Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0149980 | sp|Q8RXH2|NUP85_ARATH | 64.844 | 640 | 203 | 2 | 32 | 649 | 76 | 715 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0149980 | G7IB50 | 88.732 | 710 | 19 | 3 | 1 | 649 | 1 | 710 | 0.0 | 1266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071760 | Msa0149980 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0103660 | Msa0149980 | 0.834671 | 2.619079e-56 | -8.615850e-47 |
| Msa0139110 | Msa0149980 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0149980 | Msa0433060 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0149980 | Msa0524680 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0149980 | Msa0743920 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
| Msa0149980 | Msa0748180 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0149980 | Msa1036880 | 0.833874 | 4.150525e-56 | -8.615850e-47 |
| Msa0149980 | Msa1070810 | 0.830675 | 2.569826e-55 | -8.615850e-47 |
| Msa0149980 | Msa1115190 | 0.843628 | 1.246334e-58 | -8.615850e-47 |
| Msa0149980 | Msa1158630 | 0.829135 | 6.099034e-55 | -8.615850e-47 |
| Msa0149980 | Msa1163980 | 0.828478 | 8.790731e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0149980 | MtrunA17_Chr1g0146201 | 88.732 | 710 | 19 | 3 | 1 | 649 | 1 | 710 | 0.0 | 1266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0149980 | AT4G32910.1 | 64.844 | 640 | 203 | 2 | 32 | 649 | 76 | 715 | 0.0 | 850 |
Find 175 sgRNAs with CRISPR-Local
Find 796 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCAATTGGATGCACTTC+TGG | 0.108372 | 1_4:-11082916 | None:intergenic |
| AACTGGACTGCAGTCCATTT+TGG | 0.169208 | 1_4:+11082588 | Msa0149980:CDS |
| AACAGTTGAAGTTGCTAAAT+TGG | 0.174426 | 1_4:+11088617 | Msa0149980:intron |
| TGAATCTGCTGCTGGAAATT+TGG | 0.191846 | 1_4:+11082397 | Msa0149980:CDS |
| GGAAGGCTTAATTGAGTTAT+TGG | 0.193560 | 1_4:+11084513 | Msa0149980:CDS |
| AGGACGTAATCGAGGCATTT+TGG | 0.226952 | 1_4:-11082375 | None:intergenic |
| TGACATCACTTCCCAATATC+TGG | 0.236955 | 1_4:-11081961 | None:intergenic |
| AACCAATCAACAAGCCTTTC+AGG | 0.238952 | 1_4:-11078594 | None:intergenic |
| ATGCAAGATGTTAAATATAT+TGG | 0.247787 | 1_4:-11083841 | None:intergenic |
| CATCAACCCCTCAGCGCTTT+TGG | 0.251093 | 1_4:+11086673 | Msa0149980:CDS |
| TCTGTACAGCTTCATGTTAC+TGG | 0.257694 | 1_4:+11082687 | Msa0149980:CDS |
| TCTCTTGTAAGATATATATT+TGG | 0.261806 | 1_4:-11088822 | None:intergenic |
| GTAAAGGTGCTGGAGTATTT+TGG | 0.298412 | 1_4:+11084266 | Msa0149980:CDS |
| AGTACCTTAACAATTTCATT+TGG | 0.305958 | 1_4:-11078387 | None:intergenic |
| GGTTGCTGAGCTGGTCTAAT+TGG | 0.308819 | 1_4:-11082131 | None:intergenic |
| GTTCCGTTGTCGACGGTGTT+GGG | 0.320387 | 1_4:-11076961 | None:intergenic |
| AGTAGAAAGCATGTATAATT+TGG | 0.322991 | 1_4:+11082892 | Msa0149980:CDS |
| CAAACTTCAAGAGTTATCTT+TGG | 0.325826 | 1_4:+11088687 | Msa0149980:CDS |
| TCATTTGGGTCTTCAATAAT+CGG | 0.326782 | 1_4:-11078372 | None:intergenic |
| GAATCTGCTGCTGGAAATTT+GGG | 0.332696 | 1_4:+11082398 | Msa0149980:CDS |
| GAGGTCACAAATTACTAAAC+TGG | 0.342916 | 1_4:+11082571 | Msa0149980:CDS |
| ATTAAACTTACGATCATAAA+TGG | 0.349521 | 1_4:-11082746 | None:intergenic |
| TCGGTGGTTCAGTTAGAAAA+TGG | 0.352849 | 1_4:+11082323 | Msa0149980:intron |
| TCGAGGATGATCCCAGATAT+TGG | 0.361641 | 1_4:+11081949 | Msa0149980:CDS |
| TTATCACACTGAATCCAAAA+TGG | 0.362532 | 1_4:-11082602 | None:intergenic |
| TTTCGCCGGAGAATGGGATT+AGG | 0.367192 | 1_4:-11076984 | None:intergenic |
| TGTAAATTGCTATGCCCTAA+TGG | 0.370284 | 1_4:+11088911 | Msa0149980:three_prime_UTR |
| TTGTTGGTTTCGCCGGAGAA+TGG | 0.370686 | 1_4:-11076991 | None:intergenic |
| GCAGAAATTTCCAGAGAATT+CGG | 0.377381 | 1_4:+11083117 | Msa0149980:intron |
| TTTCAATTGGATGCACTTCT+GGG | 0.377909 | 1_4:-11082915 | None:intergenic |
| AAATTTCCAGCAGCAGATTC+AGG | 0.388449 | 1_4:-11082395 | None:intergenic |
| GCCTTTCAGGTAGCCATGCT+TGG | 0.390410 | 1_4:-11078581 | None:intergenic |
| GTACCTTAACAATTTCATTT+GGG | 0.391570 | 1_4:-11078386 | None:intergenic |
| GAAGGCTTAATTGAGTTATT+GGG | 0.393418 | 1_4:+11084514 | Msa0149980:CDS |
| TACCAGTAGGTGGTTTCAAT+TGG | 0.394720 | 1_4:-11082928 | None:intergenic |
| GGTTCCGTTGTCGACGGTGT+TGG | 0.395020 | 1_4:-11076962 | None:intergenic |
| TTCGCCGGAGAATGGGATTA+GGG | 0.395335 | 1_4:-11076983 | None:intergenic |
| TTGAACTCTTTGCTATACTA+AGG | 0.396804 | 1_4:-11089104 | None:intergenic |
| CTCAAGCACTGAGTTCTATT+AGG | 0.397034 | 1_4:+11088749 | Msa0149980:CDS |
| ACACAGCAACGTGTTGCTTA+AGG | 0.398343 | 1_4:+11083915 | Msa0149980:CDS |
| ACAACATATGATAACCATTA+GGG | 0.407799 | 1_4:-11088925 | None:intergenic |
| CGAGGATGATCCCAGATATT+GGG | 0.408443 | 1_4:+11081950 | Msa0149980:CDS |
| TTATCTCCTTGCTATATTGA+AGG | 0.410951 | 1_4:-11078314 | None:intergenic |
| TGTAAATTAATACCAGTATG+AGG | 0.416262 | 1_4:-11084757 | None:intergenic |
| AAACTTGCTACAAGTTATGC+TGG | 0.419969 | 1_4:+11082649 | Msa0149980:CDS |
| TACTTTGATAAAGTCAGGCT+TGG | 0.420018 | 1_4:-11082435 | None:intergenic |
| ACATGATGAGCGTTATAACT+TGG | 0.421274 | 1_4:+11083439 | Msa0149980:CDS |
| TGTTGGTTTCGCCGGAGAAT+GGG | 0.423799 | 1_4:-11076990 | None:intergenic |
| CTGGCTCTAGCAACAAATCT+TGG | 0.425294 | 1_4:+11088772 | Msa0149980:CDS |
| GAAAGCTGCATGGGAGTTGA+TGG | 0.426543 | 1_4:+11078533 | Msa0149980:CDS |
| TTGTTTAATATATAGGTTGC+TGG | 0.430551 | 1_4:+11084220 | Msa0149980:intron |
| AAGATACAAACAGTCTTGAT+AGG | 0.434188 | 1_4:+11084302 | Msa0149980:CDS |
| GGATATACTTTGATAAAGTC+AGG | 0.436579 | 1_4:-11082440 | None:intergenic |
| ATGAATTGTTTCTTGTGTAC+TGG | 0.437719 | 1_4:-11078739 | None:intergenic |
| AGACCCAAATGAAATTGTTA+AGG | 0.438019 | 1_4:+11078383 | Msa0149980:CDS |
| GAATGATCTTGTTAACATAC+AGG | 0.439241 | 1_4:+11078782 | Msa0149980:CDS |
| TGGGATTCTTGGAGAAAATA+CGG | 0.439715 | 1_4:+11082976 | Msa0149980:CDS |
| TACAACATATGATAACCATT+AGG | 0.443826 | 1_4:-11088926 | None:intergenic |
| TACCTGAAAGGCTTGTTGAT+TGG | 0.446469 | 1_4:+11078592 | Msa0149980:CDS |
| CAACAGTTATTTGATTCAGT+TGG | 0.446597 | 1_4:+11084331 | Msa0149980:CDS |
| TCAGTTAGAAAATGGATTAG+TGG | 0.447691 | 1_4:+11082331 | Msa0149980:intron |
| CCTTTCAGGTAGCCATGCTT+GGG | 0.454618 | 1_4:-11078580 | None:intergenic |
| GGGTGAGAGTGTGGTGGAGA+GGG | 0.454820 | 1_4:-11077032 | None:intergenic |
| GGGTCTTCAATAATCGGACT+AGG | 0.455946 | 1_4:-11078366 | None:intergenic |
| TTAAAAGTCCAGTCAACCTA+TGG | 0.457677 | 1_4:-11082952 | None:intergenic |
| TTCCGTTGTCGACGGTGTTG+GGG | 0.462046 | 1_4:-11076960 | None:intergenic |
| AGTACACAAGAAACAATTCA+TGG | 0.462245 | 1_4:+11078741 | Msa0149980:CDS |
| CAAAAGCGCTGAGGGGTTGA+TGG | 0.463978 | 1_4:-11086672 | None:intergenic |
| CACTGGAAGCATGGTCGTAA+AGG | 0.470394 | 1_4:+11084250 | Msa0149980:CDS |
| ATACCTCACGGTTGCTGAGC+TGG | 0.475934 | 1_4:-11082140 | None:intergenic |
| TGTGTTGGCTTTCAGAAGGC+AGG | 0.476061 | 1_4:+11088874 | Msa0149980:three_prime_UTR |
| TTTCTTGTGTACTGGTAAAG+AGG | 0.478084 | 1_4:-11078731 | None:intergenic |
| AGCTGTAGACTCCCTCATAC+TGG | 0.480950 | 1_4:+11084745 | Msa0149980:CDS |
| AATATATATCTTACAAGAGA+TGG | 0.481315 | 1_4:+11088825 | Msa0149980:three_prime_UTR |
| TTTATTTATCTTCCGAGGAA+TGG | 0.483252 | 1_4:+11089017 | Msa0149980:three_prime_UTR |
| TTACGTCCTGAATCTGCTGC+TGG | 0.483641 | 1_4:+11082389 | Msa0149980:CDS |
| TAATAGAACTCAGTGCTTGA+GGG | 0.485123 | 1_4:-11088747 | None:intergenic |
| ATCGGACTAGGGCCCAACTT+TGG | 0.488711 | 1_4:-11078354 | None:intergenic |
| GTGAAAATGTTGCGGTTGCA+TGG | 0.492578 | 1_4:+11082102 | Msa0149980:CDS |
| TCTTGCATGAAGCAAGGAAT+GGG | 0.493653 | 1_4:+11083856 | Msa0149980:CDS |
| AGTTGGTTGGCTAGATATAG+TGG | 0.495746 | 1_4:+11081995 | Msa0149980:CDS |
| CGACTCTGAAGCAACGCAAA+CGG | 0.501415 | 1_4:-11077255 | None:intergenic |
| CTAATAGAACTCAGTGCTTG+AGG | 0.501748 | 1_4:-11088748 | None:intergenic |
| AGAATTGTTGTTGGTTTCGC+CGG | 0.503079 | 1_4:-11076998 | None:intergenic |
| AGCACTGAGTTCTATTAGGC+TGG | 0.504352 | 1_4:+11088753 | Msa0149980:CDS |
| GCCGTGGAATTGTTAACTGC+AGG | 0.505740 | 1_4:+11083392 | Msa0149980:CDS |
| AGAAGGCAGGTGGAAGCGAC+CGG | 0.506028 | 1_4:+11088887 | Msa0149980:three_prime_UTR |
| AGGGCATAGCAATTTACAAC+CGG | 0.506314 | 1_4:-11088906 | None:intergenic |
| TTGTGACCTCCATTTCTCCC+AGG | 0.507500 | 1_4:-11082558 | None:intergenic |
| CGGGTGAGAGTGTGGTGGAG+AGG | 0.508221 | 1_4:-11077033 | None:intergenic |
| CGGAGATTGATGATGCTGAT+TGG | 0.511466 | 1_4:+11077205 | Msa0149980:CDS |
| AAGCATGGTCGTAAAGGTGC+TGG | 0.514756 | 1_4:+11084256 | Msa0149980:CDS |
| GGATCTGAATCTAAGCCTGC+TGG | 0.515189 | 1_4:+11084535 | Msa0149980:CDS |
| GGGGCAGCCAAAAGCGCTGA+GGG | 0.516515 | 1_4:-11086680 | None:intergenic |
| TAAGCTTGGAGGTGGAGATC+CGG | 0.518121 | 1_4:+11077185 | Msa0149980:intron |
| CATGATGAGCGTTATAACTT+GGG | 0.523441 | 1_4:+11083440 | Msa0149980:CDS |
| AGGTTGCTGGAGTCTATCAC+TGG | 0.527813 | 1_4:+11084233 | Msa0149980:intron |
| CTTCTCGTAGGGCCAAAGTT+GGG | 0.530077 | 1_4:+11078342 | Msa0149980:CDS |
| ATCCAATTGAAACCACCTAC+TGG | 0.531263 | 1_4:+11082926 | Msa0149980:CDS |
| GCTTCTCGTAGGGCCAAAGT+TGG | 0.532261 | 1_4:+11078341 | Msa0149980:CDS |
| GACATCACTTCCCAATATCT+GGG | 0.533296 | 1_4:-11081960 | None:intergenic |
| ACTGGTACCCATAGGTTGAC+TGG | 0.536812 | 1_4:+11082944 | Msa0149980:CDS |
| ATCTTGCATGAAGCAAGGAA+TGG | 0.537314 | 1_4:+11083855 | Msa0149980:CDS |
| CAATCAGCATCATCAATCTC+CGG | 0.538504 | 1_4:-11077204 | None:intergenic |
| AACAATTCATGGCAAGCTAG+TGG | 0.539756 | 1_4:+11078752 | Msa0149980:CDS |
| GCTGCCCCTTCTGGTTGACT+CGG | 0.543207 | 1_4:+11086695 | Msa0149980:CDS |
| CCCAAGCATGGCTACCTGAA+AGG | 0.543820 | 1_4:+11078580 | Msa0149980:CDS |
| TTCCACTGTATACCATCTGA+AGG | 0.545916 | 1_4:-11084700 | None:intergenic |
| TTGCGTTGCTTCAGAGTCGC+CGG | 0.548587 | 1_4:+11077259 | Msa0149980:CDS |
| AGTTAGGCTCAGTGAAGTGC+GGG | 0.549137 | 1_4:-11088720 | None:intergenic |
| GATTGCGAGAGAATTGTTGT+TGG | 0.550735 | 1_4:-11077007 | None:intergenic |
| CATCTGCATTGTCAGTTGGT+TGG | 0.554242 | 1_4:+11081982 | Msa0149980:CDS |
| CATGCAGCTTTCAAACATGT+TGG | 0.555788 | 1_4:-11078522 | None:intergenic |
| GATACATGATAGCCATTCCT+CGG | 0.559572 | 1_4:-11089029 | None:intergenic |
| GAGATAACATCGCTTCTCGT+AGG | 0.559748 | 1_4:+11078330 | Msa0149980:CDS |
| TCAGTATGGTGGAACTTCAT+CGG | 0.561377 | 1_4:+11083468 | Msa0149980:CDS |
| GTAAATTAATACCAGTATGA+GGG | 0.568574 | 1_4:-11084756 | None:intergenic |
| ATGTCATCTGCATTGTCAGT+TGG | 0.568749 | 1_4:+11081978 | Msa0149980:CDS |
| AGATAACATCGCTTCTCGTA+GGG | 0.568909 | 1_4:+11078331 | Msa0149980:CDS |
| TGTCATTCAACAGCCTGTGT+TGG | 0.569023 | 1_4:+11088859 | Msa0149980:three_prime_UTR |
| TATCATCACATGCATTGACA+TGG | 0.570630 | 1_4:+11083510 | Msa0149980:CDS |
| AACATGTTTGAAAGCTGCAT+GGG | 0.571606 | 1_4:+11078524 | Msa0149980:CDS |
| TGAAGATGCAACGTTGGTGT+CGG | 0.574493 | 1_4:-11089065 | None:intergenic |
| TCCACTGTATACCATCTGAA+GGG | 0.574565 | 1_4:-11084699 | None:intergenic |
| CAACATGTTTGAAAGCTGCA+TGG | 0.581798 | 1_4:+11078523 | Msa0149980:CDS |
| AGCCTGTGTTGGCTTTCAGA+AGG | 0.582667 | 1_4:+11088870 | Msa0149980:three_prime_UTR |
| TAAAAGTCCAGTCAACCTAT+GGG | 0.583832 | 1_4:-11082951 | None:intergenic |
| GGTCTTCAATAATCGGACTA+GGG | 0.584981 | 1_4:-11078365 | None:intergenic |
| AACTTGCTACAAGTTATGCT+GGG | 0.587027 | 1_4:+11082650 | Msa0149980:CDS |
| TTAACATCTTGCATGAAGCA+AGG | 0.589370 | 1_4:+11083850 | Msa0149980:CDS |
| TATCAGTTCAAATATCATGA+AGG | 0.592690 | 1_4:+11084087 | Msa0149980:CDS |
| GATTAGGGTTCCGTTGTCGA+CGG | 0.593798 | 1_4:-11076968 | None:intergenic |
| GGAACCCTAATCCCATTCTC+CGG | 0.597230 | 1_4:+11076979 | Msa0149980:CDS |
| ATGATGAGCGTTATAACTTG+GGG | 0.597621 | 1_4:+11083441 | Msa0149980:CDS |
| TATAGGCCTGGGAGAAATGG+AGG | 0.599849 | 1_4:+11082552 | Msa0149980:intron |
| ACATATTCGAAATCGCACTC+CGG | 0.600872 | 1_4:-11077278 | None:intergenic |
| GGAGTCTATCACTGGAAGCA+TGG | 0.601861 | 1_4:+11084241 | Msa0149980:CDS |
| GTTAGAAAATGGATTAGTGG+AGG | 0.602718 | 1_4:+11082334 | Msa0149980:intron |
| TTCAAGAGTTATCTTTGGCG+AGG | 0.603017 | 1_4:+11088692 | Msa0149980:CDS |
| GTTCATGCTGCAGGTTATCG+AGG | 0.603288 | 1_4:+11081932 | Msa0149980:intron |
| GTCTCAGATACACTGAGAAG+AGG | 0.605666 | 1_4:-11088649 | None:intergenic |
| TGCCTTCTGAAAGCCAACAC+AGG | 0.609220 | 1_4:-11088872 | None:intergenic |
| GTTGGCTTTCAGAAGGCAGG+TGG | 0.613069 | 1_4:+11088877 | Msa0149980:three_prime_UTR |
| TAGGATGGTTGCACACGCCG+TGG | 0.614378 | 1_4:+11083376 | Msa0149980:intron |
| CCGTGGAATTGTTAACTGCA+GGG | 0.616551 | 1_4:+11083393 | Msa0149980:CDS |
| TCCGTTGTCGACGGTGTTGG+GGG | 0.620804 | 1_4:-11076959 | None:intergenic |
| GATTGGCGAAGAATTGCGTA+TGG | 0.621414 | 1_4:+11077222 | Msa0149980:CDS |
| TGGACAAACAATCCCAAGCA+TGG | 0.625700 | 1_4:+11078568 | Msa0149980:CDS |
| ACTCACCGAGTCAACCAGAA+GGG | 0.625812 | 1_4:-11086700 | None:intergenic |
| CCCTGCAGTTAACAATTCCA+CGG | 0.627462 | 1_4:-11083393 | None:intergenic |
| TATGATCAAGCTCATATAAG+CGG | 0.630484 | 1_4:-11084066 | None:intergenic |
| AATAGAACTCAGTGCTTGAG+GGG | 0.630771 | 1_4:-11088746 | None:intergenic |
| ATTTGCAGGTGAAAATGTTG+CGG | 0.633777 | 1_4:+11082094 | Msa0149980:intron |
| TGATAATCAACAAACTCGCG+AGG | 0.638932 | 1_4:+11082619 | Msa0149980:CDS |
| TGATGAGCGTTATAACTTGG+GGG | 0.639014 | 1_4:+11083442 | Msa0149980:CDS |
| TACTCACCGAGTCAACCAGA+AGG | 0.640440 | 1_4:-11086701 | None:intergenic |
| AACCTATGGGTACCAGTAGG+TGG | 0.640501 | 1_4:-11082938 | None:intergenic |
| AAGTTAGGCTCAGTGAAGTG+CGG | 0.643977 | 1_4:-11088721 | None:intergenic |
| AGGGGCAGCCAAAAGCGCTG+AGG | 0.644717 | 1_4:-11086681 | None:intergenic |
| GCATGTCCTTCAATATAGCA+AGG | 0.645616 | 1_4:+11078308 | Msa0149980:CDS |
| CTCACCGAGTCAACCAGAAG+GGG | 0.648465 | 1_4:-11086699 | None:intergenic |
| GCAGATTCAGGACGTAATCG+AGG | 0.649804 | 1_4:-11082383 | None:intergenic |
| TCTATTCATCAAGTATAGCA+CGG | 0.650831 | 1_4:-11088795 | None:intergenic |
| GATGAGCGTTATAACTTGGG+GGG | 0.652204 | 1_4:+11083443 | Msa0149980:CDS |
| TCCCTTCAGATGGTATACAG+TGG | 0.657444 | 1_4:+11084698 | Msa0149980:CDS |
| AAATTGGACGGGTGAGAGTG+TGG | 0.665675 | 1_4:-11077041 | None:intergenic |
| TTGGACGGGTGAGAGTGTGG+TGG | 0.666528 | 1_4:-11077038 | None:intergenic |
| GTCAACCTATGGGTACCAGT+AGG | 0.678788 | 1_4:-11082941 | None:intergenic |
| ATAGAACTCAGTGCTTGAGG+GGG | 0.685115 | 1_4:-11088745 | None:intergenic |
| TCTGAATCTAAGCCTGCTGG+AGG | 0.694325 | 1_4:+11084538 | Msa0149980:CDS |
| GATAATCAACAAACTCGCGA+GGG | 0.694963 | 1_4:+11082620 | Msa0149980:CDS |
| AACCACCTACTGGTACCCAT+AGG | 0.703412 | 1_4:+11082936 | Msa0149980:CDS |
| GGGCAGCCAAAAGCGCTGAG+GGG | 0.710143 | 1_4:-11086679 | None:intergenic |
| AGACCAGCTCAGCAACCGTG+AGG | 0.718063 | 1_4:+11082137 | Msa0149980:CDS |
| GATTCTTGGAGAAAATACGG+AGG | 0.756264 | 1_4:+11082979 | Msa0149980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTATTTTTTAAATT+TGG | + | chr1_4:11087155-11087174 | Msa0149980:intron | 0.0% |
| !! | ATTAGAAATAATAATATTAG+AGG | + | chr1_4:11077731-11077750 | Msa0149980:intron | 10.0% |
| !!! | TTATATTTGTTTTACAAATT+AGG | + | chr1_4:11078280-11078299 | Msa0149980:intron | 10.0% |
| !! | TATACAGTAATAATAAAAAA+GGG | - | chr1_4:11079266-11079285 | None:intergenic | 10.0% |
| !! | TTATACAGTAATAATAAAAA+AGG | - | chr1_4:11079267-11079286 | None:intergenic | 10.0% |
| !! | TATTATTACTGTATAAAAAT+AGG | + | chr1_4:11079271-11079290 | Msa0149980:intron | 10.0% |
| !! | TATACAGTAATAATAAAAAA+GGG | - | chr1_4:11079266-11079285 | None:intergenic | 10.0% |
| !! | TTATACAGTAATAATAAAAA+AGG | - | chr1_4:11079267-11079286 | None:intergenic | 10.0% |
| !! | ATTATTACTGTATAAAAAAT+AGG | + | chr1_4:11079420-11079439 | Msa0149980:intron | 10.0% |
| !! | AAAAAAAAATTAATTTAGTG+GGG | - | chr1_4:11079558-11079577 | None:intergenic | 10.0% |
| !! | CAAAAAAAAATTAATTTAGT+GGG | - | chr1_4:11079559-11079578 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAATTAATTTAG+TGG | - | chr1_4:11079560-11079579 | None:intergenic | 10.0% |
| !!! | TGTAGAAAAATATAATTTTA+GGG | - | chr1_4:11080889-11080908 | None:intergenic | 10.0% |
| !!! | ATGTAGAAAAATATAATTTT+AGG | - | chr1_4:11080890-11080909 | None:intergenic | 10.0% |
| !!! | TCTAATTATTTTAGTTTTTT+GGG | + | chr1_4:11085936-11085955 | Msa0149980:intron | 10.0% |
| !!! | AGATAGTTTAAATATTTTTA+TGG | + | chr1_4:11086329-11086348 | Msa0149980:intron | 10.0% |
| !! | AAACTATAATCTAAATCATA+TGG | - | chr1_4:11077347-11077366 | None:intergenic | 15.0% |
| !! | AAGTCAATTATATGTAAAAA+AGG | + | chr1_4:11079139-11079158 | Msa0149980:intron | 15.0% |
| !! | AAAAATAGGATATGTAAAAA+AGG | + | chr1_4:11079285-11079304 | Msa0149980:intron | 15.0% |
| !!! | TTAATTTTTTTTTGTCCATA+TGG | + | chr1_4:11079565-11079584 | Msa0149980:intron | 15.0% |
| !!! | TACATTTTAGTTCAAAATTT+TGG | - | chr1_4:11079796-11079815 | None:intergenic | 15.0% |
| !!! | TTGTTTTACATAAATAGATA+TGG | + | chr1_4:11080459-11080478 | Msa0149980:intron | 15.0% |
| !! | ATAAAATAGAAAATACTTCT+AGG | + | chr1_4:11081678-11081697 | Msa0149980:intron | 15.0% |
| !! | TAAAAAAATGTCAAAAATAC+AGG | - | chr1_4:11082033-11082052 | None:intergenic | 15.0% |
| !!! | TATTTATTTATACTTTTCTC+TGG | + | chr1_4:11082281-11082300 | Msa0149980:intron | 15.0% |
| !!! | TGTTATGTATTCTATTTTAT+AGG | + | chr1_4:11082535-11082554 | Msa0149980:intron | 15.0% |
| !!! | ATTGAATCTCTAAATAATTT+TGG | + | chr1_4:11082848-11082867 | Msa0149980:intron | 15.0% |
| !! | AATATGCTTGTTTAATATAT+AGG | + | chr1_4:11084213-11084232 | Msa0149980:intron | 15.0% |
| !!! | CTCTAATTATTTTAGTTTTT+TGG | + | chr1_4:11085935-11085954 | Msa0149980:intron | 15.0% |
| !!! | CTAATTATTTTAGTTTTTTG+GGG | + | chr1_4:11085937-11085956 | Msa0149980:intron | 15.0% |
| !!! | TAACAAAGATATTAGAATTT+TGG | - | chr1_4:11086105-11086124 | None:intergenic | 15.0% |
| !! | AAAATTCTAATATCTTTGTT+AGG | + | chr1_4:11086104-11086123 | Msa0149980:intron | 15.0% |
| !!! | ACTGAAAAAAAATATCATTT+TGG | + | chr1_4:11086231-11086250 | Msa0149980:intron | 15.0% |
| !! | TCATTGAATAGATAAATTTA+TGG | + | chr1_4:11086287-11086306 | Msa0149980:intron | 15.0% |
| !!! | AATATGGGAATATTTTTAAT+TGG | - | chr1_4:11086858-11086877 | None:intergenic | 15.0% |
| !! | CTTAAAAGAAAAAGTAATAT+GGG | - | chr1_4:11086873-11086892 | None:intergenic | 15.0% |
| !! | TCTTAAAAGAAAAAGTAATA+TGG | - | chr1_4:11086874-11086893 | None:intergenic | 15.0% |
| !! | AGAAATGAAGAAATAATATT+GGG | - | chr1_4:11086912-11086931 | None:intergenic | 15.0% |
| !! | AAGAAATGAAGAAATAATAT+TGG | - | chr1_4:11086913-11086932 | None:intergenic | 15.0% |
| !!! | TTATTTTTTAAATTTGGAGA+AGG | + | chr1_4:11087161-11087180 | Msa0149980:intron | 15.0% |
| !! | CAAAAAATAAAAATCATAAC+AGG | - | chr1_4:11088497-11088516 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTGTGACAT+TGG | + | chr1_4:11088954-11088973 | Msa0149980:three_prime_UTR | 15.0% |
| !!! | TAGTTTTTCAAATTGTTATG+AGG | + | chr1_4:11077361-11077380 | Msa0149980:intron | 20.0% |
| !! | ACTGGTAAAAATTTGATAAA+TGG | + | chr1_4:11077450-11077469 | Msa0149980:intron | 20.0% |
| !!! | TTAATTTGCTAATTTGCTTT+TGG | + | chr1_4:11077601-11077620 | Msa0149980:intron | 20.0% |
| !!! | CATGTTTTTATGTAAACAAA+TGG | + | chr1_4:11078031-11078050 | Msa0149980:intron | 20.0% |
| !!! | TTTTTTTATTCATCGAAGTT+TGG | + | chr1_4:11078102-11078121 | Msa0149980:intron | 20.0% |
| !!! | TTTTTTATTCATCGAAGTTT+GGG | + | chr1_4:11078103-11078122 | Msa0149980:intron | 20.0% |
| !!! | TATTTGTTTTACAAATTAGG+TGG | + | chr1_4:11078283-11078302 | Msa0149980:intron | 20.0% |
| !!! | ATTTGTTTTACAAATTAGGT+GGG | + | chr1_4:11078284-11078303 | Msa0149980:intron | 20.0% |
| !! | ATTTGCTTATTGTATATTCA+TGG | + | chr1_4:11078681-11078700 | Msa0149980:intron | 20.0% |
| !!! | GGTATATGAGTTTTAAATTA+AGG | + | chr1_4:11078852-11078871 | Msa0149980:intron | 20.0% |
| !! | TTCTATTGCAAAAATTAAGT+GGG | - | chr1_4:11079503-11079522 | None:intergenic | 20.0% |
| !! | ATTCTATTGCAAAAATTAAG+TGG | - | chr1_4:11079504-11079523 | None:intergenic | 20.0% |
| !!! | TTAGTTCAAAATTTTGGTTT+TGG | - | chr1_4:11079790-11079809 | None:intergenic | 20.0% |
| !! | ATTTAAAGATACATCATATG+TGG | - | chr1_4:11080103-11080122 | None:intergenic | 20.0% |
| !! | TGCTAAGATTAATCAATAAA+TGG | - | chr1_4:11080225-11080244 | None:intergenic | 20.0% |
| !! | ACATAAATAGATATGGTTAA+TGG | + | chr1_4:11080466-11080485 | Msa0149980:intron | 20.0% |
| !! | GTGAATTGTTATCAAAATAA+TGG | + | chr1_4:11080532-11080551 | Msa0149980:intron | 20.0% |
| !! | TTGTTATCAAAATAATGGTT+CGG | + | chr1_4:11080537-11080556 | Msa0149980:intron | 20.0% |
| !! | AGTATATTTATATAGTGCAT+GGG | - | chr1_4:11080788-11080807 | None:intergenic | 20.0% |
| !!! | ATGTTTAGTTCAATATTTGA+GGG | - | chr1_4:11081228-11081247 | None:intergenic | 20.0% |
| !!! | TATGTTTAGTTCAATATTTG+AGG | - | chr1_4:11081229-11081248 | None:intergenic | 20.0% |
| !! | CATAATCAAGAAAATGTAAA+AGG | + | chr1_4:11081245-11081264 | Msa0149980:intron | 20.0% |
| !! | AAATCACATTTACAATTGTA+GGG | - | chr1_4:11081547-11081566 | None:intergenic | 20.0% |
| !! | AAAATCACATTTACAATTGT+AGG | - | chr1_4:11081548-11081567 | None:intergenic | 20.0% |
| !!! | TACAATTGTAAATGTGATTT+TGG | + | chr1_4:11081547-11081566 | Msa0149980:intron | 20.0% |
| !!! | ATAATCATTACTAACTTGTT+AGG | - | chr1_4:11081861-11081880 | None:intergenic | 20.0% |
| !! | TAATTATGTCAATTTCTCAA+AGG | + | chr1_4:11081883-11081902 | Msa0149980:intron | 20.0% |
| !!! | CGAAATTCTTTTATTTACAA+TGG | - | chr1_4:11082060-11082079 | None:intergenic | 20.0% |
| !! | ATAAAAGAATTTCGATAAGT+TGG | + | chr1_4:11082066-11082085 | Msa0149980:intron | 20.0% |
| !! | ATTAAACTTACGATCATAAA+TGG | - | chr1_4:11082749-11082768 | None:intergenic | 20.0% |
| !! | ATAAAAGATAATTGCATAAG+TGG | - | chr1_4:11082772-11082791 | None:intergenic | 20.0% |
| !! | TATTAAACCAAATTAAGGAA+GGG | - | chr1_4:11083317-11083336 | None:intergenic | 20.0% |
| !! | TTATTAAACCAAATTAAGGA+AGG | - | chr1_4:11083318-11083337 | None:intergenic | 20.0% |
| !! | CACTTTATTAAACCAAATTA+AGG | - | chr1_4:11083322-11083341 | None:intergenic | 20.0% |
| !! | TCATCTTATGTCAATAAAAT+AGG | + | chr1_4:11083357-11083376 | Msa0149980:intron | 20.0% |
| !! | TTTGTAGAAGTAATCTAATT+TGG | + | chr1_4:11083782-11083801 | Msa0149980:intron | 20.0% |
| !! | ATGCAAGATGTTAAATATAT+TGG | - | chr1_4:11083844-11083863 | None:intergenic | 20.0% |
| !!! | AGCATATTAAAAAAGTACTA+AGG | - | chr1_4:11083997-11084016 | None:intergenic | 20.0% |
| !!! | TTAACTATTGAAAGTACTTT+GGG | + | chr1_4:11084131-11084150 | Msa0149980:intron | 20.0% |
| !! | ACTATCTATAATTTCATATG+TGG | + | chr1_4:11084425-11084444 | Msa0149980:intron | 20.0% |
| !! | TGAAAATAAGATTAAAGTGA+CGG | - | chr1_4:11084598-11084617 | None:intergenic | 20.0% |
| !! | TTTATTACAAACAGAACTAT+TGG | - | chr1_4:11085850-11085869 | None:intergenic | 20.0% |
| !! | AGAATATGTGTTTATAAGTT+GGG | + | chr1_4:11086031-11086050 | Msa0149980:intron | 20.0% |
| !!! | AAAAAAAATATCATTTTGGC+AGG | + | chr1_4:11086235-11086254 | Msa0149980:intron | 20.0% |
| !! | AAACAATAGAATATTATTGC+TGG | - | chr1_4:11086468-11086487 | None:intergenic | 20.0% |
| !!! | CTAACTTTGAAGATAATTTT+GGG | - | chr1_4:11087929-11087948 | None:intergenic | 20.0% |
| !! | CAAAATTATCTTCAAAGTTA+GGG | + | chr1_4:11087928-11087947 | Msa0149980:intron | 20.0% |
| !! | ATATACATATCATATCATTC+TGG | - | chr1_4:11088246-11088265 | None:intergenic | 20.0% |
| !!! | TTTTTTTACTGATTAAGCTA+AGG | + | chr1_4:11088269-11088288 | Msa0149980:intron | 20.0% |
| !! | ATGTTCTTAGATATACTAAA+TGG | + | chr1_4:11088298-11088317 | Msa0149980:intron | 20.0% |
| !! | CTAACATATCAAACAATATA+AGG | + | chr1_4:11088388-11088407 | Msa0149980:intron | 20.0% |
| !! | TTAAATGTGCAAAATACATT+GGG | - | chr1_4:11088541-11088560 | None:intergenic | 20.0% |
| !! | ATTAAATGTGCAAAATACAT+TGG | - | chr1_4:11088542-11088561 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTGTTTTCTTT+GGG | + | chr1_4:11088594-11088613 | Msa0149980:intron | 20.0% |
| !! | TCTCTTGTAAGATATATATT+TGG | - | chr1_4:11088825-11088844 | None:intergenic | 20.0% |
| !! | AATATATATCTTACAAGAGA+TGG | + | chr1_4:11088825-11088844 | Msa0149980:three_prime_UTR | 20.0% |
| !! | AATGTGTTGTAAGATTTTCT+TGG | + | chr1_4:11077569-11077588 | Msa0149980:intron | 25.0% |
| ! | AAGTTGTGATAATATCTCTT+TGG | + | chr1_4:11077655-11077674 | Msa0149980:intron | 25.0% |
| ! | TAATAATATTAGAGGAGAGT+TGG | + | chr1_4:11077739-11077758 | Msa0149980:intron | 25.0% |
| !! | CTTTCTCTTATAGTTTTTCT+AGG | - | chr1_4:11077879-11077898 | None:intergenic | 25.0% |
| ! | AGATATAGACATTAATGAGT+TGG | + | chr1_4:11077897-11077916 | Msa0149980:intron | 25.0% |
| ! | AAAAATTAAAACCAGAGTTC+AGG | - | chr1_4:11078085-11078104 | None:intergenic | 25.0% |
| !! | AACCAGTAATAGTAAGATTT+TGG | + | chr1_4:11078208-11078227 | Msa0149980:intron | 25.0% |
| !! | ACCAGTAATAGTAAGATTTT+GGG | + | chr1_4:11078209-11078228 | Msa0149980:intron | 25.0% |
| ! | GTACCTTAACAATTTCATTT+GGG | - | chr1_4:11078389-11078408 | None:intergenic | 25.0% |
| ! | AGTACCTTAACAATTTCATT+TGG | - | chr1_4:11078390-11078409 | None:intergenic | 25.0% |
| !!! | GTTGATGGAAATATTTTATG+TGG | + | chr1_4:11078548-11078567 | Msa0149980:CDS | 25.0% |
| ! | TCATCAATCAAATGTACATA+TGG | - | chr1_4:11078813-11078832 | None:intergenic | 25.0% |
| !! | TGATGATGAATTGTAAATGT+TGG | + | chr1_4:11078830-11078849 | Msa0149980:intron | 25.0% |
| ! | GATGATGAATTGTAAATGTT+GGG | + | chr1_4:11078831-11078850 | Msa0149980:intron | 25.0% |
| ! | TAAATTCTGTAGATTTCTCT+TGG | - | chr1_4:11078972-11078991 | None:intergenic | 25.0% |
| ! | ATGCTGCATACAAATAAAAA+AGG | + | chr1_4:11079163-11079182 | Msa0149980:intron | 25.0% |
| ! | TGCTGCATACAAATAAAAAA+GGG | + | chr1_4:11079164-11079183 | Msa0149980:intron | 25.0% |
| ! | CATACAAATAAAAAAGGGAA+TGG | + | chr1_4:11079169-11079188 | Msa0149980:intron | 25.0% |
| !! | ATATAGAAAGCTTTGTGTAA+TGG | + | chr1_4:11079210-11079229 | Msa0149980:intron | 25.0% |
| ! | ATGCTGCATACAAATAAAAA+AGG | + | chr1_4:11079163-11079182 | Msa0149980:intron | 25.0% |
| ! | TGCTGCATACAAATAAAAAA+GGG | + | chr1_4:11079164-11079183 | Msa0149980:intron | 25.0% |
| ! | CATACAAATAAAAAAGGGAA+TGG | + | chr1_4:11079169-11079188 | Msa0149980:intron | 25.0% |
| ! | GGACCTATTTGTAAAATATT+GGG | + | chr1_4:11079467-11079486 | Msa0149980:intron | 25.0% |
| ! | GACCTATTTGTAAAATATTG+GGG | + | chr1_4:11079468-11079487 | Msa0149980:intron | 25.0% |
| ! | ACCTATTTGTAAAATATTGG+GGG | + | chr1_4:11079469-11079488 | Msa0149980:intron | 25.0% |
| ! | TCTATTGCAAAAATTAAGTG+GGG | - | chr1_4:11079502-11079521 | None:intergenic | 25.0% |
| ! | GGTTAATTTCAAACCTTAAA+CGG | - | chr1_4:11079704-11079723 | None:intergenic | 25.0% |
| !!! | TGTTATTTAGAGCATTGAAT+TGG | - | chr1_4:11079889-11079908 | None:intergenic | 25.0% |
| ! | TCTAAAAAAACAAACCAACT+AGG | + | chr1_4:11079925-11079944 | Msa0149980:intron | 25.0% |
| !!! | TGGTTATGCTTATTTTTCTT+AGG | - | chr1_4:11079970-11079989 | None:intergenic | 25.0% |
| ! | TGATGTATCTTTAAATTTGC+TGG | + | chr1_4:11080107-11080126 | Msa0149980:intron | 25.0% |
| ! | AATAGATATGGTTAATGGTT+CGG | + | chr1_4:11080471-11080490 | Msa0149980:intron | 25.0% |
| !!! | TGGTTCAGTTAATTTTGATA+CGG | + | chr1_4:11080577-11080596 | Msa0149980:intron | 25.0% |
| ! | GAGTATATTTATATAGTGCA+TGG | - | chr1_4:11080789-11080808 | None:intergenic | 25.0% |
| ! | CTATCCTAATTTCACTATAA+CGG | - | chr1_4:11080947-11080966 | None:intergenic | 25.0% |
| ! | TTTCCAAGATCTATGAATAT+TGG | + | chr1_4:11081125-11081144 | Msa0149980:intron | 25.0% |
| ! | GCAAAATAAGAGAAATGATA+AGG | + | chr1_4:11081161-11081180 | Msa0149980:intron | 25.0% |
| !! | TGTTTAGTTCAATATTTGAG+GGG | - | chr1_4:11081227-11081246 | None:intergenic | 25.0% |
| ! | TTCTTGTATCCATAATTTGA+TGG | - | chr1_4:11081302-11081321 | None:intergenic | 25.0% |
| ! | AATTATGGATACAAGAAAAC+AGG | + | chr1_4:11081305-11081324 | Msa0149980:intron | 25.0% |
| ! | ACAGATTGTATAGACTATTT+GGG | - | chr1_4:11081580-11081599 | None:intergenic | 25.0% |
| ! | AACAGATTGTATAGACTATT+TGG | - | chr1_4:11081581-11081600 | None:intergenic | 25.0% |
| ! | GAATTTGAGGATAGAATAAA+AGG | - | chr1_4:11081640-11081659 | None:intergenic | 25.0% |
| ! | AAATAGAAAATACTTCTAGG+AGG | + | chr1_4:11081681-11081700 | Msa0149980:intron | 25.0% |
| !!! | TAATGCATCTTAAAGTATTG+CGG | - | chr1_4:11082471-11082490 | None:intergenic | 25.0% |
| ! | TACATAACATCTTATAACTG+TGG | - | chr1_4:11082524-11082543 | None:intergenic | 25.0% |
| !! | TTTCTCATTTTCTATACATC+AGG | + | chr1_4:11082723-11082742 | Msa0149980:CDS | 25.0% |
| !! | AGTAGAAAGCATGTATAATT+TGG | + | chr1_4:11082892-11082911 | Msa0149980:CDS | 25.0% |
| ! | GAAAGGAAAAATTCATTGAA+AGG | - | chr1_4:11083044-11083063 | None:intergenic | 25.0% |
| !! | ATAGTCAATCACCTTTAAAA+CGG | - | chr1_4:11083067-11083086 | None:intergenic | 25.0% |
| ! | TTTATTACTATGTGCATGTT+TGG | + | chr1_4:11083179-11083198 | Msa0149980:intron | 25.0% |
| ! | CTTATGTCAATAAAATAGGA+TGG | + | chr1_4:11083361-11083380 | Msa0149980:intron | 25.0% |
| !! | TCAAATAAGCAGGATATTTT+TGG | - | chr1_4:11083559-11083578 | None:intergenic | 25.0% |
| ! | ACATATGACTAAGAAATTTG+AGG | + | chr1_4:11083667-11083686 | Msa0149980:intron | 25.0% |
| ! | AGAAGACAAAAAACTTCATT+TGG | - | chr1_4:11083711-11083730 | None:intergenic | 25.0% |
| !!! | AAAAAGTACTAAGGATCATA+TGG | - | chr1_4:11083988-11084007 | None:intergenic | 25.0% |
| ! | TATCAGTTCAAATATCATGA+AGG | + | chr1_4:11084087-11084106 | Msa0149980:CDS | 25.0% |
| !!! | GTTAACTATTGAAAGTACTT+TGG | + | chr1_4:11084130-11084149 | Msa0149980:intron | 25.0% |
| ! | GGAACTACATTATTAAAAGA+CGG | - | chr1_4:11084184-11084203 | None:intergenic | 25.0% |
| ! | AACAAGCATATTCAATTCTA+TGG | - | chr1_4:11084205-11084224 | None:intergenic | 25.0% |
| ! | TTGTTTAATATATAGGTTGC+TGG | + | chr1_4:11084220-11084239 | Msa0149980:intron | 25.0% |
| !! | AATTGTCTTTTATTGCATTC+AGG | + | chr1_4:11084657-11084676 | Msa0149980:intron | 25.0% |
| ! | GTAAATTAATACCAGTATGA+GGG | - | chr1_4:11084759-11084778 | None:intergenic | 25.0% |
| ! | TGTAAATTAATACCAGTATG+AGG | - | chr1_4:11084760-11084779 | None:intergenic | 25.0% |
| !!! | AATCAGCTTACTGTTTTATT+GGG | - | chr1_4:11084810-11084829 | None:intergenic | 25.0% |
| ! | ACATAATCCTAAAACTTCAA+AGG | + | chr1_4:11084998-11085017 | Msa0149980:intron | 25.0% |
| ! | TCAGTAATTACAACTCAATT+TGG | - | chr1_4:11085215-11085234 | None:intergenic | 25.0% |
| !! | TAATTACTGAGCAAAACTTT+TGG | + | chr1_4:11085225-11085244 | Msa0149980:intron | 25.0% |
| !!! | AAACCATTGGTTCTAATATT+TGG | - | chr1_4:11085375-11085394 | None:intergenic | 25.0% |
| !!! | ATGTTATTTCGTATTTAGGT+GGG | - | chr1_4:11085458-11085477 | None:intergenic | 25.0% |
| !!! | TATGTTATTTCGTATTTAGG+TGG | - | chr1_4:11085459-11085478 | None:intergenic | 25.0% |
| !!! | TGGTATGTTATTTCGTATTT+AGG | - | chr1_4:11085462-11085481 | None:intergenic | 25.0% |
| ! | AGATAATATACCAAAAGTTG+TGG | - | chr1_4:11085489-11085508 | None:intergenic | 25.0% |
| ! | TTTACAAAGTTAGATTAGTG+CGG | - | chr1_4:11085621-11085640 | None:intergenic | 25.0% |
| ! | GAAAACACGTAAAAAGATAA+TGG | - | chr1_4:11085806-11085825 | None:intergenic | 25.0% |
| !!! | AATTTAGGTTGAATTATTGG+AGG | - | chr1_4:11085971-11085990 | None:intergenic | 25.0% |
| !!! | GACAATTTAGGTTGAATTAT+TGG | - | chr1_4:11085974-11085993 | None:intergenic | 25.0% |
| ! | TCTTTAACAAAGGACAATTT+AGG | - | chr1_4:11085986-11086005 | None:intergenic | 25.0% |
| ! | AATGTATGACTCTTTAACAA+AGG | - | chr1_4:11085996-11086015 | None:intergenic | 25.0% |
| ! | TTTGTTAAAGAGTCATACAT+TGG | + | chr1_4:11085995-11086014 | Msa0149980:intron | 25.0% |
| ! | CAGAATATGTGTTTATAAGT+TGG | + | chr1_4:11086030-11086049 | Msa0149980:intron | 25.0% |
| ! | TTCTAATATCTTTGTTAGGA+AGG | + | chr1_4:11086108-11086127 | Msa0149980:intron | 25.0% |
| ! | ATAAACATAGTGATGTAGTT+TGG | + | chr1_4:11086390-11086409 | Msa0149980:intron | 25.0% |
| ! | TATAGTAGTCTCAAATATCA+TGG | + | chr1_4:11086428-11086447 | Msa0149980:intron | 25.0% |
| ! | AAAAACTAGAACTTCATTAG+TGG | - | chr1_4:11086567-11086586 | None:intergenic | 25.0% |
| !! | TCGTATAAATTTTCTGTTTC+TGG | + | chr1_4:11086961-11086980 | Msa0149980:intron | 25.0% |
| !!! | CTAATTGTTTTTGTTTGATG+AGG | - | chr1_4:11087301-11087320 | None:intergenic | 25.0% |
| ! | ATCTTAAGTCAGTATTTGAA+TGG | + | chr1_4:11087396-11087415 | Msa0149980:intron | 25.0% |
| ! | AATAAAATTGCCAATGAAGT+TGG | - | chr1_4:11087703-11087722 | None:intergenic | 25.0% |
| !! | ACTTCATTGGCAATTTTATT+AGG | + | chr1_4:11087703-11087722 | Msa0149980:intron | 25.0% |
| !! | CTTCATTGGCAATTTTATTA+GGG | + | chr1_4:11087704-11087723 | Msa0149980:intron | 25.0% |
| !!! | CCTAACTTTGAAGATAATTT+TGG | - | chr1_4:11087930-11087949 | None:intergenic | 25.0% |
| ! | CCAAAATTATCTTCAAAGTT+AGG | + | chr1_4:11087927-11087946 | Msa0149980:intron | 25.0% |
| ! | AACTTCAAACAATGAATTTG+AGG | + | chr1_4:11088165-11088184 | Msa0149980:intron | 25.0% |
| ! | ACTTCAAACAATGAATTTGA+GGG | + | chr1_4:11088166-11088185 | Msa0149980:intron | 25.0% |
| !!! | CATTTCCATTTTGTTTTCTT+TGG | + | chr1_4:11088593-11088612 | Msa0149980:intron | 25.0% |
| ! | ACAACATATGATAACCATTA+GGG | - | chr1_4:11088928-11088947 | None:intergenic | 25.0% |
| ! | TACAACATATGATAACCATT+AGG | - | chr1_4:11088929-11088948 | None:intergenic | 25.0% |
| !!! | GTATTTTTATTTATCTTCCG+AGG | + | chr1_4:11089012-11089031 | Msa0149980:three_prime_UTR | 25.0% |
| AAAGTCATTGAAGTTAAGCT+TGG | + | chr1_4:11077171-11077190 | Msa0149980:intron | 30.0% | |
| TTGAAGTTAACTATGTGTGT+CGG | + | chr1_4:11077479-11077498 | Msa0149980:intron | 30.0% | |
| !!! | GACTTGTTGATTTTATAGCA+AGG | + | chr1_4:11077805-11077824 | Msa0149980:intron | 30.0% |
| ! | GTTGTTGATATGTTTTTCGT+TGG | + | chr1_4:11078002-11078021 | Msa0149980:intron | 30.0% |
| ACCCAAAATCTTACTATTAC+TGG | - | chr1_4:11078213-11078232 | None:intergenic | 30.0% | |
| ! | TTATCTCCTTGCTATATTGA+AGG | - | chr1_4:11078317-11078336 | None:intergenic | 30.0% |
| TCATTTGGGTCTTCAATAAT+CGG | - | chr1_4:11078375-11078394 | None:intergenic | 30.0% | |
| AGACCCAAATGAAATTGTTA+AGG | + | chr1_4:11078383-11078402 | Msa0149980:CDS | 30.0% | |
| !! | ACACTTGTTGTAGAAAAATG+AGG | + | chr1_4:11078497-11078516 | Msa0149980:intron | 30.0% |
| !! | TTTTCCACAAGTTTTGTAGA+TGG | + | chr1_4:11078643-11078662 | Msa0149980:intron | 30.0% |
| ! | ATGAATTGTTTCTTGTGTAC+TGG | - | chr1_4:11078742-11078761 | None:intergenic | 30.0% |
| AGTACACAAGAAACAATTCA+TGG | + | chr1_4:11078741-11078760 | Msa0149980:CDS | 30.0% | |
| GAATGATCTTGTTAACATAC+AGG | + | chr1_4:11078782-11078801 | Msa0149980:CDS | 30.0% | |
| ATCTTGTTAACATACAGGTT+TGG | + | chr1_4:11078787-11078806 | Msa0149980:intron | 30.0% | |
| ACAAATAAAAAAGGGAATGG+AGG | + | chr1_4:11079172-11079191 | Msa0149980:intron | 30.0% | |
| ACAAATAAAAAAGGGAATGG+AGG | + | chr1_4:11079172-11079191 | Msa0149980:intron | 30.0% | |
| ATAGAAAGCTTTACGTGTAA+TGG | + | chr1_4:11079358-11079377 | Msa0149980:intron | 30.0% | |
| CGGACCTATTTGTAAAATAT+TGG | + | chr1_4:11079466-11079485 | Msa0149980:intron | 30.0% | |
| CTATTGCAAAAATTAAGTGG+GGG | - | chr1_4:11079501-11079520 | None:intergenic | 30.0% | |
| AATATCGATATTGCTAGGTA+GGG | + | chr1_4:11079603-11079622 | Msa0149980:intron | 30.0% | |
| ATTTCAAACCTTAAACGGTT+CGG | - | chr1_4:11079699-11079718 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTTTGGTTCAGTT+CGG | - | chr1_4:11079780-11079799 | None:intergenic | 30.0% |
| TAAGCATAACCATAACAGTA+TGG | + | chr1_4:11079978-11079997 | Msa0149980:intron | 30.0% | |
| CCTTATAAACCATACTGTTA+TGG | - | chr1_4:11079990-11080009 | None:intergenic | 30.0% | |
| CCATAACAGTATGGTTTATA+AGG | + | chr1_4:11079987-11080006 | Msa0149980:intron | 30.0% | |
| TGGTTTATAAGGAGAATTTG+AGG | + | chr1_4:11079998-11080017 | Msa0149980:intron | 30.0% | |
| ! | TACAATACTAGTTTCCTCAA+AGG | - | chr1_4:11080078-11080097 | None:intergenic | 30.0% |
| TTTGAGGAAACTAGTATTGT+AGG | + | chr1_4:11080077-11080096 | Msa0149980:intron | 30.0% | |
| AACTAATAAGCTTCTTGATC+AGG | - | chr1_4:11080281-11080300 | None:intergenic | 30.0% | |
| AACTGAACCGTTAATAACTT+CGG | - | chr1_4:11080506-11080525 | None:intergenic | 30.0% | |
| AAGTTATTAACGGTTCAGTT+CGG | + | chr1_4:11080506-11080525 | Msa0149980:intron | 30.0% | |
| !! | CAGTTAATTTTGATACGGTT+CGG | + | chr1_4:11080582-11080601 | Msa0149980:intron | 30.0% |
| AACCAAAAACCAATTTGAAC+CGG | - | chr1_4:11080617-11080636 | None:intergenic | 30.0% | |
| TGATAAAACTGAAGAATCTG+CGG | - | chr1_4:11080856-11080875 | None:intergenic | 30.0% | |
| ATTGCCGTTATAGTGAAATT+AGG | + | chr1_4:11080940-11080959 | Msa0149980:intron | 30.0% | |
| !!! | GTTAGAGAGCATCATATTTT+TGG | + | chr1_4:11081044-11081063 | Msa0149980:intron | 30.0% |
| CATCCAATATTCATAGATCT+TGG | - | chr1_4:11081131-11081150 | None:intergenic | 30.0% | |
| AGTTAAGGATTCATGATTCA+AGG | - | chr1_4:11081387-11081406 | None:intergenic | 30.0% | |
| GCTTCTAACTTAAATCATGA+TGG | + | chr1_4:11081480-11081499 | Msa0149980:intron | 30.0% | |
| ! | ACTACGGAGTAAACTTTTAA+AGG | - | chr1_4:11081524-11081543 | None:intergenic | 30.0% |
| ATTTACAATTGTAGGGACTA+CGG | - | chr1_4:11081540-11081559 | None:intergenic | 30.0% | |
| ATTGTATAGACTATTTGGGA+TGG | - | chr1_4:11081576-11081595 | None:intergenic | 30.0% | |
| ATAAATTGTAGACTGTAGAG+TGG | - | chr1_4:11081746-11081765 | None:intergenic | 30.0% | |
| AAGGATGATGTAAACAACAA+TGG | - | chr1_4:11081838-11081857 | None:intergenic | 30.0% | |
| !! | TCATTACTAACTTGTTAGGA+AGG | - | chr1_4:11081857-11081876 | None:intergenic | 30.0% |
| TATGTCAATTTCTCAAAGGT+TGG | + | chr1_4:11081887-11081906 | Msa0149980:intron | 30.0% | |
| ! | TAATTTTCATGCATACCTCA+CGG | - | chr1_4:11082155-11082174 | None:intergenic | 30.0% |
| !! | TCAGTTAGAAAATGGATTAG+TGG | + | chr1_4:11082331-11082350 | Msa0149980:intron | 30.0% |
| GGATATACTTTGATAAAGTC+AGG | - | chr1_4:11082443-11082462 | None:intergenic | 30.0% | |
| !! | TCTTAAAGTATTGCGGAATT+TGG | - | chr1_4:11082464-11082483 | None:intergenic | 30.0% |
| ! | TGTATTCTATTTTATAGGCC+TGG | + | chr1_4:11082540-11082559 | Msa0149980:intron | 30.0% |
| ! | GTATTCTATTTTATAGGCCT+GGG | + | chr1_4:11082541-11082560 | Msa0149980:intron | 30.0% |
| TTATCACACTGAATCCAAAA+TGG | - | chr1_4:11082605-11082624 | None:intergenic | 30.0% | |
| TCATTGAAAGGAAGAAACAA+TGG | - | chr1_4:11083032-11083051 | None:intergenic | 30.0% | |
| ! | TTTTTCCTTTCCCGTTTTAA+AGG | + | chr1_4:11083053-11083072 | Msa0149980:intron | 30.0% |
| !! | TAGTCAATCACCTTTAAAAC+GGG | - | chr1_4:11083066-11083085 | None:intergenic | 30.0% |
| TGATCATGTTGAAATGTCTT+AGG | + | chr1_4:11083086-11083105 | Msa0149980:intron | 30.0% | |
| CAATTCAAGATCAAATAAGC+AGG | - | chr1_4:11083569-11083588 | None:intergenic | 30.0% | |
| TATGATCAAGCTCATATAAG+CGG | - | chr1_4:11084069-11084088 | None:intergenic | 30.0% | |
| AAGATACAAACAGTCTTGAT+AGG | + | chr1_4:11084302-11084321 | Msa0149980:CDS | 30.0% | |
| CAACAGTTATTTGATTCAGT+TGG | + | chr1_4:11084331-11084350 | Msa0149980:CDS | 30.0% | |
| ! | ATCCATATGTTTTACAGCAA+TGG | + | chr1_4:11084491-11084510 | Msa0149980:intron | 30.0% |
| ! | TCCATATGTTTTACAGCAAT+GGG | + | chr1_4:11084492-11084511 | Msa0149980:intron | 30.0% |
| GAAGGCTTAATTGAGTTATT+GGG | + | chr1_4:11084514-11084533 | Msa0149980:CDS | 30.0% | |
| TTTCAAAAAATCCCTTCAGA+TGG | + | chr1_4:11084688-11084707 | Msa0149980:CDS | 30.0% | |
| !! | ATCAGCTTACTGTTTTATTG+GGG | - | chr1_4:11084809-11084828 | None:intergenic | 30.0% |
| ! | CAATCAGCTTACTGTTTTAT+TGG | - | chr1_4:11084811-11084830 | None:intergenic | 30.0% |
| TTAGTTGAATTCAGCATAGA+AGG | - | chr1_4:11084864-11084883 | None:intergenic | 30.0% | |
| ! | TTGAATGCCATCTTCATTTT+TGG | - | chr1_4:11084947-11084966 | None:intergenic | 30.0% |
| GATTATGTTGTTCATCTTGA+TGG | - | chr1_4:11084986-11085005 | None:intergenic | 30.0% | |
| AAAGGAAACAGACATATTGT+TGG | - | chr1_4:11085058-11085077 | None:intergenic | 30.0% | |
| ACAATATGTCTGTTTCCTTT+AGG | + | chr1_4:11085058-11085077 | Msa0149980:intron | 30.0% | |
| AACAAAATTGTATGGCCTAA+AGG | - | chr1_4:11085076-11085095 | None:intergenic | 30.0% | |
| ! | TTTAGGCCATACAATTTTGT+TGG | + | chr1_4:11085075-11085094 | Msa0149980:intron | 30.0% |
| TACACTCCAACAAAATTGTA+TGG | - | chr1_4:11085084-11085103 | None:intergenic | 30.0% | |
| ! | ATACAATTTTGTTGGAGTGT+AGG | + | chr1_4:11085083-11085102 | Msa0149980:intron | 30.0% |
| ACAACTAGATCGATGTATAA+TGG | + | chr1_4:11085109-11085128 | Msa0149980:intron | 30.0% | |
| TTGTAAGAAATCGTCAGTAA+AGG | + | chr1_4:11085296-11085315 | Msa0149980:intron | 30.0% | |
| ATCCTGTTCTTTCTATCTTA+GGG | - | chr1_4:11085345-11085364 | None:intergenic | 30.0% | |
| AATCCTGTTCTTTCTATCTT+AGG | - | chr1_4:11085346-11085365 | None:intergenic | 30.0% | |
| TCTCCAAATATTAGAACCAA+TGG | + | chr1_4:11085369-11085388 | Msa0149980:intron | 30.0% | |
| !!! | ATGTCTCTTTTTGAAACCAT+TGG | - | chr1_4:11085388-11085407 | None:intergenic | 30.0% |
| ! | TCTCCACAACACATTTTAAA+CGG | + | chr1_4:11085589-11085608 | Msa0149980:intron | 30.0% |
| ! | TTTCCGTTTAAAATGTGTTG+TGG | - | chr1_4:11085595-11085614 | None:intergenic | 30.0% |
| !!! | CGATCTCTTATTCTTGTTTT+AGG | - | chr1_4:11085684-11085703 | None:intergenic | 30.0% |
| !! | TAAAAAGATAATGGACCAAC+TGG | - | chr1_4:11085797-11085816 | None:intergenic | 30.0% |
| !!! | CGCTGCTATTTTTTTTACAA+GGG | + | chr1_4:11085896-11085915 | Msa0149980:intron | 30.0% |
| GTCATACATTGGAAAAGATA+TGG | + | chr1_4:11086006-11086025 | Msa0149980:intron | 30.0% | |
| !!! | TTTTTTGTCCATGCAACTTT+CGG | - | chr1_4:11086166-11086185 | None:intergenic | 30.0% |
| TTCAGTTTCTATGCAAATCA+TGG | - | chr1_4:11086217-11086236 | None:intergenic | 30.0% | |
| AAGGCATAAAGAAACATATG+CGG | - | chr1_4:11086492-11086511 | None:intergenic | 30.0% | |
| TACTACAACATTAGAGATGA+AGG | - | chr1_4:11086511-11086530 | None:intergenic | 30.0% | |
| ATGTTGTAGTACTCCATTAA+TGG | + | chr1_4:11086520-11086539 | Msa0149980:intron | 30.0% | |
| ATCATATGTGCATGTCTTAA+TGG | + | chr1_4:11086778-11086797 | Msa0149980:intron | 30.0% | |
| TCATATGTGCATGTCTTAAT+GGG | + | chr1_4:11086779-11086798 | Msa0149980:intron | 30.0% | |
| CGATGAAAGAGATATTAAGA+TGG | - | chr1_4:11086806-11086825 | None:intergenic | 30.0% | |
| AACAATAGTTTCTAATGCAG+TGG | + | chr1_4:11086993-11087012 | Msa0149980:intron | 30.0% | |
| CATGACAATTTATACGCAAA+TGG | - | chr1_4:11087056-11087075 | None:intergenic | 30.0% | |
| ! | ACATTTTACAATAATCCCTG+AGG | + | chr1_4:11087218-11087237 | Msa0149980:intron | 30.0% |
| ! | CATTTTACAATAATCCCTGA+GGG | + | chr1_4:11087219-11087238 | Msa0149980:intron | 30.0% |
| ! | ATTTTACAATAATCCCTGAG+GGG | + | chr1_4:11087220-11087239 | Msa0149980:intron | 30.0% |
| !! | ATACTGACTTAAGATGACTT+GGG | - | chr1_4:11087391-11087410 | None:intergenic | 30.0% |
| !! | AATACTGACTTAAGATGACT+TGG | - | chr1_4:11087392-11087411 | None:intergenic | 30.0% |
| TTAAGAGTTATCACATCAAC+AGG | + | chr1_4:11087479-11087498 | Msa0149980:intron | 30.0% | |
| TGAAGATATTCCTTACGTTA+TGG | + | chr1_4:11087616-11087635 | Msa0149980:intron | 30.0% | |
| ! | TTTTATTAGGGAATCCATGT+AGG | + | chr1_4:11087716-11087735 | Msa0149980:intron | 30.0% |
| CATATGCCTAGTTTCTAATT+TGG | - | chr1_4:11087859-11087878 | None:intergenic | 30.0% | |
| TTGTGAAAATCTACTCTTAC+TGG | + | chr1_4:11088362-11088381 | Msa0149980:intron | 30.0% | |
| TTTGCACATTTAATACAAGC+TGG | + | chr1_4:11088548-11088567 | Msa0149980:intron | 30.0% | |
| TGTTCCCAAAGAAAACAAAA+TGG | - | chr1_4:11088601-11088620 | None:intergenic | 30.0% | |
| AACAGTTGAAGTTGCTAAAT+TGG | + | chr1_4:11088617-11088636 | Msa0149980:intron | 30.0% | |
| CAAACTTCAAGAGTTATCTT+TGG | + | chr1_4:11088687-11088706 | Msa0149980:CDS | 30.0% | |
| TCTATTCATCAAGTATAGCA+CGG | - | chr1_4:11088798-11088817 | None:intergenic | 30.0% | |
| TTTATTTATCTTCCGAGGAA+TGG | + | chr1_4:11089017-11089036 | Msa0149980:three_prime_UTR | 30.0% | |
| TAAAAATGAAGATGCAACGT+TGG | - | chr1_4:11089074-11089093 | None:intergenic | 30.0% | |
| ! | TTGAACTCTTTGCTATACTA+AGG | - | chr1_4:11089107-11089126 | None:intergenic | 30.0% |
| TAATATTAGAGGAGAGTTGG+TGG | + | chr1_4:11077742-11077761 | Msa0149980:intron | 35.0% | |
| AAACTAAGCATAGGTGGTTT+AGG | + | chr1_4:11077765-11077784 | Msa0149980:intron | 35.0% | |
| TTGCATTAAGACCGTCTTTA+CGG | + | chr1_4:11078447-11078466 | Msa0149980:intron | 35.0% | |
| ! | GACTATAAGTACCGTAAAGA+CGG | - | chr1_4:11078461-11078480 | None:intergenic | 35.0% |
| AACATGTTTGAAAGCTGCAT+GGG | + | chr1_4:11078524-11078543 | Msa0149980:CDS | 35.0% | |
| !! | TCATGGTTGCGTTTTATTAC+AGG | + | chr1_4:11078698-11078717 | Msa0149980:intron | 35.0% |
| ! | TTTCTTGTGTACTGGTAAAG+AGG | - | chr1_4:11078734-11078753 | None:intergenic | 35.0% |
| AAGGATTCTTGCAGCATATA+TGG | + | chr1_4:11078871-11078890 | Msa0149980:intron | 35.0% | |
| !! | TATCTGCTATTTCACATAGC+GGG | - | chr1_4:11079078-11079097 | None:intergenic | 35.0% |
| !! | CTATCTGCTATTTCACATAG+CGG | - | chr1_4:11079079-11079098 | None:intergenic | 35.0% |
| TGAAATAGCAGATAGTGTTG+AGG | + | chr1_4:11079084-11079103 | Msa0149980:intron | 35.0% | |
| ! | GAAATAGCAGATAGTGTTGA+GGG | + | chr1_4:11079085-11079104 | Msa0149980:intron | 35.0% |
| ! | AAATAGCAGATAGTGTTGAG+GGG | + | chr1_4:11079086-11079105 | Msa0149980:intron | 35.0% |
| GACTTATTTCAACCGTTATG+CGG | - | chr1_4:11079124-11079143 | None:intergenic | 35.0% | |
| GTCATGTTTACAGATTCTCA+GGG | + | chr1_4:11079442-11079461 | Msa0149980:intron | 35.0% | |
| ! | GCCCCCAATATTTTACAAAT+AGG | - | chr1_4:11079473-11079492 | None:intergenic | 35.0% |
| CTGACAATATCGATATTGCT+AGG | + | chr1_4:11079598-11079617 | Msa0149980:intron | 35.0% | |
| CAATATCGATATTGCTAGGT+AGG | + | chr1_4:11079602-11079621 | Msa0149980:intron | 35.0% | |
| ATATCGATATTGCTAGGTAG+GGG | + | chr1_4:11079604-11079623 | Msa0149980:intron | 35.0% | |
| !! | TCAGTTTGGTTCGGTTAATA+TGG | - | chr1_4:11079648-11079667 | None:intergenic | 35.0% |
| TTCAACACTTCAGTTTGGTT+CGG | - | chr1_4:11079657-11079676 | None:intergenic | 35.0% | |
| !! | ACCAAACTGAAGTGTTGAAA+TGG | + | chr1_4:11079658-11079677 | Msa0149980:intron | 35.0% |
| ACCATTTCAACACTTCAGTT+TGG | - | chr1_4:11079662-11079681 | None:intergenic | 35.0% | |
| !! | ACTGAAGTGTTGAAATGGTT+CGG | + | chr1_4:11079663-11079682 | Msa0149980:intron | 35.0% |
| ! | ACCATAACTTTGGTTCAGTT+CGG | - | chr1_4:11079725-11079744 | None:intergenic | 35.0% |
| GGTTAACTGAACCATAACTT+TGG | - | chr1_4:11079735-11079754 | None:intergenic | 35.0% | |
| CATTGAATTGGTACAGTCAT+TGG | - | chr1_4:11079877-11079896 | None:intergenic | 35.0% | |
| GAACATAAAAGAGTCCTTTG+AGG | + | chr1_4:11080061-11080080 | Msa0149980:intron | 35.0% | |
| GCAAATGTCTCTTAGTGAAT+CGG | + | chr1_4:11080170-11080189 | Msa0149980:intron | 35.0% | |
| !! | ATATGGTTAATGGTTCGGTT+CGG | + | chr1_4:11080476-11080495 | Msa0149980:intron | 35.0% |
| CGGTTAACCGAAGTTATTAA+CGG | + | chr1_4:11080496-11080515 | Msa0149980:intron | 35.0% | |
| !!! | AATTTTGATACGGTTCGGTT+CGG | + | chr1_4:11080587-11080606 | Msa0149980:intron | 35.0% |
| !!! | AACCGGTTCAAATTGGTTTT+TGG | + | chr1_4:11080612-11080631 | Msa0149980:intron | 35.0% |
| AGATGTTCAGCTTAGCAATA+GGG | - | chr1_4:11080652-11080671 | None:intergenic | 35.0% | |
| AAGATGTTCAGCTTAGCAAT+AGG | - | chr1_4:11080653-11080672 | None:intergenic | 35.0% | |
| AAGCTGAACATCTTCATTTG+AGG | + | chr1_4:11080659-11080678 | Msa0149980:intron | 35.0% | |
| CTTCCACATATCGAAATTTC+TGG | + | chr1_4:11080822-11080841 | Msa0149980:intron | 35.0% | |
| GATCCAGAAATTTCGATATG+TGG | - | chr1_4:11080828-11080847 | None:intergenic | 35.0% | |
| TTTCACTATAACGGCAATAG+TGG | - | chr1_4:11080938-11080957 | None:intergenic | 35.0% | |
| GCATCCAATTCAACGAATTT+CGG | + | chr1_4:11081088-11081107 | Msa0149980:intron | 35.0% | |
| AGGAGATGCAAGAAATTGTA+TGG | + | chr1_4:11081265-11081284 | Msa0149980:intron | 35.0% | |
| ATGTGCAGACCATCAAATTA+TGG | + | chr1_4:11081290-11081309 | Msa0149980:intron | 35.0% | |
| ATAGCACTCTGTTGAAGTTA+AGG | - | chr1_4:11081402-11081421 | None:intergenic | 35.0% | |
| ! | AAATCATGATGGAGCTGAAT+TGG | + | chr1_4:11081491-11081510 | Msa0149980:intron | 35.0% |
| ! | GATGTGTTTCTACGAATTTG+AGG | - | chr1_4:11081653-11081672 | None:intergenic | 35.0% |
| TTTATGCCCAATGTTTCCTA+AGG | + | chr1_4:11081714-11081733 | Msa0149980:intron | 35.0% | |
| TTATGCCCAATGTTTCCTAA+GGG | + | chr1_4:11081715-11081734 | Msa0149980:intron | 35.0% | |
| ATTTCCCCTTAGGAAACATT+GGG | - | chr1_4:11081723-11081742 | None:intergenic | 35.0% | |
| ! | GAAAATTTTGTTCATGCTGC+AGG | + | chr1_4:11081923-11081942 | Msa0149980:intron | 35.0% |
| CTAGATATAGTGGTCAGTAA+AGG | + | chr1_4:11082005-11082024 | Msa0149980:intron | 35.0% | |
| !! | ATAAGTTGGCTTTCATTTGC+AGG | + | chr1_4:11082080-11082099 | Msa0149980:intron | 35.0% |
| ATTTGCAGGTGAAAATGTTG+CGG | + | chr1_4:11082094-11082113 | Msa0149980:intron | 35.0% | |
| TCTCAATTTCTGTCCTCTTT+CGG | + | chr1_4:11082304-11082323 | Msa0149980:intron | 35.0% | |
| !! | GTTAGAAAATGGATTAGTGG+AGG | + | chr1_4:11082334-11082353 | Msa0149980:intron | 35.0% |
| TACTTTGATAAAGTCAGGCT+TGG | - | chr1_4:11082438-11082457 | None:intergenic | 35.0% | |
| GAGGTCACAAATTACTAAAC+TGG | + | chr1_4:11082571-11082590 | Msa0149980:CDS | 35.0% | |
| !! | AAACTTGCTACAAGTTATGC+TGG | + | chr1_4:11082649-11082668 | Msa0149980:CDS | 35.0% |
| !! | AACTTGCTACAAGTTATGCT+GGG | + | chr1_4:11082650-11082669 | Msa0149980:CDS | 35.0% |
| TTTCAATTGGATGCACTTCT+GGG | - | chr1_4:11082918-11082937 | None:intergenic | 35.0% | |
| TAAAAGTCCAGTCAACCTAT+GGG | - | chr1_4:11082954-11082973 | None:intergenic | 35.0% | |
| TTAAAAGTCCAGTCAACCTA+TGG | - | chr1_4:11082955-11082974 | None:intergenic | 35.0% | |
| ! | AGGTTGACTGGACTTTTAAT+TGG | + | chr1_4:11082956-11082975 | Msa0149980:CDS | 35.0% |
| !! | GGTTGACTGGACTTTTAATT+GGG | + | chr1_4:11082957-11082976 | Msa0149980:CDS | 35.0% |
| !! | GGACTTTTAATTGGGATTCT+TGG | + | chr1_4:11082965-11082984 | Msa0149980:CDS | 35.0% |
| TGGGATTCTTGGAGAAAATA+CGG | + | chr1_4:11082976-11082995 | Msa0149980:CDS | 35.0% | |
| !! | AATCACCTTTAAAACGGGAA+AGG | - | chr1_4:11083061-11083080 | None:intergenic | 35.0% |
| GCAGAAATTTCCAGAGAATT+CGG | + | chr1_4:11083117-11083136 | Msa0149980:intron | 35.0% | |
| AAAAGAAAAACAGCTCACCA+AGG | - | chr1_4:11083144-11083163 | None:intergenic | 35.0% | |
| ACATGATGAGCGTTATAACT+TGG | + | chr1_4:11083439-11083458 | Msa0149980:CDS | 35.0% | |
| CATGATGAGCGTTATAACTT+GGG | + | chr1_4:11083440-11083459 | Msa0149980:CDS | 35.0% | |
| ATGATGAGCGTTATAACTTG+GGG | + | chr1_4:11083441-11083460 | Msa0149980:CDS | 35.0% | |
| ! | TATCATCACATGCATTGACA+TGG | + | chr1_4:11083510-11083529 | Msa0149980:CDS | 35.0% |
| TTAACATCTTGCATGAAGCA+AGG | + | chr1_4:11083850-11083869 | Msa0149980:CDS | 35.0% | |
| GTTAACCTAATCAAGAATGC+AGG | - | chr1_4:11084116-11084135 | None:intergenic | 35.0% | |
| TCCCATTGCTGTAAAACATA+TGG | - | chr1_4:11084496-11084515 | None:intergenic | 35.0% | |
| ! | TATGTTTTACAGCAATGGGA+AGG | + | chr1_4:11084496-11084515 | Msa0149980:intron | 35.0% |
| GGAAGGCTTAATTGAGTTAT+TGG | + | chr1_4:11084513-11084532 | Msa0149980:CDS | 35.0% | |
| TAAGATTAAAGTGACGGCAT+AGG | - | chr1_4:11084592-11084611 | None:intergenic | 35.0% | |
| GGATTGTCCAAAAATGAAGA+TGG | + | chr1_4:11084937-11084956 | Msa0149980:intron | 35.0% | |
| !!! | CAATGCACCTTTGAAGTTTT+AGG | - | chr1_4:11085008-11085027 | None:intergenic | 35.0% |
| ! | CTAAAACTTCAAAGGTGCAT+TGG | + | chr1_4:11085006-11085025 | Msa0149980:intron | 35.0% |
| TACCCTAAGATAGAAAGAAC+AGG | + | chr1_4:11085340-11085359 | Msa0149980:intron | 35.0% | |
| TGGTTTCAAAAAGAGACATC+TGG | + | chr1_4:11085389-11085408 | Msa0149980:intron | 35.0% | |
| ! | GTTTAAAATGTGTTGTGGAG+AGG | - | chr1_4:11085590-11085609 | None:intergenic | 35.0% |
| !!! | GCGCTGCTATTTTTTTTACA+AGG | + | chr1_4:11085895-11085914 | Msa0149980:intron | 35.0% |
| !!! | TTTAGTTTTTTGGGGTTCCT+AGG | + | chr1_4:11085945-11085964 | Msa0149980:intron | 35.0% |
| TATCTTTGTTAGGAAGGATG+AGG | + | chr1_4:11086114-11086133 | Msa0149980:intron | 35.0% | |
| ACAAAGTTCAGACATTGACA+TGG | + | chr1_4:11086260-11086279 | Msa0149980:intron | 35.0% | |
| TAGTGATGTAGTTTGGACTT+TGG | + | chr1_4:11086397-11086416 | Msa0149980:intron | 35.0% | |
| AGGCATAAAGAAACATATGC+GGG | - | chr1_4:11086491-11086510 | None:intergenic | 35.0% | |
| !! | TATTTCTGGGTCTCCATTAA+TGG | - | chr1_4:11086536-11086555 | None:intergenic | 35.0% |
| ! | AGTGGAATTCCTCTATTTCT+GGG | - | chr1_4:11086549-11086568 | None:intergenic | 35.0% |
| TAGTGGAATTCCTCTATTTC+TGG | - | chr1_4:11086550-11086569 | None:intergenic | 35.0% | |
| GAAATAATATTGGGAAGCTG+TGG | - | chr1_4:11086903-11086922 | None:intergenic | 35.0% | |
| CGTATAAATTGTCATGTCAC+TGG | + | chr1_4:11087060-11087079 | Msa0149980:intron | 35.0% | |
| ! | TTGTCATGTCACTGGTATTT+TGG | + | chr1_4:11087068-11087087 | Msa0149980:intron | 35.0% |
| ! | TGTCATGTCACTGGTATTTT+GGG | + | chr1_4:11087069-11087088 | Msa0149980:intron | 35.0% |
| !!! | TCACTGTTTTGGTGAATGTA+AGG | - | chr1_4:11087332-11087351 | None:intergenic | 35.0% |
| ! | GCTGTTAATCATCACTGTTT+TGG | - | chr1_4:11087343-11087362 | None:intergenic | 35.0% |
| TCATTCAAGGTAGATTCTTC+TGG | + | chr1_4:11087656-11087675 | Msa0149980:intron | 35.0% | |
| AGCCAACCAAATTAGAAACT+AGG | + | chr1_4:11087850-11087869 | Msa0149980:intron | 35.0% | |
| TGCCTAGTTTCTAATTTGGT+TGG | - | chr1_4:11087855-11087874 | None:intergenic | 35.0% | |
| ! | TTTTCTTCAGTTTCAGCCTA+TGG | + | chr1_4:11087882-11087901 | Msa0149980:intron | 35.0% |
| AAAGTAAGGTCTTACAATGC+TGG | + | chr1_4:11088030-11088049 | Msa0149980:intron | 35.0% | |
| ! | TTGAACAGATCTTTTGATGC+TGG | + | chr1_4:11088132-11088151 | Msa0149980:intron | 35.0% |
| !!! | AGGGTTTTTTTTTTCCATGC+TGG | + | chr1_4:11088185-11088204 | Msa0149980:intron | 35.0% |
| !! | CAAGTTGGTATCAAAGAACA+AGG | - | chr1_4:11088218-11088237 | None:intergenic | 35.0% |
| ! | ATCATTCTGGTGTTTCAAGT+TGG | - | chr1_4:11088233-11088252 | None:intergenic | 35.0% |
| ! | TTACTGATTAAGCTAAGGAG+TGG | + | chr1_4:11088274-11088293 | Msa0149980:intron | 35.0% |
| TAATAGAACTCAGTGCTTGA+GGG | - | chr1_4:11088750-11088769 | None:intergenic | 35.0% | |
| TGTAAATTGCTATGCCCTAA+TGG | + | chr1_4:11088911-11088930 | Msa0149980:three_prime_UTR | 35.0% | |
| !! | AGAATTGTTGTTGGTTTCGC+CGG | - | chr1_4:11077001-11077020 | None:intergenic | 40.0% |
| GATTGCGAGAGAATTGTTGT+TGG | - | chr1_4:11077010-11077029 | None:intergenic | 40.0% | |
| AACAGAAGGTTCTGCGAAAA+GGG | - | chr1_4:11077112-11077131 | None:intergenic | 40.0% | |
| GTCATTGAAGTTAAGCTTGG+AGG | + | chr1_4:11077174-11077193 | Msa0149980:intron | 40.0% | |
| ATTGAAGTTAAGCTTGGAGG+TGG | + | chr1_4:11077177-11077196 | Msa0149980:intron | 40.0% | |
| CAATCAGCATCATCAATCTC+CGG | - | chr1_4:11077207-11077226 | None:intergenic | 40.0% | |
| ACATATTCGAAATCGCACTC+CGG | - | chr1_4:11077281-11077300 | None:intergenic | 40.0% | |
| CAATCTAGCTGATACGTAGA+AGG | - | chr1_4:11077312-11077331 | None:intergenic | 40.0% | |
| CTTCTACGTATCAGCTAGAT+TGG | + | chr1_4:11077310-11077329 | Msa0149980:intron | 40.0% | |
| !! | AGTTGGTGGAAACTAAGCAT+AGG | + | chr1_4:11077756-11077775 | Msa0149980:intron | 40.0% |
| TTTAGCCTAACCTCATTGCA+AGG | + | chr1_4:11078126-11078145 | Msa0149980:intron | 40.0% | |
| TTAGCCTAACCTCATTGCAA+GGG | + | chr1_4:11078127-11078146 | Msa0149980:intron | 40.0% | |
| ! | GAAAGCACAGTGATTTCAAG+AGG | - | chr1_4:11078156-11078175 | None:intergenic | 40.0% |
| !! | TTTGGGTTGACAATCATGTG+CGG | + | chr1_4:11078226-11078245 | Msa0149980:intron | 40.0% |
| ! | TGTGTGCACTTGTTGACAAT+AGG | + | chr1_4:11078256-11078275 | Msa0149980:intron | 40.0% |
| GCATGTCCTTCAATATAGCA+AGG | + | chr1_4:11078308-11078327 | Msa0149980:CDS | 40.0% | |
| AGATAACATCGCTTCTCGTA+GGG | + | chr1_4:11078331-11078350 | Msa0149980:CDS | 40.0% | |
| GGTCTTCAATAATCGGACTA+GGG | - | chr1_4:11078368-11078387 | None:intergenic | 40.0% | |
| ! | AAATTCGCTTGTTGAGTGTG+TGG | + | chr1_4:11078422-11078441 | Msa0149980:intron | 40.0% |
| CATGCAGCTTTCAAACATGT+TGG | - | chr1_4:11078525-11078544 | None:intergenic | 40.0% | |
| CAACATGTTTGAAAGCTGCA+TGG | + | chr1_4:11078523-11078542 | Msa0149980:CDS | 40.0% | |
| !! | TACCTGAAAGGCTTGTTGAT+TGG | + | chr1_4:11078592-11078611 | Msa0149980:CDS | 40.0% |
| AACCAATCAACAAGCCTTTC+AGG | - | chr1_4:11078597-11078616 | None:intergenic | 40.0% | |
| CCAACCATCTACAAAACTTG+TGG | - | chr1_4:11078650-11078669 | None:intergenic | 40.0% | |
| !! | CCACAAGTTTTGTAGATGGT+TGG | + | chr1_4:11078647-11078666 | Msa0149980:intron | 40.0% |
| AACAATTCATGGCAAGCTAG+TGG | + | chr1_4:11078752-11078771 | Msa0149980:CDS | 40.0% | |
| !!! | TTTCACATAGCGGGTGTTTT+TGG | - | chr1_4:11079069-11079088 | None:intergenic | 40.0% |
| AAACAGAAGAAGCCGCATAA+CGG | + | chr1_4:11079109-11079128 | Msa0149980:intron | 40.0% | |
| GGTCATGTTTACAGATTCTC+AGG | + | chr1_4:11079441-11079460 | Msa0149980:intron | 40.0% | |
| TGTTTACAGATTCTCAGGGA+CGG | + | chr1_4:11079446-11079465 | Msa0149980:intron | 40.0% | |
| GTCAGTTGAGTTAAGCCATA+TGG | - | chr1_4:11079583-11079602 | None:intergenic | 40.0% | |
| !! | AAACCTTAAACGGTTCGGTT+CGG | - | chr1_4:11079694-11079713 | None:intergenic | 40.0% |
| ACCGAACTGAACCAAAGTTA+TGG | + | chr1_4:11079721-11079740 | Msa0149980:intron | 40.0% | |
| TCGGTTAATAGGCAAGCAAA+CGG | - | chr1_4:11079756-11079775 | None:intergenic | 40.0% | |
| !! | TTCAGTTCGGTTCGGTTAAT+AGG | - | chr1_4:11079767-11079786 | None:intergenic | 40.0% |
| CCACATAATCAGATCCTAGT+TGG | - | chr1_4:11079942-11079961 | None:intergenic | 40.0% | |
| CCAACTAGGATCTGATTATG+TGG | + | chr1_4:11079939-11079958 | Msa0149980:intron | 40.0% | |
| !! | TGATCAGGTTGAGAATGTAG+CGG | - | chr1_4:11080266-11080285 | None:intergenic | 40.0% |
| ! | TTCGGTTAACCGGTTCAAAT+TGG | + | chr1_4:11080605-11080624 | Msa0149980:intron | 40.0% |
| CTACATCAGCAAGCAGAAAT+CGG | + | chr1_4:11080904-11080923 | Msa0149980:intron | 40.0% | |
| AGCAAGCAGAAATCGGAATA+GGG | + | chr1_4:11080911-11080930 | Msa0149980:intron | 40.0% | |
| TACGCCGAAATTCGTTGAAT+TGG | - | chr1_4:11081095-11081114 | None:intergenic | 40.0% | |
| GTCGCTACAATTGTAAGGAA+GGG | + | chr1_4:11081353-11081372 | Msa0149980:intron | 40.0% | |
| TACAATTGTAAGGAAGGGAC+AGG | + | chr1_4:11081358-11081377 | Msa0149980:intron | 40.0% | |
| CTCCTAAAGGCTATATTCCT+GGG | + | chr1_4:11081426-11081445 | Msa0149980:intron | 40.0% | |
| TAGAAGCAAGCTTAAGAGAG+TGG | - | chr1_4:11081467-11081486 | None:intergenic | 40.0% | |
| GAGGATAGAATAAAAGGCCT+GGG | - | chr1_4:11081634-11081653 | None:intergenic | 40.0% | |
| TGAGGATAGAATAAAAGGCC+TGG | - | chr1_4:11081635-11081654 | None:intergenic | 40.0% | |
| TATGCCCAATGTTTCCTAAG+GGG | + | chr1_4:11081716-11081735 | Msa0149980:intron | 40.0% | |
| GATTTCCCCTTAGGAAACAT+TGG | - | chr1_4:11081724-11081743 | None:intergenic | 40.0% | |
| CAATTTCTCAAAGGTTGGAG+AGG | + | chr1_4:11081892-11081911 | Msa0149980:intron | 40.0% | |
| GACATCACTTCCCAATATCT+GGG | - | chr1_4:11081963-11081982 | None:intergenic | 40.0% | |
| TGACATCACTTCCCAATATC+TGG | - | chr1_4:11081964-11081983 | None:intergenic | 40.0% | |
| ATGTCATCTGCATTGTCAGT+TGG | + | chr1_4:11081978-11081997 | Msa0149980:CDS | 40.0% | |
| ! | AGTTGGTTGGCTAGATATAG+TGG | + | chr1_4:11081995-11082014 | Msa0149980:CDS | 40.0% |
| TCGGTGGTTCAGTTAGAAAA+TGG | + | chr1_4:11082323-11082342 | Msa0149980:intron | 40.0% | |
| AAATTTCCAGCAGCAGATTC+AGG | - | chr1_4:11082398-11082417 | None:intergenic | 40.0% | |
| TGAATCTGCTGCTGGAAATT+TGG | + | chr1_4:11082397-11082416 | Msa0149980:CDS | 40.0% | |
| GAATCTGCTGCTGGAAATTT+GGG | + | chr1_4:11082398-11082417 | Msa0149980:CDS | 40.0% | |
| ! | TTTTATAGGCCTGGGAGAAA+TGG | + | chr1_4:11082549-11082568 | Msa0149980:intron | 40.0% |
| TGATAATCAACAAACTCGCG+AGG | + | chr1_4:11082619-11082638 | Msa0149980:CDS | 40.0% | |
| GATAATCAACAAACTCGCGA+GGG | + | chr1_4:11082620-11082639 | Msa0149980:CDS | 40.0% | |
| TCTGTACAGCTTCATGTTAC+TGG | + | chr1_4:11082687-11082706 | Msa0149980:CDS | 40.0% | |
| GTTTCAATTGGATGCACTTC+TGG | - | chr1_4:11082919-11082938 | None:intergenic | 40.0% | |
| ATCCAATTGAAACCACCTAC+TGG | + | chr1_4:11082926-11082945 | Msa0149980:CDS | 40.0% | |
| TACCAGTAGGTGGTTTCAAT+TGG | - | chr1_4:11082931-11082950 | None:intergenic | 40.0% | |
| GATTCTTGGAGAAAATACGG+AGG | + | chr1_4:11082979-11082998 | Msa0149980:CDS | 40.0% | |
| AGTAGCTCCCTTCCTTAATT+TGG | + | chr1_4:11083307-11083326 | Msa0149980:intron | 40.0% | |
| TGATGAGCGTTATAACTTGG+GGG | + | chr1_4:11083442-11083461 | Msa0149980:CDS | 40.0% | |
| ! | TCAGTATGGTGGAACTTCAT+CGG | + | chr1_4:11083468-11083487 | Msa0149980:CDS | 40.0% |
| TGAGGAAACCTAAACTGTCA+AGG | + | chr1_4:11083685-11083704 | Msa0149980:intron | 40.0% | |
| !! | TCATTTGGCCTTGACAGTTT+AGG | - | chr1_4:11083696-11083715 | None:intergenic | 40.0% |
| ATCTTGCATGAAGCAAGGAA+TGG | + | chr1_4:11083855-11083874 | Msa0149980:CDS | 40.0% | |
| TCTTGCATGAAGCAAGGAAT+GGG | + | chr1_4:11083856-11083875 | Msa0149980:CDS | 40.0% | |
| GGTAACCTGCATTCTTGATT+AGG | + | chr1_4:11084108-11084127 | Msa0149980:intron | 40.0% | |
| AGTACTTTGGGTACAAAGCT+TGG | + | chr1_4:11084143-11084162 | Msa0149980:intron | 40.0% | |
| !!! | GTAAAGGTGCTGGAGTATTT+TGG | + | chr1_4:11084266-11084285 | Msa0149980:CDS | 40.0% |
| TCCACTGTATACCATCTGAA+GGG | - | chr1_4:11084702-11084721 | None:intergenic | 40.0% | |
| TTCCACTGTATACCATCTGA+AGG | - | chr1_4:11084703-11084722 | None:intergenic | 40.0% | |
| !!! | GGTGGTACTTGTTTTGTTCA+TGG | - | chr1_4:11084895-11084914 | None:intergenic | 40.0% |
| ! | CAATTTTGTTGGAGTGTAGG+TGG | + | chr1_4:11085086-11085105 | Msa0149980:intron | 40.0% |
| TTTCGTATTTAGGTGGGAGT+TGG | - | chr1_4:11085452-11085471 | None:intergenic | 40.0% | |
| ! | CGTACACAAGTTTTTCCAGT+TGG | + | chr1_4:11085779-11085798 | Msa0149980:intron | 40.0% |
| GTATTTCTCACCTTACAAGC+CGG | + | chr1_4:11086053-11086072 | Msa0149980:intron | 40.0% | |
| CTAACTCAACCCTACAAAAC+CGG | - | chr1_4:11086075-11086094 | None:intergenic | 40.0% | |
| GAAGGATGAGGTTGACAATA+GGG | + | chr1_4:11086126-11086145 | Msa0149980:intron | 40.0% | |
| AAGGATGAGGTTGACAATAG+GGG | + | chr1_4:11086127-11086146 | Msa0149980:intron | 40.0% | |
| GCATGGACAAAAAAAGCAAG+CGG | + | chr1_4:11086172-11086191 | Msa0149980:intron | 40.0% | |
| TAATGGAGACCCAGAAATAG+AGG | + | chr1_4:11086537-11086556 | Msa0149980:intron | 40.0% | |
| AAGCTCGCTAACAACTGAAT+CGG | - | chr1_4:11086599-11086618 | None:intergenic | 40.0% | |
| TTCTGTTTGTATGCGTTGAG+TGG | + | chr1_4:11086830-11086849 | Msa0149980:intron | 40.0% | |
| TCTAATGCAGTGGTTTATCG+TGG | + | chr1_4:11087003-11087022 | Msa0149980:intron | 40.0% | |
| CTAATGCAGTGGTTTATCGT+GGG | + | chr1_4:11087004-11087023 | Msa0149980:intron | 40.0% | |
| !! | ATGTCACTGGTATTTTGGGA+GGG | + | chr1_4:11087073-11087092 | Msa0149980:intron | 40.0% |
| !! | CTTCGTCCTTTGAGGTTATA+AGG | + | chr1_4:11087250-11087269 | Msa0149980:intron | 40.0% |
| !! | GCATAGCCTTATAACCTCAA+AGG | - | chr1_4:11087259-11087278 | None:intergenic | 40.0% |
| ! | GGCAAACACACTTTTAGACT+TGG | + | chr1_4:11087417-11087436 | Msa0149980:intron | 40.0% |
| GTGACTAGAATGGTTGACAA+CGG | + | chr1_4:11087557-11087576 | Msa0149980:intron | 40.0% | |
| ! | CGCATGTTTTCCATAACGTA+AGG | - | chr1_4:11087629-11087648 | None:intergenic | 40.0% |
| CATGCGAGTATCTTCATTCA+AGG | + | chr1_4:11087643-11087662 | Msa0149980:intron | 40.0% | |
| AACCGTTGATCCAACTTCAT+TGG | + | chr1_4:11087690-11087709 | Msa0149980:intron | 40.0% | |
| TGCCAATGAAGTTGGATCAA+CGG | - | chr1_4:11087695-11087714 | None:intergenic | 40.0% | |
| ! | GTTTCTAATTTGGTTGGCTG+CGG | - | chr1_4:11087849-11087868 | None:intergenic | 40.0% |
| TTCAGCCTATGGAATATCTG+TGG | + | chr1_4:11087893-11087912 | Msa0149980:intron | 40.0% | |
| TTCTGCCACAGATATTCCAT+AGG | - | chr1_4:11087901-11087920 | None:intergenic | 40.0% | |
| CCTGATTCACTAGCATTGTA+AGG | - | chr1_4:11088002-11088021 | None:intergenic | 40.0% | |
| CCTTACAATGCTAGTGAATC+AGG | + | chr1_4:11087999-11088018 | Msa0149980:intron | 40.0% | |
| ATCAGGCAAGGTTGAAAGTA+AGG | + | chr1_4:11088016-11088035 | Msa0149980:intron | 40.0% | |
| GTTTCTGTAGCGTGATTGAA+GGG | - | chr1_4:11088070-11088089 | None:intergenic | 40.0% | |
| AGTTTCTGTAGCGTGATTGA+AGG | - | chr1_4:11088071-11088090 | None:intergenic | 40.0% | |
| GCTACAGAAACTGCACAAAT+GGG | + | chr1_4:11088079-11088098 | Msa0149980:intron | 40.0% | |
| GGTATCAAAGAACAAGGTTC+TGG | - | chr1_4:11088212-11088231 | None:intergenic | 40.0% | |
| CAAAATCACAGAATCCACTC+AGG | + | chr1_4:11088322-11088341 | Msa0149980:intron | 40.0% | |
| AGAATCCACTCAGGTTTGAA+AGG | + | chr1_4:11088331-11088350 | Msa0149980:intron | 40.0% | |
| GAATCCACTCAGGTTTGAAA+GGG | + | chr1_4:11088332-11088351 | Msa0149980:intron | 40.0% | |
| TTATCCCTTTCAAACCTGAG+TGG | - | chr1_4:11088339-11088358 | None:intergenic | 40.0% | |
| AGGATCTACAATGATACGAG+AGG | - | chr1_4:11088477-11088496 | None:intergenic | 40.0% | |
| TTCAAGAGTTATCTTTGGCG+AGG | + | chr1_4:11088692-11088711 | Msa0149980:CDS | 40.0% | |
| AATAGAACTCAGTGCTTGAG+GGG | - | chr1_4:11088749-11088768 | None:intergenic | 40.0% | |
| CTAATAGAACTCAGTGCTTG+AGG | - | chr1_4:11088751-11088770 | None:intergenic | 40.0% | |
| !! | CTCAAGCACTGAGTTCTATT+AGG | + | chr1_4:11088749-11088768 | Msa0149980:CDS | 40.0% |
| AGGGCATAGCAATTTACAAC+CGG | - | chr1_4:11088909-11088928 | None:intergenic | 40.0% | |
| ! | GTGACATTGGACAGTTTTCT+CGG | + | chr1_4:11088967-11088986 | Msa0149980:three_prime_UTR | 40.0% |
| GATACATGATAGCCATTCCT+CGG | - | chr1_4:11089032-11089051 | None:intergenic | 40.0% | |
| TTGCAAGGCGAGAAATTGGA+CGG | - | chr1_4:11077056-11077075 | None:intergenic | 45.0% | |
| GAGATTGCAAGGCGAGAAAT+TGG | - | chr1_4:11077060-11077079 | None:intergenic | 45.0% | |
| CAACAGAAGGTTCTGCGAAA+AGG | - | chr1_4:11077113-11077132 | None:intergenic | 45.0% | |
| ! | AATGACTTTTGCGCCATCTC+CGG | - | chr1_4:11077160-11077179 | None:intergenic | 45.0% |
| !! | CGGAGATTGATGATGCTGAT+TGG | + | chr1_4:11077205-11077224 | Msa0149980:CDS | 45.0% |
| GATTGGCGAAGAATTGCGTA+TGG | + | chr1_4:11077222-11077241 | Msa0149980:CDS | 45.0% | |
| CTGAACACTACACTGACATG+TGG | + | chr1_4:11077425-11077444 | Msa0149980:intron | 45.0% | |
| ! | AGTGCCTTCAATCTGAAGTC+TGG | + | chr1_4:11077510-11077529 | Msa0149980:intron | 45.0% |
| ! | GTGCCTTCAATCTGAAGTCT+GGG | + | chr1_4:11077511-11077530 | Msa0149980:intron | 45.0% |
| ACACCCAGACTTCAGATTGA+AGG | - | chr1_4:11077517-11077536 | None:intergenic | 45.0% | |
| TGGTGGAAACTAAGCATAGG+TGG | + | chr1_4:11077759-11077778 | Msa0149980:intron | 45.0% | |
| AGCAAGGAGAGTAGATCAGA+TGG | + | chr1_4:11077821-11077840 | Msa0149980:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr1_4:11077824-11077843 | Msa0149980:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | + | chr1_4:11077825-11077844 | Msa0149980:intron | 45.0% | |
| TGAAGTTCTGTCCTGAACTC+TGG | + | chr1_4:11078071-11078090 | Msa0149980:intron | 45.0% | |
| GTATCCCTTGCAATGAGGTT+AGG | - | chr1_4:11078134-11078153 | None:intergenic | 45.0% | |
| !! | AAGAGGTATCCCTTGCAATG+AGG | - | chr1_4:11078139-11078158 | None:intergenic | 45.0% |
| GAGATAACATCGCTTCTCGT+AGG | + | chr1_4:11078330-11078349 | Msa0149980:CDS | 45.0% | |
| GGGTCTTCAATAATCGGACT+AGG | - | chr1_4:11078369-11078388 | None:intergenic | 45.0% | |
| TGGACAAACAATCCCAAGCA+TGG | + | chr1_4:11078568-11078587 | Msa0149980:CDS | 45.0% | |
| GTTTGTGTTGCAGCATATGG+TGG | + | chr1_4:11078895-11078914 | Msa0149980:intron | 45.0% | |
| AACAACACATGCTAGAGCAG+TGG | + | chr1_4:11079010-11079029 | Msa0149980:intron | 45.0% | |
| TAACCGAACCGAACCGTTTA+AGG | + | chr1_4:11079688-11079707 | Msa0149980:intron | 45.0% | |
| !!! | GGTTTTGGTTCAGTTCGGTT+CGG | - | chr1_4:11079775-11079794 | None:intergenic | 45.0% |
| TGAGGCAAATGCTGTCAGTT+TGG | + | chr1_4:11080016-11080035 | Msa0149980:intron | 45.0% | |
| !! | TAATGGTTCGGTTCGCGAAT+TGG | + | chr1_4:11080549-11080568 | Msa0149980:intron | 45.0% |
| CGGTTCGCGAATTGGTTAAA+TGG | + | chr1_4:11080557-11080576 | Msa0149980:intron | 45.0% | |
| TTCAGCTTAGCAATAGGGCT+GGG | - | chr1_4:11080647-11080666 | None:intergenic | 45.0% | |
| AACTGAAGAATCTGCGGTGA+TGG | - | chr1_4:11080850-11080869 | None:intergenic | 45.0% | |
| CAGCAAGCAGAAATCGGAAT+AGG | + | chr1_4:11080910-11080929 | Msa0149980:intron | 45.0% | |
| GCAAGCAGAAATCGGAATAG+GGG | + | chr1_4:11080912-11080931 | Msa0149980:intron | 45.0% | |
| GATGGCAGCATTTAGCATAG+AGG | - | chr1_4:11081003-11081022 | None:intergenic | 45.0% | |
| GAGTTGACGACTAACAGTGA+TGG | - | chr1_4:11081021-11081040 | None:intergenic | 45.0% | |
| TGAAATTAGCTGCTGGAGGT+AGG | - | chr1_4:11081194-11081213 | None:intergenic | 45.0% | |
| ACCTCCAGCAGCTAATTTCA+AGG | + | chr1_4:11081194-11081213 | Msa0149980:intron | 45.0% | |
| CCTCCAGCAGCTAATTTCAA+GGG | + | chr1_4:11081195-11081214 | Msa0149980:intron | 45.0% | |
| CGACGCACTTCAAGTAGTAT+AGG | - | chr1_4:11081337-11081356 | None:intergenic | 45.0% | |
| AGTGCGTCGCTACAATTGTA+AGG | + | chr1_4:11081348-11081367 | Msa0149980:intron | 45.0% | |
| CGTCGCTACAATTGTAAGGA+AGG | + | chr1_4:11081352-11081371 | Msa0149980:intron | 45.0% | |
| ! | GAGTGCTATTAGCCTCCTAA+AGG | + | chr1_4:11081413-11081432 | Msa0149980:intron | 45.0% |
| CCAGGAATATAGCCTTTAGG+AGG | - | chr1_4:11081428-11081447 | None:intergenic | 45.0% | |
| CCTCCTAAAGGCTATATTCC+TGG | + | chr1_4:11081425-11081444 | Msa0149980:intron | 45.0% | |
| AGCCCAGGAATATAGCCTTT+AGG | - | chr1_4:11081431-11081450 | None:intergenic | 45.0% | |
| ! | TGACAATGGCAGTGGTAATG+GGG | - | chr1_4:11081606-11081625 | None:intergenic | 45.0% |
| GTGACAATGGCAGTGGTAAT+GGG | - | chr1_4:11081607-11081626 | None:intergenic | 45.0% | |
| TGTGACAATGGCAGTGGTAA+TGG | - | chr1_4:11081608-11081627 | None:intergenic | 45.0% | |
| ! | TGTAGAGTGGATTTCCCCTT+AGG | - | chr1_4:11081733-11081752 | None:intergenic | 45.0% |
| CATCTGCATTGTCAGTTGGT+TGG | + | chr1_4:11081982-11082001 | Msa0149980:CDS | 45.0% | |
| GTGAAAATGTTGCGGTTGCA+TGG | + | chr1_4:11082102-11082121 | Msa0149980:CDS | 45.0% | |
| CAATTTCTGTCCTCTTTCGG+TGG | + | chr1_4:11082307-11082326 | Msa0149980:intron | 45.0% | |
| TCTAACTGAACCACCGAAAG+AGG | - | chr1_4:11082320-11082339 | None:intergenic | 45.0% | |
| !! | AGGACGTAATCGAGGCATTT+TGG | - | chr1_4:11082378-11082397 | None:intergenic | 45.0% |
| ! | AACTGGACTGCAGTCCATTT+TGG | + | chr1_4:11082588-11082607 | Msa0149980:CDS | 45.0% |
| TCTACTCCCTGCGTAGAAAA+GGG | - | chr1_4:11082878-11082897 | None:intergenic | 45.0% | |
| TTCTACTCCCTGCGTAGAAA+AGG | - | chr1_4:11082879-11082898 | None:intergenic | 45.0% | |
| TTTCCAGAGAATTCGGTCCT+TGG | + | chr1_4:11083124-11083143 | Msa0149980:intron | 45.0% | |
| CCCTGCAGTTAACAATTCCA+CGG | - | chr1_4:11083396-11083415 | None:intergenic | 45.0% | |
| CCGTGGAATTGTTAACTGCA+GGG | + | chr1_4:11083393-11083412 | Msa0149980:CDS | 45.0% | |
| GATGAGCGTTATAACTTGGG+GGG | + | chr1_4:11083443-11083462 | Msa0149980:CDS | 45.0% | |
| TAACTTGGGGGGAATCAGTA+TGG | + | chr1_4:11083454-11083473 | Msa0149980:CDS | 45.0% | |
| !! | ACACAGCAACGTGTTGCTTA+AGG | + | chr1_4:11083915-11083934 | Msa0149980:CDS | 45.0% |
| TCTCGATGTTCTGCATGAGT+AGG | - | chr1_4:11084042-11084061 | None:intergenic | 45.0% | |
| AAAAACTCAAGACCTCCAGC+AGG | - | chr1_4:11084553-11084572 | None:intergenic | 45.0% | |
| TCCCTTCAGATGGTATACAG+TGG | + | chr1_4:11084698-11084717 | Msa0149980:CDS | 45.0% | |
| AGTACCACCAAAGACACTAG+AGG | + | chr1_4:11084906-11084925 | Msa0149980:intron | 45.0% | |
| ! | CAAAGACACTAGAGGCATGA+CGG | + | chr1_4:11084914-11084933 | Msa0149980:intron | 45.0% |
| ! | AAAGACACTAGAGGCATGAC+GGG | + | chr1_4:11084915-11084934 | Msa0149980:intron | 45.0% |
| ! | ACAACACGCATTTTGCACAG+TGG | - | chr1_4:11085188-11085207 | None:intergenic | 45.0% |
| !! | GAGTTGGTGCTTGCTGTTAT+TGG | - | chr1_4:11085436-11085455 | None:intergenic | 45.0% |
| ! | ATACCAGCAGCCACAACTTT+TGG | + | chr1_4:11085476-11085495 | Msa0149980:intron | 45.0% |
| ATACCAAAAGTTGTGGCTGC+TGG | - | chr1_4:11085482-11085501 | None:intergenic | 45.0% | |
| GGTTGAATTATTGGAGGCCT+AGG | - | chr1_4:11085965-11085984 | None:intergenic | 45.0% | |
| !! | ACCTTACAAGCCGGTTTTGT+AGG | + | chr1_4:11086062-11086081 | Msa0149980:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+GGG | + | chr1_4:11086063-11086082 | Msa0149980:intron | 45.0% |
| !! | CGGTTTTGTAGGGTTGAGTT+AGG | + | chr1_4:11086073-11086092 | Msa0149980:intron | 45.0% |
| GGAAGGATGAGGTTGACAAT+AGG | + | chr1_4:11086125-11086144 | Msa0149980:intron | 45.0% | |
| AGGTTGACAATAGGGGATCT+GGG | + | chr1_4:11086134-11086153 | Msa0149980:intron | 45.0% | |
| !! | CATGTCACTGGTATTTTGGG+AGG | + | chr1_4:11087072-11087091 | Msa0149980:intron | 45.0% |
| ! | GTTCTGAACTTCGTCCTTTG+AGG | + | chr1_4:11087242-11087261 | Msa0149980:intron | 45.0% |
| GTTGACAACGGCATAGTAAG+AGG | + | chr1_4:11087569-11087588 | Msa0149980:intron | 45.0% | |
| ATCCATGTAGGTAGTAGCGA+CGG | + | chr1_4:11087728-11087747 | Msa0149980:intron | 45.0% | |
| GGTCTCATTCACTGTAAGAG+TGG | + | chr1_4:11087764-11087783 | Msa0149980:intron | 45.0% | |
| CTCATTCACTGTAAGAGTGG+TGG | + | chr1_4:11087767-11087786 | Msa0149980:intron | 45.0% | |
| TCTCAGAGAAGAGCTAGTGT+TGG | - | chr1_4:11087817-11087836 | None:intergenic | 45.0% | |
| CTTCAAAGTTAGGGCAGAAC+AGG | + | chr1_4:11087937-11087956 | Msa0149980:intron | 45.0% | |
| CAGAACAGGAACCTGATGAA+GGG | + | chr1_4:11087951-11087970 | Msa0149980:intron | 45.0% | |
| AGAACAGGAACCTGATGAAG+GGG | + | chr1_4:11087952-11087971 | Msa0149980:intron | 45.0% | |
| AGTTTCTTTGCCCCTTCATC+AGG | - | chr1_4:11087965-11087984 | None:intergenic | 45.0% | |
| ATGAAGGGGCAAAGAAACTG+TGG | + | chr1_4:11087966-11087985 | Msa0149980:intron | 45.0% | |
| TCACTAGCATTGTAAGGCTC+TGG | - | chr1_4:11087996-11088015 | None:intergenic | 45.0% | |
| CAATGCTAGTGAATCAGGCA+AGG | + | chr1_4:11088004-11088023 | Msa0149980:intron | 45.0% | |
| GTCTTACAATGCTGGCAAGT+TGG | + | chr1_4:11088038-11088057 | Msa0149980:intron | 45.0% | |
| CGCTACAGAAACTGCACAAA+TGG | + | chr1_4:11088078-11088097 | Msa0149980:intron | 45.0% | |
| ACTGCACAAATGGGATTGCA+TGG | + | chr1_4:11088088-11088107 | Msa0149980:intron | 45.0% | |
| GTCTCAGATACACTGAGAAG+AGG | - | chr1_4:11088652-11088671 | None:intergenic | 45.0% | |
| AAGTTAGGCTCAGTGAAGTG+CGG | - | chr1_4:11088724-11088743 | None:intergenic | 45.0% | |
| ATAGAACTCAGTGCTTGAGG+GGG | - | chr1_4:11088748-11088767 | None:intergenic | 45.0% | |
| ! | AGCACTGAGTTCTATTAGGC+TGG | + | chr1_4:11088753-11088772 | Msa0149980:CDS | 45.0% |
| !! | CTGGCTCTAGCAACAAATCT+TGG | + | chr1_4:11088772-11088791 | Msa0149980:CDS | 45.0% |
| TGTCATTCAACAGCCTGTGT+TGG | + | chr1_4:11088859-11088878 | Msa0149980:three_prime_UTR | 45.0% | |
| !!! | ACAGTTTTCTCGGTTTGCTG+AGG | + | chr1_4:11088977-11088996 | Msa0149980:three_prime_UTR | 45.0% |
| TGAAGATGCAACGTTGGTGT+CGG | - | chr1_4:11089068-11089087 | None:intergenic | 45.0% | |
| GATTAGGGTTCCGTTGTCGA+CGG | - | chr1_4:11076971-11076990 | None:intergenic | 50.0% | |
| GGAACCCTAATCCCATTCTC+CGG | + | chr1_4:11076979-11076998 | Msa0149980:CDS | 50.0% | |
| TTCGCCGGAGAATGGGATTA+GGG | - | chr1_4:11076986-11077005 | None:intergenic | 50.0% | |
| TTTCGCCGGAGAATGGGATT+AGG | - | chr1_4:11076987-11077006 | None:intergenic | 50.0% | |
| !! | TGTTGGTTTCGCCGGAGAAT+GGG | - | chr1_4:11076993-11077012 | None:intergenic | 50.0% |
| !! | TTGTTGGTTTCGCCGGAGAA+TGG | - | chr1_4:11076994-11077013 | None:intergenic | 50.0% |
| AAATTGGACGGGTGAGAGTG+TGG | - | chr1_4:11077044-11077063 | None:intergenic | 50.0% | |
| TGCAAGGCGAGAAATTGGAC+GGG | - | chr1_4:11077055-11077074 | None:intergenic | 50.0% | |
| TTTCTCGCCTTGCAATCTCC+TGG | + | chr1_4:11077061-11077080 | Msa0149980:intron | 50.0% | |
| TAAGCTTGGAGGTGGAGATC+CGG | + | chr1_4:11077185-11077204 | Msa0149980:intron | 50.0% | |
| !! | CGACTCTGAAGCAACGCAAA+CGG | - | chr1_4:11077258-11077277 | None:intergenic | 50.0% |
| CTACACTGACATGTGGACAC+TGG | + | chr1_4:11077432-11077451 | Msa0149980:intron | 50.0% | |
| ! | CTGAAGTCTGGGTGTTGCAT+AGG | + | chr1_4:11077522-11077541 | Msa0149980:intron | 50.0% |
| ACTAAGTGGGGTAGGCAACA+TGG | - | chr1_4:11077966-11077985 | None:intergenic | 50.0% | |
| ATGTTGCCTACCCCACTTAG+TGG | + | chr1_4:11077965-11077984 | Msa0149980:intron | 50.0% | |
| TGTTGCCTACCCCACTTAGT+GGG | + | chr1_4:11077966-11077985 | Msa0149980:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+AGG | - | chr1_4:11077974-11077993 | None:intergenic | 50.0% | |
| CTACCCCACTTAGTGGGATA+AGG | + | chr1_4:11077972-11077991 | Msa0149980:intron | 50.0% | |
| ! | GAGCCTTATCCCACTAAGTG+GGG | - | chr1_4:11077978-11077997 | None:intergenic | 50.0% |
| ! | CGAGCCTTATCCCACTAAGT+GGG | - | chr1_4:11077979-11077998 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+CGG | + | chr1_4:11077977-11077996 | Msa0149980:intron | 50.0% | |
| CTTCTCGTAGGGCCAAAGTT+GGG | + | chr1_4:11078342-11078361 | Msa0149980:CDS | 50.0% | |
| GAAAGCTGCATGGGAGTTGA+TGG | + | chr1_4:11078533-11078552 | Msa0149980:CDS | 50.0% | |
| ! | CCTTTCAGGTAGCCATGCTT+GGG | - | chr1_4:11078583-11078602 | None:intergenic | 50.0% |
| GGCGTTTGTGTTGCAGCATA+TGG | + | chr1_4:11078892-11078911 | Msa0149980:intron | 50.0% | |
| ! | TGCTAGAGCAGTGGTATCGA+TGG | + | chr1_4:11079019-11079038 | Msa0149980:intron | 50.0% |
| !! | GTGGTATCGATGGCAGATTG+CGG | + | chr1_4:11079029-11079048 | Msa0149980:intron | 50.0% |
| TCGATATTGCTAGGTAGGGG+TGG | + | chr1_4:11079607-11079626 | Msa0149980:intron | 50.0% | |
| CGATATTGCTAGGTAGGGGT+GGG | + | chr1_4:11079608-11079627 | Msa0149980:intron | 50.0% | |
| !! | TACGGTTCGGTTCGGTTAAC+CGG | + | chr1_4:11080595-11080614 | Msa0149980:intron | 50.0% |
| GTTCAGCTTAGCAATAGGGC+TGG | - | chr1_4:11080648-11080667 | None:intergenic | 50.0% | |
| CCCTTGAAATTAGCTGCTGG+AGG | - | chr1_4:11081198-11081217 | None:intergenic | 50.0% | |
| ACGCCCTTGAAATTAGCTGC+TGG | - | chr1_4:11081201-11081220 | None:intergenic | 50.0% | |
| CTTAAGAGAGTGGCACATGC+AGG | - | chr1_4:11081457-11081476 | None:intergenic | 50.0% | |
| !! | GACAATGGCAGTGGTAATGG+GGG | - | chr1_4:11081605-11081624 | None:intergenic | 50.0% |
| !! | GGGTTTTGTGACAATGGCAG+TGG | - | chr1_4:11081614-11081633 | None:intergenic | 50.0% |
| CTGCCATTGTCACAAAACCC+AGG | + | chr1_4:11081614-11081633 | Msa0149980:intron | 50.0% | |
| !! | AGGCCTGGGTTTTGTGACAA+TGG | - | chr1_4:11081620-11081639 | None:intergenic | 50.0% |
| ! | GGTTGCTGAGCTGGTCTAAT+TGG | - | chr1_4:11082134-11082153 | None:intergenic | 50.0% |
| GCAGATTCAGGACGTAATCG+AGG | - | chr1_4:11082386-11082405 | None:intergenic | 50.0% | |
| TTACGTCCTGAATCTGCTGC+TGG | + | chr1_4:11082389-11082408 | Msa0149980:CDS | 50.0% | |
| TATAGGCCTGGGAGAAATGG+AGG | + | chr1_4:11082552-11082571 | Msa0149980:intron | 50.0% | |
| TTGTGACCTCCATTTCTCCC+AGG | - | chr1_4:11082561-11082580 | None:intergenic | 50.0% | |
| TACTCCCTGCGTAGAAAAGG+GGG | - | chr1_4:11082876-11082895 | None:intergenic | 50.0% | |
| CTACTCCCTGCGTAGAAAAG+GGG | - | chr1_4:11082877-11082896 | None:intergenic | 50.0% | |
| AACCACCTACTGGTACCCAT+AGG | + | chr1_4:11082936-11082955 | Msa0149980:CDS | 50.0% | |
| AACCTATGGGTACCAGTAGG+TGG | - | chr1_4:11082941-11082960 | None:intergenic | 50.0% | |
| GTCAACCTATGGGTACCAGT+AGG | - | chr1_4:11082944-11082963 | None:intergenic | 50.0% | |
| ! | ACTGGTACCCATAGGTTGAC+TGG | + | chr1_4:11082944-11082963 | Msa0149980:CDS | 50.0% |
| TCACCAAGGACCGAATTCTC+TGG | - | chr1_4:11083130-11083149 | None:intergenic | 50.0% | |
| GCCGTGGAATTGTTAACTGC+AGG | + | chr1_4:11083392-11083411 | Msa0149980:CDS | 50.0% | |
| AGGTTGCTGGAGTCTATCAC+TGG | + | chr1_4:11084233-11084252 | Msa0149980:intron | 50.0% | |
| GGAGTCTATCACTGGAAGCA+TGG | + | chr1_4:11084241-11084260 | Msa0149980:CDS | 50.0% | |
| ! | CACTGGAAGCATGGTCGTAA+AGG | + | chr1_4:11084250-11084269 | Msa0149980:CDS | 50.0% |
| ! | AAGCATGGTCGTAAAGGTGC+TGG | + | chr1_4:11084256-11084275 | Msa0149980:CDS | 50.0% |
| GGATCTGAATCTAAGCCTGC+TGG | + | chr1_4:11084535-11084554 | Msa0149980:CDS | 50.0% | |
| TCTGAATCTAAGCCTGCTGG+AGG | + | chr1_4:11084538-11084557 | Msa0149980:CDS | 50.0% | |
| AGCTGTAGACTCCCTCATAC+TGG | + | chr1_4:11084745-11084764 | Msa0149980:CDS | 50.0% | |
| CATGCCTCTAGTGTCTTTGG+TGG | - | chr1_4:11084913-11084932 | None:intergenic | 50.0% | |
| CGTCATGCCTCTAGTGTCTT+TGG | - | chr1_4:11084916-11084935 | None:intergenic | 50.0% | |
| ! | AAGACACTAGAGGCATGACG+GGG | + | chr1_4:11084916-11084935 | Msa0149980:intron | 50.0% |
| GACATCTGGACAACACATGC+AGG | + | chr1_4:11085403-11085422 | Msa0149980:intron | 50.0% | |
| GTGTTGTGGAGAGGACATGT+CGG | - | chr1_4:11085581-11085600 | None:intergenic | 50.0% | |
| !! | CCCTACAAAACCGGCTTGTA+AGG | - | chr1_4:11086066-11086085 | None:intergenic | 50.0% |
| GAGGTTGACAATAGGGGATC+TGG | + | chr1_4:11086133-11086152 | Msa0149980:intron | 50.0% | |
| ACTCACCGAGTCAACCAGAA+GGG | - | chr1_4:11086703-11086722 | None:intergenic | 50.0% | |
| TACTCACCGAGTCAACCAGA+AGG | - | chr1_4:11086704-11086723 | None:intergenic | 50.0% | |
| ACGAAGTTCAGAACCCCTCA+GGG | - | chr1_4:11087236-11087255 | None:intergenic | 50.0% | |
| ! | TTGATGAGGTGCTAGCTCAG+TGG | - | chr1_4:11087287-11087306 | None:intergenic | 50.0% |
| TCTGCATGCAGACACCTGTT+GGG | - | chr1_4:11087515-11087534 | None:intergenic | 50.0% | |
| GACAAGCTATGTCTGCATGC+AGG | + | chr1_4:11087535-11087554 | Msa0149980:intron | 50.0% | |
| CTGCATGCAGGTGACTAGAA+TGG | + | chr1_4:11087547-11087566 | Msa0149980:intron | 50.0% | |
| GCATAGTAAGAGGAAGACGC+CGG | + | chr1_4:11087579-11087598 | Msa0149980:intron | 50.0% | |
| CATAGTAAGAGGAAGACGCC+GGG | + | chr1_4:11087580-11087599 | Msa0149980:intron | 50.0% | |
| CTTCAACTTAGATGCCAGCC+CGG | - | chr1_4:11087601-11087620 | None:intergenic | 50.0% | |
| AGCGACGGTCTTAAGTGTGT+TGG | + | chr1_4:11087743-11087762 | Msa0149980:intron | 50.0% | |
| !! | AGAAGAGCTAGTGTTGGTGG+TGG | - | chr1_4:11087811-11087830 | None:intergenic | 50.0% |
| ! | CAGAGAAGAGCTAGTGTTGG+TGG | - | chr1_4:11087814-11087833 | None:intergenic | 50.0% |
| GCAGAACAGGAACCTGATGA+AGG | + | chr1_4:11087950-11087969 | Msa0149980:intron | 50.0% | |
| ! | CTAGCATTGTAAGGCTCTGG+TGG | - | chr1_4:11087993-11088012 | None:intergenic | 50.0% |
| ! | AACAAGGTTCTGGTCCAGCA+TGG | - | chr1_4:11088202-11088221 | None:intergenic | 50.0% |
| AGTTAGGCTCAGTGAAGTGC+GGG | - | chr1_4:11088723-11088742 | None:intergenic | 50.0% | |
| AGTGCTTGAGGGGGTAAGTT+AGG | - | chr1_4:11088739-11088758 | None:intergenic | 50.0% | |
| !! | AGCCTGTGTTGGCTTTCAGA+AGG | + | chr1_4:11088870-11088889 | Msa0149980:three_prime_UTR | 50.0% |
| ! | TGCCTTCTGAAAGCCAACAC+AGG | - | chr1_4:11088875-11088894 | None:intergenic | 50.0% |
| !! | TGTGTTGGCTTTCAGAAGGC+AGG | + | chr1_4:11088874-11088893 | Msa0149980:three_prime_UTR | 50.0% |
| ! | TTCCGTTGTCGACGGTGTTG+GGG | - | chr1_4:11076963-11076982 | None:intergenic | 55.0% |
| GTTCCGTTGTCGACGGTGTT+GGG | - | chr1_4:11076964-11076983 | None:intergenic | 55.0% | |
| GTTCTGCGAAAAGGGAGACG+CGG | - | chr1_4:11077104-11077123 | None:intergenic | 55.0% | |
| GAACCTTCTGTTGCTCCCTC+CGG | + | chr1_4:11077120-11077139 | Msa0149980:intron | 55.0% | |
| ! | TTTTGCGCCATCTCCGGCAT+CGG | - | chr1_4:11077154-11077173 | None:intergenic | 55.0% |
| TTGCGTTGCTTCAGAGTCGC+CGG | + | chr1_4:11077259-11077278 | Msa0149980:CDS | 55.0% | |
| ! | CCGAGCCTTATCCCACTAAG+TGG | - | chr1_4:11077980-11077999 | None:intergenic | 55.0% |
| GCTTCTCGTAGGGCCAAAGT+TGG | + | chr1_4:11078341-11078360 | Msa0149980:CDS | 55.0% | |
| ! | ATCGGACTAGGGCCCAACTT+TGG | - | chr1_4:11078357-11078376 | None:intergenic | 55.0% |
| CCCAAGCATGGCTACCTGAA+AGG | + | chr1_4:11078580-11078599 | Msa0149980:CDS | 55.0% | |
| ! | GCCTTTCAGGTAGCCATGCT+TGG | - | chr1_4:11078584-11078603 | None:intergenic | 55.0% |
| ATACCTCACGGTTGCTGAGC+TGG | - | chr1_4:11082143-11082162 | None:intergenic | 55.0% | |
| CTTGGGGGGAATCAGTATGG+TGG | + | chr1_4:11083457-11083476 | Msa0149980:CDS | 55.0% | |
| GGTGTGAGCCGAAAGTTGCA+TGG | + | chr1_4:11086155-11086174 | Msa0149980:intron | 55.0% | |
| !! | CAAAAGCGCTGAGGGGTTGA+TGG | - | chr1_4:11086675-11086694 | None:intergenic | 55.0% |
| ! | CATCAACCCCTCAGCGCTTT+TGG | + | chr1_4:11086673-11086692 | Msa0149980:CDS | 55.0% |
| CTCACCGAGTCAACCAGAAG+GGG | - | chr1_4:11086702-11086721 | None:intergenic | 55.0% | |
| GACGAAGTTCAGAACCCCTC+AGG | - | chr1_4:11087237-11087256 | None:intergenic | 55.0% | |
| GCAGACACCTGTTGGGACTT+GGG | - | chr1_4:11087508-11087527 | None:intergenic | 55.0% | |
| TGCAGACACCTGTTGGGACT+TGG | - | chr1_4:11087509-11087528 | None:intergenic | 55.0% | |
| CTCTGCATGCAGACACCTGT+TGG | - | chr1_4:11087516-11087535 | None:intergenic | 55.0% | |
| GACCGTCGCTACTACCTACA+TGG | - | chr1_4:11087733-11087752 | None:intergenic | 55.0% | |
| !! | GCTAGTGTTGGTGGTGGATG+TGG | - | chr1_4:11087805-11087824 | None:intergenic | 55.0% |
| ! | TTGGTTGGCTGCGGAAGACA+CGG | - | chr1_4:11087840-11087859 | None:intergenic | 55.0% |
| !! | GTTGGCTTTCAGAAGGCAGG+TGG | + | chr1_4:11088877-11088896 | Msa0149980:three_prime_UTR | 55.0% |
| TCCCCCAACACCGTCGACAA+CGG | + | chr1_4:11076958-11076977 | Msa0149980:CDS | 60.0% | |
| ! | TCCGTTGTCGACGGTGTTGG+GGG | - | chr1_4:11076962-11076981 | None:intergenic | 60.0% |
| GGTTCCGTTGTCGACGGTGT+TGG | - | chr1_4:11076965-11076984 | None:intergenic | 60.0% | |
| ! | GGGTGAGAGTGTGGTGGAGA+GGG | - | chr1_4:11077035-11077054 | None:intergenic | 60.0% |
| ! | TTGGACGGGTGAGAGTGTGG+TGG | - | chr1_4:11077041-11077060 | None:intergenic | 60.0% |
| CTTGCAATCTCCTGGTCCCG+CGG | + | chr1_4:11077069-11077088 | Msa0149980:intron | 60.0% | |
| TGCGAAAAGGGAGACGCGGA+GGG | - | chr1_4:11077100-11077119 | None:intergenic | 60.0% | |
| GAAACCTCCGATGCCGGAGA+TGG | + | chr1_4:11077144-11077163 | Msa0149980:intron | 60.0% | |
| TTGCTAGGTAGGGGTGGGCA+TGG | + | chr1_4:11079613-11079632 | Msa0149980:intron | 60.0% | |
| AGGTAGGGGTGGGCATGGTT+CGG | + | chr1_4:11079618-11079637 | Msa0149980:intron | 60.0% | |
| AGACCAGCTCAGCAACCGTG+AGG | + | chr1_4:11082137-11082156 | Msa0149980:CDS | 60.0% | |
| ! | TGGTGCCCCCTTTTCTACGC+AGG | + | chr1_4:11082868-11082887 | Msa0149980:intron | 60.0% |
| ! | GGTGCCCCCTTTTCTACGCA+GGG | + | chr1_4:11082869-11082888 | Msa0149980:intron | 60.0% |
| TAGGATGGTTGCACACGCCG+TGG | + | chr1_4:11083376-11083395 | Msa0149980:intron | 60.0% | |
| ! | GCTGCCCCTTCTGGTTGACT+CGG | + | chr1_4:11086695-11086714 | Msa0149980:CDS | 60.0% |
| CAGGAAGCCCAAGTCCCAAC+AGG | + | chr1_4:11087498-11087517 | Msa0149980:intron | 60.0% | |
| AGAAGGCAGGTGGAAGCGAC+CGG | + | chr1_4:11088887-11088906 | Msa0149980:three_prime_UTR | 60.0% | |
| ! | CGGGTGAGAGTGTGGTGGAG+AGG | - | chr1_4:11077036-11077055 | None:intergenic | 65.0% |
| CGCGGGACCAGGAGATTGCA+AGG | - | chr1_4:11077071-11077090 | None:intergenic | 65.0% | |
| CTGCGAAAAGGGAGACGCGG+AGG | - | chr1_4:11077101-11077120 | None:intergenic | 65.0% | |
| TCGCCGGAGGGAGCAACAGA+AGG | - | chr1_4:11077126-11077145 | None:intergenic | 65.0% | |
| GCATCGGAGGTTTCGCCGGA+GGG | - | chr1_4:11077138-11077157 | None:intergenic | 65.0% | |
| TCCGGCGAAACCTCCGATGC+CGG | + | chr1_4:11077138-11077157 | Msa0149980:intron | 65.0% | |
| ! | TCCGGCATCGGAGGTTTCGC+CGG | - | chr1_4:11077142-11077161 | None:intergenic | 65.0% |
| !! | GGGCAGCCAAAAGCGCTGAG+GGG | - | chr1_4:11086682-11086701 | None:intergenic | 65.0% |
| !! | GGGGCAGCCAAAAGCGCTGA+GGG | - | chr1_4:11086683-11086702 | None:intergenic | 65.0% |
| !! | AGGGGCAGCCAAAAGCGCTG+AGG | - | chr1_4:11086684-11086703 | None:intergenic | 65.0% |
| !! | GCGCTTTTGGCTGCCCCTTC+TGG | + | chr1_4:11086686-11086705 | Msa0149980:CDS | 65.0% |
| GTAAGAGGAAGACGCCGGGC+TGG | + | chr1_4:11087584-11087603 | Msa0149980:intron | 65.0% | |
| AGACGCGGAGGGAGTTGCCG+CGG | - | chr1_4:11077089-11077108 | None:intergenic | 70.0% | |
| ! | GGCATCGGAGGTTTCGCCGG+AGG | - | chr1_4:11077139-11077158 | None:intergenic | 70.0% |
| ! | TGCGCCATCTCCGGCATCGG+AGG | - | chr1_4:11077151-11077170 | None:intergenic | 70.0% |
| GGCACATGCAGGTGCAGCCC+AGG | - | chr1_4:11081446-11081465 | None:intergenic | 70.0% | |
| GAGGGAGTTGCCGCGGGACC+AGG | - | chr1_4:11077082-11077101 | None:intergenic | 75.0% | |
| GACGCGGAGGGAGTTGCCGC+GGG | - | chr1_4:11077088-11077107 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 11076955 | 11089137 | 11076955 | ID=Msa0149980;Name=Msa0149980 |
| chr1_4 | mRNA | 11076955 | 11089137 | 11076955 | ID=Msa0149980-mRNA-1;Parent=Msa0149980;Name=Msa0149980-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0.77|0.84|1|0.77|0.89|19|321|649 |
| chr1_4 | exon | 11076955 | 11077054 | 11076955 | ID=Msa0149980-mRNA-1:exon:4618;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11077196 | 11077304 | 11077196 | ID=Msa0149980-mRNA-1:exon:4619;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11078302 | 11078404 | 11078302 | ID=Msa0149980-mRNA-1:exon:4620;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11078510 | 11078620 | 11078510 | ID=Msa0149980-mRNA-1:exon:4621;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11078720 | 11078803 | 11078720 | ID=Msa0149980-mRNA-1:exon:4622;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11081945 | 11082016 | 11081945 | ID=Msa0149980-mRNA-1:exon:4623;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11082102 | 11082158 | 11082102 | ID=Msa0149980-mRNA-1:exon:4624;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11082335 | 11082454 | 11082335 | ID=Msa0149980-mRNA-1:exon:4625;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11082557 | 11082757 | 11082557 | ID=Msa0149980-mRNA-1:exon:4626;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11082890 | 11083000 | 11082890 | ID=Msa0149980-mRNA-1:exon:4627;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11083131 | 11083138 | 11083131 | ID=Msa0149980-mRNA-1:exon:4628;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11083379 | 11083535 | 11083379 | ID=Msa0149980-mRNA-1:exon:4629;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11083835 | 11083936 | 11083835 | ID=Msa0149980-mRNA-1:exon:4630;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11084052 | 11084108 | 11084052 | ID=Msa0149980-mRNA-1:exon:4631;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11084235 | 11084381 | 11084235 | ID=Msa0149980-mRNA-1:exon:4632;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11084508 | 11084578 | 11084508 | ID=Msa0149980-mRNA-1:exon:4633;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11084679 | 11084766 | 11084679 | ID=Msa0149980-mRNA-1:exon:4634;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11086660 | 11086716 | 11086660 | ID=Msa0149980-mRNA-1:exon:4635;Parent=Msa0149980-mRNA-1 |
| chr1_4 | exon | 11088622 | 11089137 | 11088622 | ID=Msa0149980-mRNA-1:exon:4636;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11076955 | 11077054 | 11076955 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11077196 | 11077304 | 11077196 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11078302 | 11078404 | 11078302 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11078510 | 11078620 | 11078510 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11078720 | 11078803 | 11078720 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11081945 | 11082016 | 11081945 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11082102 | 11082158 | 11082102 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11082335 | 11082454 | 11082335 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11082557 | 11082757 | 11082557 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11082890 | 11083000 | 11082890 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11083131 | 11083138 | 11083131 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11083379 | 11083535 | 11083379 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11083835 | 11083936 | 11083835 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11084052 | 11084108 | 11084052 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11084235 | 11084381 | 11084235 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11084508 | 11084578 | 11084508 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11084679 | 11084766 | 11084679 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11086660 | 11086716 | 11086660 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | CDS | 11088622 | 11088816 | 11088622 | ID=Msa0149980-mRNA-1:cds;Parent=Msa0149980-mRNA-1 |
| chr1_4 | three_prime_UTR | 11088817 | 11089137 | 11088817 | ID=Msa0149980-mRNA-1:three_prime_utr;Parent=Msa0149980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
