Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1143110 | YP_009327948.1 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1143110 | sp|Q9BBS9|RPOB_LOTJA | 92.919 | 805 | 57 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1556 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1143110 | A0A1J0I0H8 | 100.000 | 805 | 0 | 0 | 1 | 805 | 266 | 1070 | 0.0 | 1659 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0095280 | Msa1143110 | 0.822190 | 2.704201e-53 | -8.615850e-47 |
Msa0139770 | Msa1143110 | 0.812267 | 4.619166e-51 | -8.615850e-47 |
Msa0139790 | Msa1143110 | 0.839469 | 1.555536e-57 | -8.615850e-47 |
Msa0139830 | Msa1143110 | 0.842477 | 2.525588e-58 | -8.615850e-47 |
Msa0983690 | Msa1143110 | 0.804556 | 2.041431e-49 | -8.615850e-47 |
Msa1086110 | Msa1143110 | 0.847996 | 8.119642e-60 | -8.615850e-47 |
Msa1086130 | Msa1143110 | 0.872488 | 3.061487e-67 | -8.615850e-47 |
Msa1086220 | Msa1143110 | 0.855159 | 7.606199e-62 | -8.615850e-47 |
Msa1086240 | Msa1143110 | 0.823200 | 1.574298e-53 | -8.615850e-47 |
Msa1086430 | Msa1143110 | 0.801137 | 1.037876e-48 | -8.615850e-47 |
Msa1086930 | Msa1143110 | 0.829600 | 4.702311e-55 | -8.615850e-47 |
Msa0268430 | Msa1143110 | 0.804808 | 1.808242e-49 | -8.615850e-47 |
Msa0268590 | Msa1143110 | 0.815565 | 8.662582e-52 | -8.615850e-47 |
Msa0268610 | Msa1143110 | 0.849839 | 2.498147e-60 | -8.615850e-47 |
Msa0268820 | Msa1143110 | 0.837336 | 5.518564e-57 | -8.615850e-47 |
Msa0269030 | Msa1143110 | 0.813488 | 2.495749e-51 | -8.615850e-47 |
Msa0269070 | Msa1143110 | 0.801709 | 7.922090e-49 | -8.615850e-47 |
Msa0344130 | Msa1143110 | 0.807196 | 5.687692e-50 | -8.615850e-47 |
Msa0344320 | Msa1143110 | 0.832018 | 1.200613e-55 | -8.615850e-47 |
Msa1143110 | Msa1143190 | 0.817381 | 3.395623e-52 | -8.615850e-47 |
Msa1143110 | Msa1305100 | 0.828621 | 8.119671e-55 | -8.615850e-47 |
Msa1143110 | Msa1305150 | 0.843003 | 1.830165e-58 | -8.615850e-47 |
Msa1143110 | Msa1342050 | 0.821376 | 4.173848e-53 | -8.615850e-47 |
Msa1143110 | Msa1354860 | 0.815194 | 1.047497e-51 | -8.615850e-47 |
Msa1143110 | Msa1354880 | 0.802301 | 5.987099e-49 | -8.615850e-47 |
Msa1143110 | Msa1354940 | 0.853509 | 2.280680e-61 | -8.615850e-47 |
Msa1143110 | Msa1355030 | 0.800224 | 1.593301e-48 | -8.615850e-47 |
Msa1143110 | Msa1355110 | 0.859485 | 4.004906e-63 | -8.615850e-47 |
Msa1143110 | Msa1380630 | 0.834222 | 3.395551e-56 | -8.615850e-47 |
Msa1143110 | Msa1380670 | 0.814400 | 1.570578e-51 | -8.615850e-47 |
Msa1143110 | Msa1380700 | 0.836058 | 1.168694e-56 | -8.615850e-47 |
Msa1143110 | Msa1394120 | 0.800568 | 1.355728e-48 | -8.615850e-47 |
Msa0484000 | Msa1143110 | 0.839847 | 1.240630e-57 | -8.615850e-47 |
Msa0582500 | Msa1143110 | 0.862221 | 5.908354e-64 | -8.615850e-47 |
Msa0582670 | Msa1143110 | 0.825226 | 5.261109e-54 | -8.615850e-47 |
Msa0582680 | Msa1143110 | 0.862137 | 6.272022e-64 | -8.615850e-47 |
Msa0582790 | Msa1143110 | 0.834841 | 2.374057e-56 | -8.615850e-47 |
Msa0582800 | Msa1143110 | 0.857959 | 1.143463e-62 | -8.615850e-47 |
Msa0931060 | Msa1143110 | 0.847803 | 9.174812e-60 | -8.615850e-47 |
Msa0931110 | Msa1143110 | 0.803732 | 3.029753e-49 | -8.615850e-47 |
Msa0931120 | Msa1143110 | 0.853462 | 2.352017e-61 | -8.615850e-47 |
Msa0931180 | Msa1143110 | 0.805578 | 1.247736e-49 | -8.615850e-47 |
Msa0931250 | Msa1143110 | 0.813206 | 2.878396e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1143110 | MtrunA17_Chr4g0016641 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
Msa1143110 | MtrunA17_CPg0493041 | 99.379 | 805 | 5 | 0 | 1 | 805 | 271 | 1075 | 0.0 | 1645 |
Msa1143110 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 31 | 398 | 1 | 294 | 0.0 | 562 |
Msa1143110 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 201 | 630 | 1 | 322 | 0.0 | 538 |
Msa1143110 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 596 | 805 | 1 | 186 | 9.08e-121 | 366 |
Msa1143110 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 4 | 108 | 12 | 116 | 1.28e-61 | 203 |
Msa1143110 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 355 | 432 | 1 | 78 | 7.57e-47 | 161 |
Msa1143110 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 383 | 786 | 728 | 1123 | 7.76e-37 | 149 |
Msa1143110 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 383 | 746 | 782 | 1120 | 3.47e-35 | 144 |
Msa1143110 | MtrunA17_Chr3g0136911 | 25.147 | 509 | 293 | 17 | 317 | 788 | 724 | 1181 | 5.11e-28 | 121 |
Msa1143110 | MtrunA17_Chr8g0375171 | 24.754 | 509 | 295 | 17 | 317 | 788 | 722 | 1179 | 1.34e-27 | 120 |
Msa1143110 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 383 | 771 | 786 | 1142 | 3.11e-27 | 119 |
Msa1143110 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 559 | 788 | 2 | 238 | 6.21e-18 | 84.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1143110 | ATCG00190.1 | 90.458 | 807 | 75 | 1 | 1 | 805 | 266 | 1072 | 0.0 | 1524 |
Msa1143110 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 383 | 786 | 779 | 1172 | 1.86e-37 | 152 |
Msa1143110 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
Msa1143110 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 383 | 784 | 754 | 1150 | 4.12e-35 | 144 |
Msa1143110 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 387 | 747 | 756 | 1091 | 1.86e-25 | 114 |
Msa1143110 | AT3G23780.1 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
Msa1143110 | AT3G23780.2 | 24.036 | 441 | 254 | 9 | 387 | 789 | 769 | 1166 | 5.63e-25 | 112 |
Msa1143110 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 387 | 789 | 651 | 1049 | 1.87e-24 | 110 |
Msa1143110 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 4.17e-13 | 73.9 |
Msa1143110 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 387 | 606 | 651 | 847 | 5.37e-13 | 73.6 |
Find 189 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 7_4:+18324663 | Msa1143110:CDS |
TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 7_4:-18325638 | None:intergenic |
CATTTGATTGGAATGAAATT+TGG | 0.153768 | 7_4:+18324370 | Msa1143110:CDS |
CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 7_4:-18326415 | None:intergenic |
GTTACACAACAACCCCTTAA+AGG | 0.212213 | 7_4:+18326401 | Msa1143110:CDS |
TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 7_4:-18326216 | None:intergenic |
ATATATATATGAATCGTTTC+TGG | 0.228166 | 7_4:-18325897 | None:intergenic |
GAACGTTGATATCTAATTAA+TGG | 0.244746 | 7_4:-18325315 | None:intergenic |
TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 7_4:+18326302 | Msa1143110:CDS |
TGAATTAATTTCAAGATATA+AGG | 0.248171 | 7_4:-18326329 | None:intergenic |
GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 7_4:+18324781 | Msa1143110:CDS |
ACGAGCTATACTTGGGATTC+AGG | 0.269809 | 7_4:+18325773 | Msa1143110:CDS |
AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 7_4:+18324951 | Msa1143110:CDS |
GATCTATTACAAGATCAATT+TGG | 0.270369 | 7_4:+18324451 | Msa1143110:CDS |
GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 7_4:-18324574 | None:intergenic |
CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 7_4:-18324613 | None:intergenic |
GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 7_4:-18326014 | None:intergenic |
TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 7_4:-18326414 | None:intergenic |
ATAATTCGAGGAACTATATC+TGG | 0.305120 | 7_4:+18324499 | Msa1143110:CDS |
GCATCATTATGCTCGATAAA+AGG | 0.305503 | 7_4:-18325090 | None:intergenic |
ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 7_4:-18326056 | None:intergenic |
GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 7_4:+18324664 | Msa1143110:CDS |
TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 7_4:-18326260 | None:intergenic |
CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 7_4:+18325201 | Msa1143110:CDS |
TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 7_4:+18325428 | Msa1143110:CDS |
CGCATTTACCTTTATGAACC+TGG | 0.329782 | 7_4:-18325368 | None:intergenic |
AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 7_4:-18325238 | None:intergenic |
GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 7_4:+18326272 | Msa1143110:CDS |
AATGAATGTAGGACAGATAT+TGG | 0.340082 | 7_4:+18326076 | Msa1143110:CDS |
AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 7_4:-18326685 | None:intergenic |
TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 7_4:-18326584 | None:intergenic |
TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 7_4:+18324816 | Msa1143110:CDS |
ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 7_4:-18326602 | None:intergenic |
ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 7_4:+18326042 | Msa1143110:CDS |
GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 7_4:+18325145 | Msa1143110:CDS |
CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 7_4:+18325678 | Msa1143110:CDS |
CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 7_4:-18324643 | None:intergenic |
GTACTCGGAACTACGATTAT+TGG | 0.356639 | 7_4:+18326551 | Msa1143110:CDS |
CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 7_4:+18325165 | Msa1143110:CDS |
AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 7_4:-18325211 | None:intergenic |
CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 7_4:+18326622 | Msa1143110:CDS |
TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 7_4:-18325083 | None:intergenic |
TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 7_4:-18326252 | None:intergenic |
TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 7_4:+18324682 | Msa1143110:CDS |
GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 7_4:+18326098 | Msa1143110:CDS |
ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | 7_4:+18324358 | Msa1143110:CDS |
GATATTTGAACCCGAGTATC+CGG | 0.389575 | 7_4:+18326241 | Msa1143110:CDS |
GATATGGTCTTCAACCCATT+AGG | 0.395616 | 7_4:+18326041 | Msa1143110:CDS |
GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 7_4:+18326464 | Msa1143110:CDS |
GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 7_4:+18325429 | Msa1143110:CDS |
AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 7_4:+18326025 | Msa1143110:CDS |
ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 7_4:-18324763 | None:intergenic |
AGATTATTACGAGCTATACT+TGG | 0.409704 | 7_4:+18325765 | Msa1143110:CDS |
TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 7_4:+18324789 | Msa1143110:CDS |
TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 7_4:+18325011 | Msa1143110:CDS |
GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 7_4:+18325171 | Msa1143110:CDS |
TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 7_4:+18324815 | Msa1143110:CDS |
TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 7_4:+18324681 | Msa1143110:CDS |
GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 7_4:+18325667 | Msa1143110:CDS |
ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 7_4:+18326458 | Msa1143110:CDS |
GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 7_4:-18325637 | None:intergenic |
AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 7_4:-18324638 | None:intergenic |
GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 7_4:+18325957 | Msa1143110:CDS |
GTATATCAATGTTCAGTCTT+CGG | 0.430453 | 7_4:-18324297 | None:intergenic |
CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 7_4:+18324643 | Msa1143110:CDS |
AAGTAGAGATGAATACTATA+TGG | 0.431841 | 7_4:+18324909 | Msa1143110:CDS |
TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 7_4:-18326055 | None:intergenic |
ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 7_4:-18326299 | None:intergenic |
AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | 7_4:+18326439 | Msa1143110:CDS |
ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | 7_4:+18325813 | Msa1143110:CDS |
GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 7_4:-18325726 | None:intergenic |
GATATCCATCCTAGTCACTA+TGG | 0.449002 | 7_4:+18324730 | Msa1143110:CDS |
ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 7_4:-18325958 | None:intergenic |
AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 7_4:+18324670 | Msa1143110:CDS |
ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | 7_4:-18325828 | None:intergenic |
AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 7_4:+18326457 | Msa1143110:CDS |
GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 7_4:-18325756 | None:intergenic |
GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | 7_4:+18326448 | Msa1143110:CDS |
GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | 7_4:+18326447 | Msa1143110:CDS |
GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 7_4:+18325713 | Msa1143110:CDS |
GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 7_4:-18324612 | None:intergenic |
GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 7_4:+18326263 | Msa1143110:CDS |
ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 7_4:+18324456 | Msa1143110:CDS |
CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 7_4:-18326251 | None:intergenic |
AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 7_4:+18325004 | Msa1143110:CDS |
GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 7_4:+18326427 | Msa1143110:CDS |
CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 7_4:-18325228 | None:intergenic |
CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 7_4:+18324487 | Msa1143110:CDS |
AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 7_4:+18325668 | Msa1143110:CDS |
ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | 7_4:+18324376 | Msa1143110:CDS |
TGTTCATATCTCTCATCAAA+AGG | 0.491842 | 7_4:-18326152 | None:intergenic |
TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 7_4:+18324808 | Msa1143110:CDS |
GATTGGAATGAAATTTGGAA+TGG | 0.498930 | 7_4:+18324375 | Msa1143110:CDS |
CAAGTTGATGATAAAATACA+TGG | 0.502523 | 7_4:+18326353 | Msa1143110:CDS |
GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 7_4:+18325176 | Msa1143110:CDS |
TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 7_4:+18326459 | Msa1143110:CDS |
CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 7_4:-18325203 | None:intergenic |
TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 7_4:+18325506 | Msa1143110:CDS |
AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 7_4:+18326628 | Msa1143110:CDS |
GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 7_4:-18324688 | None:intergenic |
GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 7_4:+18326008 | Msa1143110:CDS |
TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 7_4:+18325460 | Msa1143110:CDS |
GTAAACAAACATCGAATCCA+TGG | 0.519391 | 7_4:+18326219 | Msa1143110:CDS |
CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 7_4:+18325924 | Msa1143110:CDS |
ATATAGTATTCATCTCTACT+TGG | 0.523407 | 7_4:-18324907 | None:intergenic |
AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 7_4:+18325939 | Msa1143110:CDS |
AAAACTACCTATAGGTGGTA+GGG | 0.530153 | 7_4:+18325821 | Msa1143110:CDS |
GCATTTACCTTTATGAACCT+GGG | 0.530323 | 7_4:-18325367 | None:intergenic |
AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 7_4:-18326590 | None:intergenic |
GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 7_4:+18325411 | Msa1143110:CDS |
GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 7_4:+18325948 | Msa1143110:CDS |
AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 7_4:+18326675 | Msa1143110:CDS |
GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 7_4:-18326035 | None:intergenic |
CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 7_4:+18326405 | Msa1143110:CDS |
AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 7_4:-18324988 | None:intergenic |
TAAAACTACCTATAGGTGGT+AGG | 0.538804 | 7_4:+18325820 | Msa1143110:CDS |
CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 7_4:-18324999 | None:intergenic |
TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 7_4:-18325748 | None:intergenic |
TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 7_4:-18325745 | None:intergenic |
TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 7_4:-18326236 | None:intergenic |
TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 7_4:-18325229 | None:intergenic |
AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 7_4:+18325005 | Msa1143110:CDS |
CAGATATTGGAATGTTCACT+CGG | 0.551609 | 7_4:+18326089 | Msa1143110:CDS |
TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 7_4:-18325593 | None:intergenic |
GAATACTATATGGTAGCGAC+GGG | 0.553560 | 7_4:+18324919 | Msa1143110:CDS |
GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 7_4:+18325414 | Msa1143110:CDS |
CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 7_4:+18324644 | Msa1143110:CDS |
GATTATTACGAGCTATACTT+GGG | 0.558504 | 7_4:+18325766 | Msa1143110:CDS |
GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | 7_4:+18325844 | Msa1143110:CDS |
CTCGGAACTACGATTATTGG+AGG | 0.559077 | 7_4:+18326554 | Msa1143110:CDS |
ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 7_4:-18324443 | None:intergenic |
AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 7_4:+18326679 | Msa1143110:CDS |
GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 7_4:-18324544 | None:intergenic |
GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 7_4:-18326664 | None:intergenic |
AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 7_4:-18326381 | None:intergenic |
TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 7_4:-18326413 | None:intergenic |
AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 7_4:+18326099 | Msa1143110:CDS |
GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 7_4:+18325737 | Msa1143110:CDS |
TGAATACTATATGGTAGCGA+CGG | 0.571395 | 7_4:+18324918 | Msa1143110:CDS |
TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 7_4:-18324773 | None:intergenic |
CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 7_4:-18324739 | None:intergenic |
CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 7_4:+18326416 | Msa1143110:CDS |
AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 7_4:+18325935 | Msa1143110:CDS |
ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 7_4:+18326242 | Msa1143110:CDS |
CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 7_4:+18325576 | Msa1143110:CDS |
CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 7_4:-18326069 | None:intergenic |
AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 7_4:-18325624 | None:intergenic |
CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 7_4:+18326251 | Msa1143110:CDS |
TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 7_4:+18324760 | Msa1143110:CDS |
ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 7_4:-18325082 | None:intergenic |
TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 7_4:+18325679 | Msa1143110:CDS |
TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 7_4:-18325477 | None:intergenic |
ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 7_4:+18325461 | Msa1143110:CDS |
AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 7_4:+18325940 | Msa1143110:CDS |
GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 7_4:+18326426 | Msa1143110:CDS |
TCCATCTCACATCAATAACT+CGG | 0.602104 | 7_4:-18325845 | None:intergenic |
CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 7_4:+18324817 | Msa1143110:CDS |
GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 7_4:+18325465 | Msa1143110:CDS |
TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 7_4:-18326068 | None:intergenic |
GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 7_4:+18324803 | Msa1143110:CDS |
AAAATACATGGACGTTCCAG+TGG | 0.614997 | 7_4:+18326365 | Msa1143110:CDS |
AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 7_4:+18325188 | Msa1143110:CDS |
GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 7_4:-18324550 | None:intergenic |
AAACTACCTATAGGTGGTAG+GGG | 0.618823 | 7_4:+18325822 | Msa1143110:CDS |
TGATGAGAGATATGAACAGG+AGG | 0.620223 | 7_4:+18326157 | Msa1143110:CDS |
AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 7_4:-18324806 | None:intergenic |
CATTTGTCCAATTGACACCT+CGG | 0.622149 | 7_4:+18324756 | Msa1143110:CDS |
GTACCCTCACGAATGAATGT+AGG | 0.622385 | 7_4:+18326065 | Msa1143110:CDS |
TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 7_4:-18326036 | None:intergenic |
TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 7_4:-18324735 | None:intergenic |
AAACAAGGAGGACAACGGGT+AGG | 0.626804 | 7_4:+18326431 | Msa1143110:CDS |
ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 7_4:+18324818 | Msa1143110:CDS |
TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 7_4:+18324673 | Msa1143110:CDS |
TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 7_4:+18324683 | Msa1143110:CDS |
GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 7_4:+18325680 | Msa1143110:CDS |
ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 7_4:+18326406 | Msa1143110:CDS |
ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 7_4:+18324772 | Msa1143110:CDS |
AGGAACAATACCTAAACCTG+TGG | 0.656849 | 7_4:+18326574 | Msa1143110:CDS |
AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 7_4:+18326536 | Msa1143110:CDS |
ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | 7_4:+18326442 | Msa1143110:CDS |
TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 7_4:+18326043 | Msa1143110:CDS |
GATTCAGGTATCGACCTCAA+AGG | 0.672007 | 7_4:+18325788 | Msa1143110:CDS |
TGTCTAAAACTACCTATAGG+TGG | 0.673297 | 7_4:+18325816 | Msa1143110:CDS |
CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 7_4:+18325228 | Msa1143110:CDS |
GAATATTTGATGGAAGAACA+GGG | 0.689025 | 7_4:+18326273 | Msa1143110:CDS |
GCGAGATATATTGACAGCTG+CGG | 0.702124 | 7_4:+18324345 | Msa1143110:CDS |
GCAGCTGTCAATATATCTCG+CGG | 0.702925 | 7_4:-18324343 | None:intergenic |
AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 7_4:+18326419 | Msa1143110:CDS |
ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 7_4:+18324954 | Msa1143110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAATTAATTTCAAGATATA+AGG | - | chr7_4:18326332-18326351 | None:intergenic | 15.0% |
!! | TGAATTAATTTCAAGATATA+AGG | - | chr7_4:18326332-18326351 | None:intergenic | 15.0% |
!! | TAACAAAAATGTATTGTTCT+CGG | - | chr7_4:18324323-18324342 | None:intergenic | 20.0% |
!!! | AAGATCATTTTATTTGGAAA+TGG | + | chr7_4:18325276-18325295 | Msa1143110:CDS | 20.0% |
!!! | AGATCATTTTATTTGGAAAT+GGG | + | chr7_4:18325277-18325296 | Msa1143110:CDS | 20.0% |
!!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr7_4:18325603-18325622 | None:intergenic | 20.0% |
!!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr7_4:18325650-18325669 | None:intergenic | 20.0% |
!! | ATATATATATGAATCGTTTC+TGG | - | chr7_4:18325900-18325919 | None:intergenic | 20.0% |
!! | TAACAAAAATGTATTGTTCT+CGG | - | chr7_4:18324323-18324342 | None:intergenic | 20.0% |
!!! | AAGATCATTTTATTTGGAAA+TGG | + | chr7_4:18325276-18325295 | Msa1143110:CDS | 20.0% |
!!! | AGATCATTTTATTTGGAAAT+GGG | + | chr7_4:18325277-18325296 | Msa1143110:CDS | 20.0% |
!!! | ATTTTATTAGTGATTCTTTC+AGG | - | chr7_4:18325603-18325622 | None:intergenic | 20.0% |
!!! | TTCCATTTTTGTCTAAATTT+CGG | - | chr7_4:18325650-18325669 | None:intergenic | 20.0% |
!! | ATATATATATGAATCGTTTC+TGG | - | chr7_4:18325900-18325919 | None:intergenic | 20.0% |
! | AACAAAAATGTATTGTTCTC+GGG | - | chr7_4:18324322-18324341 | None:intergenic | 25.0% |
! | CATTTGATTGGAATGAAATT+TGG | + | chr7_4:18324370-18324389 | Msa1143110:CDS | 25.0% |
!! | ATTGGAATGAAATTTGGAAT+GGG | + | chr7_4:18324376-18324395 | Msa1143110:CDS | 25.0% |
! | GATCTATTACAAGATCAATT+TGG | + | chr7_4:18324451-18324470 | Msa1143110:CDS | 25.0% |
! | ATTACAAGATCAATTTGGAT+TGG | + | chr7_4:18324456-18324475 | Msa1143110:CDS | 25.0% |
! | CGTTTAGAAAATATAATTCG+AGG | + | chr7_4:18324487-18324506 | Msa1143110:CDS | 25.0% |
!! | GATCTAAAACTTGAGATAAT+GGG | - | chr7_4:18324615-18324634 | None:intergenic | 25.0% |
! | CTCTCAGAAATTTCAAAAAA+TGG | - | chr7_4:18324856-18324875 | None:intergenic | 25.0% |
! | ATATAGTATTCATCTCTACT+TGG | - | chr7_4:18324910-18324929 | None:intergenic | 25.0% |
! | AAGTAGAGATGAATACTATA+TGG | + | chr7_4:18324909-18324928 | Msa1143110:CDS | 25.0% |
! | CAATAGTTAGAAATTCTTGA+CGG | - | chr7_4:18325002-18325021 | None:intergenic | 25.0% |
! | AAGAATTTCTAACTATTGCA+TGG | + | chr7_4:18325004-18325023 | Msa1143110:CDS | 25.0% |
! | AGAATTTCTAACTATTGCAT+GGG | + | chr7_4:18325005-18325024 | Msa1143110:CDS | 25.0% |
! | CCAATAGAAAAATATTGGAA+GGG | - | chr7_4:18325057-18325076 | None:intergenic | 25.0% |
! | TCCAATAGAAAAATATTGGA+AGG | - | chr7_4:18325058-18325077 | None:intergenic | 25.0% |
! | AAGCTCCAATAGAAAAATAT+TGG | - | chr7_4:18325062-18325081 | None:intergenic | 25.0% |
!! | ACTGACAAGATCATTTTATT+TGG | + | chr7_4:18325270-18325289 | Msa1143110:CDS | 25.0% |
! | GAACGTTGATATCTAATTAA+TGG | - | chr7_4:18325318-18325337 | None:intergenic | 25.0% |
! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr7_4:18325377-18325396 | Msa1143110:CDS | 25.0% |
! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr7_4:18325378-18325397 | Msa1143110:CDS | 25.0% |
! | AAAAATGGAATTGTGATTCT+GGG | + | chr7_4:18325660-18325679 | Msa1143110:CDS | 25.0% |
! | AATTAAAGTAGGTGATAAAG+TGG | + | chr7_4:18325935-18325954 | Msa1143110:CDS | 25.0% |
!! | TAAGGTTTTCCTATTATAAC+AGG | - | chr7_4:18326314-18326333 | None:intergenic | 25.0% |
!!! | CAAGTTGATGATAAAATACA+TGG | + | chr7_4:18326353-18326372 | Msa1143110:CDS | 25.0% |
! | AACAAAAATGTATTGTTCTC+GGG | - | chr7_4:18324322-18324341 | None:intergenic | 25.0% |
! | CATTTGATTGGAATGAAATT+TGG | + | chr7_4:18324370-18324389 | Msa1143110:CDS | 25.0% |
!! | ATTGGAATGAAATTTGGAAT+GGG | + | chr7_4:18324376-18324395 | Msa1143110:CDS | 25.0% |
! | GATCTATTACAAGATCAATT+TGG | + | chr7_4:18324451-18324470 | Msa1143110:CDS | 25.0% |
! | ATTACAAGATCAATTTGGAT+TGG | + | chr7_4:18324456-18324475 | Msa1143110:CDS | 25.0% |
! | CGTTTAGAAAATATAATTCG+AGG | + | chr7_4:18324487-18324506 | Msa1143110:CDS | 25.0% |
!! | GATCTAAAACTTGAGATAAT+GGG | - | chr7_4:18324615-18324634 | None:intergenic | 25.0% |
! | CTCTCAGAAATTTCAAAAAA+TGG | - | chr7_4:18324856-18324875 | None:intergenic | 25.0% |
! | ATATAGTATTCATCTCTACT+TGG | - | chr7_4:18324910-18324929 | None:intergenic | 25.0% |
! | AAGTAGAGATGAATACTATA+TGG | + | chr7_4:18324909-18324928 | Msa1143110:CDS | 25.0% |
! | CAATAGTTAGAAATTCTTGA+CGG | - | chr7_4:18325002-18325021 | None:intergenic | 25.0% |
! | AAGAATTTCTAACTATTGCA+TGG | + | chr7_4:18325004-18325023 | Msa1143110:CDS | 25.0% |
! | AGAATTTCTAACTATTGCAT+GGG | + | chr7_4:18325005-18325024 | Msa1143110:CDS | 25.0% |
! | CCAATAGAAAAATATTGGAA+GGG | - | chr7_4:18325057-18325076 | None:intergenic | 25.0% |
! | TCCAATAGAAAAATATTGGA+AGG | - | chr7_4:18325058-18325077 | None:intergenic | 25.0% |
! | AAGCTCCAATAGAAAAATAT+TGG | - | chr7_4:18325062-18325081 | None:intergenic | 25.0% |
!! | ACTGACAAGATCATTTTATT+TGG | + | chr7_4:18325270-18325289 | Msa1143110:CDS | 25.0% |
! | GAACGTTGATATCTAATTAA+TGG | - | chr7_4:18325318-18325337 | None:intergenic | 25.0% |
! | TAAAGGTAAATGCGTAAAAA+AGG | + | chr7_4:18325377-18325396 | Msa1143110:CDS | 25.0% |
! | AAAGGTAAATGCGTAAAAAA+GGG | + | chr7_4:18325378-18325397 | Msa1143110:CDS | 25.0% |
! | AAAAATGGAATTGTGATTCT+GGG | + | chr7_4:18325660-18325679 | Msa1143110:CDS | 25.0% |
! | AATTAAAGTAGGTGATAAAG+TGG | + | chr7_4:18325935-18325954 | Msa1143110:CDS | 25.0% |
!! | TAAGGTTTTCCTATTATAAC+AGG | - | chr7_4:18326314-18326333 | None:intergenic | 25.0% |
!!! | CAAGTTGATGATAAAATACA+TGG | + | chr7_4:18326353-18326372 | Msa1143110:CDS | 25.0% |
GTATATCAATGTTCAGTCTT+CGG | - | chr7_4:18324300-18324319 | None:intergenic | 30.0% | |
GATTGGAATGAAATTTGGAA+TGG | + | chr7_4:18324375-18324394 | Msa1143110:CDS | 30.0% | |
ATCTTGTAATAGATCTGCTA+CGG | - | chr7_4:18324446-18324465 | None:intergenic | 30.0% | |
ATAATTCGAGGAACTATATC+TGG | + | chr7_4:18324499-18324518 | Msa1143110:CDS | 30.0% | |
GATTCATAAGTGGTTGTTAA+TGG | - | chr7_4:18324577-18324596 | None:intergenic | 30.0% | |
!!! | ACCACTTATGAATCGTTTTT+TGG | + | chr7_4:18324583-18324602 | Msa1143110:CDS | 30.0% |
TCCAAAAAACGATTCATAAG+TGG | - | chr7_4:18324587-18324606 | None:intergenic | 30.0% | |
! | CGATCTAAAACTTGAGATAA+TGG | - | chr7_4:18324616-18324635 | None:intergenic | 30.0% |
! | TTTTCTCCCATGAACTATTT+GGG | - | chr7_4:18324653-18324672 | None:intergenic | 30.0% |
! | ATTTTCTCCCATGAACTATT+TGG | - | chr7_4:18324654-18324673 | None:intergenic | 30.0% |
TGGGAGAAAATTGAGTTATT+TGG | + | chr7_4:18324663-18324682 | Msa1143110:CDS | 30.0% | |
GGGAGAAAATTGAGTTATTT+GGG | + | chr7_4:18324664-18324683 | Msa1143110:CDS | 30.0% | |
!!! | AATTTTTTAGCACTGAATCG+AGG | + | chr7_4:18324943-18324962 | Msa1143110:CDS | 30.0% |
! | CCCTTCCAATATTTTTCTAT+TGG | + | chr7_4:18325054-18325073 | Msa1143110:CDS | 30.0% |
!! | ATGCATGCAAGTATTTTTGT+TGG | - | chr7_4:18325340-18325359 | None:intergenic | 30.0% |
TATTAGTAGCTTATATGCCA+TGG | + | chr7_4:18325460-18325479 | Msa1143110:CDS | 30.0% | |
ATTAGTAGCTTATATGCCAT+GGG | + | chr7_4:18325461-18325480 | Msa1143110:CDS | 30.0% | |
GTCTAAATTTCGGAGTAAAT+GGG | - | chr7_4:18325640-18325659 | None:intergenic | 30.0% | |
TGTCTAAATTTCGGAGTAAA+TGG | - | chr7_4:18325641-18325660 | None:intergenic | 30.0% | |
CTCCGAAATTTAGACAAAAA+TGG | + | chr7_4:18325645-18325664 | Msa1143110:CDS | 30.0% | |
CAAAAATGGAATTGTGATTC+TGG | + | chr7_4:18325659-18325678 | Msa1143110:CDS | 30.0% | |
AGATTATTACGAGCTATACT+TGG | + | chr7_4:18325765-18325784 | Msa1143110:CDS | 30.0% | |
GATTATTACGAGCTATACTT+GGG | + | chr7_4:18325766-18325785 | Msa1143110:CDS | 30.0% | |
! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr7_4:18325805-18325824 | None:intergenic | 30.0% |
! | ACTTGTCTAAAACTACCTAT+AGG | + | chr7_4:18325813-18325832 | Msa1143110:CDS | 30.0% |
CAGAAACGTGAAATTAAAGT+AGG | + | chr7_4:18325924-18325943 | Msa1143110:CDS | 30.0% | |
! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr7_4:18325986-18326005 | Msa1143110:CDS | 30.0% |
AATGAATGTAGGACAGATAT+TGG | + | chr7_4:18326076-18326095 | Msa1143110:CDS | 30.0% | |
TGTTCATATCTCTCATCAAA+AGG | - | chr7_4:18326155-18326174 | None:intergenic | 30.0% | |
! | TTTTGATGAGAGATATGAAC+AGG | + | chr7_4:18326154-18326173 | Msa1143110:CDS | 30.0% |
! | TTCAGAAAACACAAGTTTTC+TGG | - | chr7_4:18326186-18326205 | None:intergenic | 30.0% |
GAATATTTGATGGAAGAACA+GGG | + | chr7_4:18326273-18326292 | Msa1143110:CDS | 30.0% | |
ATTATAACAGGCTGTTCAAA+AGG | - | chr7_4:18326302-18326321 | None:intergenic | 30.0% | |
TTTGAACAGCCTGTTATAAT+AGG | + | chr7_4:18326302-18326321 | Msa1143110:CDS | 30.0% | |
GTATATCAATGTTCAGTCTT+CGG | - | chr7_4:18324300-18324319 | None:intergenic | 30.0% | |
GATTGGAATGAAATTTGGAA+TGG | + | chr7_4:18324375-18324394 | Msa1143110:CDS | 30.0% | |
ATCTTGTAATAGATCTGCTA+CGG | - | chr7_4:18324446-18324465 | None:intergenic | 30.0% | |
ATAATTCGAGGAACTATATC+TGG | + | chr7_4:18324499-18324518 | Msa1143110:CDS | 30.0% | |
GATTCATAAGTGGTTGTTAA+TGG | - | chr7_4:18324577-18324596 | None:intergenic | 30.0% | |
!!! | ACCACTTATGAATCGTTTTT+TGG | + | chr7_4:18324583-18324602 | Msa1143110:CDS | 30.0% |
TCCAAAAAACGATTCATAAG+TGG | - | chr7_4:18324587-18324606 | None:intergenic | 30.0% | |
! | CGATCTAAAACTTGAGATAA+TGG | - | chr7_4:18324616-18324635 | None:intergenic | 30.0% |
! | TTTTCTCCCATGAACTATTT+GGG | - | chr7_4:18324653-18324672 | None:intergenic | 30.0% |
! | ATTTTCTCCCATGAACTATT+TGG | - | chr7_4:18324654-18324673 | None:intergenic | 30.0% |
TGGGAGAAAATTGAGTTATT+TGG | + | chr7_4:18324663-18324682 | Msa1143110:CDS | 30.0% | |
GGGAGAAAATTGAGTTATTT+GGG | + | chr7_4:18324664-18324683 | Msa1143110:CDS | 30.0% | |
!!! | AATTTTTTAGCACTGAATCG+AGG | + | chr7_4:18324943-18324962 | Msa1143110:CDS | 30.0% |
! | CCCTTCCAATATTTTTCTAT+TGG | + | chr7_4:18325054-18325073 | Msa1143110:CDS | 30.0% |
!! | ATGCATGCAAGTATTTTTGT+TGG | - | chr7_4:18325340-18325359 | None:intergenic | 30.0% |
TATTAGTAGCTTATATGCCA+TGG | + | chr7_4:18325460-18325479 | Msa1143110:CDS | 30.0% | |
ATTAGTAGCTTATATGCCAT+GGG | + | chr7_4:18325461-18325480 | Msa1143110:CDS | 30.0% | |
GTCTAAATTTCGGAGTAAAT+GGG | - | chr7_4:18325640-18325659 | None:intergenic | 30.0% | |
TGTCTAAATTTCGGAGTAAA+TGG | - | chr7_4:18325641-18325660 | None:intergenic | 30.0% | |
CTCCGAAATTTAGACAAAAA+TGG | + | chr7_4:18325645-18325664 | Msa1143110:CDS | 30.0% | |
CAAAAATGGAATTGTGATTC+TGG | + | chr7_4:18325659-18325678 | Msa1143110:CDS | 30.0% | |
AGATTATTACGAGCTATACT+TGG | + | chr7_4:18325765-18325784 | Msa1143110:CDS | 30.0% | |
GATTATTACGAGCTATACTT+GGG | + | chr7_4:18325766-18325785 | Msa1143110:CDS | 30.0% | |
! | TTTTAGACAAGTTTCCTTTG+AGG | - | chr7_4:18325805-18325824 | None:intergenic | 30.0% |
! | ACTTGTCTAAAACTACCTAT+AGG | + | chr7_4:18325813-18325832 | Msa1143110:CDS | 30.0% |
CAGAAACGTGAAATTAAAGT+AGG | + | chr7_4:18325924-18325943 | Msa1143110:CDS | 30.0% | |
! | TTCAAAGATTTTGTCTAGAC+AGG | + | chr7_4:18325986-18326005 | Msa1143110:CDS | 30.0% |
AATGAATGTAGGACAGATAT+TGG | + | chr7_4:18326076-18326095 | Msa1143110:CDS | 30.0% | |
TGTTCATATCTCTCATCAAA+AGG | - | chr7_4:18326155-18326174 | None:intergenic | 30.0% | |
! | TTTTGATGAGAGATATGAAC+AGG | + | chr7_4:18326154-18326173 | Msa1143110:CDS | 30.0% |
! | TTCAGAAAACACAAGTTTTC+TGG | - | chr7_4:18326186-18326205 | None:intergenic | 30.0% |
GAATATTTGATGGAAGAACA+GGG | + | chr7_4:18326273-18326292 | Msa1143110:CDS | 30.0% | |
ATTATAACAGGCTGTTCAAA+AGG | - | chr7_4:18326302-18326321 | None:intergenic | 30.0% | |
TTTGAACAGCCTGTTATAAT+AGG | + | chr7_4:18326302-18326321 | Msa1143110:CDS | 30.0% | |
GTTGAAGTCACTAAATTCTG+AGG | - | chr7_4:18324553-18324572 | None:intergenic | 35.0% | |
AACTATTTGGGTCAATGGAT+TGG | - | chr7_4:18324641-18324660 | None:intergenic | 35.0% | |
CATTGACCCAAATAGTTCAT+GGG | + | chr7_4:18324644-18324663 | Msa1143110:CDS | 35.0% | |
AAATTGAGTTATTTGGGTCC+TGG | + | chr7_4:18324670-18324689 | Msa1143110:CDS | 35.0% | |
GGAATCAATGTAGGACTTAT+TGG | + | chr7_4:18324781-18324800 | Msa1143110:CDS | 35.0% | |
! | TGAATACTATATGGTAGCGA+CGG | + | chr7_4:18324918-18324937 | Msa1143110:CDS | 35.0% |
ATGCTCGATAAAAGGAATCA+GGG | - | chr7_4:18325085-18325104 | None:intergenic | 35.0% | |
TATGCTCGATAAAAGGAATC+AGG | - | chr7_4:18325086-18325105 | None:intergenic | 35.0% | |
GCATCATTATGCTCGATAAA+AGG | - | chr7_4:18325093-18325112 | None:intergenic | 35.0% | |
! | AGTTCCAACAATGCACTTTT+CGG | - | chr7_4:18325172-18325191 | None:intergenic | 35.0% |
CAAAAATCCCAGGTTCATAA+AGG | + | chr7_4:18325360-18325379 | Msa1143110:CDS | 35.0% | |
GCATTTACCTTTATGAACCT+GGG | - | chr7_4:18325370-18325389 | None:intergenic | 35.0% | |
!! | AAGGGACAAATTTTAGCAGA+TGG | + | chr7_4:18325396-18325415 | Msa1143110:CDS | 35.0% |
!! | AATTGTGATTCTGGGATCTT+GGG | + | chr7_4:18325668-18325687 | Msa1143110:CDS | 35.0% |
!! | AGAAACAGGGGATATTTTAG+TGG | + | chr7_4:18325692-18325711 | Msa1143110:CDS | 35.0% |
!!! | GAAACAGGGGATATTTTAGT+GGG | + | chr7_4:18325693-18325712 | Msa1143110:CDS | 35.0% |
GCTCGTAATAATCTATCTTC+CGG | - | chr7_4:18325759-18325778 | None:intergenic | 35.0% | |
! | TGTCTAAAACTACCTATAGG+TGG | + | chr7_4:18325816-18325835 | Msa1143110:CDS | 35.0% |
TAAAACTACCTATAGGTGGT+AGG | + | chr7_4:18325820-18325839 | Msa1143110:CDS | 35.0% | |
AAAACTACCTATAGGTGGTA+GGG | + | chr7_4:18325821-18325840 | Msa1143110:CDS | 35.0% | |
TCCATCTCACATCAATAACT+CGG | - | chr7_4:18325848-18325867 | None:intergenic | 35.0% | |
AGATGGATCCAAAAAAAAGC+AGG | + | chr7_4:18325861-18325880 | Msa1143110:CDS | 35.0% | |
!!! | AGCTAGAACCTGCTTTTTTT+TGG | - | chr7_4:18325872-18325891 | None:intergenic | 35.0% |
!! | GATATGCCTTATTTGCAAGA+TGG | + | chr7_4:18326008-18326027 | Msa1143110:CDS | 35.0% |
ATATGGTCTTCAACCCATTA+GGG | + | chr7_4:18326042-18326061 | Msa1143110:CDS | 35.0% | |
CAGATATTGGAATGTTCACT+CGG | + | chr7_4:18326089-18326108 | Msa1143110:CDS | 35.0% | |
TGGATTCGATGTTTGTTTAC+TGG | - | chr7_4:18326219-18326238 | None:intergenic | 35.0% | |
GTAAACAAACATCGAATCCA+TGG | + | chr7_4:18326219-18326238 | Msa1143110:CDS | 35.0% | |
GGAATATTTGATGGAAGAAC+AGG | + | chr7_4:18326272-18326291 | Msa1143110:CDS | 35.0% | |
AGAAAGACTTCCAGATTCAA+AGG | + | chr7_4:18326675-18326694 | Msa1143110:CDS | 35.0% | |
AAACTTCCTTCCTTTGAATC+TGG | - | chr7_4:18326688-18326707 | None:intergenic | 35.0% | |
GTTGAAGTCACTAAATTCTG+AGG | - | chr7_4:18324553-18324572 | None:intergenic | 35.0% | |
AACTATTTGGGTCAATGGAT+TGG | - | chr7_4:18324641-18324660 | None:intergenic | 35.0% | |
CATTGACCCAAATAGTTCAT+GGG | + | chr7_4:18324644-18324663 | Msa1143110:CDS | 35.0% | |
AAATTGAGTTATTTGGGTCC+TGG | + | chr7_4:18324670-18324689 | Msa1143110:CDS | 35.0% | |
GGAATCAATGTAGGACTTAT+TGG | + | chr7_4:18324781-18324800 | Msa1143110:CDS | 35.0% | |
! | TGAATACTATATGGTAGCGA+CGG | + | chr7_4:18324918-18324937 | Msa1143110:CDS | 35.0% |
ATGCTCGATAAAAGGAATCA+GGG | - | chr7_4:18325085-18325104 | None:intergenic | 35.0% | |
TATGCTCGATAAAAGGAATC+AGG | - | chr7_4:18325086-18325105 | None:intergenic | 35.0% | |
GCATCATTATGCTCGATAAA+AGG | - | chr7_4:18325093-18325112 | None:intergenic | 35.0% | |
! | AGTTCCAACAATGCACTTTT+CGG | - | chr7_4:18325172-18325191 | None:intergenic | 35.0% |
CAAAAATCCCAGGTTCATAA+AGG | + | chr7_4:18325360-18325379 | Msa1143110:CDS | 35.0% | |
GCATTTACCTTTATGAACCT+GGG | - | chr7_4:18325370-18325389 | None:intergenic | 35.0% | |
!! | AAGGGACAAATTTTAGCAGA+TGG | + | chr7_4:18325396-18325415 | Msa1143110:CDS | 35.0% |
!! | AATTGTGATTCTGGGATCTT+GGG | + | chr7_4:18325668-18325687 | Msa1143110:CDS | 35.0% |
!! | AGAAACAGGGGATATTTTAG+TGG | + | chr7_4:18325692-18325711 | Msa1143110:CDS | 35.0% |
!!! | GAAACAGGGGATATTTTAGT+GGG | + | chr7_4:18325693-18325712 | Msa1143110:CDS | 35.0% |
GCTCGTAATAATCTATCTTC+CGG | - | chr7_4:18325759-18325778 | None:intergenic | 35.0% | |
! | TGTCTAAAACTACCTATAGG+TGG | + | chr7_4:18325816-18325835 | Msa1143110:CDS | 35.0% |
TAAAACTACCTATAGGTGGT+AGG | + | chr7_4:18325820-18325839 | Msa1143110:CDS | 35.0% | |
AAAACTACCTATAGGTGGTA+GGG | + | chr7_4:18325821-18325840 | Msa1143110:CDS | 35.0% | |
TCCATCTCACATCAATAACT+CGG | - | chr7_4:18325848-18325867 | None:intergenic | 35.0% | |
AGATGGATCCAAAAAAAAGC+AGG | + | chr7_4:18325861-18325880 | Msa1143110:CDS | 35.0% | |
!!! | AGCTAGAACCTGCTTTTTTT+TGG | - | chr7_4:18325872-18325891 | None:intergenic | 35.0% |
!! | GATATGCCTTATTTGCAAGA+TGG | + | chr7_4:18326008-18326027 | Msa1143110:CDS | 35.0% |
ATATGGTCTTCAACCCATTA+GGG | + | chr7_4:18326042-18326061 | Msa1143110:CDS | 35.0% | |
CAGATATTGGAATGTTCACT+CGG | + | chr7_4:18326089-18326108 | Msa1143110:CDS | 35.0% | |
TGGATTCGATGTTTGTTTAC+TGG | - | chr7_4:18326219-18326238 | None:intergenic | 35.0% | |
GTAAACAAACATCGAATCCA+TGG | + | chr7_4:18326219-18326238 | Msa1143110:CDS | 35.0% | |
GGAATATTTGATGGAAGAAC+AGG | + | chr7_4:18326272-18326291 | Msa1143110:CDS | 35.0% | |
AGAAAGACTTCCAGATTCAA+AGG | + | chr7_4:18326675-18326694 | Msa1143110:CDS | 35.0% | |
AAACTTCCTTCCTTTGAATC+TGG | - | chr7_4:18326688-18326707 | None:intergenic | 35.0% | |
! | GTCACTAAATTCTGAGGAGT+AGG | - | chr7_4:18324547-18324566 | None:intergenic | 40.0% |
CCATGAACTATTTGGGTCAA+TGG | - | chr7_4:18324646-18324665 | None:intergenic | 40.0% | |
CCATTGACCCAAATAGTTCA+TGG | + | chr7_4:18324643-18324662 | Msa1143110:CDS | 40.0% | |
!!! | GAACTGCTAGTTTTCGGATA+CGG | + | chr7_4:18324707-18324726 | Msa1143110:CDS | 40.0% |
!!! | AACTGCTAGTTTTCGGATAC+GGG | + | chr7_4:18324708-18324727 | Msa1143110:CDS | 40.0% |
GATATCCATCCTAGTCACTA+TGG | + | chr7_4:18324730-18324749 | Msa1143110:CDS | 40.0% | |
CATTTGTCCAATTGACACCT+CGG | + | chr7_4:18324756-18324775 | Msa1143110:CDS | 40.0% | |
TGTAGGACTTATTGGATCCT+TGG | + | chr7_4:18324789-18324808 | Msa1143110:CDS | 40.0% | |
! | GAATACTATATGGTAGCGAC+GGG | + | chr7_4:18324919-18324938 | Msa1143110:CDS | 40.0% |
TCTAACTATTGCATGGGAAC+AGG | + | chr7_4:18325011-18325030 | Msa1143110:CDS | 40.0% | |
! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr7_4:18325171-18325190 | Msa1143110:CDS | 40.0% |
TTGCATGCATCAAAAATCCC+AGG | + | chr7_4:18325350-18325369 | Msa1143110:CDS | 40.0% | |
CGCATTTACCTTTATGAACC+TGG | - | chr7_4:18325371-18325390 | None:intergenic | 40.0% | |
TCAGAATTGTAACCTTCCCA+TGG | - | chr7_4:18325480-18325499 | None:intergenic | 40.0% | |
TGTACTCATTAGTGAACGTC+TGG | + | chr7_4:18325506-18325525 | Msa1143110:CDS | 40.0% | |
TAGTGATTCTTTCAGGACCA+TGG | - | chr7_4:18325596-18325615 | None:intergenic | 40.0% | |
! | AGTAAATGGGCTTCTAGATG+TGG | - | chr7_4:18325627-18325646 | None:intergenic | 40.0% |
!! | GAATTGTGATTCTGGGATCT+TGG | + | chr7_4:18325667-18325686 | Msa1143110:CDS | 40.0% |
GGGTAAATTAACGCCTCAAA+TGG | + | chr7_4:18325713-18325732 | Msa1143110:CDS | 40.0% | |
TAATCTATCTTCCGGAGCAT+AGG | - | chr7_4:18325751-18325770 | None:intergenic | 40.0% | |
AAACTACCTATAGGTGGTAG+GGG | + | chr7_4:18325822-18325841 | Msa1143110:CDS | 40.0% | |
AAAGTAGGTGATAAAGTGGC+CGG | + | chr7_4:18325939-18325958 | Msa1143110:CDS | 40.0% | |
! | ACCTTTATTTCCATGTCTCC+CGG | - | chr7_4:18325961-18325980 | None:intergenic | 40.0% |
GGTCTTCCATCTTGCAAATA+AGG | - | chr7_4:18326017-18326036 | None:intergenic | 40.0% | |
! | TGGGTTGAAGACCATATCAA+CGG | - | chr7_4:18326039-18326058 | None:intergenic | 40.0% |
GATATGGTCTTCAACCCATT+AGG | + | chr7_4:18326041-18326060 | Msa1143110:CDS | 40.0% | |
TATGGTCTTCAACCCATTAG+GGG | + | chr7_4:18326043-18326062 | Msa1143110:CDS | 40.0% | |
TGTCCTACATTCATTCGTGA+GGG | - | chr7_4:18326071-18326090 | None:intergenic | 40.0% | |
!! | AATGTTCACTCGGATTAGCT+GGG | + | chr7_4:18326099-18326118 | Msa1143110:CDS | 40.0% |
TGATGAGAGATATGAACAGG+AGG | + | chr7_4:18326157-18326176 | Msa1143110:CDS | 40.0% | |
TACTCGGGTTCAAATATCCA+TGG | - | chr7_4:18326239-18326258 | None:intergenic | 40.0% | |
GATATTTGAACCCGAGTATC+CGG | + | chr7_4:18326241-18326260 | Msa1143110:CDS | 40.0% | |
ATATTTGAACCCGAGTATCC+GGG | + | chr7_4:18326242-18326261 | Msa1143110:CDS | 40.0% | |
TCAAATATTCCGCTCTTTCC+CGG | - | chr7_4:18326263-18326282 | None:intergenic | 40.0% | |
GGAAAGAGCGGAATATTTGA+TGG | + | chr7_4:18326263-18326282 | Msa1143110:CDS | 40.0% | |
AAAATACATGGACGTTCCAG+TGG | + | chr7_4:18326365-18326384 | Msa1143110:CDS | 40.0% | |
AACAAGTGCATAATGTCCAC+TGG | - | chr7_4:18326384-18326403 | None:intergenic | 40.0% | |
GTTACACAACAACCCCTTAA+AGG | + | chr7_4:18326401-18326420 | Msa1143110:CDS | 40.0% | |
ACAACAACCCCTTAAAGGAA+GGG | + | chr7_4:18326406-18326425 | Msa1143110:CDS | 40.0% | |
TTGTTTCGCCCTTCCTTTAA+GGG | - | chr7_4:18326417-18326436 | None:intergenic | 40.0% | |
!! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr7_4:18326536-18326555 | Msa1143110:CDS | 40.0% |
GTACTCGGAACTACGATTAT+TGG | + | chr7_4:18326551-18326570 | Msa1143110:CDS | 40.0% | |
AGGAACAATACCTAAACCTG+TGG | + | chr7_4:18326574-18326593 | Msa1143110:CDS | 40.0% | |
ACGAGCAATCGAAAAGATTC+TGG | - | chr7_4:18326605-18326624 | None:intergenic | 40.0% | |
GGAAGTCTTTCTCAGATACA+AGG | - | chr7_4:18326667-18326686 | None:intergenic | 40.0% | |
AGACTTCCAGATTCAAAGGA+AGG | + | chr7_4:18326679-18326698 | Msa1143110:CDS | 40.0% | |
! | GTCACTAAATTCTGAGGAGT+AGG | - | chr7_4:18324547-18324566 | None:intergenic | 40.0% |
CCATGAACTATTTGGGTCAA+TGG | - | chr7_4:18324646-18324665 | None:intergenic | 40.0% | |
CCATTGACCCAAATAGTTCA+TGG | + | chr7_4:18324643-18324662 | Msa1143110:CDS | 40.0% | |
!!! | GAACTGCTAGTTTTCGGATA+CGG | + | chr7_4:18324707-18324726 | Msa1143110:CDS | 40.0% |
!!! | AACTGCTAGTTTTCGGATAC+GGG | + | chr7_4:18324708-18324727 | Msa1143110:CDS | 40.0% |
GATATCCATCCTAGTCACTA+TGG | + | chr7_4:18324730-18324749 | Msa1143110:CDS | 40.0% | |
CATTTGTCCAATTGACACCT+CGG | + | chr7_4:18324756-18324775 | Msa1143110:CDS | 40.0% | |
TGTAGGACTTATTGGATCCT+TGG | + | chr7_4:18324789-18324808 | Msa1143110:CDS | 40.0% | |
! | GAATACTATATGGTAGCGAC+GGG | + | chr7_4:18324919-18324938 | Msa1143110:CDS | 40.0% |
TCTAACTATTGCATGGGAAC+AGG | + | chr7_4:18325011-18325030 | Msa1143110:CDS | 40.0% | |
! | GAAAAGTGCATTGTTGGAAC+TGG | + | chr7_4:18325171-18325190 | Msa1143110:CDS | 40.0% |
TTGCATGCATCAAAAATCCC+AGG | + | chr7_4:18325350-18325369 | Msa1143110:CDS | 40.0% | |
CGCATTTACCTTTATGAACC+TGG | - | chr7_4:18325371-18325390 | None:intergenic | 40.0% | |
TCAGAATTGTAACCTTCCCA+TGG | - | chr7_4:18325480-18325499 | None:intergenic | 40.0% | |
TGTACTCATTAGTGAACGTC+TGG | + | chr7_4:18325506-18325525 | Msa1143110:CDS | 40.0% | |
TAGTGATTCTTTCAGGACCA+TGG | - | chr7_4:18325596-18325615 | None:intergenic | 40.0% | |
! | AGTAAATGGGCTTCTAGATG+TGG | - | chr7_4:18325627-18325646 | None:intergenic | 40.0% |
!! | GAATTGTGATTCTGGGATCT+TGG | + | chr7_4:18325667-18325686 | Msa1143110:CDS | 40.0% |
GGGTAAATTAACGCCTCAAA+TGG | + | chr7_4:18325713-18325732 | Msa1143110:CDS | 40.0% | |
TAATCTATCTTCCGGAGCAT+AGG | - | chr7_4:18325751-18325770 | None:intergenic | 40.0% | |
AAACTACCTATAGGTGGTAG+GGG | + | chr7_4:18325822-18325841 | Msa1143110:CDS | 40.0% | |
AAAGTAGGTGATAAAGTGGC+CGG | + | chr7_4:18325939-18325958 | Msa1143110:CDS | 40.0% | |
! | ACCTTTATTTCCATGTCTCC+CGG | - | chr7_4:18325961-18325980 | None:intergenic | 40.0% |
GGTCTTCCATCTTGCAAATA+AGG | - | chr7_4:18326017-18326036 | None:intergenic | 40.0% | |
! | TGGGTTGAAGACCATATCAA+CGG | - | chr7_4:18326039-18326058 | None:intergenic | 40.0% |
GATATGGTCTTCAACCCATT+AGG | + | chr7_4:18326041-18326060 | Msa1143110:CDS | 40.0% | |
TATGGTCTTCAACCCATTAG+GGG | + | chr7_4:18326043-18326062 | Msa1143110:CDS | 40.0% | |
TGTCCTACATTCATTCGTGA+GGG | - | chr7_4:18326071-18326090 | None:intergenic | 40.0% | |
!! | AATGTTCACTCGGATTAGCT+GGG | + | chr7_4:18326099-18326118 | Msa1143110:CDS | 40.0% |
TGATGAGAGATATGAACAGG+AGG | + | chr7_4:18326157-18326176 | Msa1143110:CDS | 40.0% | |
TACTCGGGTTCAAATATCCA+TGG | - | chr7_4:18326239-18326258 | None:intergenic | 40.0% | |
GATATTTGAACCCGAGTATC+CGG | + | chr7_4:18326241-18326260 | Msa1143110:CDS | 40.0% | |
ATATTTGAACCCGAGTATCC+GGG | + | chr7_4:18326242-18326261 | Msa1143110:CDS | 40.0% | |
TCAAATATTCCGCTCTTTCC+CGG | - | chr7_4:18326263-18326282 | None:intergenic | 40.0% | |
GGAAAGAGCGGAATATTTGA+TGG | + | chr7_4:18326263-18326282 | Msa1143110:CDS | 40.0% | |
AAAATACATGGACGTTCCAG+TGG | + | chr7_4:18326365-18326384 | Msa1143110:CDS | 40.0% | |
AACAAGTGCATAATGTCCAC+TGG | - | chr7_4:18326384-18326403 | None:intergenic | 40.0% | |
GTTACACAACAACCCCTTAA+AGG | + | chr7_4:18326401-18326420 | Msa1143110:CDS | 40.0% | |
ACAACAACCCCTTAAAGGAA+GGG | + | chr7_4:18326406-18326425 | Msa1143110:CDS | 40.0% | |
TTGTTTCGCCCTTCCTTTAA+GGG | - | chr7_4:18326417-18326436 | None:intergenic | 40.0% | |
!! | AAAGCTCGTCAAGAAGTACT+CGG | + | chr7_4:18326536-18326555 | Msa1143110:CDS | 40.0% |
GTACTCGGAACTACGATTAT+TGG | + | chr7_4:18326551-18326570 | Msa1143110:CDS | 40.0% | |
AGGAACAATACCTAAACCTG+TGG | + | chr7_4:18326574-18326593 | Msa1143110:CDS | 40.0% | |
ACGAGCAATCGAAAAGATTC+TGG | - | chr7_4:18326605-18326624 | None:intergenic | 40.0% | |
GGAAGTCTTTCTCAGATACA+AGG | - | chr7_4:18326667-18326686 | None:intergenic | 40.0% | |
AGACTTCCAGATTCAAAGGA+AGG | + | chr7_4:18326679-18326698 | Msa1143110:CDS | 40.0% | |
GCAGCTGTCAATATATCTCG+CGG | - | chr7_4:18324346-18324365 | None:intergenic | 45.0% | |
GCGAGATATATTGACAGCTG+CGG | + | chr7_4:18324345-18324364 | Msa1143110:CDS | 45.0% | |
ACAGCTGCGGATCATTTGAT+TGG | + | chr7_4:18324358-18324377 | Msa1143110:CDS | 45.0% | |
TTGAGTTATTTGGGTCCTGG+AGG | + | chr7_4:18324673-18324692 | Msa1143110:CDS | 45.0% | |
CAAATGCGTCCATAGTGACT+AGG | - | chr7_4:18324742-18324761 | None:intergenic | 45.0% | |
! | ATTCCTTCCGAGGTGTCAAT+TGG | - | chr7_4:18324766-18324785 | None:intergenic | 45.0% |
ACCTCGGAAGGAATCAATGT+AGG | + | chr7_4:18324772-18324791 | Msa1143110:CDS | 45.0% | |
!! | TCCTACATTGATTCCTTCCG+AGG | - | chr7_4:18324776-18324795 | None:intergenic | 45.0% |
AATCCTTGCGTGAATTGCCA+AGG | - | chr7_4:18324809-18324828 | None:intergenic | 45.0% | |
TTGGCAATTCACGCAAGGAT+TGG | + | chr7_4:18324808-18324827 | Msa1143110:CDS | 45.0% | |
! | AGCACTGAATCGAGGTATTC+AGG | + | chr7_4:18324951-18324970 | Msa1143110:CDS | 45.0% |
! | ACTGAATCGAGGTATTCAGG+AGG | + | chr7_4:18324954-18324973 | Msa1143110:CDS | 45.0% |
! | AATTCTTGACGGTATCGAGC+TGG | - | chr7_4:18324991-18325010 | None:intergenic | 45.0% |
GTCAAGCAGTTCCTCTTTCT+CGG | + | chr7_4:18325145-18325164 | Msa1143110:CDS | 45.0% | |
GTGCATTGTTGGAACTGGAT+TGG | + | chr7_4:18325176-18325195 | Msa1143110:CDS | 45.0% | |
AACGATCTTTCCTGCGTGTT+CGG | - | chr7_4:18325241-18325260 | None:intergenic | 45.0% | |
GTAGCTTATATGCCATGGGA+AGG | + | chr7_4:18325465-18325484 | Msa1143110:CDS | 45.0% | |
TGGGATCTTGGGTAGAAACA+GGG | + | chr7_4:18325679-18325698 | Msa1143110:CDS | 45.0% | |
GAGGATTCTTTCGCCATTTG+AGG | - | chr7_4:18325729-18325748 | None:intergenic | 45.0% | |
GAAAGAATCCTCCTATGCTC+CGG | + | chr7_4:18325737-18325756 | Msa1143110:CDS | 45.0% | |
ACGAGCTATACTTGGGATTC+AGG | + | chr7_4:18325773-18325792 | Msa1143110:CDS | 45.0% | |
!! | GATTCAGGTATCGACCTCAA+AGG | + | chr7_4:18325788-18325807 | Msa1143110:CDS | 45.0% |
GCCGAGTTATTGATGTGAGA+TGG | + | chr7_4:18325844-18325863 | Msa1143110:CDS | 45.0% | |
AAGTAGGTGATAAAGTGGCC+GGG | + | chr7_4:18325940-18325959 | Msa1143110:CDS | 45.0% | |
AGATGGAAGACCCGTTGATA+TGG | + | chr7_4:18326025-18326044 | Msa1143110:CDS | 45.0% | |
GGGTTGAAGACCATATCAAC+GGG | - | chr7_4:18326038-18326057 | None:intergenic | 45.0% | |
GTACCCTCACGAATGAATGT+AGG | + | chr7_4:18326065-18326084 | Msa1143110:CDS | 45.0% | |
CTGTCCTACATTCATTCGTG+AGG | - | chr7_4:18326072-18326091 | None:intergenic | 45.0% | |
!! | GAATGTTCACTCGGATTAGC+TGG | + | chr7_4:18326098-18326117 | Msa1143110:CDS | 45.0% |
CACAACAACCCCTTAAAGGA+AGG | + | chr7_4:18326405-18326424 | Msa1143110:CDS | 45.0% | |
TGTTTCGCCCTTCCTTTAAG+GGG | - | chr7_4:18326416-18326435 | None:intergenic | 45.0% | |
CTTGTTTCGCCCTTCCTTTA+AGG | - | chr7_4:18326418-18326437 | None:intergenic | 45.0% | |
CTTAAAGGAAGGGCGAAACA+AGG | + | chr7_4:18326416-18326435 | Msa1143110:CDS | 45.0% | |
CTCGGAACTACGATTATTGG+AGG | + | chr7_4:18326554-18326573 | Msa1143110:CDS | 45.0% | |
!! | AAAGATTCTGGAGCATCCAC+AGG | - | chr7_4:18326593-18326612 | None:intergenic | 45.0% |
CGTTCGAGAACTACGATCTT+TGG | + | chr7_4:18326622-18326641 | Msa1143110:CDS | 45.0% | |
! | AGAACTACGATCTTTGGCTC+TGG | + | chr7_4:18326628-18326647 | Msa1143110:CDS | 45.0% |
GCAGCTGTCAATATATCTCG+CGG | - | chr7_4:18324346-18324365 | None:intergenic | 45.0% | |
GCGAGATATATTGACAGCTG+CGG | + | chr7_4:18324345-18324364 | Msa1143110:CDS | 45.0% | |
ACAGCTGCGGATCATTTGAT+TGG | + | chr7_4:18324358-18324377 | Msa1143110:CDS | 45.0% | |
TTGAGTTATTTGGGTCCTGG+AGG | + | chr7_4:18324673-18324692 | Msa1143110:CDS | 45.0% | |
CAAATGCGTCCATAGTGACT+AGG | - | chr7_4:18324742-18324761 | None:intergenic | 45.0% | |
! | ATTCCTTCCGAGGTGTCAAT+TGG | - | chr7_4:18324766-18324785 | None:intergenic | 45.0% |
ACCTCGGAAGGAATCAATGT+AGG | + | chr7_4:18324772-18324791 | Msa1143110:CDS | 45.0% | |
!! | TCCTACATTGATTCCTTCCG+AGG | - | chr7_4:18324776-18324795 | None:intergenic | 45.0% |
AATCCTTGCGTGAATTGCCA+AGG | - | chr7_4:18324809-18324828 | None:intergenic | 45.0% | |
TTGGCAATTCACGCAAGGAT+TGG | + | chr7_4:18324808-18324827 | Msa1143110:CDS | 45.0% | |
! | AGCACTGAATCGAGGTATTC+AGG | + | chr7_4:18324951-18324970 | Msa1143110:CDS | 45.0% |
! | ACTGAATCGAGGTATTCAGG+AGG | + | chr7_4:18324954-18324973 | Msa1143110:CDS | 45.0% |
! | AATTCTTGACGGTATCGAGC+TGG | - | chr7_4:18324991-18325010 | None:intergenic | 45.0% |
GTCAAGCAGTTCCTCTTTCT+CGG | + | chr7_4:18325145-18325164 | Msa1143110:CDS | 45.0% | |
GTGCATTGTTGGAACTGGAT+TGG | + | chr7_4:18325176-18325195 | Msa1143110:CDS | 45.0% | |
AACGATCTTTCCTGCGTGTT+CGG | - | chr7_4:18325241-18325260 | None:intergenic | 45.0% | |
GTAGCTTATATGCCATGGGA+AGG | + | chr7_4:18325465-18325484 | Msa1143110:CDS | 45.0% | |
TGGGATCTTGGGTAGAAACA+GGG | + | chr7_4:18325679-18325698 | Msa1143110:CDS | 45.0% | |
GAGGATTCTTTCGCCATTTG+AGG | - | chr7_4:18325729-18325748 | None:intergenic | 45.0% | |
GAAAGAATCCTCCTATGCTC+CGG | + | chr7_4:18325737-18325756 | Msa1143110:CDS | 45.0% | |
ACGAGCTATACTTGGGATTC+AGG | + | chr7_4:18325773-18325792 | Msa1143110:CDS | 45.0% | |
!! | GATTCAGGTATCGACCTCAA+AGG | + | chr7_4:18325788-18325807 | Msa1143110:CDS | 45.0% |
GCCGAGTTATTGATGTGAGA+TGG | + | chr7_4:18325844-18325863 | Msa1143110:CDS | 45.0% | |
AAGTAGGTGATAAAGTGGCC+GGG | + | chr7_4:18325940-18325959 | Msa1143110:CDS | 45.0% | |
AGATGGAAGACCCGTTGATA+TGG | + | chr7_4:18326025-18326044 | Msa1143110:CDS | 45.0% | |
GGGTTGAAGACCATATCAAC+GGG | - | chr7_4:18326038-18326057 | None:intergenic | 45.0% | |
GTACCCTCACGAATGAATGT+AGG | + | chr7_4:18326065-18326084 | Msa1143110:CDS | 45.0% | |
CTGTCCTACATTCATTCGTG+AGG | - | chr7_4:18326072-18326091 | None:intergenic | 45.0% | |
!! | GAATGTTCACTCGGATTAGC+TGG | + | chr7_4:18326098-18326117 | Msa1143110:CDS | 45.0% |
CACAACAACCCCTTAAAGGA+AGG | + | chr7_4:18326405-18326424 | Msa1143110:CDS | 45.0% | |
TGTTTCGCCCTTCCTTTAAG+GGG | - | chr7_4:18326416-18326435 | None:intergenic | 45.0% | |
CTTGTTTCGCCCTTCCTTTA+AGG | - | chr7_4:18326418-18326437 | None:intergenic | 45.0% | |
CTTAAAGGAAGGGCGAAACA+AGG | + | chr7_4:18326416-18326435 | Msa1143110:CDS | 45.0% | |
CTCGGAACTACGATTATTGG+AGG | + | chr7_4:18326554-18326573 | Msa1143110:CDS | 45.0% | |
!! | AAAGATTCTGGAGCATCCAC+AGG | - | chr7_4:18326593-18326612 | None:intergenic | 45.0% |
CGTTCGAGAACTACGATCTT+TGG | + | chr7_4:18326622-18326641 | Msa1143110:CDS | 45.0% | |
! | AGAACTACGATCTTTGGCTC+TGG | + | chr7_4:18326628-18326647 | Msa1143110:CDS | 45.0% |
TTTGGGTCCTGGAGGATTGA+CGG | + | chr7_4:18324681-18324700 | Msa1143110:CDS | 50.0% | |
TGCGTCCATAGTGACTAGGA+TGG | - | chr7_4:18324738-18324757 | None:intergenic | 50.0% | |
TGTCCAATTGACACCTCGGA+AGG | + | chr7_4:18324760-18324779 | Msa1143110:CDS | 50.0% | |
GATCCTTGGCAATTCACGCA+AGG | + | chr7_4:18324803-18324822 | Msa1143110:CDS | 50.0% | |
!! | TTCACGCAAGGATTGGTCCT+TGG | + | chr7_4:18324815-18324834 | Msa1143110:CDS | 50.0% |
!! | TCACGCAAGGATTGGTCCTT+GGG | + | chr7_4:18324816-18324835 | Msa1143110:CDS | 50.0% |
GGACTTTCTATAGACCCCCA+AGG | - | chr7_4:18324835-18324854 | None:intergenic | 50.0% | |
! | CACTTTTCGGACCGAGAAAG+AGG | - | chr7_4:18325159-18325178 | None:intergenic | 50.0% |
! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr7_4:18325165-18325184 | Msa1143110:CDS | 50.0% |
! | AACTGGATTGGAACGCCAAG+TGG | + | chr7_4:18325188-18325207 | Msa1143110:CDS | 50.0% |
! | CTCCTGAATCTAAGGCCACT+TGG | - | chr7_4:18325206-18325225 | None:intergenic | 50.0% |
AGCGGGAACTCCTGAATCTA+AGG | - | chr7_4:18325214-18325233 | None:intergenic | 50.0% | |
CAGACTCATGTGACAAGCCA+TGG | + | chr7_4:18325576-18325595 | Msa1143110:CDS | 50.0% | |
CTGGGATCTTGGGTAGAAAC+AGG | + | chr7_4:18325678-18325697 | Msa1143110:CDS | 50.0% | |
GGGATCTTGGGTAGAAACAG+GGG | + | chr7_4:18325680-18325699 | Msa1143110:CDS | 50.0% | |
TCTATCTTCCGGAGCATAGG+AGG | - | chr7_4:18325748-18325767 | None:intergenic | 50.0% | |
GCCGGGAGACATGGAAATAA+AGG | + | chr7_4:18325957-18325976 | Msa1143110:CDS | 50.0% | |
!! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr7_4:18326058-18326077 | None:intergenic | 50.0% |
!! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr7_4:18326059-18326078 | None:intergenic | 50.0% |
AAAGGAAGGGCGAAACAAGG+AGG | + | chr7_4:18326419-18326438 | Msa1143110:CDS | 50.0% | |
AAACAAGGAGGACAACGGGT+AGG | + | chr7_4:18326431-18326450 | Msa1143110:CDS | 50.0% | |
GGTAGGCGAAATGGAGGTTT+GGG | + | chr7_4:18326448-18326467 | Msa1143110:CDS | 50.0% | |
! | TCTGGAGCATCCACAGGTTT+AGG | - | chr7_4:18326587-18326606 | None:intergenic | 50.0% |
TTTGGGTCCTGGAGGATTGA+CGG | + | chr7_4:18324681-18324700 | Msa1143110:CDS | 50.0% | |
TGCGTCCATAGTGACTAGGA+TGG | - | chr7_4:18324738-18324757 | None:intergenic | 50.0% | |
TGTCCAATTGACACCTCGGA+AGG | + | chr7_4:18324760-18324779 | Msa1143110:CDS | 50.0% | |
GATCCTTGGCAATTCACGCA+AGG | + | chr7_4:18324803-18324822 | Msa1143110:CDS | 50.0% | |
!! | TTCACGCAAGGATTGGTCCT+TGG | + | chr7_4:18324815-18324834 | Msa1143110:CDS | 50.0% |
!! | TCACGCAAGGATTGGTCCTT+GGG | + | chr7_4:18324816-18324835 | Msa1143110:CDS | 50.0% |
GGACTTTCTATAGACCCCCA+AGG | - | chr7_4:18324835-18324854 | None:intergenic | 50.0% | |
! | CACTTTTCGGACCGAGAAAG+AGG | - | chr7_4:18325159-18325178 | None:intergenic | 50.0% |
! | CGGTCCGAAAAGTGCATTGT+TGG | + | chr7_4:18325165-18325184 | Msa1143110:CDS | 50.0% |
! | AACTGGATTGGAACGCCAAG+TGG | + | chr7_4:18325188-18325207 | Msa1143110:CDS | 50.0% |
! | CTCCTGAATCTAAGGCCACT+TGG | - | chr7_4:18325206-18325225 | None:intergenic | 50.0% |
AGCGGGAACTCCTGAATCTA+AGG | - | chr7_4:18325214-18325233 | None:intergenic | 50.0% | |
CAGACTCATGTGACAAGCCA+TGG | + | chr7_4:18325576-18325595 | Msa1143110:CDS | 50.0% | |
CTGGGATCTTGGGTAGAAAC+AGG | + | chr7_4:18325678-18325697 | Msa1143110:CDS | 50.0% | |
GGGATCTTGGGTAGAAACAG+GGG | + | chr7_4:18325680-18325699 | Msa1143110:CDS | 50.0% | |
TCTATCTTCCGGAGCATAGG+AGG | - | chr7_4:18325748-18325767 | None:intergenic | 50.0% | |
GCCGGGAGACATGGAAATAA+AGG | + | chr7_4:18325957-18325976 | Msa1143110:CDS | 50.0% | |
!! | TTCGTGAGGGTACCCCTAAT+GGG | - | chr7_4:18326058-18326077 | None:intergenic | 50.0% |
!! | ATTCGTGAGGGTACCCCTAA+TGG | - | chr7_4:18326059-18326078 | None:intergenic | 50.0% |
AAAGGAAGGGCGAAACAAGG+AGG | + | chr7_4:18326419-18326438 | Msa1143110:CDS | 50.0% | |
AAACAAGGAGGACAACGGGT+AGG | + | chr7_4:18326431-18326450 | Msa1143110:CDS | 50.0% | |
GGTAGGCGAAATGGAGGTTT+GGG | + | chr7_4:18326448-18326467 | Msa1143110:CDS | 50.0% | |
! | TCTGGAGCATCCACAGGTTT+AGG | - | chr7_4:18326587-18326606 | None:intergenic | 50.0% |
TTGGGTCCTGGAGGATTGAC+GGG | + | chr7_4:18324682-18324701 | Msa1143110:CDS | 55.0% | |
!!! | CGGGGCGAACTGCTAGTTTT+CGG | + | chr7_4:18324701-18324720 | Msa1143110:CDS | 55.0% |
!! | CACGCAAGGATTGGTCCTTG+GGG | + | chr7_4:18324817-18324836 | Msa1143110:CDS | 55.0% |
!! | ACGCAAGGATTGGTCCTTGG+GGG | + | chr7_4:18324818-18324837 | Msa1143110:CDS | 55.0% |
! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr7_4:18325201-18325220 | Msa1143110:CDS | 55.0% |
TCCTGCGTGTTCGGCTATAG+CGG | - | chr7_4:18325232-18325251 | None:intergenic | 55.0% | |
!! | GCAGATGGTGCTGCTACTGT+TGG | + | chr7_4:18325411-18325430 | Msa1143110:CDS | 55.0% |
!! | GATGGTGCTGCTACTGTTGG+CGG | + | chr7_4:18325414-18325433 | Msa1143110:CDS | 55.0% |
TGTTGGCGGTGAACTCGCTT+TGG | + | chr7_4:18325428-18325447 | Msa1143110:CDS | 55.0% | |
GTTGGCGGTGAACTCGCTTT+GGG | + | chr7_4:18325429-18325448 | Msa1143110:CDS | 55.0% | |
GATAAAGTGGCCGGGAGACA+TGG | + | chr7_4:18325948-18325967 | Msa1143110:CDS | 55.0% | |
TCCGCTCTTTCCCGGATACT+CGG | - | chr7_4:18326255-18326274 | None:intergenic | 55.0% | |
GGGCGAAACAAGGAGGACAA+CGG | + | chr7_4:18326426-18326445 | Msa1143110:CDS | 55.0% | |
GGCGAAACAAGGAGGACAAC+GGG | + | chr7_4:18326427-18326446 | Msa1143110:CDS | 55.0% | |
AGGACAACGGGTAGGCGAAA+TGG | + | chr7_4:18326439-18326458 | Msa1143110:CDS | 55.0% | |
ACAACGGGTAGGCGAAATGG+AGG | + | chr7_4:18326442-18326461 | Msa1143110:CDS | 55.0% | |
GGGTAGGCGAAATGGAGGTT+TGG | + | chr7_4:18326447-18326466 | Msa1143110:CDS | 55.0% | |
TTGGGTCCTGGAGGATTGAC+GGG | + | chr7_4:18324682-18324701 | Msa1143110:CDS | 55.0% | |
!!! | CGGGGCGAACTGCTAGTTTT+CGG | + | chr7_4:18324701-18324720 | Msa1143110:CDS | 55.0% |
!! | CACGCAAGGATTGGTCCTTG+GGG | + | chr7_4:18324817-18324836 | Msa1143110:CDS | 55.0% |
!! | ACGCAAGGATTGGTCCTTGG+GGG | + | chr7_4:18324818-18324837 | Msa1143110:CDS | 55.0% |
! | CGCCAAGTGGCCTTAGATTC+AGG | + | chr7_4:18325201-18325220 | Msa1143110:CDS | 55.0% |
TCCTGCGTGTTCGGCTATAG+CGG | - | chr7_4:18325232-18325251 | None:intergenic | 55.0% | |
!! | GCAGATGGTGCTGCTACTGT+TGG | + | chr7_4:18325411-18325430 | Msa1143110:CDS | 55.0% |
!! | GATGGTGCTGCTACTGTTGG+CGG | + | chr7_4:18325414-18325433 | Msa1143110:CDS | 55.0% |
TGTTGGCGGTGAACTCGCTT+TGG | + | chr7_4:18325428-18325447 | Msa1143110:CDS | 55.0% | |
GTTGGCGGTGAACTCGCTTT+GGG | + | chr7_4:18325429-18325448 | Msa1143110:CDS | 55.0% | |
GATAAAGTGGCCGGGAGACA+TGG | + | chr7_4:18325948-18325967 | Msa1143110:CDS | 55.0% | |
TCCGCTCTTTCCCGGATACT+CGG | - | chr7_4:18326255-18326274 | None:intergenic | 55.0% | |
GGGCGAAACAAGGAGGACAA+CGG | + | chr7_4:18326426-18326445 | Msa1143110:CDS | 55.0% | |
GGCGAAACAAGGAGGACAAC+GGG | + | chr7_4:18326427-18326446 | Msa1143110:CDS | 55.0% | |
AGGACAACGGGTAGGCGAAA+TGG | + | chr7_4:18326439-18326458 | Msa1143110:CDS | 55.0% | |
ACAACGGGTAGGCGAAATGG+AGG | + | chr7_4:18326442-18326461 | Msa1143110:CDS | 55.0% | |
GGGTAGGCGAAATGGAGGTT+TGG | + | chr7_4:18326447-18326466 | Msa1143110:CDS | 55.0% | |
TGGGTCCTGGAGGATTGACG+GGG | + | chr7_4:18324683-18324702 | Msa1143110:CDS | 60.0% | |
CCTGCGTGTTCGGCTATAGC+GGG | - | chr7_4:18325231-18325250 | None:intergenic | 60.0% | |
ACTCGGCCCCTACCACCTAT+AGG | - | chr7_4:18325831-18325850 | None:intergenic | 60.0% | |
CCGCTCTTTCCCGGATACTC+GGG | - | chr7_4:18326254-18326273 | None:intergenic | 60.0% | |
CCCGAGTATCCGGGAAAGAG+CGG | + | chr7_4:18326251-18326270 | Msa1143110:CDS | 60.0% | |
AATGGAGGTTTGGGCGCTCG+AGG | + | chr7_4:18326457-18326476 | Msa1143110:CDS | 60.0% | |
ATGGAGGTTTGGGCGCTCGA+GGG | + | chr7_4:18326458-18326477 | Msa1143110:CDS | 60.0% | |
TGGGTCCTGGAGGATTGACG+GGG | + | chr7_4:18324683-18324702 | Msa1143110:CDS | 60.0% | |
CCTGCGTGTTCGGCTATAGC+GGG | - | chr7_4:18325231-18325250 | None:intergenic | 60.0% | |
ACTCGGCCCCTACCACCTAT+AGG | - | chr7_4:18325831-18325850 | None:intergenic | 60.0% | |
CCGCTCTTTCCCGGATACTC+GGG | - | chr7_4:18326254-18326273 | None:intergenic | 60.0% | |
CCCGAGTATCCGGGAAAGAG+CGG | + | chr7_4:18326251-18326270 | Msa1143110:CDS | 60.0% | |
AATGGAGGTTTGGGCGCTCG+AGG | + | chr7_4:18326457-18326476 | Msa1143110:CDS | 60.0% | |
ATGGAGGTTTGGGCGCTCGA+GGG | + | chr7_4:18326458-18326477 | Msa1143110:CDS | 60.0% | |
GTTCGCCCCGTCAATCCTCC+AGG | - | chr7_4:18324691-18324710 | None:intergenic | 65.0% | |
CCCGCTATAGCCGAACACGC+AGG | + | chr7_4:18325228-18325247 | Msa1143110:CDS | 65.0% | |
TGGAGGTTTGGGCGCTCGAG+GGG | + | chr7_4:18326459-18326478 | Msa1143110:CDS | 65.0% | |
GTTTGGGCGCTCGAGGGGTT+CGG | + | chr7_4:18326464-18326483 | Msa1143110:CDS | 65.0% | |
GTTCGCCCCGTCAATCCTCC+AGG | - | chr7_4:18324691-18324710 | None:intergenic | 65.0% | |
CCCGCTATAGCCGAACACGC+AGG | + | chr7_4:18325228-18325247 | Msa1143110:CDS | 65.0% | |
TGGAGGTTTGGGCGCTCGAG+GGG | + | chr7_4:18326459-18326478 | Msa1143110:CDS | 65.0% | |
GTTTGGGCGCTCGAGGGGTT+CGG | + | chr7_4:18326464-18326483 | Msa1143110:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 18324292 | 18326709 | 18324292 | ID=Msa1143110;Name=Msa1143110 |
chr7_4 | mRNA | 18324292 | 18326709 | 18324292 | ID=Msa1143110-mRNA-1;Parent=Msa1143110;Name=Msa1143110-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|805 |
chr7_4 | exon | 18324292 | 18326709 | 18324292 | ID=Msa1143110-mRNA-1:exon:4072;Parent=Msa1143110-mRNA-1 |
chr7_4 | CDS | 18324292 | 18326709 | 18324292 | ID=Msa1143110-mRNA-1:cds;Parent=Msa1143110-mRNA-1 |
Gene Sequence |
Protein sequence |