:intergenic |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 2_2:+70476913 | Msa0269030:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 2_2:+70478029 | Msa0269030:CDS |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 2_2:+70477411 | Msa0269030:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 2_2:+70476867 | Msa0269030:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 2_2:+70477620 | Msa0269030:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 2_2:+70477327 | Msa0269030:intron |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 2_2:+70477342 | Msa0269030:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | 2_2:-70476774 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 2_2:-70477991 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 2_2:+70476818 | Msa0269030:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 2_2:+70477351 | Msa0269030:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 2_2:+70478076 | Msa0269030:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 2_2:-70477438 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 2_2:+70477806 | Msa0269030:CDS |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 2_2:-70477637 | None:intergenic |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 2_2:-70476636 | None:intergenic |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 2_2:+70477492 | Msa0269030:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 2_2:+70476821 | Msa0269030:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | 2_2:+70477955 | Msa0269030:CDS |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 2_2:+70478080 | Msa0269030:CDS |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 2_2:-70478065 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 2_2:-70477782 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 2_2:-70477814 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 2_2:+70477502 | Msa0269030:CDS |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 2_2:+70477817 | Msa0269030:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 2_2:+70477338 | Msa0269030:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 2_2:+70477643 | Msa0269030:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 2_2:-70477472 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 2_2:+70477652 | Msa0269030:CDS |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 2_2:-70476489 | None:intergenic |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 2_2:-70476884 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 2_2:+70476868 | Msa0269030:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 2_2:+70477343 | Msa0269030:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 2_2:+70477827 | Msa0269030:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 2_2:+70476872 | Msa0269030:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 2_2:-70477471 | None:intergenic |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | 2_2:+70477766 | Msa0269030:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 2_2:+70476595 | Msa0269030:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 2_2:+70477468 | Msa0269030:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 2_2:-70477439 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | 2_2:+70477832 | Msa0269030:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 2_2:+70477807 | Msa0269030:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | 2_2:+70477975 | Msa0269030:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 2_2:+70477937 | Msa0269030:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | 2_2:+70477843 | Msa0269030:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 2_2:+70477446 | Msa0269030:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 2_2:+70476635 | Msa0269030:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 2_2:+70477674 | Msa0269030:CDS |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 2_2:+70477820 | Msa0269030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | - | chr2_2:70477733-70477752 | None:intergenic | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | - | chr2_2:70477733-70477752 | None:intergenic | 15.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | chr2_2:70476683-70476702 | Msa0269030:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | chr2_2:70476684-70476703 | Msa0269030:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr2_2:70477010-70477029 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr2_2:70477056-70477075 | None:intergenic | 20.0% |
| !! | AATTATATATGAATCGTTTC+TGG | - | chr2_2:70477304-70477323 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | + | chr2_2:70476683-70476702 | Msa0269030:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | + | chr2_2:70476684-70476703 | Msa0269030:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr2_2:70477010-70477029 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr2_2:70477056-70477075 | None:intergenic | 20.0% |
| !! | AATTATATATGAATCGTTTC+TGG | - | chr2_2:70477304-70477323 | None:intergenic | 20.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | - | chr2_2:70476464-70476483 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | - | chr2_2:70476465-70476484 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | - | chr2_2:70476469-70476488 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | chr2_2:70476677-70476696 | Msa0269030:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | chr2_2:70476725-70476744 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr2_2:70476784-70476803 | Msa0269030:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr2_2:70476785-70476804 | Msa0269030:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | chr2_2:70477066-70477085 | Msa0269030:intron | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | chr2_2:70477338-70477357 | Msa0269030:CDS | 25.0% |
| !! | ATTCAGAAAACAAAGTTTTC+TGG | - | chr2_2:70477588-70477607 | None:intergenic | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | chr2_2:70477715-70477734 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | chr2_2:70477754-70477773 | Msa0269030:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | - | chr2_2:70476464-70476483 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | - | chr2_2:70476465-70476484 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | - | chr2_2:70476469-70476488 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | + | chr2_2:70476677-70476696 | Msa0269030:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | - | chr2_2:70476725-70476744 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr2_2:70476784-70476803 | Msa0269030:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr2_2:70476785-70476804 | Msa0269030:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | + | chr2_2:70477066-70477085 | Msa0269030:intron | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | + | chr2_2:70477338-70477357 | Msa0269030:CDS | 25.0% |
| !! | ATTCAGAAAACAAAGTTTTC+TGG | - | chr2_2:70477588-70477607 | None:intergenic | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | - | chr2_2:70477715-70477734 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | + | chr2_2:70477754-70477773 | Msa0269030:CDS | 25.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | + | chr2_2:70476461-70476480 | Msa0269030:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | chr2_2:70476747-70476766 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | chr2_2:70476867-70476886 | Msa0269030:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | chr2_2:70476868-70476887 | Msa0269030:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | chr2_2:70477046-70477065 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | chr2_2:70477047-70477066 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | chr2_2:70477051-70477070 | Msa0269030:intron | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | chr2_2:70477065-70477084 | Msa0269030:intron | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | + | chr2_2:70477170-70477189 | Msa0269030:intron | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | + | chr2_2:70477171-70477190 | Msa0269030:intron | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr2_2:70477210-70477229 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | chr2_2:70477218-70477237 | Msa0269030:intron | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | chr2_2:70477327-70477346 | Msa0269030:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr2_2:70477389-70477408 | Msa0269030:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | chr2_2:70477479-70477498 | Msa0269030:CDS | 30.0% | |
| GAATATTTGATGGAAGAACA+GGG | + | chr2_2:70477674-70477693 | Msa0269030:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | chr2_2:70477703-70477722 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | chr2_2:70477703-70477722 | Msa0269030:CDS | 30.0% | |
| ! | CCCTTCCAATATTTTTCTAT+TGG | + | chr2_2:70476461-70476480 | Msa0269030:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | - | chr2_2:70476747-70476766 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | + | chr2_2:70476867-70476886 | Msa0269030:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | + | chr2_2:70476868-70476887 | Msa0269030:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | - | chr2_2:70477046-70477065 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | - | chr2_2:70477047-70477066 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | + | chr2_2:70477051-70477070 | Msa0269030:intron | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | + | chr2_2:70477065-70477084 | Msa0269030:intron | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | + | chr2_2:70477170-70477189 | Msa0269030:intron | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | + | chr2_2:70477171-70477190 | Msa0269030:intron | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr2_2:70477210-70477229 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | + | chr2_2:70477218-70477237 | Msa0269030:intron | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | + | chr2_2:70477327-70477346 | Msa0269030:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr2_2:70477389-70477408 | Msa0269030:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | + | chr2_2:70477479-70477498 | Msa0269030:CDS | 30.0% | |
| GAATATTTGATGGAAGAACA+GGG | + | chr2_2:70477674-70477693 | Msa0269030:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | - | chr2_2:70477703-70477722 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | + | chr2_2:70477703-70477722 | Msa0269030:CDS | 30.0% | |
| ATGCTCGATAAAAGGAATCA+GGG | - | chr2_2:70476492-70476511 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | - | chr2_2:70476493-70476512 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | - | chr2_2:70476500-70476519 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | chr2_2:70476579-70476598 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | chr2_2:70476767-70476786 | Msa0269030:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | chr2_2:70476777-70476796 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | chr2_2:70476803-70476822 | Msa0269030:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | chr2_2:70477074-70477093 | Msa0269030:intron | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | chr2_2:70477098-70477117 | Msa0269030:intron | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | chr2_2:70477099-70477118 | Msa0269030:intron | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | chr2_2:70477164-70477183 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | chr2_2:70477221-70477240 | Msa0269030:intron | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | chr2_2:70477225-70477244 | Msa0269030:intron | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | chr2_2:70477226-70477245 | Msa0269030:intron | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | chr2_2:70477253-70477272 | None:intergenic | 35.0% | |
| !!! | TAGCTAGAACCTGCTTTTTT+TGG | - | chr2_2:70477277-70477296 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | chr2_2:70477411-70477430 | Msa0269030:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | chr2_2:70477445-70477464 | Msa0269030:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | chr2_2:70477492-70477511 | Msa0269030:CDS | 35.0% | |
| CTGTTCATATCTCTCATCAA+AGG | - | chr2_2:70477558-70477577 | None:intergenic | 35.0% | |
| CTTTGATGAGAGATATGAAC+AGG | + | chr2_2:70477556-70477575 | Msa0269030:intron | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | chr2_2:70477620-70477639 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | chr2_2:70477620-70477639 | Msa0269030:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | chr2_2:70477673-70477692 | Msa0269030:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | chr2_2:70478076-70478095 | Msa0269030:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | chr2_2:70478089-70478108 | None:intergenic | 35.0% | |
| ATGCTCGATAAAAGGAATCA+GGG | - | chr2_2:70476492-70476511 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | - | chr2_2:70476493-70476512 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | - | chr2_2:70476500-70476519 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | - | chr2_2:70476579-70476598 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | + | chr2_2:70476767-70476786 | Msa0269030:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | - | chr2_2:70476777-70476796 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | + | chr2_2:70476803-70476822 | Msa0269030:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | + | chr2_2:70477074-70477093 | Msa0269030:intron | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | + | chr2_2:70477098-70477117 | Msa0269030:intron | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | + | chr2_2:70477099-70477118 | Msa0269030:intron | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | - | chr2_2:70477164-70477183 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | + | chr2_2:70477221-70477240 | Msa0269030:intron | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | + | chr2_2:70477225-70477244 | Msa0269030:intron | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | + | chr2_2:70477226-70477245 | Msa0269030:intron | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | - | chr2_2:70477253-70477272 | None:intergenic | 35.0% | |
| !!! | TAGCTAGAACCTGCTTTTTT+TGG | - | chr2_2:70477277-70477296 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | + | chr2_2:70477411-70477430 | Msa0269030:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | + | chr2_2:70477445-70477464 | Msa0269030:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | + | chr2_2:70477492-70477511 | Msa0269030:CDS | 35.0% | |
| CTGTTCATATCTCTCATCAA+AGG | - | chr2_2:70477558-70477577 | None:intergenic | 35.0% | |
| CTTTGATGAGAGATATGAAC+AGG | + | chr2_2:70477556-70477575 | Msa0269030:intron | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | - | chr2_2:70477620-70477639 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | + | chr2_2:70477620-70477639 | Msa0269030:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | + | chr2_2:70477673-70477692 | Msa0269030:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | + | chr2_2:70478076-70478095 | Msa0269030:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | - | chr2_2:70478089-70478108 | None:intergenic | 35.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr2_2:70476578-70476597 | Msa0269030:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | chr2_2:70476757-70476776 | Msa0269030:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | chr2_2:70476778-70476797 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | chr2_2:70476887-70476906 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | chr2_2:70476913-70476932 | Msa0269030:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | chr2_2:70477003-70477022 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | chr2_2:70477033-70477052 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | chr2_2:70477073-70477092 | Msa0269030:intron | 40.0% |
| TGGGTAATTAACGCCTCAAA+TGG | + | chr2_2:70477118-70477137 | Msa0269030:intron | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | chr2_2:70477156-70477175 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | chr2_2:70477227-70477246 | Msa0269030:intron | 40.0% | |
| GAGATGGATCCAAAAAAAGC+AGG | + | chr2_2:70477265-70477284 | Msa0269030:intron | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | chr2_2:70477342-70477361 | Msa0269030:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | chr2_2:70477364-70477383 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | chr2_2:70477420-70477439 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | chr2_2:70477442-70477461 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | chr2_2:70477444-70477463 | Msa0269030:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | chr2_2:70477446-70477465 | Msa0269030:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | chr2_2:70477474-70477493 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | chr2_2:70477502-70477521 | Msa0269030:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | chr2_2:70477559-70477578 | Msa0269030:intron | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | chr2_2:70477640-70477659 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | + | chr2_2:70477642-70477661 | Msa0269030:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | + | chr2_2:70477643-70477662 | Msa0269030:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | - | chr2_2:70477664-70477683 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | chr2_2:70477664-70477683 | Msa0269030:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | chr2_2:70477766-70477785 | Msa0269030:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | chr2_2:70477785-70477804 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | chr2_2:70477802-70477821 | Msa0269030:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | chr2_2:70477807-70477826 | Msa0269030:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | chr2_2:70477818-70477837 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr2_2:70477937-70477956 | Msa0269030:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | + | chr2_2:70477952-70477971 | Msa0269030:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | chr2_2:70477975-70477994 | Msa0269030:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | chr2_2:70478006-70478025 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | chr2_2:70478068-70478087 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | chr2_2:70478080-70478099 | Msa0269030:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr2_2:70476578-70476597 | Msa0269030:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | + | chr2_2:70476757-70476776 | Msa0269030:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | - | chr2_2:70476778-70476797 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | - | chr2_2:70476887-70476906 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | + | chr2_2:70476913-70476932 | Msa0269030:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | - | chr2_2:70477003-70477022 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | - | chr2_2:70477033-70477052 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | + | chr2_2:70477073-70477092 | Msa0269030:intron | 40.0% |
| TGGGTAATTAACGCCTCAAA+TGG | + | chr2_2:70477118-70477137 | Msa0269030:intron | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | - | chr2_2:70477156-70477175 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | + | chr2_2:70477227-70477246 | Msa0269030:intron | 40.0% | |
| GAGATGGATCCAAAAAAAGC+AGG | + | chr2_2:70477265-70477284 | Msa0269030:intron | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | + | chr2_2:70477342-70477361 | Msa0269030:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | - | chr2_2:70477364-70477383 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | - | chr2_2:70477420-70477439 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | - | chr2_2:70477442-70477461 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | + | chr2_2:70477444-70477463 | Msa0269030:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | + | chr2_2:70477446-70477465 | Msa0269030:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | - | chr2_2:70477474-70477493 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | + | chr2_2:70477502-70477521 | Msa0269030:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | + | chr2_2:70477559-70477578 | Msa0269030:intron | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | - | chr2_2:70477640-70477659 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | + | chr2_2:70477642-70477661 | Msa0269030:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | + | chr2_2:70477643-70477662 | Msa0269030:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | - | chr2_2:70477664-70477683 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | + | chr2_2:70477664-70477683 | Msa0269030:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | + | chr2_2:70477766-70477785 | Msa0269030:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | - | chr2_2:70477785-70477804 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | + | chr2_2:70477802-70477821 | Msa0269030:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | + | chr2_2:70477807-70477826 | Msa0269030:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | - | chr2_2:70477818-70477837 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr2_2:70477937-70477956 | Msa0269030:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | + | chr2_2:70477952-70477971 | Msa0269030:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | + | chr2_2:70477975-70477994 | Msa0269030:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | - | chr2_2:70478006-70478025 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | - | chr2_2:70478068-70478087 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | + | chr2_2:70478080-70478099 | Msa0269030:CDS | 40.0% | |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | chr2_2:70476552-70476571 | Msa0269030:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | chr2_2:70476583-70476602 | Msa0269030:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | chr2_2:70476648-70476667 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | chr2_2:70476872-70476891 | Msa0269030:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | chr2_2:70477085-70477104 | Msa0269030:intron | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | chr2_2:70477134-70477153 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | chr2_2:70477142-70477161 | Msa0269030:intron | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | + | chr2_2:70477178-70477197 | Msa0269030:intron | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | chr2_2:70477193-70477212 | Msa0269030:intron | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | chr2_2:70477249-70477268 | Msa0269030:intron | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | chr2_2:70477343-70477362 | Msa0269030:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | chr2_2:70477428-70477447 | Msa0269030:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | chr2_2:70477441-70477460 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | chr2_2:70477468-70477487 | Msa0269030:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | chr2_2:70477475-70477494 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | chr2_2:70477501-70477520 | Msa0269030:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | chr2_2:70477806-70477825 | Msa0269030:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | chr2_2:70477817-70477836 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | chr2_2:70477819-70477838 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | chr2_2:70477817-70477836 | Msa0269030:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | + | chr2_2:70477955-70477974 | Msa0269030:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | chr2_2:70477994-70478013 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | chr2_2:70478023-70478042 | Msa0269030:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | chr2_2:70478029-70478048 | Msa0269030:CDS | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | + | chr2_2:70476552-70476571 | Msa0269030:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | + | chr2_2:70476583-70476602 | Msa0269030:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | - | chr2_2:70476648-70476667 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | + | chr2_2:70476872-70476891 | Msa0269030:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | + | chr2_2:70477085-70477104 | Msa0269030:intron | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | - | chr2_2:70477134-70477153 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | + | chr2_2:70477142-70477161 | Msa0269030:intron | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | + | chr2_2:70477178-70477197 | Msa0269030:intron | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | + | chr2_2:70477193-70477212 | Msa0269030:intron | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | + | chr2_2:70477249-70477268 | Msa0269030:intron | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | + | chr2_2:70477343-70477362 | Msa0269030:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | + | chr2_2:70477428-70477447 | Msa0269030:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | - | chr2_2:70477441-70477460 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | + | chr2_2:70477468-70477487 | Msa0269030:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | - | chr2_2:70477475-70477494 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | + | chr2_2:70477501-70477520 | Msa0269030:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | + | chr2_2:70477806-70477825 | Msa0269030:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | - | chr2_2:70477817-70477836 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | - | chr2_2:70477819-70477838 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | + | chr2_2:70477817-70477836 | Msa0269030:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | + | chr2_2:70477955-70477974 | Msa0269030:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | - | chr2_2:70477994-70478013 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | + | chr2_2:70478023-70478042 | Msa0269030:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | + | chr2_2:70478029-70478048 | Msa0269030:CDS | 45.0% |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | chr2_2:70476566-70476585 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr2_2:70476572-70476591 | Msa0269030:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | chr2_2:70476595-70476614 | Msa0269030:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | chr2_2:70476613-70476632 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | chr2_2:70476621-70476640 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | chr2_2:70476983-70477002 | Msa0269030:intron | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | chr2_2:70477084-70477103 | Msa0269030:intron | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | chr2_2:70477086-70477105 | Msa0269030:intron | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | chr2_2:70477153-70477172 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | chr2_2:70477360-70477379 | Msa0269030:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr2_2:70477461-70477480 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr2_2:70477462-70477481 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | + | chr2_2:70477820-70477839 | Msa0269030:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | chr2_2:70477832-70477851 | Msa0269030:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | chr2_2:70477849-70477868 | Msa0269030:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | chr2_2:70477988-70478007 | None:intergenic | 50.0% |
| ! | CACTTTTCGGACCGAGAAAG+AGG | - | chr2_2:70476566-70476585 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr2_2:70476572-70476591 | Msa0269030:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | + | chr2_2:70476595-70476614 | Msa0269030:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | - | chr2_2:70476613-70476632 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | - | chr2_2:70476621-70476640 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | + | chr2_2:70476983-70477002 | Msa0269030:intron | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | + | chr2_2:70477084-70477103 | Msa0269030:intron | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | + | chr2_2:70477086-70477105 | Msa0269030:intron | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | - | chr2_2:70477153-70477172 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | + | chr2_2:70477360-70477379 | Msa0269030:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr2_2:70477461-70477480 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr2_2:70477462-70477481 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | + | chr2_2:70477820-70477839 | Msa0269030:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | + | chr2_2:70477832-70477851 | Msa0269030:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | + | chr2_2:70477849-70477868 | Msa0269030:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | - | chr2_2:70477988-70478007 | None:intergenic | 50.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr2_2:70476608-70476627 | Msa0269030:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | chr2_2:70476639-70476658 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | chr2_2:70476818-70476837 | Msa0269030:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | chr2_2:70476821-70476840 | Msa0269030:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | chr2_2:70476835-70476854 | Msa0269030:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | chr2_2:70476836-70476855 | Msa0269030:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | chr2_2:70477351-70477370 | Msa0269030:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | - | chr2_2:70477656-70477675 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | chr2_2:70477827-70477846 | Msa0269030:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | chr2_2:70477828-70477847 | Msa0269030:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | chr2_2:70477840-70477859 | Msa0269030:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | chr2_2:70477843-70477862 | Msa0269030:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | chr2_2:70477848-70477867 | Msa0269030:CDS | 55.0% | |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr2_2:70476608-70476627 | Msa0269030:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | - | chr2_2:70476639-70476658 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | + | chr2_2:70476818-70476837 | Msa0269030:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | + | chr2_2:70476821-70476840 | Msa0269030:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | + | chr2_2:70476835-70476854 | Msa0269030:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | + | chr2_2:70476836-70476855 | Msa0269030:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | + | chr2_2:70477351-70477370 | Msa0269030:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | - | chr2_2:70477656-70477675 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | + | chr2_2:70477827-70477846 | Msa0269030:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | + | chr2_2:70477828-70477847 | Msa0269030:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | + | chr2_2:70477840-70477859 | Msa0269030:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | + | chr2_2:70477843-70477862 | Msa0269030:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | + | chr2_2:70477848-70477867 | Msa0269030:CDS | 55.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | chr2_2:70476638-70476657 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | chr2_2:70477236-70477255 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | - | chr2_2:70477655-70477674 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | + | chr2_2:70477652-70477671 | Msa0269030:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | chr2_2:70477858-70477877 | Msa0269030:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | chr2_2:70477859-70477878 | Msa0269030:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | - | chr2_2:70476638-70476657 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | - | chr2_2:70477236-70477255 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | - | chr2_2:70477655-70477674 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | + | chr2_2:70477652-70477671 | Msa0269030:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | + | chr2_2:70477858-70477877 | Msa0269030:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | + | chr2_2:70477859-70477878 | Msa0269030:CDS | 60.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | chr2_2:70476635-70476654 | Msa0269030:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | chr2_2:70477860-70477879 | Msa0269030:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | + | chr2_2:70477865-70477884 | Msa0269030:CDS | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | + | chr2_2:70476635-70476654 | Msa0269030:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | + | chr2_2:70477860-70477879 | Msa0269030:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | + | chr2_2:70477865-70477884 | Msa0269030:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70476431 | 70478110 | 70476431 | ID=Msa0269030;Name=Msa0269030 |
| chr2_2 | mRNA | 70476431 | 70478110 | 70476431 | ID=Msa0269030-mRNA-1;Parent=Msa0269030;Name=Msa0269030-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0.5|0.66|3|0|397 |
| chr2_2 | exon | 70476431 | 70476934 | 70476431 | ID=Msa0269030-mRNA-1:exon:22718;Parent=Msa0269030-mRNA-1 |
| chr2_2 | exon | 70477330 | 70477525 | 70477330 | ID=Msa0269030-mRNA-1:exon:22719;Parent=Msa0269030-mRNA-1 |
| chr2_2 | exon | 70477617 | 70478110 | 70477617 | ID=Msa0269030-mRNA-1:exon:22720;Parent=Msa0269030-mRNA-1 |
| chr2_2 | CDS | 70476431 | 70476934 | 70476431 | ID=Msa0269030-mRNA-1:cds;Parent=Msa0269030-mRNA-1 |
| chr2_2 | CDS | 70477330 | 70477525 | 70477330 | ID=Msa0269030-mRNA-1:cds;Parent=Msa0269030-mRNA-1 |
| chr2_2 | CDS | 70477617 | 70478110 | 70477617 | ID=Msa0269030-mRNA-1:cds;Parent=Msa0269030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
