AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1070810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070810 MtrunA17_Chr7g0253321 99.010 202 2 0 1 202 1 202 3.53e-130 364
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070810 AT3G03920.1 80.921 152 29 0 51 202 51 202 5.25e-66 202
Msa1070810 AT5G18180.1 83.962 106 16 1 51 156 38 142 3.80e-59 184

Find 105 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGACGTGGTGGTGGTTTC+AGG 0.152779 7_2:-67101188 Msa1070810:CDS
AAACTTTAACTTCGGGGTTT+AGG 0.207634 7_2:+67102954 None:intergenic
GGGAAAGTTGATGAAATATT+TGG 0.233909 7_2:-67102468 Msa1070810:CDS
AACTTTAACTTCGGGGTTTA+GGG 0.260157 7_2:+67102955 None:intergenic
GGCCGTGGAGGTGGTGGTTT+TGG 0.280477 7_2:-67101285 Msa1070810:CDS
CCACGGCCGCCACCTCTTGC+AGG 0.283854 7_2:+67102862 None:intergenic
TAGGGTTACAATTGAAGATT+TGG 0.295564 7_2:-67101079 Msa1070810:three_prime_UTR
GAGGACCTCTTCCACCCCTT+GGG 0.305063 7_2:+67101217 None:intergenic
CAGGGGAAGGGGCAGATTCT+AGG 0.306220 7_2:-67101169 Msa1070810:exon
GGAGGACCTCTTCCACCCCT+TGG 0.349525 7_2:+67101216 None:intergenic
TTACCATGGCAGGGTATGAT+AGG 0.350857 7_2:-67100977 Msa1070810:three_prime_UTR
CAACTAATATTACATGATAT+TGG 0.357777 7_2:+67101140 None:intergenic
ATCAAAAGCACAAGTTTAGA+TGG 0.362034 7_2:+67100935 None:intergenic
AGAGGTGGCGGCCGTGGTGG+TGG 0.384933 7_2:-67102856 Msa1070810:CDS
TAATCGTTTCGTTTGGATGA+TGG 0.386896 7_2:-67101108 Msa1070810:three_prime_UTR
GCTAGAGGCAAGAGCTTCCT+AGG 0.395733 7_2:+67102268 None:intergenic
CTGCAAAACATGACTCAGAT+TGG 0.398576 7_2:-67102489 Msa1070810:CDS
CCTGCAAGAGGTGGCGGCCG+TGG 0.400024 7_2:-67102862 Msa1070810:CDS
AGAGGTGGTGGCCGTGGAGG+TGG 0.402289 7_2:-67101261 Msa1070810:CDS
GGTGGTGGTTTCAGGGGAAG+GGG 0.406506 7_2:-67101180 Msa1070810:CDS
TATTTAACTTCTGAATTGAA+TGG 0.410114 7_2:-67101040 Msa1070810:three_prime_UTR
TGTACTTTAATCGTTTCGTT+TGG 0.416142 7_2:-67101115 Msa1070810:three_prime_UTR
CAGAGAGAAACTTTAACTTC+GGG 0.420751 7_2:+67102947 None:intergenic
AGAGGTGGAGGCCGTGGAGG+TGG 0.421064 7_2:-67101294 Msa1070810:CDS
AGCTGAGCTTCAACAATGGC+GGG 0.425235 7_2:+67102923 None:intergenic
TTTGGTAGAGGTGGTGGCCG+TGG 0.427705 7_2:-67101267 Msa1070810:CDS
GTTGCTACTTCATATGCATC+TGG 0.429953 7_2:-67102310 Msa1070810:CDS
GGTGGTAGAGGTGGAGGCCG+TGG 0.431868 7_2:-67101300 Msa1070810:CDS
GTGGTGGTGGTTTCAGGGGA+AGG 0.432062 7_2:-67101182 Msa1070810:CDS
TTCGGCGGTGGACGTGGTGG+TGG 0.435593 7_2:-67102757 Msa1070810:CDS
TATTGCAGGGGACAAGCATC+AGG 0.437663 7_2:-67101321 Msa1070810:intron
GGTGGAGGCCGTGGAGGTGG+TGG 0.442100 7_2:-67101291 Msa1070810:CDS
GCAGAGAGAAACTTTAACTT+CGG 0.446895 7_2:+67102946 None:intergenic
CCACCACCACGTCCACCTCT+TGG 0.448869 7_2:+67101195 None:intergenic
GGTGGTGGCCGTGGAGGTGG+TGG 0.449672 7_2:-67101258 Msa1070810:CDS
GGTCGATTCGGCGGTGGACG+TGG 0.450036 7_2:-67102763 Msa1070810:CDS
TACAATTGAAGATTTGGTGC+TGG 0.455766 7_2:-67101073 Msa1070810:three_prime_UTR
CACGGCCGCCACCTCTTGCA+GGG 0.459887 7_2:+67102863 None:intergenic
GGACGTGGTGGTGGTCGATT+CGG 0.462851 7_2:-67102775 Msa1070810:CDS
GGCGGTGGACGTGGTGGTGG+AGG 0.463762 7_2:-67102754 Msa1070810:CDS
TGGTGGTGGTTTCAGGGGAA+GGG 0.471183 7_2:-67101181 Msa1070810:CDS
TGCAAAACATGACTCAGATT+GGG 0.474986 7_2:-67102488 Msa1070810:CDS
GGTGGACGTGGTGGTGGAGG+TGG 0.479988 7_2:-67102751 Msa1070810:CDS
TGGACGTGGTGGTGGTTTCA+GGG 0.482520 7_2:-67101187 Msa1070810:CDS
CCAAGAGGTGGACGTGGTGG+TGG 0.483436 7_2:-67101195 Msa1070810:CDS
GGACCTCCCTCCGAAGTTGT+AGG 0.483894 7_2:-67102715 Msa1070810:intron
CCAGAGTGATGGAAGTAGGT+TGG 0.494029 7_2:+67100896 None:intergenic
AGGACCTCTTCCACCCCTTG+GGG 0.496542 7_2:+67101218 None:intergenic
TTTGGATGATGGATCACATA+GGG 0.505820 7_2:-67101097 Msa1070810:three_prime_UTR
GGCCGTGGTGGTGGATTCAG+AGG 0.507562 7_2:-67102847 Msa1070810:CDS
GAAACTCACAGATTCATTGA+TGG 0.508035 7_2:+67102443 None:intergenic
TGTTATCAACTTACCATGGC+AGG 0.511854 7_2:-67100987 Msa1070810:three_prime_UTR
CCACCACGTCCACCTCTTGG+AGG 0.512302 7_2:+67101198 None:intergenic
GGACAAGCATCAGGTGGTAG+AGG 0.524486 7_2:-67101312 Msa1070810:CDS
TTTCTATTAAAATGATGGAA+GGG 0.525814 7_2:-67102336 Msa1070810:CDS
AGGGGAAGGGGCAGATTCTA+GGG 0.527082 7_2:-67101168 Msa1070810:exon
GCATCAGGTGGTAGAGGTGG+AGG 0.530555 7_2:-67101306 Msa1070810:CDS
ACGTTTATCCATGCTTGTGA+AGG 0.531931 7_2:-67102570 Msa1070810:CDS
GCAAGAGGTGGCGGCCGTGG+TGG 0.532210 7_2:-67102859 Msa1070810:CDS
CAAGCATCAGGTGGTAGAGG+TGG 0.537811 7_2:-67101309 Msa1070810:CDS
GGATTCAGAGGTGGCCGAGA+TGG 0.541387 7_2:-67102835 Msa1070810:CDS
TTCAGAGGTGGCCGAGATGG+TGG 0.544595 7_2:-67102832 Msa1070810:CDS
GGATTCAGAGGTGGTCGTGA+TGG 0.545084 7_2:-67102811 Msa1070810:CDS
GGTGGTGGTCGATTCGGCGG+TGG 0.547225 7_2:-67102769 Msa1070810:CDS
CAGCATCTCCTTCACAAGCA+TGG 0.551580 7_2:+67102562 None:intergenic
GACCCACGAACCTACAACTT+CGG 0.554912 7_2:+67102705 None:intergenic
GGACCTCTTCCACCCCTTGG+GGG 0.557362 7_2:+67101219 None:intergenic
GGTAGAGGTGGAGGCCGTGG+AGG 0.559108 7_2:-67101297 Msa1070810:CDS
AGAGGTGGTCGTGATGGAGG+AGG 0.560037 7_2:-67102805 Msa1070810:CDS
GGGTATGATAGGGTAGATTG+AGG 0.561919 7_2:-67100966 Msa1070810:three_prime_UTR
TTCAGAGGTGGTCGTGATGG+AGG 0.569077 7_2:-67102808 Msa1070810:CDS
ACGGCCGCCACCTCTTGCAG+GGG 0.569761 7_2:+67102864 None:intergenic
CGTGGTGGTGGTCGATTCGG+CGG 0.575172 7_2:-67102772 Msa1070810:CDS
AAACTCACAGATTCATTGAT+GGG 0.576692 7_2:+67102444 None:intergenic
GGCCGAGATGGTGGATTCAG+AGG 0.581009 7_2:-67102823 Msa1070810:CDS
GGTAGAGGTGGTGGCCGTGG+AGG 0.585512 7_2:-67101264 Msa1070810:CDS
GGAGGTGGATTTCGTGATGA+AGG 0.587672 7_2:-67102736 Msa1070810:CDS
GTGAGAACATACTTCGGCTG+AGG 0.591544 7_2:+67102235 None:intergenic
TACCCTATCATACCCTGCCA+TGG 0.595191 7_2:+67100974 None:intergenic
TACCATGGCAGGGTATGATA+GGG 0.595564 7_2:-67100976 Msa1070810:three_prime_UTR
CACGAAAACCACCACCTCCA+CGG 0.595827 7_2:+67101250 None:intergenic
GTTTGGATGATGGATCACAT+AGG 0.597503 7_2:-67101098 Msa1070810:three_prime_UTR
GAGCTGAGCTTCAACAATGG+CGG 0.600723 7_2:+67102922 None:intergenic
CGATTCGGCGGTGGACGTGG+TGG 0.605050 7_2:-67102760 Msa1070810:CDS
CCACGAACCTACAACTTCGG+AGG 0.606785 7_2:+67102708 None:intergenic
CCTCCAAGAGGTGGACGTGG+TGG 0.609010 7_2:-67101198 Msa1070810:CDS
CACGAACCTACAACTTCGGA+GGG 0.610254 7_2:+67102709 None:intergenic
TGTGAGCTGAGCTTCAACAA+TGG 0.617450 7_2:+67102919 None:intergenic
GGAAGAGGTCCTCCAAGAGG+TGG 0.617947 7_2:-67101207 Msa1070810:CDS
GGTCCTCCAAGAGGTGGACG+TGG 0.619296 7_2:-67101201 Msa1070810:CDS
CGAGATGGTGGATTCAGAGG+TGG 0.625804 7_2:-67102820 Msa1070810:CDS
CACCTCTGAATCCACCATCT+CGG 0.628054 7_2:+67102821 None:intergenic
CTAGAGGCAAGAGCTTCCTA+GGG 0.630481 7_2:+67102269 None:intergenic
TACCAAAACCACCACCTCCA+CGG 0.632501 7_2:+67101283 None:intergenic
GGACGTGGTGGTGGTTTCAG+GGG 0.633942 7_2:-67101186 Msa1070810:CDS
GTTATCAACTTACCATGGCA+GGG 0.637073 7_2:-67100986 Msa1070810:three_prime_UTR
CACATGTTATCAACTTACCA+TGG 0.637177 7_2:-67100991 Msa1070810:three_prime_UTR
TGAGGAAGAAATCTTGCTAG+AGG 0.638685 7_2:+67102253 None:intergenic
CGTGGTGGTGGATTCAGAGG+TGG 0.644993 7_2:-67102844 Msa1070810:CDS
GAACCTACAACTTCGGAGGG+AGG 0.658354 7_2:+67102712 None:intergenic
GCTGAGCTTCAACAATGGCG+GGG 0.660274 7_2:+67102924 None:intergenic
GGTGGAAGAGGTCCTCCAAG+AGG 0.663197 7_2:-67101210 Msa1070810:CDS
TGCAGGGGACAAGCATCAGG+TGG 0.672433 7_2:-67101318 Msa1070810:intron
AGAGAGAAACTTTAACTTCG+GGG 0.680645 7_2:+67102948 None:intergenic
CACCTCTGAATCCACCACCA+CGG 0.697043 7_2:+67102845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTCATTTTTTCAGTAAAA+CGG + chr7_2:67102030-67102049 None:intergenic 15.0%
!!! CAAATATCAAAAACTAATTT+TGG + chr7_2:67102221-67102240 None:intergenic 15.0%
!!! TTTTTGATATTTGCTATATA+CGG - chr7_2:67102228-67102247 Msa1070810:intron 15.0%
!!! CTAATATCAAAAACTAATTT+TGG + chr7_2:67102347-67102366 None:intergenic 15.0%
!!! TATTCATTTTTTCAGTAAAA+CGG + chr7_2:67102030-67102049 None:intergenic 15.0%
!!! CAAATATCAAAAACTAATTT+TGG + chr7_2:67102221-67102240 None:intergenic 15.0%
!!! TTTTTGATATTTGCTATATA+CGG - chr7_2:67102228-67102247 Msa1070810:intron 15.0%
!!! CTAATATCAAAAACTAATTT+TGG + chr7_2:67102347-67102366 None:intergenic 15.0%
!!! AAAAAATGGAATTTTCTCAT+TGG + chr7_2:67101350-67101369 None:intergenic 20.0%
!!! TAAATAGGAGCATTAAAAAA+TGG + chr7_2:67101364-67101383 None:intergenic 20.0%
!!! TCTTATATGTTTTGTTGAAA+TGG - chr7_2:67101476-67101495 Msa1070810:intron 20.0%
!!! CTTATATGTTTTGTTGAAAT+GGG - chr7_2:67101477-67101496 Msa1070810:intron 20.0%
!!! GTACTTTTCTATTAAAATGA+TGG - chr7_2:67101533-67101552 Msa1070810:intron 20.0%
!!! TTTTCTATTAAAATGATGGA+AGG - chr7_2:67101537-67101556 Msa1070810:intron 20.0%
!!! TTTCTATTAAAATGATGGAA+GGG - chr7_2:67101538-67101557 Msa1070810:intron 20.0%
!! CATAAACAAGGAAATTAATT+AGG + chr7_2:67101744-67101763 None:intergenic 20.0%
!! TACATCAGATAAAAATAAGA+AGG - chr7_2:67102292-67102311 Msa1070810:CDS 20.0%
!! ACATCAGATAAAAATAAGAA+GGG - chr7_2:67102293-67102312 Msa1070810:CDS 20.0%
!!! ATTTTTTATTGGCTTTTGAA+AGG - chr7_2:67102490-67102509 Msa1070810:CDS 20.0%
!!! TTTTTTATTGGCTTTTGAAA+GGG - chr7_2:67102491-67102510 Msa1070810:CDS 20.0%
!! CAACTAATATTACATGATAT+TGG + chr7_2:67102737-67102756 None:intergenic 20.0%
!!! TATTTAACTTCTGAATTGAA+TGG - chr7_2:67102834-67102853 Msa1070810:CDS 20.0%
!!! AAAAAATGGAATTTTCTCAT+TGG + chr7_2:67101350-67101369 None:intergenic 20.0%
!!! TAAATAGGAGCATTAAAAAA+TGG + chr7_2:67101364-67101383 None:intergenic 20.0%
!!! TCTTATATGTTTTGTTGAAA+TGG - chr7_2:67101476-67101495 Msa1070810:intron 20.0%
!!! CTTATATGTTTTGTTGAAAT+GGG - chr7_2:67101477-67101496 Msa1070810:intron 20.0%
!!! GTACTTTTCTATTAAAATGA+TGG - chr7_2:67101533-67101552 Msa1070810:intron 20.0%
!!! TTTTCTATTAAAATGATGGA+AGG - chr7_2:67101537-67101556 Msa1070810:intron 20.0%
!!! TTTCTATTAAAATGATGGAA+GGG - chr7_2:67101538-67101557 Msa1070810:intron 20.0%
!! CATAAACAAGGAAATTAATT+AGG + chr7_2:67101744-67101763 None:intergenic 20.0%
!! TACATCAGATAAAAATAAGA+AGG - chr7_2:67102292-67102311 Msa1070810:CDS 20.0%
!! ACATCAGATAAAAATAAGAA+GGG - chr7_2:67102293-67102312 Msa1070810:CDS 20.0%
!!! ATTTTTTATTGGCTTTTGAA+AGG - chr7_2:67102490-67102509 Msa1070810:CDS 20.0%
!!! TTTTTTATTGGCTTTTGAAA+GGG - chr7_2:67102491-67102510 Msa1070810:CDS 20.0%
!! CAACTAATATTACATGATAT+TGG + chr7_2:67102737-67102756 None:intergenic 20.0%
!!! TATTTAACTTCTGAATTGAA+TGG - chr7_2:67102834-67102853 Msa1070810:CDS 20.0%
!! ACTTAGACAGGTTAATTTTA+AGG + chr7_2:67101667-67101686 None:intergenic 25.0%
!! ATTGTACAGTTGATGTTAAA+TGG - chr7_2:67101687-67101706 Msa1070810:intron 25.0%
!! TTGTACAGTTGATGTTAAAT+GGG - chr7_2:67101688-67101707 Msa1070810:intron 25.0%
! ATACTTGTTTGTTTGTTCAA+AGG - chr7_2:67102083-67102102 Msa1070810:intron 25.0%
! TCAAAGGATTCTTATTGTTA+TGG - chr7_2:67102099-67102118 Msa1070810:intron 25.0%
! ATCTGATGTAACATCAATTA+GGG + chr7_2:67102282-67102301 None:intergenic 25.0%
! TATCTGATGTAACATCAATT+AGG + chr7_2:67102283-67102302 None:intergenic 25.0%
! CATCAGATAAAAATAAGAAG+GGG - chr7_2:67102294-67102313 Msa1070810:CDS 25.0%
! CATACAAAACAATTAACACA+AGG + chr7_2:67102416-67102435 None:intergenic 25.0%
! AATAAATTGTTGTATGCAGT+TGG - chr7_2:67102454-67102473 Msa1070810:CDS 25.0%
!!! CTTTGCTTGGAATTTTTTAT+TGG - chr7_2:67102479-67102498 Msa1070810:CDS 25.0%
! AATTGACTGATTATTATTGC+AGG - chr7_2:67102539-67102558 Msa1070810:CDS 25.0%
! ATTGACTGATTATTATTGCA+GGG - chr7_2:67102540-67102559 Msa1070810:CDS 25.0%
!! ACTTAGACAGGTTAATTTTA+AGG + chr7_2:67101667-67101686 None:intergenic 25.0%
!! ATTGTACAGTTGATGTTAAA+TGG - chr7_2:67101687-67101706 Msa1070810:intron 25.0%
!! TTGTACAGTTGATGTTAAAT+GGG - chr7_2:67101688-67101707 Msa1070810:intron 25.0%
! ATACTTGTTTGTTTGTTCAA+AGG - chr7_2:67102083-67102102 Msa1070810:intron 25.0%
! TCAAAGGATTCTTATTGTTA+TGG - chr7_2:67102099-67102118 Msa1070810:intron 25.0%
! ATCTGATGTAACATCAATTA+GGG + chr7_2:67102282-67102301 None:intergenic 25.0%
! TATCTGATGTAACATCAATT+AGG + chr7_2:67102283-67102302 None:intergenic 25.0%
! CATCAGATAAAAATAAGAAG+GGG - chr7_2:67102294-67102313 Msa1070810:CDS 25.0%
! CATACAAAACAATTAACACA+AGG + chr7_2:67102416-67102435 None:intergenic 25.0%
! AATAAATTGTTGTATGCAGT+TGG - chr7_2:67102454-67102473 Msa1070810:CDS 25.0%
!!! CTTTGCTTGGAATTTTTTAT+TGG - chr7_2:67102479-67102498 Msa1070810:CDS 25.0%
! AATTGACTGATTATTATTGC+AGG - chr7_2:67102539-67102558 Msa1070810:CDS 25.0%
! ATTGACTGATTATTATTGCA+GGG - chr7_2:67102540-67102559 Msa1070810:CDS 25.0%
!! GTTTAATTTGATGTTTGCAG+AGG - chr7_2:67101276-67101295 Msa1070810:CDS 30.0%
! GTCATGTTTTGCAGATAAAT+AGG + chr7_2:67101379-67101398 None:intergenic 30.0%
!! GGGAAAGTTGATGAAATATT+TGG - chr7_2:67101406-67101425 Msa1070810:intron 30.0%
AAACTCACAGATTCATTGAT+GGG + chr7_2:67101433-67101452 None:intergenic 30.0%
! AATTTCCTTGTTTATGTTCG+TGG - chr7_2:67101748-67101767 Msa1070810:intron 30.0%
! CTATTTCTTGATTGCTATGT+TGG - chr7_2:67101802-67101821 Msa1070810:intron 30.0%
!! ATGTCTAATTTTGAGTGAGA+GGG - chr7_2:67102153-67102172 Msa1070810:intron 30.0%
CAATTAACACAAGGAAATGT+GGG + chr7_2:67102407-67102426 None:intergenic 30.0%
ACAATTAACACAAGGAAATG+TGG + chr7_2:67102408-67102427 None:intergenic 30.0%
TTGACTGATTATTATTGCAG+GGG - chr7_2:67102541-67102560 Msa1070810:CDS 30.0%
TGTACTTTAATCGTTTCGTT+TGG - chr7_2:67102759-67102778 Msa1070810:CDS 30.0%
TAGGGTTACAATTGAAGATT+TGG - chr7_2:67102795-67102814 Msa1070810:CDS 30.0%
! ATCAAAAGCACAAGTTTAGA+TGG + chr7_2:67102942-67102961 None:intergenic 30.0%
!! GTTTAATTTGATGTTTGCAG+AGG - chr7_2:67101276-67101295 Msa1070810:CDS 30.0%
! GTCATGTTTTGCAGATAAAT+AGG + chr7_2:67101379-67101398 None:intergenic 30.0%
!! GGGAAAGTTGATGAAATATT+TGG - chr7_2:67101406-67101425 Msa1070810:intron 30.0%
AAACTCACAGATTCATTGAT+GGG + chr7_2:67101433-67101452 None:intergenic 30.0%
! AATTTCCTTGTTTATGTTCG+TGG - chr7_2:67101748-67101767 Msa1070810:intron 30.0%
! CTATTTCTTGATTGCTATGT+TGG - chr7_2:67101802-67101821 Msa1070810:intron 30.0%
!! ATGTCTAATTTTGAGTGAGA+GGG - chr7_2:67102153-67102172 Msa1070810:intron 30.0%
CAATTAACACAAGGAAATGT+GGG + chr7_2:67102407-67102426 None:intergenic 30.0%
ACAATTAACACAAGGAAATG+TGG + chr7_2:67102408-67102427 None:intergenic 30.0%
TTGACTGATTATTATTGCAG+GGG - chr7_2:67102541-67102560 Msa1070810:CDS 30.0%
TGTACTTTAATCGTTTCGTT+TGG - chr7_2:67102759-67102778 Msa1070810:CDS 30.0%
TAGGGTTACAATTGAAGATT+TGG - chr7_2:67102795-67102814 Msa1070810:CDS 30.0%
! ATCAAAAGCACAAGTTTAGA+TGG + chr7_2:67102942-67102961 None:intergenic 30.0%
! AACTTTAACTTCGGGGTTTA+GGG + chr7_2:67100922-67100941 None:intergenic 35.0%
! AAACTTTAACTTCGGGGTTT+AGG + chr7_2:67100923-67100942 None:intergenic 35.0%
! AGAGAGAAACTTTAACTTCG+GGG + chr7_2:67100929-67100948 None:intergenic 35.0%
! CAGAGAGAAACTTTAACTTC+GGG + chr7_2:67100930-67100949 None:intergenic 35.0%
! GCAGAGAGAAACTTTAACTT+CGG + chr7_2:67100931-67100950 None:intergenic 35.0%
TGCAAAACATGACTCAGATT+GGG - chr7_2:67101386-67101405 Msa1070810:intron 35.0%
GAAACTCACAGATTCATTGA+TGG + chr7_2:67101434-67101453 None:intergenic 35.0%
ATCTGTGAGTTTCTCTTTGT+TGG - chr7_2:67101441-67101460 Msa1070810:intron 35.0%
! ACAAGTTTTACATTGACCCT+AGG - chr7_2:67101589-67101608 Msa1070810:intron 35.0%
CAACTGTACAATACTTAGAC+AGG + chr7_2:67101679-67101698 None:intergenic 35.0%
CATTACCACGAACATAAACA+AGG + chr7_2:67101756-67101775 None:intergenic 35.0%
GCAGATTACATCAAGACAAA+AGG + chr7_2:67102056-67102075 None:intergenic 35.0%
AAAATTAGACATCTGCAGCA+TGG + chr7_2:67102145-67102164 None:intergenic 35.0%
!! GATGTCTAATTTTGAGTGAG+AGG - chr7_2:67102152-67102171 Msa1070810:intron 35.0%
!! TGAAAGGGTATTACAATCGA+TGG - chr7_2:67102506-67102525 Msa1070810:CDS 35.0%
TAATCGTTTCGTTTGGATGA+TGG - chr7_2:67102766-67102785 Msa1070810:CDS 35.0%
!! TTTGGATGATGGATCACATA+GGG - chr7_2:67102777-67102796 Msa1070810:CDS 35.0%
!! TACAATTGAAGATTTGGTGC+TGG - chr7_2:67102801-67102820 Msa1070810:CDS 35.0%
CACATGTTATCAACTTACCA+TGG - chr7_2:67102883-67102902 Msa1070810:exon 35.0%
!! TTAGGGTTTTAGTGATGAAC+TGG + chr7_2:67100905-67100924 None:intergenic 35.0%
! AACTTTAACTTCGGGGTTTA+GGG + chr7_2:67100922-67100941 None:intergenic 35.0%
! AAACTTTAACTTCGGGGTTT+AGG + chr7_2:67100923-67100942 None:intergenic 35.0%
! AGAGAGAAACTTTAACTTCG+GGG + chr7_2:67100929-67100948 None:intergenic 35.0%
! CAGAGAGAAACTTTAACTTC+GGG + chr7_2:67100930-67100949 None:intergenic 35.0%
! GCAGAGAGAAACTTTAACTT+CGG + chr7_2:67100931-67100950 None:intergenic 35.0%
TGCAAAACATGACTCAGATT+GGG - chr7_2:67101386-67101405 Msa1070810:intron 35.0%
GAAACTCACAGATTCATTGA+TGG + chr7_2:67101434-67101453 None:intergenic 35.0%
ATCTGTGAGTTTCTCTTTGT+TGG - chr7_2:67101441-67101460 Msa1070810:intron 35.0%
! ACAAGTTTTACATTGACCCT+AGG - chr7_2:67101589-67101608 Msa1070810:intron 35.0%
CAACTGTACAATACTTAGAC+AGG + chr7_2:67101679-67101698 None:intergenic 35.0%
CATTACCACGAACATAAACA+AGG + chr7_2:67101756-67101775 None:intergenic 35.0%
GCAGATTACATCAAGACAAA+AGG + chr7_2:67102056-67102075 None:intergenic 35.0%
AAAATTAGACATCTGCAGCA+TGG + chr7_2:67102145-67102164 None:intergenic 35.0%
!! GATGTCTAATTTTGAGTGAG+AGG - chr7_2:67102152-67102171 Msa1070810:intron 35.0%
!! TGAAAGGGTATTACAATCGA+TGG - chr7_2:67102506-67102525 Msa1070810:CDS 35.0%
TAATCGTTTCGTTTGGATGA+TGG - chr7_2:67102766-67102785 Msa1070810:CDS 35.0%
!! TTTGGATGATGGATCACATA+GGG - chr7_2:67102777-67102796 Msa1070810:CDS 35.0%
!! TACAATTGAAGATTTGGTGC+TGG - chr7_2:67102801-67102820 Msa1070810:CDS 35.0%
CACATGTTATCAACTTACCA+TGG - chr7_2:67102883-67102902 Msa1070810:exon 35.0%
ACGTTTATCCATGCTTGTGA+AGG - chr7_2:67101304-67101323 Msa1070810:CDS 40.0%
CTGCAAAACATGACTCAGAT+TGG - chr7_2:67101385-67101404 Msa1070810:intron 40.0%
! GTTGCTACTTCATATGCATC+TGG - chr7_2:67101564-67101583 Msa1070810:intron 40.0%
TGAGGAAGAAATCTTGCTAG+AGG + chr7_2:67101624-67101643 None:intergenic 40.0%
AAGGCAGTGAGAACATACTT+CGG + chr7_2:67101648-67101667 None:intergenic 40.0%
CAGTTCACACATTCTTCACA+TGG + chr7_2:67101892-67101911 None:intergenic 40.0%
!!! TTTTGAGTGAGAGGGTGTTA+AGG - chr7_2:67102161-67102180 Msa1070810:intron 40.0%
ACATCAATTAGGGACAGTAC+AGG + chr7_2:67102272-67102291 None:intergenic 40.0%
TAACACAAGGAAATGTGGGA+CGG + chr7_2:67102403-67102422 None:intergenic 40.0%
TATGCAGTTGGATCTTTGCT+TGG - chr7_2:67102466-67102485 Msa1070810:CDS 40.0%
!! GTTTGGATGATGGATCACAT+AGG - chr7_2:67102776-67102795 Msa1070810:CDS 40.0%
TGTTATCAACTTACCATGGC+AGG - chr7_2:67102887-67102906 Msa1070810:exon 40.0%
GTTATCAACTTACCATGGCA+GGG - chr7_2:67102888-67102907 Msa1070810:exon 40.0%
ACGTTTATCCATGCTTGTGA+AGG - chr7_2:67101304-67101323 Msa1070810:CDS 40.0%
CTGCAAAACATGACTCAGAT+TGG - chr7_2:67101385-67101404 Msa1070810:intron 40.0%
! GTTGCTACTTCATATGCATC+TGG - chr7_2:67101564-67101583 Msa1070810:intron 40.0%
TGAGGAAGAAATCTTGCTAG+AGG + chr7_2:67101624-67101643 None:intergenic 40.0%
AAGGCAGTGAGAACATACTT+CGG + chr7_2:67101648-67101667 None:intergenic 40.0%
CAGTTCACACATTCTTCACA+TGG + chr7_2:67101892-67101911 None:intergenic 40.0%
!!! TTTTGAGTGAGAGGGTGTTA+AGG - chr7_2:67102161-67102180 Msa1070810:intron 40.0%
ACATCAATTAGGGACAGTAC+AGG + chr7_2:67102272-67102291 None:intergenic 40.0%
TAACACAAGGAAATGTGGGA+CGG + chr7_2:67102403-67102422 None:intergenic 40.0%
TATGCAGTTGGATCTTTGCT+TGG - chr7_2:67102466-67102485 Msa1070810:CDS 40.0%
!! GTTTGGATGATGGATCACAT+AGG - chr7_2:67102776-67102795 Msa1070810:CDS 40.0%
TGTTATCAACTTACCATGGC+AGG - chr7_2:67102887-67102906 Msa1070810:exon 40.0%
GTTATCAACTTACCATGGCA+GGG - chr7_2:67102888-67102907 Msa1070810:exon 40.0%
TGTGAGCTGAGCTTCAACAA+TGG + chr7_2:67100958-67100977 None:intergenic 45.0%
GGTTACACTCTAGCATGTAG+AGG + chr7_2:67102376-67102395 None:intergenic 45.0%
TTACCATGGCAGGGTATGAT+AGG - chr7_2:67102897-67102916 Msa1070810:five_prime_UTR 45.0%
TACCATGGCAGGGTATGATA+GGG - chr7_2:67102898-67102917 Msa1070810:five_prime_UTR 45.0%
GGGTATGATAGGGTAGATTG+AGG - chr7_2:67102908-67102927 Msa1070810:five_prime_UTR 45.0%
TGTGAGCTGAGCTTCAACAA+TGG + chr7_2:67100958-67100977 None:intergenic 45.0%
GGTTACACTCTAGCATGTAG+AGG + chr7_2:67102376-67102395 None:intergenic 45.0%
TTACCATGGCAGGGTATGAT+AGG - chr7_2:67102897-67102916 Msa1070810:five_prime_UTR 45.0%
TACCATGGCAGGGTATGATA+GGG - chr7_2:67102898-67102917 Msa1070810:five_prime_UTR 45.0%
GGGTATGATAGGGTAGATTG+AGG - chr7_2:67102908-67102927 Msa1070810:five_prime_UTR 45.0%
AGCTGAGCTTCAACAATGGC+GGG + chr7_2:67100954-67100973 None:intergenic 50.0%
GAGCTGAGCTTCAACAATGG+CGG + chr7_2:67100955-67100974 None:intergenic 50.0%
TGCAGGGGGTCTCATTGTTT+GGG + chr7_2:67100998-67101017 None:intergenic 50.0%
TTGCAGGGGGTCTCATTGTT+TGG + chr7_2:67100999-67101018 None:intergenic 50.0%
CACCTCTGAATCCACCATCT+CGG + chr7_2:67101056-67101075 None:intergenic 50.0%
! GGAGGTGGATTTCGTGATGA+AGG - chr7_2:67101138-67101157 Msa1070810:three_prime_UTR 50.0%
CACGAACCTACAACTTCGGA+GGG + chr7_2:67101168-67101187 None:intergenic 50.0%
CTCCGAAGTTGTAGGTTCGT+GGG - chr7_2:67101167-67101186 Msa1070810:exon 50.0%
GACCCACGAACCTACAACTT+CGG + chr7_2:67101172-67101191 None:intergenic 50.0%
CAGCATCTCCTTCACAAGCA+TGG + chr7_2:67101315-67101334 None:intergenic 50.0%
CTAGAGGCAAGAGCTTCCTA+GGG + chr7_2:67101608-67101627 None:intergenic 50.0%
GTGAGAACATACTTCGGCTG+AGG + chr7_2:67101642-67101661 None:intergenic 50.0%
!! AGTGAGAGGGTGTTAAGGAG+AGG - chr7_2:67102166-67102185 Msa1070810:intron 50.0%
!! AGAGGGTGTTAAGGAGAGGT+GGG - chr7_2:67102170-67102189 Msa1070810:intron 50.0%
AAGGAAATGTGGGACGGTAC+AGG + chr7_2:67102397-67102416 None:intergenic 50.0%
TATTGCAGGGGACAAGCATC+AGG - chr7_2:67102553-67102572 Msa1070810:CDS 50.0%
TACCAAAACCACCACCTCCA+CGG + chr7_2:67102594-67102613 None:intergenic 50.0%
!! AGGTGGTGGTTTTCGTGGAA+GGG - chr7_2:67102630-67102649 Msa1070810:intron 50.0%
TACCCTATCATACCCTGCCA+TGG + chr7_2:67102903-67102922 None:intergenic 50.0%
AGCTGAGCTTCAACAATGGC+GGG + chr7_2:67100954-67100973 None:intergenic 50.0%
GAGCTGAGCTTCAACAATGG+CGG + chr7_2:67100955-67100974 None:intergenic 50.0%
TGCAGGGGGTCTCATTGTTT+GGG + chr7_2:67100998-67101017 None:intergenic 50.0%
TTGCAGGGGGTCTCATTGTT+TGG + chr7_2:67100999-67101018 None:intergenic 50.0%
CACCTCTGAATCCACCATCT+CGG + chr7_2:67101056-67101075 None:intergenic 50.0%
! GGAGGTGGATTTCGTGATGA+AGG - chr7_2:67101138-67101157 Msa1070810:three_prime_UTR 50.0%
CACGAACCTACAACTTCGGA+GGG + chr7_2:67101168-67101187 None:intergenic 50.0%
CTCCGAAGTTGTAGGTTCGT+GGG - chr7_2:67101167-67101186 Msa1070810:exon 50.0%
GACCCACGAACCTACAACTT+CGG + chr7_2:67101172-67101191 None:intergenic 50.0%
CAGCATCTCCTTCACAAGCA+TGG + chr7_2:67101315-67101334 None:intergenic 50.0%
CTAGAGGCAAGAGCTTCCTA+GGG + chr7_2:67101608-67101627 None:intergenic 50.0%
GTGAGAACATACTTCGGCTG+AGG + chr7_2:67101642-67101661 None:intergenic 50.0%
!! AGTGAGAGGGTGTTAAGGAG+AGG - chr7_2:67102166-67102185 Msa1070810:intron 50.0%
!! AGAGGGTGTTAAGGAGAGGT+GGG - chr7_2:67102170-67102189 Msa1070810:intron 50.0%
AAGGAAATGTGGGACGGTAC+AGG + chr7_2:67102397-67102416 None:intergenic 50.0%
TATTGCAGGGGACAAGCATC+AGG - chr7_2:67102553-67102572 Msa1070810:CDS 50.0%
TACCAAAACCACCACCTCCA+CGG + chr7_2:67102594-67102613 None:intergenic 50.0%
!! AGGTGGTGGTTTTCGTGGAA+GGG - chr7_2:67102630-67102649 Msa1070810:intron 50.0%
TACCCTATCATACCCTGCCA+TGG + chr7_2:67102903-67102922 None:intergenic 50.0%
GCTGAGCTTCAACAATGGCG+GGG + chr7_2:67100953-67100972 None:intergenic 55.0%
ACAATGAGACCCCCTGCAAG+AGG - chr7_2:67101000-67101019 Msa1070810:three_prime_UTR 55.0%
CACCTCTGAATCCACCACCA+CGG + chr7_2:67101032-67101051 None:intergenic 55.0%
!! CGAGATGGTGGATTCAGAGG+TGG - chr7_2:67101054-67101073 Msa1070810:three_prime_UTR 55.0%
GGATTCAGAGGTGGTCGTGA+TGG - chr7_2:67101063-67101082 Msa1070810:three_prime_UTR 55.0%
TTCAGAGGTGGTCGTGATGG+AGG - chr7_2:67101066-67101085 Msa1070810:three_prime_UTR 55.0%
!! CGTGATGGAGGAGGTTTTCG+TGG - chr7_2:67101078-67101097 Msa1070810:three_prime_UTR 55.0%
GAACCTACAACTTCGGAGGG+AGG + chr7_2:67101165-67101184 None:intergenic 55.0%
CCACGAACCTACAACTTCGG+AGG + chr7_2:67101169-67101188 None:intergenic 55.0%
CCTCCGAAGTTGTAGGTTCG+TGG - chr7_2:67101166-67101185 Msa1070810:exon 55.0%
GCTAGAGGCAAGAGCTTCCT+AGG + chr7_2:67101609-67101628 None:intergenic 55.0%
!! GAGAGGGTGTTAAGGAGAGG+TGG - chr7_2:67102169-67102188 Msa1070810:intron 55.0%
GGACAAGCATCAGGTGGTAG+AGG - chr7_2:67102562-67102581 Msa1070810:CDS 55.0%
CAAGCATCAGGTGGTAGAGG+TGG - chr7_2:67102565-67102584 Msa1070810:CDS 55.0%
!!! GGAGGTGGTGGTTTTGGTAG+AGG - chr7_2:67102595-67102614 Msa1070810:intron 55.0%
!!! GGTGGTGGTTTTGGTAGAGG+TGG - chr7_2:67102598-67102617 Msa1070810:intron 55.0%
!!! GGTGGTTTTGGTAGAGGTGG+TGG - chr7_2:67102601-67102620 Msa1070810:intron 55.0%
CACGAAAACCACCACCTCCA+CGG + chr7_2:67102627-67102646 None:intergenic 55.0%
!! GAGGTGGTGGTTTTCGTGGA+AGG - chr7_2:67102629-67102648 Msa1070810:intron 55.0%
!! GGTGGTGGTTTTCGTGGAAG+GGG - chr7_2:67102631-67102650 Msa1070810:intron 55.0%
!! TGGACGTGGTGGTGGTTTCA+GGG - chr7_2:67102687-67102706 Msa1070810:intron 55.0%
!! TGGTGGTGGTTTCAGGGGAA+GGG - chr7_2:67102693-67102712 Msa1070810:intron 55.0%
AGGGGAAGGGGCAGATTCTA+GGG - chr7_2:67102706-67102725 Msa1070810:intron 55.0%
GCTGAGCTTCAACAATGGCG+GGG + chr7_2:67100953-67100972 None:intergenic 55.0%
ACAATGAGACCCCCTGCAAG+AGG - chr7_2:67101000-67101019 Msa1070810:three_prime_UTR 55.0%
CACCTCTGAATCCACCACCA+CGG + chr7_2:67101032-67101051 None:intergenic 55.0%
!! CGAGATGGTGGATTCAGAGG+TGG - chr7_2:67101054-67101073 Msa1070810:three_prime_UTR 55.0%
GGATTCAGAGGTGGTCGTGA+TGG - chr7_2:67101063-67101082 Msa1070810:three_prime_UTR 55.0%
TTCAGAGGTGGTCGTGATGG+AGG - chr7_2:67101066-67101085 Msa1070810:three_prime_UTR 55.0%
!! CGTGATGGAGGAGGTTTTCG+TGG - chr7_2:67101078-67101097 Msa1070810:three_prime_UTR 55.0%
GAACCTACAACTTCGGAGGG+AGG + chr7_2:67101165-67101184 None:intergenic 55.0%
CCACGAACCTACAACTTCGG+AGG + chr7_2:67101169-67101188 None:intergenic 55.0%
CCTCCGAAGTTGTAGGTTCG+TGG - chr7_2:67101166-67101185 Msa1070810:exon 55.0%
GCTAGAGGCAAGAGCTTCCT+AGG + chr7_2:67101609-67101628 None:intergenic 55.0%
!! GAGAGGGTGTTAAGGAGAGG+TGG - chr7_2:67102169-67102188 Msa1070810:intron 55.0%
GGACAAGCATCAGGTGGTAG+AGG - chr7_2:67102562-67102581 Msa1070810:CDS 55.0%
CAAGCATCAGGTGGTAGAGG+TGG - chr7_2:67102565-67102584 Msa1070810:CDS 55.0%
!!! GGAGGTGGTGGTTTTGGTAG+AGG - chr7_2:67102595-67102614 Msa1070810:intron 55.0%
!!! GGTGGTGGTTTTGGTAGAGG+TGG - chr7_2:67102598-67102617 Msa1070810:intron 55.0%
!!! GGTGGTTTTGGTAGAGGTGG+TGG - chr7_2:67102601-67102620 Msa1070810:intron 55.0%
CACGAAAACCACCACCTCCA+CGG + chr7_2:67102627-67102646 None:intergenic 55.0%
!! GAGGTGGTGGTTTTCGTGGA+AGG - chr7_2:67102629-67102648 Msa1070810:intron 55.0%
!! GGTGGTGGTTTTCGTGGAAG+GGG - chr7_2:67102631-67102650 Msa1070810:intron 55.0%
!! TGGACGTGGTGGTGGTTTCA+GGG - chr7_2:67102687-67102706 Msa1070810:intron 55.0%
!! TGGTGGTGGTTTCAGGGGAA+GGG - chr7_2:67102693-67102712 Msa1070810:intron 55.0%
AGGGGAAGGGGCAGATTCTA+GGG - chr7_2:67102706-67102725 Msa1070810:intron 55.0%
ATGAGACCCCCTGCAAGAGG+TGG - chr7_2:67101003-67101022 Msa1070810:three_prime_UTR 60.0%
!! CGTGGTGGTGGATTCAGAGG+TGG - chr7_2:67101030-67101049 Msa1070810:three_prime_UTR 60.0%
GGATTCAGAGGTGGCCGAGA+TGG - chr7_2:67101039-67101058 Msa1070810:three_prime_UTR 60.0%
TTCAGAGGTGGCCGAGATGG+TGG - chr7_2:67101042-67101061 Msa1070810:three_prime_UTR 60.0%
!! GGCCGAGATGGTGGATTCAG+AGG - chr7_2:67101051-67101070 Msa1070810:three_prime_UTR 60.0%
! AGAGGTGGTCGTGATGGAGG+AGG - chr7_2:67101069-67101088 Msa1070810:three_prime_UTR 60.0%
! GGAGGAGGTTTTCGTGGACG+TGG - chr7_2:67101084-67101103 Msa1070810:three_prime_UTR 60.0%
! GGAGGTTTTCGTGGACGTGG+TGG - chr7_2:67101087-67101106 Msa1070810:three_prime_UTR 60.0%
! GGTTTTCGTGGACGTGGTGG+TGG - chr7_2:67101090-67101109 Msa1070810:three_prime_UTR 60.0%
!! GGACGTGGTGGTGGTCGATT+CGG - chr7_2:67101099-67101118 Msa1070810:three_prime_UTR 60.0%
GGACCTCCCTCCGAAGTTGT+AGG - chr7_2:67101159-67101178 Msa1070810:exon 60.0%
TGCAGGGGACAAGCATCAGG+TGG - chr7_2:67102556-67102575 Msa1070810:CDS 60.0%
GCATCAGGTGGTAGAGGTGG+AGG - chr7_2:67102568-67102587 Msa1070810:CDS 60.0%
! TTTGGTAGAGGTGGTGGCCG+TGG - chr7_2:67102607-67102626 Msa1070810:intron 60.0%
!! CGTGGAGGTGGTGGTTTTCG+TGG - chr7_2:67102625-67102644 Msa1070810:intron 60.0%
AGGACCTCTTCCACCCCTTG+GGG + chr7_2:67102659-67102678 None:intergenic 60.0%
GAGGACCTCTTCCACCCCTT+GGG + chr7_2:67102660-67102679 None:intergenic 60.0%
GGTGGAAGAGGTCCTCCAAG+AGG - chr7_2:67102664-67102683 Msa1070810:intron 60.0%
GGAAGAGGTCCTCCAAGAGG+TGG - chr7_2:67102667-67102686 Msa1070810:intron 60.0%
!! GTGGACGTGGTGGTGGTTTC+AGG - chr7_2:67102686-67102705 Msa1070810:intron 60.0%
!! GGACGTGGTGGTGGTTTCAG+GGG - chr7_2:67102688-67102707 Msa1070810:intron 60.0%
!! GTGGTGGTGGTTTCAGGGGA+AGG - chr7_2:67102692-67102711 Msa1070810:intron 60.0%
! GGTGGTGGTTTCAGGGGAAG+GGG - chr7_2:67102694-67102713 Msa1070810:intron 60.0%
CAGGGGAAGGGGCAGATTCT+AGG - chr7_2:67102705-67102724 Msa1070810:intron 60.0%
ATGAGACCCCCTGCAAGAGG+TGG - chr7_2:67101003-67101022 Msa1070810:three_prime_UTR 60.0%
!! CGTGGTGGTGGATTCAGAGG+TGG - chr7_2:67101030-67101049 Msa1070810:three_prime_UTR 60.0%
GGATTCAGAGGTGGCCGAGA+TGG - chr7_2:67101039-67101058 Msa1070810:three_prime_UTR 60.0%
TTCAGAGGTGGCCGAGATGG+TGG - chr7_2:67101042-67101061 Msa1070810:three_prime_UTR 60.0%
!! GGCCGAGATGGTGGATTCAG+AGG - chr7_2:67101051-67101070 Msa1070810:three_prime_UTR 60.0%
! AGAGGTGGTCGTGATGGAGG+AGG - chr7_2:67101069-67101088 Msa1070810:three_prime_UTR 60.0%
! GGAGGAGGTTTTCGTGGACG+TGG - chr7_2:67101084-67101103 Msa1070810:three_prime_UTR 60.0%
! GGAGGTTTTCGTGGACGTGG+TGG - chr7_2:67101087-67101106 Msa1070810:three_prime_UTR 60.0%
! GGTTTTCGTGGACGTGGTGG+TGG - chr7_2:67101090-67101109 Msa1070810:three_prime_UTR 60.0%
!! GGACGTGGTGGTGGTCGATT+CGG - chr7_2:67101099-67101118 Msa1070810:three_prime_UTR 60.0%
GGACCTCCCTCCGAAGTTGT+AGG - chr7_2:67101159-67101178 Msa1070810:exon 60.0%
TGCAGGGGACAAGCATCAGG+TGG - chr7_2:67102556-67102575 Msa1070810:CDS 60.0%
GCATCAGGTGGTAGAGGTGG+AGG - chr7_2:67102568-67102587 Msa1070810:CDS 60.0%
! TTTGGTAGAGGTGGTGGCCG+TGG - chr7_2:67102607-67102626 Msa1070810:intron 60.0%
!! CGTGGAGGTGGTGGTTTTCG+TGG - chr7_2:67102625-67102644 Msa1070810:intron 60.0%
AGGACCTCTTCCACCCCTTG+GGG + chr7_2:67102659-67102678 None:intergenic 60.0%
GAGGACCTCTTCCACCCCTT+GGG + chr7_2:67102660-67102679 None:intergenic 60.0%
GGTGGAAGAGGTCCTCCAAG+AGG - chr7_2:67102664-67102683 Msa1070810:intron 60.0%
GGAAGAGGTCCTCCAAGAGG+TGG - chr7_2:67102667-67102686 Msa1070810:intron 60.0%
!! GTGGACGTGGTGGTGGTTTC+AGG - chr7_2:67102686-67102705 Msa1070810:intron 60.0%
!! GGACGTGGTGGTGGTTTCAG+GGG - chr7_2:67102688-67102707 Msa1070810:intron 60.0%
!! GTGGTGGTGGTTTCAGGGGA+AGG - chr7_2:67102692-67102711 Msa1070810:intron 60.0%
! GGTGGTGGTTTCAGGGGAAG+GGG - chr7_2:67102694-67102713 Msa1070810:intron 60.0%
CAGGGGAAGGGGCAGATTCT+AGG - chr7_2:67102705-67102724 Msa1070810:intron 60.0%
AGACCCCCTGCAAGAGGTGG+CGG - chr7_2:67101006-67101025 Msa1070810:three_prime_UTR 65.0%
!! GGCCGTGGTGGTGGATTCAG+AGG - chr7_2:67101027-67101046 Msa1070810:three_prime_UTR 65.0%
!! CGTGGTGGTGGTCGATTCGG+CGG - chr7_2:67101102-67101121 Msa1070810:three_prime_UTR 65.0%
!! GGCCGTGGAGGTGGTGGTTT+TGG - chr7_2:67102589-67102608 Msa1070810:intron 65.0%
TTCGTGGAAGGGGTCCCCCA+AGG - chr7_2:67102641-67102660 Msa1070810:intron 65.0%
TCGTGGAAGGGGTCCCCCAA+GGG - chr7_2:67102642-67102661 Msa1070810:intron 65.0%
GGACCTCTTCCACCCCTTGG+GGG + chr7_2:67102658-67102677 None:intergenic 65.0%
GGAGGACCTCTTCCACCCCT+TGG + chr7_2:67102661-67102680 None:intergenic 65.0%
GGTCCTCCAAGAGGTGGACG+TGG - chr7_2:67102673-67102692 Msa1070810:intron 65.0%
CCACCACGTCCACCTCTTGG+AGG + chr7_2:67102679-67102698 None:intergenic 65.0%
CCTCCAAGAGGTGGACGTGG+TGG - chr7_2:67102676-67102695 Msa1070810:intron 65.0%
CCACCACCACGTCCACCTCT+TGG + chr7_2:67102682-67102701 None:intergenic 65.0%
CCAAGAGGTGGACGTGGTGG+TGG - chr7_2:67102679-67102698 Msa1070810:intron 65.0%
AGACCCCCTGCAAGAGGTGG+CGG - chr7_2:67101006-67101025 Msa1070810:three_prime_UTR 65.0%
!! GGCCGTGGTGGTGGATTCAG+AGG - chr7_2:67101027-67101046 Msa1070810:three_prime_UTR 65.0%
!! CGTGGTGGTGGTCGATTCGG+CGG - chr7_2:67101102-67101121 Msa1070810:three_prime_UTR 65.0%
!! GGCCGTGGAGGTGGTGGTTT+TGG - chr7_2:67102589-67102608 Msa1070810:intron 65.0%
TTCGTGGAAGGGGTCCCCCA+AGG - chr7_2:67102641-67102660 Msa1070810:intron 65.0%
TCGTGGAAGGGGTCCCCCAA+GGG - chr7_2:67102642-67102661 Msa1070810:intron 65.0%
GGACCTCTTCCACCCCTTGG+GGG + chr7_2:67102658-67102677 None:intergenic 65.0%
GGAGGACCTCTTCCACCCCT+TGG + chr7_2:67102661-67102680 None:intergenic 65.0%
GGTCCTCCAAGAGGTGGACG+TGG - chr7_2:67102673-67102692 Msa1070810:intron 65.0%
CCACCACGTCCACCTCTTGG+AGG + chr7_2:67102679-67102698 None:intergenic 65.0%
CCTCCAAGAGGTGGACGTGG+TGG - chr7_2:67102676-67102695 Msa1070810:intron 65.0%
CCACCACCACGTCCACCTCT+TGG + chr7_2:67102682-67102701 None:intergenic 65.0%
CCAAGAGGTGGACGTGGTGG+TGG - chr7_2:67102679-67102698 Msa1070810:intron 65.0%
ACGGCCGCCACCTCTTGCAG+GGG + chr7_2:67101013-67101032 None:intergenic 70.0%
CACGGCCGCCACCTCTTGCA+GGG + chr7_2:67101014-67101033 None:intergenic 70.0%
!! GGTGGTGGTCGATTCGGCGG+TGG - chr7_2:67101105-67101124 Msa1070810:three_prime_UTR 70.0%
!! GGTCGATTCGGCGGTGGACG+TGG - chr7_2:67101111-67101130 Msa1070810:three_prime_UTR 70.0%
! CGATTCGGCGGTGGACGTGG+TGG - chr7_2:67101114-67101133 Msa1070810:three_prime_UTR 70.0%
TTCGGCGGTGGACGTGGTGG+TGG - chr7_2:67101117-67101136 Msa1070810:three_prime_UTR 70.0%
!! GGTGGACGTGGTGGTGGAGG+TGG - chr7_2:67101123-67101142 Msa1070810:three_prime_UTR 70.0%
GGTGGTAGAGGTGGAGGCCG+TGG - chr7_2:67102574-67102593 Msa1070810:CDS 70.0%
GGTAGAGGTGGAGGCCGTGG+AGG - chr7_2:67102577-67102596 Msa1070810:CDS 70.0%
AGAGGTGGAGGCCGTGGAGG+TGG - chr7_2:67102580-67102599 Msa1070810:CDS 70.0%
! GGTAGAGGTGGTGGCCGTGG+AGG - chr7_2:67102610-67102629 Msa1070810:intron 70.0%
! AGAGGTGGTGGCCGTGGAGG+TGG - chr7_2:67102613-67102632 Msa1070810:intron 70.0%
CGTGGAAGGGGTCCCCCAAG+GGG - chr7_2:67102643-67102662 Msa1070810:intron 70.0%
GGTCCCCCAAGGGGTGGAAG+AGG - chr7_2:67102652-67102671 Msa1070810:intron 70.0%
ACGGCCGCCACCTCTTGCAG+GGG + chr7_2:67101013-67101032 None:intergenic 70.0%
CACGGCCGCCACCTCTTGCA+GGG + chr7_2:67101014-67101033 None:intergenic 70.0%
!! GGTGGTGGTCGATTCGGCGG+TGG - chr7_2:67101105-67101124 Msa1070810:three_prime_UTR 70.0%
!! GGTCGATTCGGCGGTGGACG+TGG - chr7_2:67101111-67101130 Msa1070810:three_prime_UTR 70.0%
! CGATTCGGCGGTGGACGTGG+TGG - chr7_2:67101114-67101133 Msa1070810:three_prime_UTR 70.0%
TTCGGCGGTGGACGTGGTGG+TGG - chr7_2:67101117-67101136 Msa1070810:three_prime_UTR 70.0%
!! GGTGGACGTGGTGGTGGAGG+TGG - chr7_2:67101123-67101142 Msa1070810:three_prime_UTR 70.0%
GGTGGTAGAGGTGGAGGCCG+TGG - chr7_2:67102574-67102593 Msa1070810:CDS 70.0%
GGTAGAGGTGGAGGCCGTGG+AGG - chr7_2:67102577-67102596 Msa1070810:CDS 70.0%
AGAGGTGGAGGCCGTGGAGG+TGG - chr7_2:67102580-67102599 Msa1070810:CDS 70.0%
! GGTAGAGGTGGTGGCCGTGG+AGG - chr7_2:67102610-67102629 Msa1070810:intron 70.0%
! AGAGGTGGTGGCCGTGGAGG+TGG - chr7_2:67102613-67102632 Msa1070810:intron 70.0%
CGTGGAAGGGGTCCCCCAAG+GGG - chr7_2:67102643-67102662 Msa1070810:intron 70.0%
GGTCCCCCAAGGGGTGGAAG+AGG - chr7_2:67102652-67102671 Msa1070810:intron 70.0%
CGGCCGCCACCTCTTGCAGG+GGG + chr7_2:67101012-67101031 None:intergenic 75.0%
CCACGGCCGCCACCTCTTGC+AGG + chr7_2:67101015-67101034 None:intergenic 75.0%
! CCTGCAAGAGGTGGCGGCCG+TGG - chr7_2:67101012-67101031 Msa1070810:three_prime_UTR 75.0%
! GCAAGAGGTGGCGGCCGTGG+TGG - chr7_2:67101015-67101034 Msa1070810:three_prime_UTR 75.0%
! AGAGGTGGCGGCCGTGGTGG+TGG - chr7_2:67101018-67101037 Msa1070810:three_prime_UTR 75.0%
!! GGCGGTGGACGTGGTGGTGG+AGG - chr7_2:67101120-67101139 Msa1070810:three_prime_UTR 75.0%
GGTGGAGGCCGTGGAGGTGG+TGG - chr7_2:67102583-67102602 Msa1070810:intron 75.0%
! GGTGGTGGCCGTGGAGGTGG+TGG - chr7_2:67102616-67102635 Msa1070810:intron 75.0%
GGAAGGGGTCCCCCAAGGGG+TGG - chr7_2:67102646-67102665 Msa1070810:intron 75.0%
CGGCCGCCACCTCTTGCAGG+GGG + chr7_2:67101012-67101031 None:intergenic 75.0%
CCACGGCCGCCACCTCTTGC+AGG + chr7_2:67101015-67101034 None:intergenic 75.0%
! CCTGCAAGAGGTGGCGGCCG+TGG - chr7_2:67101012-67101031 Msa1070810:three_prime_UTR 75.0%
! GCAAGAGGTGGCGGCCGTGG+TGG - chr7_2:67101015-67101034 Msa1070810:three_prime_UTR 75.0%
! AGAGGTGGCGGCCGTGGTGG+TGG - chr7_2:67101018-67101037 Msa1070810:three_prime_UTR 75.0%
!! GGCGGTGGACGTGGTGGTGG+AGG - chr7_2:67101120-67101139 Msa1070810:three_prime_UTR 75.0%
GGTGGAGGCCGTGGAGGTGG+TGG - chr7_2:67102583-67102602 Msa1070810:intron 75.0%
! GGTGGTGGCCGTGGAGGTGG+TGG - chr7_2:67102616-67102635 Msa1070810:intron 75.0%
GGAAGGGGTCCCCCAAGGGG+TGG - chr7_2:67102646-67102665 Msa1070810:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 67100905 67102991 67100905 ID=Msa1070810;Name=Msa1070810
chr7_2 mRNA 67100905 67102991 67100905 ID=Msa1070810-mRNA-1;Parent=Msa1070810;Name=Msa1070810-mRNA-1;_AED=0.02;_eAED=0.02;_QI=98|1|1|1|1|1|4|265|202
chr7_2 exon 67100905 67101335 67100905 ID=Msa1070810-mRNA-1:exon:14526;Parent=Msa1070810-mRNA-1
chr7_2 exon 67102247 67102362 67102247 ID=Msa1070810-mRNA-1:exon:14525;Parent=Msa1070810-mRNA-1
chr7_2 exon 67102452 67102600 67102452 ID=Msa1070810-mRNA-1:exon:14524;Parent=Msa1070810-mRNA-1
chr7_2 exon 67102716 67102991 67102716 ID=Msa1070810-mRNA-1:exon:14523;Parent=Msa1070810-mRNA-1
chr7_2 five_prime_UTR 67102894 67102991 67102894 ID=Msa1070810-mRNA-1:five_prime_utr;Parent=Msa1070810-mRNA-1
chr7_2 CDS 67102716 67102893 67102716 ID=Msa1070810-mRNA-1:cds;Parent=Msa1070810-mRNA-1
chr7_2 CDS 67102452 67102600 67102452 ID=Msa1070810-mRNA-1:cds;Parent=Msa1070810-mRNA-1
chr7_2 CDS 67102247 67102362 67102247 ID=Msa1070810-mRNA-1:cds;Parent=Msa1070810-mRNA-1
chr7_2 CDS 67101170 67101335 67101170 ID=Msa1070810-mRNA-1:cds;Parent=Msa1070810-mRNA-1
chr7_2 three_prime_UTR 67100905 67101169 67100905 ID=Msa1070810-mRNA-1:three_prime_utr;Parent=Msa1070810-mRNA-1
Gene Sequence

>Msa1070810

ATGAGACCCCCTGCAAGAGGTGGCGGCCGTGGTGGTGGATTCAGAGGTGGCCGAGATGGTGGATTCAGAGGTGGTCGTGATGGAGGAGGTTTTCGTGGACGTGGTGGTGGTCGATTCGGCGGTGGACGTGGTGGTGGAGGTGGATTTCGTGATGAAGGACCTCCCTCCGAAGTTGTAGAGGTTTCAACGTTTATCCATGCTTGTGAAGGAGATGCTGTTACAAAGCTTACCAATGAGAAAATTCCATTTTTTAATGCTCCTATTTATCTGCAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGTCCCATCAATGAATCTTACTTTTCTATTAAAATGATGGAAGGGATTGTTGCTACTTCATATGCATCTGGTGACAAGTTTTACATTGACCCTAGGAAGCTCTTGCCTCTAGCAAGATTTCTTCCTCAGCCGAAGGGACAAGCATCAGGTGGTAGAGGTGGAGGCCGTGGAGGTGGTGGTTTTGGTAGAGGTGGTGGCCGTGGAGGTGGTGGTTTTCGTGGAAGGGGTCCCCCAAGGGGTGGAAGAGGTCCTCCAAGAGGTGGACGTGGTGGTGGTTTCAGGGGAAGGGGCAGATTCTAG

Protein sequence

>Msa1070810

MRPPARGGGRGGGFRGGRDGGFRGGRDGGGFRGRGGGRFGGGRGGGGGFRDEGPPSEVVEVSTFIHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIVATSYASGDKFYIDPRKLLPLARFLPQPKGQASGGRGGGRGGGGFGRGGGRGGGGFRGRGPPRGGRGPPRGGRGGGFRGRGRF*