AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0268990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268990 MtrunA17_Chr3g0108441 98.649 370 3 1 216 583 61 430 0.0 741
Msa0268990 MtrunA17_Chr3g0108491 90.191 418 27 5 168 583 25 430 0.0 740
Msa0268990 MtrunA17_CPg0493021 90.191 418 27 5 168 583 25 430 0.0 740
Msa0268990 MtrunA17_Chr4g0016661 90.191 418 27 5 168 583 25 430 0.0 740
Msa0268990 MtrunA17_CPg0493001 99.303 287 2 0 584 870 7 293 0.0 586
Msa0268990 MtrunA17_Chr4g0016671 99.303 287 2 0 584 870 7 293 0.0 586
Msa0268990 MtrunA17_Chr8g0342181 60.767 339 58 4 245 583 1 264 8.74e-119 363
Msa0268990 MtrunA17_Chr4g0015581 99.429 175 1 0 696 870 1 175 7.39e-116 358
Msa0268990 MtrunA17_Chr4g0015551 75.000 212 8 1 271 482 5 171 1.52e-96 300
Msa0268990 MtrunA17_Chr3g0096371 95.652 115 5 0 323 437 1 115 1.10e-69 226
Msa0268990 MtrunA17_Chr1g0159041 57.143 210 19 3 5 143 98 307 5.88e-61 210
Msa0268990 MtrunA17_Chr4g0016641 72.549 153 10 2 92 213 834 985 1.28e-58 218
Msa0268990 MtrunA17_Chr4g0016641 67.910 134 7 2 3 100 638 771 5.29e-41 163
Msa0268990 MtrunA17_CPg0493041 72.549 153 10 2 92 213 834 985 1.28e-58 218
Msa0268990 MtrunA17_CPg0493041 67.910 134 7 2 3 100 638 771 5.29e-41 163
Msa0268990 MtrunA17_Chr4g0002751 82.796 93 16 0 283 375 1 93 6.41e-44 154
Msa0268990 MtrunA17_Chr4g0015541 70.248 121 4 2 124 213 1 120 1.10e-43 160
Msa0268990 MtrunA17_Chr2g0318321 95.652 69 3 0 584 652 26 94 7.57e-39 139
Msa0268990 MtrunA17_Chr4g0030401 28.247 308 191 6 295 578 248 549 1.63e-29 127
Msa0268990 MtrunA17_Chr4g0030391 29.126 309 187 6 295 578 247 548 1.89e-29 126
Msa0268990 MtrunA17_Chr4g0015571 100.000 44 0 0 584 627 7 50 1.23e-23 94.7
Msa0268990 MtrunA17_Chr7g0247561 88.462 52 4 1 3 54 14 63 1.44e-23 95.1
Msa0268990 MtrunA17_Chr5g0406121 28.526 312 190 6 296 578 241 548 4.23e-23 106
Msa0268990 MtrunA17_Chr4g0044991 25.949 316 183 7 306 578 317 624 7.58e-20 95.9
Msa0268990 MtrunA17_Chr4g0002761 65.455 55 19 0 530 584 1 55 1.99e-15 72.0
Msa0268990 MtrunA17_Chr8g0353071 28.053 303 186 10 300 577 211 506 1.54e-12 72.0
Msa0268990 MtrunA17_Chr1g0155911 30.818 159 88 6 100 238 961 1117 1.59e-12 72.0
Msa0268990 MtrunA17_Chr4g0015531 96.774 31 1 0 3 33 264 294 2.34e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268990 ATCG00180.1 92.412 369 26 1 215 583 182 548 0.0 701
Msa0268990 ATCG00170.1 91.003 289 24 1 584 870 3 291 8.64e-173 538
Msa0268990 ATCG00190.1 69.281 153 15 2 92 213 831 982 7.36e-57 213
Msa0268990 ATCG00190.1 63.235 136 10 2 3 100 635 768 1.30e-37 153
Msa0268990 AT5G60040.1 28.710 310 188 5 296 578 250 553 3.37e-28 123
Msa0268990 AT5G60040.2 28.710 310 188 5 296 578 260 563 4.90e-28 122
Msa0268990 AT4G35800.2 28.710 310 192 5 296 578 242 549 3.69e-24 110
Msa0268990 AT4G35800.1 28.710 310 192 5 296 578 242 549 3.69e-24 110
Msa0268990 AT3G57660.2 24.806 387 215 12 306 646 335 691 7.35e-18 89.7
Msa0268990 AT3G57660.1 24.806 387 215 12 306 646 348 704 8.96e-18 89.7
Msa0268990 AT1G63020.4 23.007 439 285 13 174 577 80 500 1.99e-14 78.6
Msa0268990 AT1G63020.1 23.007 439 285 13 174 577 80 500 2.02e-14 78.6
Msa0268990 AT1G63020.2 23.007 439 285 13 174 577 80 500 2.02e-14 78.6
Msa0268990 AT1G63020.3 23.007 439 285 13 174 577 80 500 2.18e-14 78.6
Msa0268990 AT4G21710.1 31.447 159 87 6 100 238 958 1114 2.81e-13 74.7
Msa0268990 AT1G63020.5 27.749 191 122 3 403 577 2 192 6.90e-13 73.6
Msa0268990 AT2G40030.2 29.016 193 121 3 401 577 310 502 2.37e-11 68.6
Msa0268990 AT2G40030.1 29.016 193 121 3 401 577 310 502 2.40e-11 68.6
Msa0268990 AT5G45140.2 32.609 138 71 3 96 212 929 1065 3.27e-11 68.2
Msa0268990 AT5G45140.1 32.609 138 71 3 96 212 929 1065 3.27e-11 68.2

Find 233 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGTTTCGCCCTTCTTTA+AGG 0.087648 2_2:+70471563 None:intergenic
TTGTCTAATTTCGGAGTAAA+TGG 0.149640 2_2:+70472335 None:intergenic
GTTTGTATCAAAATTCTTTC+TGG 0.155430 2_2:+70467514 None:intergenic
TTCTGGTATCATTCCATTTC+GGG 0.158141 2_2:+70467531 None:intergenic
TGAACAACAAAGTTCTATTT+TGG 0.177929 2_2:-70467995 Msa0268990:CDS
TCTGGATTTAAGAATTATTA+TGG 0.190370 2_2:-70469845 Msa0268990:CDS
TGGATTCGATGTTTGTTTAC+TGG 0.222331 2_2:+70471762 None:intergenic
TCTGCTAATAAGTCGTTTAA+TGG 0.223864 2_2:+70468167 None:intergenic
ACCTCTTGTCTCCGGCTATT+GGG 0.225839 2_2:-70468901 Msa0268990:CDS
CATAAGGTAAATGCGTAAAA+AGG 0.239444 2_2:-70472594 None:intergenic
TTTGAACAGCCTGTTATAAT+AGG 0.245428 2_2:-70471676 Msa0268990:CDS
TGAATTAATTTCAAGATATA+AGG 0.248171 2_2:+70471649 None:intergenic
ATCCTCTCATTCCGACTAAT+TGG 0.248879 2_2:+70467788 None:intergenic
ACAAAATGGAATTGTGATTC+TGG 0.252914 2_2:-70472316 Msa0268990:CDS
TACTCCGAAATTAGACAAAA+TGG 0.253226 2_2:-70472330 Msa0268990:CDS
TGTTCATGTGCCTTTATCTT+TGG 0.264426 2_2:-70468966 Msa0268990:CDS
ACGAGCTATACTTGGGATTC+AGG 0.269809 2_2:-70472202 Msa0268990:intron
CCAACTCAAGATATGCTTAT+AGG 0.271742 2_2:-70468863 Msa0268990:CDS
CTTGTTTCGCCCTTCTTTAA+GGG 0.271921 2_2:+70471564 None:intergenic
CATTATATGGACTGGATTAA+AGG 0.289410 2_2:+70467849 None:intergenic
AACCTCTTGTCTCCGGCTAT+TGG 0.290298 2_2:-70468902 Msa0268990:CDS
GGTCTTCCATCTTGCAAATA+AGG 0.291965 2_2:+70471963 None:intergenic
GCACGTCCTTCTACTAAAAT+AGG 0.292699 2_2:+70469052 None:intergenic
GGATCTGCCGATTGTGTTAT+GGG 0.297223 2_2:-70467334 Msa0268990:CDS
TTTCTGGTATCATTCCATTT+CGG 0.299397 2_2:+70467530 None:intergenic
TAGATCTACTTGTTGTTAAT+AGG 0.299908 2_2:+70469530 None:intergenic
TGGATCTGCCGATTGTGTTA+TGG 0.301508 2_2:-70467335 Msa0268990:CDS
GGGTCAGTCATCCTAAAATT+AGG 0.301712 2_2:+70467871 None:intergenic
ATTCGTGAGGGTACCCCTAA+TGG 0.306675 2_2:+70471921 None:intergenic
AGCGCCTACTTTGCATAGAT+TGG 0.308716 2_2:-70469092 Msa0268990:CDS
CCTCCATCTATTTGAATAAT+CGG 0.310599 2_2:+70469622 None:intergenic
TTGGTAGAATGGAAAGAATT+AGG 0.313946 2_2:-70469814 Msa0268990:CDS
TCAAATATTCCGCTCTTTCC+CGG 0.314064 2_2:+70471718 None:intergenic
TTCTCGTAAATTGCTTTGAA+TGG 0.322270 2_2:+70467729 None:intergenic
TTTACATCCATTAGTGTGTA+AGG 0.327520 2_2:-70469023 Msa0268990:CDS
TGTTGGCGGTGAACTCGCTT+TGG 0.329325 2_2:-70472543 Msa0268990:CDS
CAGTATCCACAACCCCTTTA+CGG 0.329838 2_2:+70467665 None:intergenic
AACTTTGTTGTTCAGCATCT+TGG 0.334259 2_2:+70468004 None:intergenic
AGAAATCAAGATATTGGAAT+TGG 0.334567 2_2:-70467433 Msa0268990:CDS
GGAATATTTGATGGAAGAAC+AGG 0.334674 2_2:-70471706 Msa0268990:CDS
TACGCCAATCCATTGAAATA+TGG 0.339395 2_2:-70467930 Msa0268990:CDS
AATGAATGTAGGACAGATAT+TGG 0.340082 2_2:-70471901 Msa0268990:CDS
TTGAATAATCGGTCTCAATT+CGG 0.341142 2_2:+70469633 None:intergenic
GTCGTTAGAAATCAAGATAT+TGG 0.341954 2_2:-70467439 Msa0268990:CDS
ATATGGTCTTCAACCCATTA+GGG 0.343228 2_2:-70471935 Msa0268990:CDS
AAAGGGGTTCGAATAAATAT+TGG 0.343905 2_2:+70467376 None:intergenic
CTGGGATCTTGGGTAGAAAC+AGG 0.344385 2_2:-70472297 Msa0268990:CDS
GGAAAACGAGTTGATTATTC+GGG 0.350240 2_2:-70469337 Msa0268990:CDS
AGACCGATTATTCAAATAGA+TGG 0.352617 2_2:-70469625 Msa0268990:CDS
ACTGCTACATCTATTTCATT+AGG 0.354727 2_2:-70468069 Msa0268990:CDS
TGGAAAACGAGTTGATTATT+CGG 0.358566 2_2:-70469338 Msa0268990:CDS
ATCTTGAGTTGGTACGGAAA+TGG 0.362284 2_2:+70468874 None:intergenic
TGAATAATCGGTCTCAATTC+GGG 0.364643 2_2:+70469634 None:intergenic
ATTATATGGACTGGATTAAA+GGG 0.370361 2_2:+70467850 None:intergenic
TCCGCTCTTTCCCGGATACT+CGG 0.379405 2_2:+70471726 None:intergenic
TGGACTAGCCATCCTTTAGA+AGG 0.382153 2_2:+70468024 None:intergenic
TTCCGCTAGTTAATACATAA+AGG 0.382446 2_2:+70468840 None:intergenic
TTGAATCCCTTACACACTAA+TGG 0.385461 2_2:+70469016 None:intergenic
GAATGTTCACTCGGATTAGC+TGG 0.386652 2_2:-70471879 Msa0268990:CDS
GTGGATACACTCCTTGATAA+TGG 0.387696 2_2:-70469460 Msa0268990:CDS
GATATTTGAACCCGAGTATC+CGG 0.389575 2_2:-70471737 Msa0268990:CDS
ATTTCTGTAAATACCCGAAA+TGG 0.389944 2_2:-70467544 Msa0268990:CDS
TTTCAGACATTTCTAATTCG+TGG 0.395006 2_2:-70469238 Msa0268990:CDS
GATATGGTCTTCAACCCATT+AGG 0.395616 2_2:-70471936 Msa0268990:CDS
GTTGGCGGTGAACTCGCTTT+GGG 0.396452 2_2:-70472542 Msa0268990:CDS
AGATGGAAGACCCGTTGATA+TGG 0.398344 2_2:-70471952 Msa0268990:CDS
ACGAGAACAATTAGTTGATC+TGG 0.400881 2_2:-70469863 Msa0268990:CDS
GGCGCTCTATTCAGCAATAC+TGG 0.401200 2_2:+70469109 None:intergenic
AGTATCCACAACCCCTTTAC+GGG 0.401249 2_2:+70467666 None:intergenic
AGACATAAAACCATCCATTC+TGG 0.402557 2_2:+70469673 None:intergenic
TGGATTCTTCGTTGGTAGAA+TGG 0.407733 2_2:-70469825 Msa0268990:CDS
GGATTCAATGCAGACTTTGA+TGG 0.407959 2_2:-70469001 Msa0268990:CDS
TCATGTGCCTTTATCTTTGG+AGG 0.409231 2_2:-70468963 Msa0268990:CDS
AGATTATTACGAGCTATACT+TGG 0.409704 2_2:-70472210 Msa0268990:CDS
CTTGCTACGGAGCCCGTAAA+GGG 0.410011 2_2:-70467678 Msa0268990:CDS
AGCAGATTAATAGACCATTT+CGG 0.411046 2_2:-70468150 Msa0268990:CDS
GCTTGAGCCTCCAAAGATAA+AGG 0.413525 2_2:+70468956 None:intergenic
GACGTATTCCTACAGGTAAA+GGG 0.421613 2_2:+70467359 None:intergenic
GATTCAATGCAGACTTTGAT+GGG 0.425961 2_2:-70469000 Msa0268990:CDS
TCTTGAGTTGGTACGGAAAT+GGG 0.426083 2_2:+70468875 None:intergenic
GAATTGTGATTCTGGGATCT+TGG 0.426630 2_2:-70472308 Msa0268990:CDS
CTCAATTCGGGAGGAAGAAC+TGG 0.430438 2_2:+70469646 None:intergenic
TCTCGTAAATTGCTTTGAAT+GGG 0.433790 2_2:+70467730 None:intergenic
TTCGTGAGGGTACCCCTAAT+GGG 0.434009 2_2:+70471922 None:intergenic
ATTCTGGTTCTATATTTGTT+CGG 0.435196 2_2:+70469689 None:intergenic
ATTATAACAGGCTGTTCAAA+AGG 0.436541 2_2:+70471679 None:intergenic
TTATTATGACCGTCCCTCAT+TGG 0.440271 2_2:+70469424 None:intergenic
TCTACCAGGTCCCCATGAAT+AGG 0.440638 2_2:+70467305 None:intergenic
GAGGATTCTTTCGCCATTTG+AGG 0.441108 2_2:+70472249 None:intergenic
CATACCATATTTCAATGGAT+TGG 0.443039 2_2:+70467926 None:intergenic
CAGATTGCGGTACGATTCGC+GGG 0.446348 2_2:-70467567 Msa0268990:CDS
TTTGCATAGATTGGGCATAC+AGG 0.446557 2_2:-70469083 Msa0268990:CDS
TGTAGCATACCATATTTCAA+TGG 0.450731 2_2:+70467921 None:intergenic
CAAAATGGAATTGTGATTCT+GGG 0.451553 2_2:-70472315 Msa0268990:CDS
CTGGATCAAGTAAAGACTCT+AGG 0.462436 2_2:-70468105 Msa0268990:CDS
GCTCGTAATAATCTATCTTC+CGG 0.462719 2_2:+70472219 None:intergenic
CACTGACAATGAAAATGAAT+GGG 0.463118 2_2:-70469779 Msa0268990:CDS
CTAGAGTCTTTACTTGATCC+AGG 0.463607 2_2:+70468106 None:intergenic
CCACTGACAATGAAAATGAA+TGG 0.464389 2_2:-70469780 Msa0268990:CDS
AGACGTATTCCTACAGGTAA+AGG 0.465006 2_2:+70467358 None:intergenic
TGGAAAGAATTAGGAGAAGA+GGG 0.467304 2_2:-70469805 Msa0268990:CDS
GGGTAAATTAACGCCTCAAA+TGG 0.467677 2_2:-70472262 Msa0268990:CDS
GGAAAGAGCGGAATATTTGA+TGG 0.469164 2_2:-70471715 Msa0268990:CDS
TGTCTAATTTCGGAGTAAAT+GGG 0.471192 2_2:+70472336 None:intergenic
GTAGCAGACGATATATATAT+CGG 0.471989 2_2:-70467475 Msa0268990:CDS
GCGCCTACTTTGCATAGATT+GGG 0.476543 2_2:-70469091 Msa0268990:CDS
TGAAGTATTTCCCATACAAT+CGG 0.477354 2_2:+70469151 None:intergenic
CCGCTCTTTCCCGGATACTC+GGG 0.478316 2_2:+70471727 None:intergenic
CCTCTTGTCTCCGGCTATTG+GGG 0.480180 2_2:-70468900 Msa0268990:CDS
GGGCGTTCTGTTATTGTCGT+AGG 0.483193 2_2:-70469316 Msa0268990:CDS
AATTGTGATTCTGGGATCTT+GGG 0.486220 2_2:-70472307 Msa0268990:CDS
AGAGAAATTTCTAGTGGAGC+AGG 0.488408 2_2:-70469892 Msa0268990:CDS
GTCTTTCACAATAACGTGAT+AGG 0.489141 2_2:-70468198 Msa0268990:CDS
GTTATTGTGAAAGACTAGAT+TGG 0.489846 2_2:+70468206 None:intergenic
TCTTGCTACGGAGCCCGTAA+AGG 0.490200 2_2:-70467679 Msa0268990:CDS
TGGAGGGAAACTAATGAGTT+CGG 0.494350 2_2:-70469605 Msa0268990:CDS
GGCATATACATCACACATCC+TGG 0.495134 2_2:-70468124 Msa0268990:CDS
TAACAATACCTTCTAAAGGA+TGG 0.495965 2_2:-70468032 Msa0268990:CDS
CGAAATAGAGAAATTTCTAG+TGG 0.496839 2_2:-70469898 Msa0268990:CDS
TAGCTCTATTGCTATTTCGC+GGG 0.496998 2_2:+70469261 None:intergenic
AATTATTATGGATTCTTCGT+TGG 0.499116 2_2:-70469833 Msa0268990:CDS
CAAGTTGATGATAAAATACA+TGG 0.502523 2_2:-70471625 Msa0268990:CDS
TCATACAAACCTCTTGTCTC+CGG 0.506883 2_2:-70468909 Msa0268990:CDS
ATGGGCGGAGTCCTATTCAT+GGG 0.508984 2_2:-70467316 Msa0268990:CDS
GAATGGGAAGATCGAAAAGT+AGG 0.511851 2_2:-70469763 Msa0268990:CDS
GACTCCGCCCATAACACAAT+CGG 0.512450 2_2:+70467327 None:intergenic
TGTACTCATTAGTGAACGTC+TGG 0.512500 2_2:-70472465 Msa0268990:intron
CGGAGCCCGTAAAGGGGTTG+TGG 0.513039 2_2:-70467671 Msa0268990:CDS
AAATCAATCATTTGTCCTTG+TGG 0.513235 2_2:+70467754 None:intergenic
ATGGAAAGAATTAGGAGAAG+AGG 0.513927 2_2:-70469806 Msa0268990:CDS
ATAGCTCTATTGCTATTTCG+CGG 0.516257 2_2:+70469260 None:intergenic
TAGATGTAGCAGTAGCTTGA+CGG 0.516966 2_2:+70468079 None:intergenic
TATGGGCGGAGTCCTATTCA+TGG 0.517790 2_2:-70467317 Msa0268990:CDS
GATATGCCTTATTTGCAAGA+TGG 0.518600 2_2:-70471969 Msa0268990:CDS
TATTAGTAGCTTATATGCCA+TGG 0.519177 2_2:-70472511 Msa0268990:CDS
GTAAACAAACATCGAATCCA+TGG 0.519391 2_2:-70471759 Msa0268990:CDS
GAGTTGCTAAGAGTAAAATA+CGG 0.520079 2_2:-70469183 Msa0268990:CDS
TTGTTTCGCCCTTCTTTAAG+GGG 0.520107 2_2:+70471565 None:intergenic
ACACAACAACCCCTTAAAGA+AGG 0.522817 2_2:-70471574 Msa0268990:CDS
AGATTTCGAGAGACTCTGCT+TGG 0.523467 2_2:-70469358 Msa0268990:CDS
ATGTATATGCCATTCCGAAA+TGG 0.525535 2_2:+70468136 None:intergenic
AGACTTTGATGGGGATCAAA+TGG 0.531054 2_2:-70468990 Msa0268990:CDS
ACAGATTGCGGTACGATTCG+CGG 0.531220 2_2:-70467568 Msa0268990:CDS
GCAGATGGTGCTGCTACTGT+TGG 0.531919 2_2:-70472560 Msa0268990:CDS
GTCCGCGGATTCCATTATCA+AGG 0.532137 2_2:+70469449 None:intergenic
CCTATAAGCATATCTTGAGT+TGG 0.532621 2_2:+70468863 None:intergenic
GAATATATAATTTCTTGCTA+CGG 0.534554 2_2:-70467691 Msa0268990:CDS
GGGTTGAAGACCATATCAAC+GGG 0.535156 2_2:+70471942 None:intergenic
CAGCTTCTCCCAATTCTACC+AGG 0.535523 2_2:+70467291 None:intergenic
GATATAATTGAGGGCAAAGA+GGG 0.535939 2_2:-70469382 Msa0268990:CDS
TGGATCAAGTAAAGACTCTA+GGG 0.538268 2_2:-70468104 Msa0268990:CDS
AATACTTCAAGAAGTTATGC+GGG 0.538847 2_2:-70469137 Msa0268990:CDS
TAATCTATCTTCCGGAGCAT+AGG 0.540322 2_2:+70472227 None:intergenic
TCTATCTTCCGGAGCATAGG+AGG 0.540370 2_2:+70472230 None:intergenic
AAGCATATCTTGAGTTGGTA+CGG 0.543078 2_2:+70468868 None:intergenic
GATCCAAGACGTATTCCTAC+AGG 0.544747 2_2:+70467352 None:intergenic
TACTCGGGTTCAAATATCCA+TGG 0.546454 2_2:+70471742 None:intergenic
TTACCTGTAGGAATACGTCT+TGG 0.547868 2_2:-70467355 Msa0268990:CDS
TGACACATTACTAATTCCCC+TGG 0.549045 2_2:+70469505 None:intergenic
GAACAAATATAGAACCAGAA+TGG 0.550621 2_2:-70469687 Msa0268990:CDS
CAGATATTGGAATGTTCACT+CGG 0.551609 2_2:-70471888 Msa0268990:CDS
GATGGTGCTGCTACTGTTGG+CGG 0.553778 2_2:-70472557 Msa0268990:CDS
ATTCGAACCCCTTTACCTGT+AGG 0.555112 2_2:-70467367 Msa0268990:CDS
GATTATTACGAGCTATACTT+GGG 0.558504 2_2:-70472209 Msa0268990:CDS
AGTTGCTAAGAGTAAAATAC+GGG 0.563519 2_2:-70469182 Msa0268990:CDS
TTACATCCATTAGTGTGTAA+GGG 0.565613 2_2:-70469022 Msa0268990:CDS
AACAAGTGCATAATGTCCAC+TGG 0.566338 2_2:+70471597 None:intergenic
AAATATAGAACCAGAATGGA+TGG 0.566690 2_2:-70469683 Msa0268990:CDS
AATGTTCACTCGGATTAGCT+GGG 0.569063 2_2:-70471878 Msa0268990:CDS
GAAAGAATCCTCCTATGCTC+CGG 0.570879 2_2:-70472238 Msa0268990:CDS
TCTATAGAAGAGTTATCTAT+CGG 0.571448 2_2:-70469570 Msa0268990:CDS
GCTGTACGAACATCAGATGC+TGG 0.573261 2_2:-70467643 Msa0268990:CDS
TACACGTCGACTTGTTGAAG+TGG 0.573503 2_2:-70467614 Msa0268990:CDS
CCGATTATTCAAATAGATGG+AGG 0.576436 2_2:-70469622 Msa0268990:CDS
ATGCCCAATCTATGCAAAGT+AGG 0.578492 2_2:+70469088 None:intergenic
CACCAATTAGTCGGAATGAG+AGG 0.580106 2_2:-70467790 Msa0268990:CDS
ATATTTGAACCCGAGTATCC+GGG 0.581389 2_2:-70471736 Msa0268990:CDS
GAGTCCTATTCATGGGGACC+TGG 0.582108 2_2:-70467309 Msa0268990:CDS
CTGTCCTACATTCATTCGTG+AGG 0.583153 2_2:+70471908 None:intergenic
CCCGAGTATCCGGGAAAGAG+CGG 0.584519 2_2:-70471727 Msa0268990:CDS
TCACTTTCATTACATCGATG+TGG 0.585158 2_2:-70469289 Msa0268990:CDS
CCTTAAAGAAGGGCGAAACA+AGG 0.585734 2_2:-70471563 Msa0268990:CDS
ATTAATAGACCATTTCGGAA+TGG 0.587547 2_2:-70468145 Msa0268990:CDS
GAAATGGGATCCCCAATAGC+CGG 0.587924 2_2:+70468890 None:intergenic
CACAACAACCCCTTAAAGAA+GGG 0.589217 2_2:-70471573 Msa0268990:CDS
ACGATATATATATCGGTTCA+CGG 0.590851 2_2:-70467468 Msa0268990:CDS
TGGGATCTTGGGTAGAAACA+GGG 0.592045 2_2:-70472296 Msa0268990:CDS
TCAGAATTGTAACCTTCCCA+TGG 0.596416 2_2:+70472494 None:intergenic
ATTAGTAGCTTATATGCCAT+GGG 0.596673 2_2:-70472510 Msa0268990:CDS
GGCCTTTATGTATTAACTAG+CGG 0.596927 2_2:-70468842 Msa0268990:CDS
AAAATTGGTACAAGAAGCCG+TGG 0.599616 2_2:-70469479 Msa0268990:CDS
AGCTCTATTGCTATTTCGCG+GGG 0.600779 2_2:+70469262 None:intergenic
ATTCAAAGCAATTTACGAGA+AGG 0.601229 2_2:-70467727 Msa0268990:CDS
CTCCTTGATAATGGAATCCG+CGG 0.604913 2_2:-70469451 Msa0268990:CDS
AGATATAATTGAGGGCAAAG+AGG 0.606620 2_2:-70469383 Msa0268990:CDS
CATCGATGTAATGAAAGTGA+TGG 0.607503 2_2:+70469292 None:intergenic
GTAGCTTATATGCCATGGGA+AGG 0.611195 2_2:-70472506 Msa0268990:CDS
TGTCCTACATTCATTCGTGA+GGG 0.611498 2_2:+70471909 None:intergenic
AAAATACATGGACGTTCCAG+TGG 0.614997 2_2:-70471613 Msa0268990:CDS
TCTCAAGTGCACCAATTAGT+CGG 0.615181 2_2:-70467799 Msa0268990:CDS
CCCCAATAGCCGGAGACAAG+AGG 0.615798 2_2:+70468900 None:intergenic
ATTATCAAGGAGTGTATCCA+CGG 0.619206 2_2:+70469462 None:intergenic
AATCCGCGGACAACCAATGA+GGG 0.620928 2_2:-70469437 Msa0268990:CDS
GTACCCTCACGAATGAATGT+AGG 0.622385 2_2:-70471912 Msa0268990:CDS
TGGGTTGAAGACCATATCAA+CGG 0.622611 2_2:+70471941 None:intergenic
CGTCCCTCATTGGTTGTCCG+CGG 0.625858 2_2:+70469434 None:intergenic
GGGATCTTGGGTAGAAACAG+GGG 0.635116 2_2:-70472295 Msa0268990:CDS
TTGCTACGGAGCCCGTAAAG+GGG 0.638134 2_2:-70467677 Msa0268990:CDS
AAATACTTCAAGAAGTTATG+CGG 0.639489 2_2:-70469138 Msa0268990:CDS
CGATTATTCAAATAGATGGA+GGG 0.639639 2_2:-70469621 Msa0268990:CDS
TTTCACAATAACGTGATAGG+TGG 0.645396 2_2:-70468195 Msa0268990:CDS
ACGTATTCCTACAGGTAAAG+GGG 0.650020 2_2:+70467360 None:intergenic
CGCGGACAACCAATGAGGGA+CGG 0.650205 2_2:-70469433 Msa0268990:CDS
GTTGTACGTCGAACAGATTG+CGG 0.659130 2_2:-70467580 Msa0268990:CDS
ACAACAAGTAGATCTACACC+AGG 0.661649 2_2:-70469523 Msa0268990:CDS
ATTCAATGCAGACTTTGATG+GGG 0.662689 2_2:-70468999 Msa0268990:CDS
GAAAACGAGTTGATTATTCG+GGG 0.664266 2_2:-70469336 Msa0268990:CDS
TGGGCGGAGTCCTATTCATG+GGG 0.665077 2_2:-70467315 Msa0268990:CDS
GAATCCGCGGACAACCAATG+AGG 0.667535 2_2:-70469438 Msa0268990:CDS
TACTTCAAGAAGTTATGCGG+GGG 0.669171 2_2:-70469135 Msa0268990:CDS
TATGGTCTTCAACCCATTAG+GGG 0.670295 2_2:-70471934 Msa0268990:CDS
TTATATGGACTGGATTAAAG+GGG 0.684921 2_2:+70467851 None:intergenic
ATACTTCAAGAAGTTATGCG+GGG 0.687954 2_2:-70469136 Msa0268990:CDS
GAATATTTGATGGAAGAACA+GGG 0.689025 2_2:-70471705 Msa0268990:CDS
TCAGTATGGGAATGTACATG+CGG 0.691247 2_2:-70467962 Msa0268990:CDS
GGGCGAAACAAGGAGGACAA+CGG 0.694929 2_2:-70471553 Msa0268990:intron
CAACAAGTAGATCTACACCA+GGG 0.701288 2_2:-70469522 Msa0268990:CDS
TAAAGAAGGGCGAAACAAGG+AGG 0.702247 2_2:-70471560 Msa0268990:CDS
AACAAGTAGATCTACACCAG+GGG 0.706918 2_2:-70469521 Msa0268990:CDS
GGATTAATGTCAGATCCACA+AGG 0.711466 2_2:-70467769 Msa0268990:CDS
ATAATCGGTCTCAATTCGGG+AGG 0.712530 2_2:+70469637 None:intergenic
TTAACTAGCGGAAATCGTCG+AGG 0.734048 2_2:-70468830 Msa0268990:intron
TCTGCCGATTGTGTTATGGG+CGG 0.746299 2_2:-70467331 Msa0268990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATTTTTAATAAAAAA+AGG + chr2_2:70469531-70469550 None:intergenic 0.0%
!!! TAATTTTTTTTTTTTTCACA+AGG + chr2_2:70469292-70469311 None:intergenic 10.0%
!! TGAATTAATTTCAAGATATA+AGG + chr2_2:70468244-70468263 None:intergenic 15.0%
!!! CTCTAAATCTAAAATAAAAA+AGG + chr2_2:70469711-70469730 None:intergenic 15.0%
!!! CTTTTTTATTTTAGATTTAG+AGG - chr2_2:70469709-70469728 Msa0268990:CDS 15.0%
!!! ATTTTGATACAAACATTAAT+TGG - chr2_2:70472385-70472404 Msa0268990:intron 15.0%
!!! ATTTTATTAGTGATTCTTTC+AGG + chr2_2:70467520-70467539 None:intergenic 20.0%
!!! AATTCCATTTTGTCTAATTT+CGG + chr2_2:70467567-70467586 None:intergenic 20.0%
!! AATATATATATGAATCGTTC+TGG + chr2_2:70467815-70467834 None:intergenic 20.0%
!!! TTATTTTGTGAACGAATTTT+TGG - chr2_2:70468805-70468824 Msa0268990:intron 20.0%
!!! TATTTTGTGAACGAATTTTT+GGG - chr2_2:70468806-70468825 Msa0268990:intron 20.0%
!!! TGATACATTATTCTTTGTTT+CGG + chr2_2:70469642-70469661 None:intergenic 20.0%
!!! GGTTTTCAAAAATTTGAAAA+CGG - chr2_2:70469730-70469749 Msa0268990:CDS 20.0%
!! ACACAATAAAGATAAAGAAA+GGG + chr2_2:70469760-70469779 None:intergenic 20.0%
!! TCTGGATTTAAGAATTATTA+TGG - chr2_2:70470045-70470064 Msa0268990:intron 20.0%
!! TTAGAATTTCTGCAATTAAA+CGG + chr2_2:70471108-70471127 None:intergenic 20.0%
!! GTACCTATTATGAAATTTAT+GGG - chr2_2:70471325-70471344 Msa0268990:intron 20.0%
!! GTAAATTTATGTTATGATAC+TGG - chr2_2:70471518-70471537 Msa0268990:intron 20.0%
!!! AAGAAATGAATCCTAATTTT+AGG - chr2_2:70472008-70472027 Msa0268990:intron 20.0%
!! GAATATATAATTTCTTGCTA+CGG - chr2_2:70472199-70472218 Msa0268990:intron 20.0%
! AATTAAAGTAGGTGATAAAG+TGG - chr2_2:70467849-70467868 Msa0268990:CDS 25.0%
!! TAAGGTTTTCCTATTATAAC+AGG + chr2_2:70468226-70468245 None:intergenic 25.0%
!!! CAAGTTGATGATAAAATACA+TGG - chr2_2:70468265-70468284 Msa0268990:intron 25.0%
!!! GTTTTGTAATGAAGAGTATA+GGG + chr2_2:70468763-70468782 None:intergenic 25.0%
!! CAAAATAATCCATCTTTTTC+AGG + chr2_2:70468793-70468812 None:intergenic 25.0%
!!! GAGTAGAATTTATTGATTCT+CGG - chr2_2:70468914-70468933 Msa0268990:CDS 25.0%
!!! AGTAGAATTTATTGATTCTC+GGG - chr2_2:70468915-70468934 Msa0268990:CDS 25.0%
! AAACCTCTTAAAGAATTAGA+AGG - chr2_2:70469036-70469055 Msa0268990:CDS 25.0%
! GTCATTCCATTCAATTAAAT+TGG - chr2_2:70469123-70469142 Msa0268990:CDS 25.0%
! GACATTCCAATTTAATTGAA+TGG + chr2_2:70469132-70469151 None:intergenic 25.0%
!! TCATACCATATTGATCTTTT+AGG + chr2_2:70469469-70469488 None:intergenic 25.0%
! CACAATAAAGATAAAGAAAG+GGG + chr2_2:70469759-70469778 None:intergenic 25.0%
! CACACAATAAAGATAAAGAA+AGG + chr2_2:70469761-70469780 None:intergenic 25.0%
!!! AAAGTAGGTTTTTTAACTAC+GGG + chr2_2:70469881-70469900 None:intergenic 25.0%
!!! GAAAGTAGGTTTTTTAACTA+CGG + chr2_2:70469882-70469901 None:intergenic 25.0%
! AATTATTATGGATTCTTCGT+TGG - chr2_2:70470057-70470076 Msa0268990:intron 25.0%
!!! AGGAAGAAGAAAGAATTTTT+TGG - chr2_2:70470147-70470166 Msa0268990:intron 25.0%
!!! ATTCTGGTTCTATATTTGTT+CGG + chr2_2:70470204-70470223 None:intergenic 25.0%
! TCTATAGAAGAGTTATCTAT+CGG - chr2_2:70470320-70470339 Msa0268990:intron 25.0%
!!! TAGATCTACTTGTTGTTAAT+AGG + chr2_2:70470363-70470382 None:intergenic 25.0%
! AGTAATGTGTCAAGAAAAAT+TGG - chr2_2:70470396-70470415 Msa0268990:intron 25.0%
!! ATCGTTTTCAGATATAATTG+AGG - chr2_2:70470498-70470517 Msa0268990:intron 25.0%
!! TCGTTTTCAGATATAATTGA+GGG - chr2_2:70470499-70470518 Msa0268990:intron 25.0%
! AAATACTTCAAGAAGTTATG+CGG - chr2_2:70470752-70470771 Msa0268990:intron 25.0%
!!! TTTCAACCTATTTTAGTAGA+AGG - chr2_2:70470832-70470851 Msa0268990:intron 25.0%
! TCATAGGAATTGCAAAAAAA+GGG + chr2_2:70471180-70471199 None:intergenic 25.0%
! ATCATAGGAATTGCAAAAAA+AGG + chr2_2:70471181-70471200 None:intergenic 25.0%
!! TAAATTTCGATAGTCCTTTT+TGG - chr2_2:70471229-70471248 Msa0268990:intron 25.0%
! GGTACCTATTATGAAATTTA+TGG - chr2_2:70471324-70471343 Msa0268990:intron 25.0%
! ATGCCCATAAATTTCATAAT+AGG + chr2_2:70471331-70471350 None:intergenic 25.0%
! TGATTAGATACCATATGAAT+AGG + chr2_2:70471468-70471487 None:intergenic 25.0%
! ATGGTATCTAATCATATAGA+TGG - chr2_2:70471474-70471493 Msa0268990:intron 25.0%
! ATAACATAAATTTACCTAGC+TGG + chr2_2:70471513-70471532 None:intergenic 25.0%
! CGTGAATAAACATAAAGAAA+AGG - chr2_2:70471579-70471598 Msa0268990:CDS 25.0%
! AATGAATTTGAGTCAATGAT+TGG + chr2_2:70471612-70471631 None:intergenic 25.0%
!! CTTTTAACAATACCTTCTAA+AGG - chr2_2:70471854-70471873 Msa0268990:intron 25.0%
!! TGAACAACAAAGTTCTATTT+TGG - chr2_2:70471895-70471914 Msa0268990:CDS 25.0%
! TTGGAAAAACATAATCAGTA+TGG - chr2_2:70471914-70471933 Msa0268990:CDS 25.0%
! TGGAAAAACATAATCAGTAT+GGG - chr2_2:70471915-70471934 Msa0268990:CDS 25.0%
!!! ATTATATGGACTGGATTAAA+GGG + chr2_2:70472043-70472062 None:intergenic 25.0%
! GTTTGTATCAAAATTCTTTC+TGG + chr2_2:70472379-70472398 None:intergenic 25.0%
! AGAAATCAAGATATTGGAAT+TGG - chr2_2:70472457-70472476 Msa0268990:intron 25.0%
TATTAGTAGCTTATATGCCA+TGG - chr2_2:70467379-70467398 Msa0268990:CDS 30.0%
ATTAGTAGCTTATATGCCAT+GGG - chr2_2:70467380-70467399 Msa0268990:CDS 30.0%
TGTCTAATTTCGGAGTAAAT+GGG + chr2_2:70467557-70467576 None:intergenic 30.0%
TTGTCTAATTTCGGAGTAAA+TGG + chr2_2:70467558-70467577 None:intergenic 30.0%
TACTCCGAAATTAGACAAAA+TGG - chr2_2:70467560-70467579 Msa0268990:CDS 30.0%
ACAAAATGGAATTGTGATTC+TGG - chr2_2:70467574-70467593 Msa0268990:CDS 30.0%
CAAAATGGAATTGTGATTCT+GGG - chr2_2:70467575-70467594 Msa0268990:CDS 30.0%
AGATTATTACGAGCTATACT+TGG - chr2_2:70467680-70467699 Msa0268990:CDS 30.0%
GATTATTACGAGCTATACTT+GGG - chr2_2:70467681-70467700 Msa0268990:CDS 30.0%
! TTTTAGACAAGTTTCCTTTG+AGG + chr2_2:70467720-70467739 None:intergenic 30.0%
! ACTTGTCTAAAACTACCTAT+AGG - chr2_2:70467728-70467747 Msa0268990:CDS 30.0%
CAGAAACGTGAAATTAAAGT+AGG - chr2_2:70467838-70467857 Msa0268990:CDS 30.0%
! TTCAAAGATTTTGTCTAGAC+AGG - chr2_2:70467899-70467918 Msa0268990:CDS 30.0%
AATGAATGTAGGACAGATAT+TGG - chr2_2:70467989-70468008 Msa0268990:CDS 30.0%
TGTTCATATCTCTCATCAAA+AGG + chr2_2:70468067-70468086 None:intergenic 30.0%
! TTTTGATGAGAGATATGAAC+AGG - chr2_2:70468066-70468085 Msa0268990:CDS 30.0%
! TTCAGAAAACACAAGTTTTC+TGG + chr2_2:70468098-70468117 None:intergenic 30.0%
GAATATTTGATGGAAGAACA+GGG - chr2_2:70468185-70468204 Msa0268990:CDS 30.0%
ATTATAACAGGCTGTTCAAA+AGG + chr2_2:70468214-70468233 None:intergenic 30.0%
TTTGAACAGCCTGTTATAAT+AGG - chr2_2:70468214-70468233 Msa0268990:CDS 30.0%
TCAAAGGAAGGAAGTTTAAT+TGG - chr2_2:70468598-70468617 Msa0268990:intron 30.0%
GCAAAAAAAATCCTACCTAA+TGG - chr2_2:70468712-70468731 Msa0268990:intron 30.0%
!! GGTTTTGTAATGAAGAGTAT+AGG + chr2_2:70468764-70468783 None:intergenic 30.0%
!! ATTTTTGGGCCTATAAAAAG+TGG - chr2_2:70468820-70468839 Msa0268990:intron 30.0%
!! TTTTTGGGCCTATAAAAAGT+GGG - chr2_2:70468821-70468840 Msa0268990:intron 30.0%
TGTGGAAATTATCGAGTAAT+CGG - chr2_2:70468853-70468872 Msa0268990:CDS 30.0%
ATTGTTCACAAAATTTGGGT+TGG + chr2_2:70468891-70468910 None:intergenic 30.0%
AAAAGACTCGCAATATAACT+AGG + chr2_2:70469012-70469031 None:intergenic 30.0%
AGACCTTCTAATTCTTTAAG+AGG + chr2_2:70469042-70469061 None:intergenic 30.0%
TGAATACTCCCAAATCAATA+AGG - chr2_2:70469210-70469229 Msa0268990:CDS 30.0%
GAATACTCCCAAATCAATAA+GGG - chr2_2:70469211-70469230 Msa0268990:CDS 30.0%
!! ACCAATTCCCTTATTGATTT+GGG + chr2_2:70469221-70469240 None:intergenic 30.0%
TATATGCGATAGATAGACTT+CGG + chr2_2:70469403-70469422 None:intergenic 30.0%
CTTGACCTAAAAGATCAATA+TGG - chr2_2:70469461-70469480 Msa0268990:CDS 30.0%
AGAAATCTCTTATGAATTCG+AGG - chr2_2:70469500-70469519 Msa0268990:CDS 30.0%
TTGTGTGTAAATACTTTAGC+CGG - chr2_2:70469774-70469793 Msa0268990:CDS 30.0%
AGCAAACGAAAAATTTGGAT+AGG + chr2_2:70469855-70469874 None:intergenic 30.0%
! ATCCAAATTTTTCGTTTGCT+AGG - chr2_2:70469855-70469874 Msa0268990:CDS 30.0%
TCGAATATGAAATCCAATCT+TGG - chr2_2:70469921-70469940 Msa0268990:intron 30.0%
! CGAAATAGAGAAATTTCTAG+TGG - chr2_2:70469992-70470011 Msa0268990:intron 30.0%
TTGGTAGAATGGAAAGAATT+AGG - chr2_2:70470076-70470095 Msa0268990:intron 30.0%
CACTGACAATGAAAATGAAT+GGG - chr2_2:70470111-70470130 Msa0268990:intron 30.0%
GAACAAATATAGAACCAGAA+TGG - chr2_2:70470203-70470222 Msa0268990:intron 30.0%
AAATATAGAACCAGAATGGA+TGG - chr2_2:70470207-70470226 Msa0268990:intron 30.0%
TTGAATAATCGGTCTCAATT+CGG + chr2_2:70470260-70470279 None:intergenic 30.0%
AGACCGATTATTCAAATAGA+TGG - chr2_2:70470265-70470284 Msa0268990:intron 30.0%
CCTCCATCTATTTGAATAAT+CGG + chr2_2:70470271-70470290 None:intergenic 30.0%
CGATTATTCAAATAGATGGA+GGG - chr2_2:70470269-70470288 Msa0268990:intron 30.0%
!! TGGAAAACGAGTTGATTATT+CGG - chr2_2:70470552-70470571 Msa0268990:intron 30.0%
TTTCAGACATTTCTAATTCG+TGG - chr2_2:70470652-70470671 Msa0268990:intron 30.0%
! AAACATTTTGCTTCGAACAT+AGG - chr2_2:70470685-70470704 Msa0268990:intron 30.0%
GAGTTGCTAAGAGTAAAATA+CGG - chr2_2:70470707-70470726 Msa0268990:intron 30.0%
AGTTGCTAAGAGTAAAATAC+GGG - chr2_2:70470708-70470727 Msa0268990:intron 30.0%
! TGAAGTATTTCCCATACAAT+CGG + chr2_2:70470742-70470761 None:intergenic 30.0%
AATACTTCAAGAAGTTATGC+GGG - chr2_2:70470753-70470772 Msa0268990:intron 30.0%
TTTACATCCATTAGTGTGTA+AGG - chr2_2:70470867-70470886 Msa0268990:intron 30.0%
TTACATCCATTAGTGTGTAA+GGG - chr2_2:70470868-70470887 Msa0268990:intron 30.0%
TTCCGCTAGTTAATACATAA+AGG + chr2_2:70471053-70471072 None:intergenic 30.0%
! GAAGTTCACTATGAATCTTT+TGG - chr2_2:70471303-70471322 Msa0268990:intron 30.0%
ATATACATTAGAACCACTGT+TGG - chr2_2:70471389-70471408 Msa0268990:intron 30.0%
AAAAGAAATATGACCAACAG+TGG + chr2_2:70471405-70471424 None:intergenic 30.0%
GAAATTGAAGAAGCTATACA+AGG - chr2_2:70471431-70471450 Msa0268990:intron 30.0%
GTTATTGTGAAAGACTAGAT+TGG + chr2_2:70471687-70471706 None:intergenic 30.0%
TCTGCTAATAAGTCGTTTAA+TGG + chr2_2:70471726-70471745 None:intergenic 30.0%
AGCAGATTAATAGACCATTT+CGG - chr2_2:70471740-70471759 Msa0268990:CDS 30.0%
ATTAATAGACCATTTCGGAA+TGG - chr2_2:70471745-70471764 Msa0268990:CDS 30.0%
ACTGCTACATCTATTTCATT+AGG - chr2_2:70471821-70471840 Msa0268990:intron 30.0%
! TAACAATACCTTCTAAAGGA+TGG - chr2_2:70471858-70471877 Msa0268990:intron 30.0%
CATACCATATTTCAATGGAT+TGG + chr2_2:70471967-70471986 None:intergenic 30.0%
TGTAGCATACCATATTTCAA+TGG + chr2_2:70471972-70471991 None:intergenic 30.0%
!! TTATATGGACTGGATTAAAG+GGG + chr2_2:70472042-70472061 None:intergenic 30.0%
!! CATTATATGGACTGGATTAA+AGG + chr2_2:70472044-70472063 None:intergenic 30.0%
GAAAAAGACATTATATGGAC+TGG + chr2_2:70472052-70472071 None:intergenic 30.0%
! GTCCATATAATGTCTTTTTC+AGG - chr2_2:70472052-70472071 Msa0268990:intron 30.0%
CTCCTGAAAAAGACATTATA+TGG + chr2_2:70472057-70472076 None:intergenic 30.0%
AAATCAATCATTTGTCCTTG+TGG + chr2_2:70472139-70472158 None:intergenic 30.0%
! TCTCGTAAATTGCTTTGAAT+GGG + chr2_2:70472163-70472182 None:intergenic 30.0%
! TTCTCGTAAATTGCTTTGAA+TGG + chr2_2:70472164-70472183 None:intergenic 30.0%
ATTCAAAGCAATTTACGAGA+AGG - chr2_2:70472163-70472182 Msa0268990:intron 30.0%
ATTTCTGTAAATACCCGAAA+TGG - chr2_2:70472346-70472365 Msa0268990:intron 30.0%
! TTTCTGGTATCATTCCATTT+CGG + chr2_2:70472363-70472382 None:intergenic 30.0%
GTAGCAGACGATATATATAT+CGG - chr2_2:70472415-70472434 Msa0268990:intron 30.0%
!! ACGATATATATATCGGTTCA+CGG - chr2_2:70472422-70472441 Msa0268990:intron 30.0%
GTCGTTAGAAATCAAGATAT+TGG - chr2_2:70472451-70472470 Msa0268990:intron 30.0%
AAAGGGGTTCGAATAAATAT+TGG + chr2_2:70472517-70472536 None:intergenic 30.0%
!! AAGGGACAAATTTTAGCAGA+TGG - chr2_2:70467315-70467334 Msa0268990:CDS 35.0%
!! AATTGTGATTCTGGGATCTT+GGG - chr2_2:70467583-70467602 Msa0268990:CDS 35.0%
!! AGAAACAGGGGATATTTTAG+TGG - chr2_2:70467607-70467626 Msa0268990:CDS 35.0%
!!! GAAACAGGGGATATTTTAGT+GGG - chr2_2:70467608-70467627 Msa0268990:CDS 35.0%
GCTCGTAATAATCTATCTTC+CGG + chr2_2:70467674-70467693 None:intergenic 35.0%
! TGTCTAAAACTACCTATAGG+TGG - chr2_2:70467731-70467750 Msa0268990:CDS 35.0%
TAAAACTACCTATAGGTGGT+AGG - chr2_2:70467735-70467754 Msa0268990:CDS 35.0%
AAAACTACCTATAGGTGGTA+GGG - chr2_2:70467736-70467755 Msa0268990:CDS 35.0%
TCCATCTCACATCAATAACT+CGG + chr2_2:70467763-70467782 None:intergenic 35.0%
AGATGGATCCAAAAAAAAGC+AGG - chr2_2:70467776-70467795 Msa0268990:CDS 35.0%
!!! AGCTAGAACCTGCTTTTTTT+TGG + chr2_2:70467787-70467806 None:intergenic 35.0%
! TACCTTTATTTCATGTCTCC+CGG + chr2_2:70467875-70467894 None:intergenic 35.0%
!! GATATGCCTTATTTGCAAGA+TGG - chr2_2:70467921-70467940 Msa0268990:CDS 35.0%
ATATGGTCTTCAACCCATTA+GGG - chr2_2:70467955-70467974 Msa0268990:CDS 35.0%
CAGATATTGGAATGTTCACT+CGG - chr2_2:70468002-70468021 Msa0268990:CDS 35.0%
TGGATTCGATGTTTGTTTAC+TGG + chr2_2:70468131-70468150 None:intergenic 35.0%
GTAAACAAACATCGAATCCA+TGG - chr2_2:70468131-70468150 Msa0268990:CDS 35.0%
GGAATATTTGATGGAAGAAC+AGG - chr2_2:70468184-70468203 Msa0268990:CDS 35.0%
AAACTTCCTTCCTTTGAATC+TGG + chr2_2:70468595-70468614 None:intergenic 35.0%
AAACATCAACACCTTCGAAT+TGG - chr2_2:70468658-70468677 Msa0268990:intron 35.0%
TCCTGAACAAATAAGTGCTT+GGG - chr2_2:70468690-70468709 Msa0268990:intron 35.0%
CAACAATTTCTCCATTAGGT+AGG + chr2_2:70468726-70468745 None:intergenic 35.0%
CTACCTAATGGAGAAATTGT+TGG - chr2_2:70468724-70468743 Msa0268990:intron 35.0%
TCTCCAACAATTTCTCCATT+AGG + chr2_2:70468730-70468749 None:intergenic 35.0%
TAATGGAGAAATTGTTGGAG+AGG - chr2_2:70468729-70468748 Msa0268990:intron 35.0%
ACCAATAAGCCTGAAAAAGA+TGG - chr2_2:70468781-70468800 Msa0268990:intron 35.0%
!!! TCCATCTTTTTCAGGCTTAT+TGG + chr2_2:70468785-70468804 None:intergenic 35.0%
!!! GCACAAATCCCACTTTTTAT+AGG + chr2_2:70468832-70468851 None:intergenic 35.0%
CCGCATTGTTCACAAAATTT+GGG + chr2_2:70468895-70468914 None:intergenic 35.0%
! CCCAAATTTTGTGAACAATG+CGG - chr2_2:70468892-70468911 Msa0268990:CDS 35.0%
TCCGCATTGTTCACAAAATT+TGG + chr2_2:70468896-70468915 None:intergenic 35.0%
ACGTTTCAAATACCACACAT+GGG + chr2_2:70468986-70469005 None:intergenic 35.0%
AACATGAAGCTCAGAATTCA+TGG - chr2_2:70469181-70469200 Msa0268990:CDS 35.0%
ACATGAAGCTCAGAATTCAT+GGG - chr2_2:70469182-70469201 Msa0268990:CDS 35.0%
TCCCAAATCAATAAGGGAAT+TGG - chr2_2:70469217-70469236 Msa0268990:CDS 35.0%
! GACCAATTCCCTTATTGATT+TGG + chr2_2:70469222-70469241 None:intergenic 35.0%
! TCAATAAGGGAATTGGTCTA+TGG - chr2_2:70469224-70469243 Msa0268990:CDS 35.0%
GAAGTCTATCTATCGCATAT+AGG - chr2_2:70469402-70469421 Msa0268990:CDS 35.0%
ATATAGGCTTAAAGACATCG+TGG - chr2_2:70469418-70469437 Msa0268990:CDS 35.0%
TTGGATAGGATCCAATAAGA+TGG + chr2_2:70469841-70469860 None:intergenic 35.0%
GGATACTGTATTTCCAAGAT+TGG + chr2_2:70469937-70469956 None:intergenic 35.0%
CTTGAGTAGCAAAAAAGAGT+GGG + chr2_2:70469958-70469977 None:intergenic 35.0%
ACGAGAACAATTAGTTGATC+TGG - chr2_2:70470027-70470046 Msa0268990:intron 35.0%
ATGGAAAGAATTAGGAGAAG+AGG - chr2_2:70470084-70470103 Msa0268990:intron 35.0%
TGGAAAGAATTAGGAGAAGA+GGG - chr2_2:70470085-70470104 Msa0268990:intron 35.0%
! CCATTCATTTTCATTGTCAG+TGG + chr2_2:70470113-70470132 None:intergenic 35.0%
CCACTGACAATGAAAATGAA+TGG - chr2_2:70470110-70470129 Msa0268990:intron 35.0%
AGACATAAAACCATCCATTC+TGG + chr2_2:70470220-70470239 None:intergenic 35.0%
TGAATAATCGGTCTCAATTC+GGG + chr2_2:70470259-70470278 None:intergenic 35.0%
CCGATTATTCAAATAGATGG+AGG - chr2_2:70470268-70470287 Msa0268990:intron 35.0%
! ATTATCAAGGAGTGTATCCA+CGG + chr2_2:70470431-70470450 None:intergenic 35.0%
AGATATAATTGAGGGCAAAG+AGG - chr2_2:70470507-70470526 Msa0268990:intron 35.0%
GATATAATTGAGGGCAAAGA+GGG - chr2_2:70470508-70470527 Msa0268990:intron 35.0%
!! GGAAAACGAGTTGATTATTC+GGG - chr2_2:70470553-70470572 Msa0268990:intron 35.0%
!! GAAAACGAGTTGATTATTCG+GGG - chr2_2:70470554-70470573 Msa0268990:intron 35.0%
CATCGATGTAATGAAAGTGA+TGG + chr2_2:70470601-70470620 None:intergenic 35.0%
TCACTTTCATTACATCGATG+TGG - chr2_2:70470601-70470620 Msa0268990:intron 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr2_2:70470633-70470652 None:intergenic 35.0%
GGAAAAAGAACCGATTGTAT+GGG - chr2_2:70470729-70470748 Msa0268990:intron 35.0%
ATACTTCAAGAAGTTATGCG+GGG - chr2_2:70470754-70470773 Msa0268990:intron 35.0%
TTGAATCCCTTACACACTAA+TGG + chr2_2:70470877-70470896 None:intergenic 35.0%
GATTCAATGCAGACTTTGAT+GGG - chr2_2:70470890-70470909 Msa0268990:intron 35.0%
ATTCAATGCAGACTTTGATG+GGG - chr2_2:70470891-70470910 Msa0268990:intron 35.0%
TGTTCATGTGCCTTTATCTT+TGG - chr2_2:70470924-70470943 Msa0268990:intron 35.0%
!! AAGCATATCTTGAGTTGGTA+CGG + chr2_2:70471025-70471044 None:intergenic 35.0%
CCTATAAGCATATCTTGAGT+TGG + chr2_2:70471030-70471049 None:intergenic 35.0%
CCAACTCAAGATATGCTTAT+AGG - chr2_2:70471027-70471046 Msa0268990:intron 35.0%
GGCCTTTATGTATTAACTAG+CGG - chr2_2:70471048-70471067 Msa0268990:intron 35.0%
TGCAATTCCTATGATGCAAT+TGG - chr2_2:70471186-70471205 Msa0268990:intron 35.0%
ATAAGCTCCAATTGCATCAT+AGG + chr2_2:70471196-70471215 None:intergenic 35.0%
GATTCATAGTGAACTTCGAT+AGG + chr2_2:70471300-70471319 None:intergenic 35.0%
! TTTTCTCGAGCCTATTCATA+TGG - chr2_2:70471455-70471474 Msa0268990:intron 35.0%
TATGATACTGGCGTAAATTC+AGG - chr2_2:70471530-70471549 Msa0268990:intron 35.0%
GTCTTTCACAATAACGTGAT+AGG - chr2_2:70471692-70471711 Msa0268990:CDS 35.0%
TTTCACAATAACGTGATAGG+TGG - chr2_2:70471695-70471714 Msa0268990:CDS 35.0%
ATGTATATGCCATTCCGAAA+TGG + chr2_2:70471757-70471776 None:intergenic 35.0%
TGGATCAAGTAAAGACTCTA+GGG - chr2_2:70471786-70471805 Msa0268990:intron 35.0%
!! AACTTTGTTGTTCAGCATCT+TGG + chr2_2:70471889-70471908 None:intergenic 35.0%
TACGCCAATCCATTGAAATA+TGG - chr2_2:70471960-70471979 Msa0268990:CDS 35.0%
TTCTGGTATCATTCCATTTC+GGG + chr2_2:70472362-70472381 None:intergenic 35.0%
TCAGAATTGTAACCTTCCCA+TGG + chr2_2:70467399-70467418 None:intergenic 40.0%
TGTACTCATTAGTGAACGTC+TGG - chr2_2:70467425-70467444 Msa0268990:CDS 40.0%
TAGTGATTCTTTCAGGACCA+TGG + chr2_2:70467513-70467532 None:intergenic 40.0%
! AGTAAATGGGCTTCTAGATG+TGG + chr2_2:70467544-70467563 None:intergenic 40.0%
!! GAATTGTGATTCTGGGATCT+TGG - chr2_2:70467582-70467601 Msa0268990:CDS 40.0%
GGGTAAATTAACGCCTCAAA+TGG - chr2_2:70467628-70467647 Msa0268990:CDS 40.0%
TAATCTATCTTCCGGAGCAT+AGG + chr2_2:70467666-70467685 None:intergenic 40.0%
AAACTACCTATAGGTGGTAG+GGG - chr2_2:70467737-70467756 Msa0268990:CDS 40.0%
AAAGTAGGTGATAAAGTGGC+CGG - chr2_2:70467853-70467872 Msa0268990:CDS 40.0%
GGTCTTCCATCTTGCAAATA+AGG + chr2_2:70467930-70467949 None:intergenic 40.0%
! TGGGTTGAAGACCATATCAA+CGG + chr2_2:70467952-70467971 None:intergenic 40.0%
GATATGGTCTTCAACCCATT+AGG - chr2_2:70467954-70467973 Msa0268990:CDS 40.0%
TATGGTCTTCAACCCATTAG+GGG - chr2_2:70467956-70467975 Msa0268990:CDS 40.0%
TGTCCTACATTCATTCGTGA+GGG + chr2_2:70467984-70468003 None:intergenic 40.0%
!! AATGTTCACTCGGATTAGCT+GGG - chr2_2:70468012-70468031 Msa0268990:CDS 40.0%
TGATGAGAGATATGAACAGG+AGG - chr2_2:70468069-70468088 Msa0268990:CDS 40.0%
TACTCGGGTTCAAATATCCA+TGG + chr2_2:70468151-70468170 None:intergenic 40.0%
GATATTTGAACCCGAGTATC+CGG - chr2_2:70468153-70468172 Msa0268990:CDS 40.0%
ATATTTGAACCCGAGTATCC+GGG - chr2_2:70468154-70468173 Msa0268990:CDS 40.0%
TCAAATATTCCGCTCTTTCC+CGG + chr2_2:70468175-70468194 None:intergenic 40.0%
GGAAAGAGCGGAATATTTGA+TGG - chr2_2:70468175-70468194 Msa0268990:CDS 40.0%
AAAATACATGGACGTTCCAG+TGG - chr2_2:70468277-70468296 Msa0268990:intron 40.0%
AACAAGTGCATAATGTCCAC+TGG + chr2_2:70468296-70468315 None:intergenic 40.0%
ACACAACAACCCCTTAAAGA+AGG - chr2_2:70468316-70468335 Msa0268990:intron 40.0%
CACAACAACCCCTTAAAGAA+GGG - chr2_2:70468317-70468336 Msa0268990:intron 40.0%
TTGTTTCGCCCTTCTTTAAG+GGG + chr2_2:70468328-70468347 None:intergenic 40.0%
CTTGTTTCGCCCTTCTTTAA+GGG + chr2_2:70468329-70468348 None:intergenic 40.0%
TAAAGCTCGTCAAGAAGACT+CGG - chr2_2:70468444-70468463 Msa0268990:intron 40.0%
AGACTCGGAACTACGATTAT+TGG - chr2_2:70468459-70468478 Msa0268990:intron 40.0%
AGGAACAATACCTAAACCTG+TGG - chr2_2:70468482-70468501 Msa0268990:intron 40.0%
ACGAGCAATCGAAAAGATTC+TGG + chr2_2:70468513-70468532 None:intergenic 40.0%
TGGAAGTCTTCTCAGATACA+AGG + chr2_2:70468575-70468594 None:intergenic 40.0%
GAGAAGACTTCCAGATTCAA+AGG - chr2_2:70468582-70468601 Msa0268990:intron 40.0%
AGACTTCCAGATTCAAAGGA+AGG - chr2_2:70468586-70468605 Msa0268990:intron 40.0%
GAGAAACTGATCCAATTCGA+AGG + chr2_2:70468672-70468691 None:intergenic 40.0%
CTCCTGAACAAATAAGTGCT+TGG - chr2_2:70468689-70468708 Msa0268990:intron 40.0%
AAAAGTGGGATTTGTGCTTG+TGG - chr2_2:70468835-70468854 Msa0268990:CDS 40.0%
TCGGGTACGTAGATATCAAA+TGG - chr2_2:70468933-70468952 Msa0268990:CDS 40.0%
CGGGTACGTAGATATCAAAT+GGG - chr2_2:70468934-70468953 Msa0268990:CDS 40.0%
GGGTACGTAGATATCAAATG+GGG - chr2_2:70468935-70468954 Msa0268990:CDS 40.0%
! AAATACCACACATGGGTTAC+TGG + chr2_2:70468979-70468998 None:intergenic 40.0%
GACGTTTCAAATACCACACA+TGG + chr2_2:70468987-70469006 None:intergenic 40.0%
CTCTATCTGACATGTCTCTT+GGG - chr2_2:70469152-70469171 Msa0268990:CDS 40.0%
TTAGAGGATTCTTCGTTCGA+AGG - chr2_2:70469552-70469571 Msa0268990:CDS 40.0%
TAGAGGATTCTTCGTTCGAA+GGG - chr2_2:70469553-70469572 Msa0268990:CDS 40.0%
AAATACTTTAGCCGGATGAG+AGG - chr2_2:70469782-70469801 Msa0268990:CDS 40.0%
GGCCTAGCAAACGAAAAATT+TGG + chr2_2:70469860-70469879 None:intergenic 40.0%
CCTCGTAATCGTAAGAAAGT+AGG + chr2_2:70469896-70469915 None:intergenic 40.0%
CCTACTTTCTTACGATTACG+AGG - chr2_2:70469893-70469912 Msa0268990:CDS 40.0%
CCTTGAGTAGCAAAAAAGAG+TGG + chr2_2:70469959-70469978 None:intergenic 40.0%
!!! CCACTCTTTTTTGCTACTCA+AGG - chr2_2:70469956-70469975 Msa0268990:intron 40.0%
!! AGAGAAATTTCTAGTGGAGC+AGG - chr2_2:70469998-70470017 Msa0268990:intron 40.0%
! TGGATTCTTCGTTGGTAGAA+TGG - chr2_2:70470065-70470084 Msa0268990:intron 40.0%
GAATGGGAAGATCGAAAAGT+AGG - chr2_2:70470127-70470146 Msa0268990:intron 40.0%
!!! GAATTTTTTGGTTCGACGCA+TGG - chr2_2:70470159-70470178 Msa0268990:intron 40.0%
TGGAGGGAAACTAATGAGTT+CGG - chr2_2:70470285-70470304 Msa0268990:intron 40.0%
ACAACAAGTAGATCTACACC+AGG - chr2_2:70470367-70470386 Msa0268990:intron 40.0%
CAACAAGTAGATCTACACCA+GGG - chr2_2:70470368-70470387 Msa0268990:intron 40.0%
AACAAGTAGATCTACACCAG+GGG - chr2_2:70470369-70470388 Msa0268990:intron 40.0%
TGACACATTACTAATTCCCC+TGG + chr2_2:70470388-70470407 None:intergenic 40.0%
AAAATTGGTACAAGAAGCCG+TGG - chr2_2:70470411-70470430 Msa0268990:intron 40.0%
GTGGATACACTCCTTGATAA+TGG - chr2_2:70470430-70470449 Msa0268990:intron 40.0%
TTATTATGACCGTCCCTCAT+TGG + chr2_2:70470469-70470488 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr2_2:70470632-70470651 None:intergenic 40.0%
GGGAAAAAGAACCGATTGTA+TGG - chr2_2:70470728-70470747 Msa0268990:intron 40.0%
TACTTCAAGAAGTTATGCGG+GGG - chr2_2:70470755-70470774 Msa0268990:intron 40.0%
TTTGCATAGATTGGGCATAC+AGG - chr2_2:70470807-70470826 Msa0268990:intron 40.0%
GCACGTCCTTCTACTAAAAT+AGG + chr2_2:70470841-70470860 None:intergenic 40.0%
GGATTCAATGCAGACTTTGA+TGG - chr2_2:70470889-70470908 Msa0268990:intron 40.0%
AGACTTTGATGGGGATCAAA+TGG - chr2_2:70470900-70470919 Msa0268990:intron 40.0%
TCATGTGCCTTTATCTTTGG+AGG - chr2_2:70470927-70470946 Msa0268990:intron 40.0%
TCATACAAACCTCTTGTCTC+CGG - chr2_2:70470981-70471000 Msa0268990:intron 40.0%
!! TCTTGAGTTGGTACGGAAAT+GGG + chr2_2:70471018-70471037 None:intergenic 40.0%
!! ATCTTGAGTTGGTACGGAAA+TGG + chr2_2:70471019-70471038 None:intergenic 40.0%
!! GTTAGTGTTGATATCCAGCT+AGG - chr2_2:70471496-70471515 Msa0268990:intron 40.0%
ATATTCCACTCAGTGGGATT+CGG + chr2_2:70471641-70471660 None:intergenic 40.0%
!! GTGGAATATGGAGGTACTTA+TGG - chr2_2:70471652-70471671 Msa0268990:CDS 40.0%
CTAGAGTCTTTACTTGATCC+AGG + chr2_2:70471787-70471806 None:intergenic 40.0%
CTGGATCAAGTAAAGACTCT+AGG - chr2_2:70471785-70471804 Msa0268990:intron 40.0%
TAGATGTAGCAGTAGCTTGA+CGG + chr2_2:70471814-70471833 None:intergenic 40.0%
TCAGTATGGGAATGTACATG+CGG - chr2_2:70471928-70471947 Msa0268990:CDS 40.0%
GGGTCAGTCATCCTAAAATT+AGG + chr2_2:70472022-70472041 None:intergenic 40.0%
!!! ATGTCTTTTTCAGGAGCTAG+AGG - chr2_2:70472061-70472080 Msa0268990:intron 40.0%
TCTCAAGTGCACCAATTAGT+CGG - chr2_2:70472091-70472110 Msa0268990:intron 40.0%
ATCCTCTCATTCCGACTAAT+TGG + chr2_2:70472105-70472124 None:intergenic 40.0%
GGATTAATGTCAGATCCACA+AGG - chr2_2:70472121-70472140 Msa0268990:intron 40.0%
ACGTATTCCTACAGGTAAAG+GGG + chr2_2:70472533-70472552 None:intergenic 40.0%
GACGTATTCCTACAGGTAAA+GGG + chr2_2:70472534-70472553 None:intergenic 40.0%
AGACGTATTCCTACAGGTAA+AGG + chr2_2:70472535-70472554 None:intergenic 40.0%
TTACCTGTAGGAATACGTCT+TGG - chr2_2:70472535-70472554 Msa0268990:CDS 40.0%
GTAGCTTATATGCCATGGGA+AGG - chr2_2:70467384-70467403 Msa0268990:CDS 45.0%
TGGGATCTTGGGTAGAAACA+GGG - chr2_2:70467594-70467613 Msa0268990:CDS 45.0%
GAGGATTCTTTCGCCATTTG+AGG + chr2_2:70467644-70467663 None:intergenic 45.0%
GAAAGAATCCTCCTATGCTC+CGG - chr2_2:70467652-70467671 Msa0268990:CDS 45.0%
ACGAGCTATACTTGGGATTC+AGG - chr2_2:70467688-70467707 Msa0268990:CDS 45.0%
!! GATTCAGGTATCGACCTCAA+AGG - chr2_2:70467703-70467722 Msa0268990:CDS 45.0%
GCCGAGTTATTGATGTGAGA+TGG - chr2_2:70467759-70467778 Msa0268990:CDS 45.0%
AAGTAGGTGATAAAGTGGCC+GGG - chr2_2:70467854-70467873 Msa0268990:CDS 45.0%
AGATGGAAGACCCGTTGATA+TGG - chr2_2:70467938-70467957 Msa0268990:CDS 45.0%
GGGTTGAAGACCATATCAAC+GGG + chr2_2:70467951-70467970 None:intergenic 45.0%
GTACCCTCACGAATGAATGT+AGG - chr2_2:70467978-70467997 Msa0268990:CDS 45.0%
CTGTCCTACATTCATTCGTG+AGG + chr2_2:70467985-70468004 None:intergenic 45.0%
!! GAATGTTCACTCGGATTAGC+TGG - chr2_2:70468011-70468030 Msa0268990:CDS 45.0%
! CCTTGTTTCGCCCTTCTTTA+AGG + chr2_2:70468330-70468349 None:intergenic 45.0%
CCTTAAAGAAGGGCGAAACA+AGG - chr2_2:70468327-70468346 Msa0268990:intron 45.0%
TAAAGAAGGGCGAAACAAGG+AGG - chr2_2:70468330-70468349 Msa0268990:intron 45.0%
CTCGGAACTACGATTATTGG+AGG - chr2_2:70468462-70468481 Msa0268990:intron 45.0%
!! AAAGATTCTGGAGCATCCAC+AGG + chr2_2:70468501-70468520 None:intergenic 45.0%
CGTTCGAGAACTACGATCTT+TGG - chr2_2:70468530-70468549 Msa0268990:intron 45.0%
! AGAACTACGATCTTTGGCTC+TGG - chr2_2:70468536-70468555 Msa0268990:intron 45.0%
GCCCAAGCACTTATTTGTTC+AGG + chr2_2:70468694-70468713 None:intergenic 45.0%
CCAAGAGACATGTCAGATAG+AGG + chr2_2:70469154-70469173 None:intergenic 45.0%
CCTCTATCTGACATGTCTCT+TGG - chr2_2:70469151-70469170 Msa0268990:CDS 45.0%
! CCTTTGAAAATCGGACGTGA+GGG + chr2_2:70469811-70469830 None:intergenic 45.0%
! CCTCACGTCCGATTTTCAAA+GGG - chr2_2:70469809-70469828 Msa0268990:CDS 45.0%
! CTCACGTCCGATTTTCAAAG+GGG - chr2_2:70469810-70469829 Msa0268990:CDS 45.0%
! TCACGTCCGATTTTCAAAGG+GGG - chr2_2:70469811-70469830 Msa0268990:CDS 45.0%
! GGATCTCCCCCTTTGAAAAT+CGG + chr2_2:70469820-70469839 None:intergenic 45.0%
AAGGGGGAGATCCATCTTAT+TGG - chr2_2:70469827-70469846 Msa0268990:CDS 45.0%
ATAATCGGTCTCAATTCGGG+AGG + chr2_2:70470256-70470275 None:intergenic 45.0%
!! CTCCTTGATAATGGAATCCG+CGG - chr2_2:70470439-70470458 Msa0268990:intron 45.0%
AGATTTCGAGAGACTCTGCT+TGG - chr2_2:70470532-70470551 Msa0268990:intron 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr2_2:70470631-70470650 None:intergenic 45.0%
GCTTGAGCCTCCAAAGATAA+AGG + chr2_2:70470937-70470956 None:intergenic 45.0%
TTAACTAGCGGAAATCGTCG+AGG - chr2_2:70471060-70471079 Msa0268990:intron 45.0%
! GTCGAGGTATTTGTGCAAAC+AGG - chr2_2:70471076-70471095 Msa0268990:intron 45.0%
!!! TCGATAGTCCTTTTTGGCTC+CGG - chr2_2:70471235-70471254 Msa0268990:intron 45.0%
! TGCATTGATCTATTCGCCAC+CGG + chr2_2:70471257-70471276 None:intergenic 45.0%
GAATCCCACTGAGTGGAATA+TGG - chr2_2:70471640-70471659 Msa0268990:CDS 45.0%
ACCTCCATATTCCACTCAGT+GGG + chr2_2:70471647-70471666 None:intergenic 45.0%
TACCTCCATATTCCACTCAG+TGG + chr2_2:70471648-70471667 None:intergenic 45.0%
!! TGGAGGTACTTATGGCAGAA+CGG - chr2_2:70471660-70471679 Msa0268990:CDS 45.0%
GGCATATACATCACACATCC+TGG - chr2_2:70471766-70471785 Msa0268990:intron 45.0%
!! TGGACTAGCCATCCTTTAGA+AGG + chr2_2:70471869-70471888 None:intergenic 45.0%
CACCAATTAGTCGGAATGAG+AGG - chr2_2:70472100-70472119 Msa0268990:intron 45.0%
AGTATCCACAACCCCTTTAC+GGG + chr2_2:70472227-70472246 None:intergenic 45.0%
CAGTATCCACAACCCCTTTA+CGG + chr2_2:70472228-70472247 None:intergenic 45.0%
!! TACACGTCGACTTGTTGAAG+TGG - chr2_2:70472276-70472295 Msa0268990:CDS 45.0%
GTTGTACGTCGAACAGATTG+CGG - chr2_2:70472310-70472329 Msa0268990:CDS 45.0%
ATTCGAACCCCTTTACCTGT+AGG - chr2_2:70472523-70472542 Msa0268990:CDS 45.0%
GATCCAAGACGTATTCCTAC+AGG + chr2_2:70472541-70472560 None:intergenic 45.0%
! TGGATCTGCCGATTGTGTTA+TGG - chr2_2:70472555-70472574 Msa0268990:CDS 45.0%
! GGATCTGCCGATTGTGTTAT+GGG - chr2_2:70472556-70472575 Msa0268990:CDS 45.0%
!!! AAAAAAAAATTATTTTTTTG+TGG - chr2_2:70469300-70469319 Msa0268990:CDS 5.0%
!!! TATTAAAAATTTTATTTTAG+AGG - chr2_2:70469536-70469555 Msa0268990:CDS 5.0%
CAGACTCATGTGACAAGCCA+TGG - chr2_2:70467493-70467512 Msa0268990:CDS 50.0%
CTGGGATCTTGGGTAGAAAC+AGG - chr2_2:70467593-70467612 Msa0268990:CDS 50.0%
GGGATCTTGGGTAGAAACAG+GGG - chr2_2:70467595-70467614 Msa0268990:CDS 50.0%
TCTATCTTCCGGAGCATAGG+AGG + chr2_2:70467663-70467682 None:intergenic 50.0%
GGCCGGGAGACATGAAATAA+AGG - chr2_2:70467870-70467889 Msa0268990:CDS 50.0%
!! TTCGTGAGGGTACCCCTAAT+GGG + chr2_2:70467971-70467990 None:intergenic 50.0%
!! ATTCGTGAGGGTACCCCTAA+TGG + chr2_2:70467972-70467991 None:intergenic 50.0%
GAAACAAGGAGGACAACGGT+AGG - chr2_2:70468341-70468360 Msa0268990:intron 50.0%
GGTAGGCGAAATGGAGGTTT+GGG - chr2_2:70468358-70468377 Msa0268990:intron 50.0%
! TCTGGAGCATCCACAGGTTT+AGG + chr2_2:70468495-70468514 None:intergenic 50.0%
CATGTCCAGTAACCCATGTG+TGG - chr2_2:70468971-70468990 Msa0268990:CDS 50.0%
AGGATTCTTCGTTCGAAGGG+AGG - chr2_2:70469556-70469575 Msa0268990:CDS 50.0%
! CCCTCACGTCCGATTTTCAA+AGG - chr2_2:70469808-70469827 Msa0268990:CDS 50.0%
! CCCTTTGAAAATCGGACGTG+AGG + chr2_2:70469812-70469831 None:intergenic 50.0%
CTCAATTCGGGAGGAAGAAC+TGG + chr2_2:70470247-70470266 None:intergenic 50.0%
GTCCGCGGATTCCATTATCA+AGG + chr2_2:70470444-70470463 None:intergenic 50.0%
AATCCGCGGACAACCAATGA+GGG - chr2_2:70470453-70470472 Msa0268990:intron 50.0%
GGGCGTTCTGTTATTGTCGT+AGG - chr2_2:70470574-70470593 Msa0268990:intron 50.0%
GGCGCTCTATTCAGCAATAC+TGG + chr2_2:70470784-70470803 None:intergenic 50.0%
AACCTCTTGTCTCCGGCTAT+TGG - chr2_2:70470988-70471007 Msa0268990:intron 50.0%
ACCTCTTGTCTCCGGCTATT+GGG - chr2_2:70470989-70471008 Msa0268990:intron 50.0%
GAAATGGGATCCCCAATAGC+CGG + chr2_2:70471003-70471022 None:intergenic 50.0%
!!! ATAGTCCTTTTTGGCTCCGG+TGG - chr2_2:70471238-70471257 Msa0268990:intron 50.0%
TCCCACTGAGTGGAATATGG+AGG - chr2_2:70471643-70471662 Msa0268990:CDS 50.0%
!! GGAGGTACTTATGGCAGAAC+GGG - chr2_2:70471661-70471680 Msa0268990:CDS 50.0%
GCTGTACGAACATCAGATGC+TGG - chr2_2:70472247-70472266 Msa0268990:CDS 50.0%
ACAGATTGCGGTACGATTCG+CGG - chr2_2:70472322-70472341 Msa0268990:CDS 50.0%
! TCTGCCGATTGTGTTATGGG+CGG - chr2_2:70472559-70472578 Msa0268990:CDS 50.0%
GACTCCGCCCATAACACAAT+CGG + chr2_2:70472566-70472585 None:intergenic 50.0%
TATGGGCGGAGTCCTATTCA+TGG - chr2_2:70472573-70472592 Msa0268990:CDS 50.0%
ATGGGCGGAGTCCTATTCAT+GGG - chr2_2:70472574-70472593 Msa0268990:CDS 50.0%
!! GCAGATGGTGCTGCTACTGT+TGG - chr2_2:70467330-70467349 Msa0268990:CDS 55.0%
!! GATGGTGCTGCTACTGTTGG+CGG - chr2_2:70467333-70467352 Msa0268990:CDS 55.0%
TGTTGGCGGTGAACTCGCTT+TGG - chr2_2:70467347-70467366 Msa0268990:CDS 55.0%
GTTGGCGGTGAACTCGCTTT+GGG - chr2_2:70467348-70467367 Msa0268990:CDS 55.0%
TCCGCTCTTTCCCGGATACT+CGG + chr2_2:70468167-70468186 None:intergenic 55.0%
GGGCGAAACAAGGAGGACAA+CGG - chr2_2:70468337-70468356 Msa0268990:intron 55.0%
GAGGACAACGGTAGGCGAAA+TGG - chr2_2:70468349-70468368 Msa0268990:intron 55.0%
GACAACGGTAGGCGAAATGG+AGG - chr2_2:70468352-70468371 Msa0268990:intron 55.0%
CGGTAGGCGAAATGGAGGTT+TGG - chr2_2:70468357-70468376 Msa0268990:intron 55.0%
ACATCGTGGCATAACCGTCG+AGG - chr2_2:70469432-70469451 Msa0268990:CDS 55.0%
AGGTCAAGACGTCACCTCGA+CGG + chr2_2:70469449-70469468 None:intergenic 55.0%
CGTGAGGGTTTCCTCTCATC+CGG + chr2_2:70469796-70469815 None:intergenic 55.0%
GAATCCGCGGACAACCAATG+AGG - chr2_2:70470452-70470471 Msa0268990:intron 55.0%
CCTCTTGTCTCCGGCTATTG+GGG - chr2_2:70470990-70471009 Msa0268990:intron 55.0%
ATTCGCCACCGGAGCCAAAA+AGG + chr2_2:70471246-70471265 None:intergenic 55.0%
TCGAACCGAATCCCACTGAG+TGG - chr2_2:70471633-70471652 Msa0268990:CDS 55.0%
TCTTGCTACGGAGCCCGTAA+AGG - chr2_2:70472211-70472230 Msa0268990:CDS 55.0%
CTTGCTACGGAGCCCGTAAA+GGG - chr2_2:70472212-70472231 Msa0268990:CDS 55.0%
TTGCTACGGAGCCCGTAAAG+GGG - chr2_2:70472213-70472232 Msa0268990:CDS 55.0%
CAGATTGCGGTACGATTCGC+GGG - chr2_2:70472323-70472342 Msa0268990:CDS 55.0%
TGGGCGGAGTCCTATTCATG+GGG - chr2_2:70472575-70472594 Msa0268990:CDS 55.0%
GAGTCCTATTCATGGGGACC+TGG - chr2_2:70472581-70472600 Msa0268990:CDS 55.0%
ACTCGGCCCCTACCACCTAT+AGG + chr2_2:70467746-70467765 None:intergenic 60.0%
CCGCTCTTTCCCGGATACTC+GGG + chr2_2:70468166-70468185 None:intergenic 60.0%
CCCGAGTATCCGGGAAAGAG+CGG - chr2_2:70468163-70468182 Msa0268990:CDS 60.0%
AATGGAGGTTTGGGCGCTCG+AGG - chr2_2:70468367-70468386 Msa0268990:intron 60.0%
ATGGAGGTTTGGGCGCTCGA+GGG - chr2_2:70468368-70468387 Msa0268990:intron 60.0%
! CGTCCCTCATTGGTTGTCCG+CGG + chr2_2:70470459-70470478 None:intergenic 60.0%
CGCGGACAACCAATGAGGGA+CGG - chr2_2:70470457-70470476 Msa0268990:intron 60.0%
CCCCAATAGCCGGAGACAAG+AGG + chr2_2:70470993-70471012 None:intergenic 60.0%
TGGAGGTTTGGGCGCTCGAG+GGG - chr2_2:70468369-70468388 Msa0268990:intron 65.0%
GTTTGGGCGCTCGAGGGGTT+CGG - chr2_2:70468374-70468393 Msa0268990:intron 65.0%
CGGAGCCCGTAAAGGGGTTG+TGG - chr2_2:70472219-70472238 Msa0268990:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 70467306 70472606 70467306 ID=Msa0268990;Name=Msa0268990
chr2_2 mRNA 70467306 70472606 70467306 ID=Msa0268990-mRNA-1;Parent=Msa0268990;Name=Msa0268990-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0.8|0.66|6|0|892
chr2_2 exon 70472466 70472606 70472466 ID=Msa0268990-mRNA-1:exon:22635;Parent=Msa0268990-mRNA-1
chr2_2 exon 70472203 70472361 70472203 ID=Msa0268990-mRNA-1:exon:22634;Parent=Msa0268990-mRNA-1
chr2_2 exon 70471877 70471991 70471877 ID=Msa0268990-mRNA-1:exon:22633;Parent=Msa0268990-mRNA-1
chr2_2 exon 70471554 70471784 70471554 ID=Msa0268990-mRNA-1:exon:22632;Parent=Msa0268990-mRNA-1
chr2_2 exon 70468831 70469934 70468831 ID=Msa0268990-mRNA-1:exon:22631;Parent=Msa0268990-mRNA-1
chr2_2 exon 70467306 70468234 70467306 ID=Msa0268990-mRNA-1:exon:22630;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70472466 70472606 70472466 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70472203 70472361 70472203 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70471877 70471991 70471877 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70471554 70471784 70471554 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70468831 70469934 70468831 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
chr2_2 CDS 70467306 70468234 70467306 ID=Msa0268990-mRNA-1:cds;Parent=Msa0268990-mRNA-1
Gene Sequence

>Msa0268990

ATGCGTAAAAAGGGACAAATTTTAGCAGATGGTGCTGCTACTGTTGGCGGTGAACTCGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTCTGAAGATGCTGTACTCATTAGTGAACGTCTGAAGCCCATTTACTCCGAAATTAGACAAAATGGAATTGTGATTCTGGGATCTTGGGTAGAAACAGGGGATATTTTAGTGGGTAAATTAACGCCTCAAATGGCGAAAGAATCCTCCTATGCTCCGGAAGATAGATTATTACGAGCTATACTTGGGATTCAGGATATGCCTTATTTGCAAGATGGAAGACCCGTTGATATGGTCTTCAACCCATTAGGGGTACCCTCACGAATGAATGTAGGACAGATATTGGAATGTTCACTCGGATTAGCTGGGACCAGTAAACAAACATCGAATCCATGGATATTTGAACCCGAGTATCCGGGAAAGAGCGGAATATTTGATGGAAGAACAGGGAATCCTTTTGAACAGCCTGTTATAATAGGAAAACCTTATATCTTGAAATTAATTCATCAAGTTGATGATAAAATACATGGACGTTCCAGTGGACATTATGCACTTGTTACACAACAACCCCTTAAAGAAGGGCGAAACAAGGAGGACAACGGTTTCGATACATTTCGAAATAGAGAAATTTCTAGTGGAGCAGGTGCTATACGAGAACAATTAGTTGATCTGGATTTAAGAATTATTATGGATTCTTCGTTGGTAGAATGGAAAGAATTAGGAGAAGAGGGATCCACTGACAATGAAAATGAATGGGAAGATCGAAAAGTAGGAAGAAGAAAGAATTTTTTGGTTCGACGCATGGAATTAGCTAAGCACTTTATCCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTCTTACCAGTTCTTCCTCCCGAATTGAGACCGATTATTCAAATAGATGGAGGGAAACTAATGAGTTCGGATATTAATGAACTCTATAGAAGAGTTATCTATCGGAACAATACTCTTATTGACCTATTAACAACAAGTAGATCTACACCAGGGGAATTAGTAATGTGTCAAGAAAAATTGGTACAAGAAGCCGTGGATACACTCCTTGATAATGGAATCCGCGGACAACCAATGAGGGACGGTCATAATAAAGTTTACAAATCGTTTTCAGATATAATTGAGGGCAAAGAGGGAAGATTTCGAGAGACTCTGCTTGGAAAACGAGTTGATTATTCGGGGCGTTCTGTTATTGTCGTAGGTCCATCACTTTCATTACATCGATGTGGATTGCCCCGCGAAATAGCAATAGAGCTATTTCAGACATTTCTAATTCGTGGTTTAATTCGAAAACATTTTGCTTCGAACATAGGAGTTGCTAAGAGTAAAATACGGGAAAAAGAACCGATTGTATGGGAAATACTTCAAGAAGTTATGCGGGGGCATCCAGTATTGCTGAATAGAGCGCCTACTTTGCATAGATTGGGCATACAGGCATTTCAACCTATTTTAGTAGAAGGACGTGCTATTTGTTTACATCCATTAGTGTGTAAGGGATTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATGTGCCTTTATCTTTGGAGGCTCAAGCAGAAGCTCGTTTACTTATGTTTTCTCATACAAACCTCTTGTCTCCGGCTATTGGGGATCCCATTTCCGTACCAACTCAAGATATGCTTATAGGCCTTTATGTATTAACTAGCGGAAATCGTCGAGAACGGGCCAATCTAGTCTTTCACAATAACGTGATAGGTGGAACTGCCATTAAACGACTTATTAGCAGATTAATAGACCATTTCGGAATGGCATATACATCACACATCCTGGATCAAGTAAAGACTCTAGGGTTCCGTCAAGCTACTGCTACATCTATTTCATTAGGAATTGATGATCTTTTAACAATACCTTCTAAAGGATGGCTAGTCCAAGATGCTGAACAACAAAGTTCTATTTTGGAAAAACATAATCAGTATGGGAATGTACATGCGGTAGAAAAATTACGCCAATCCATTGAAATATGGTATGCTACAAGCGAATATTTGCGACAAGAAATGAATCCTAATTTTAGGATGACTGACCCCTTTAATCCAGTCCATATAATGTCTTTTTCAGGAGCTAGAGGAAATGCATCTCAAGTGCACCAATTAGTCGGAATGAGAGGATTAATGTCAGATCCACAAGGACAAATGATTGATTTACCCATTCAAAGCAATTTACGAGAAGGACTGTCTTTAACAGAATATATAATTTCTTGCTACGGAGCCCGTAAAGGGGTTGTGGATACTGCTGTACGAACATCAGATGCTGGATATCTTACACGTCGACTTGTTGAAGTGGTTCAACACATTGTTGTACGTCGAACAGATTGCGGTACGATTCGCGGGATTTCTGTAAATACCCGAAATGGAATGATACCAGAAAGAATTTTGATACAAACATTAATTGGTCGTGTAGTAGCAGACGATATATATATCGGTTCACGGTGCATTGTCGTTAGAAATCAAGATATTGGAATTGGACTTATCAATCGATTCATAACTTTTCAAACACAACCAATATTTATTCGAACCCCTTTACCTGTAGGAATACGTCTTGGATCTGCCGATTGTGTTATGGGCGGAGTCCTATTCATGGGGACCTGGTAG
Protein sequence

>Msa0268990

MRKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLKPIYSEIRQNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQDMPYLQDGRPVDMVFNPLGVPSRMNVGQILECSLGLAGTSKQTSNPWIFEPEYPGKSGIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKEGRNKEDNGFDTFRNREISSGAGAIREQLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRERANLVFHNNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPSKGWLVQDAEQQSSILEKHNQYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVNTRNGMIPERILIQTLIGRVVADDIYIGSRCIVVRNQDIGIGLINRFITFQTQPIFIRTPLPVGIRLGSADCVMGGVLFMGTW*